NUP50 (Nucleoporin 50 kDa)
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0337331 RchiOBHm_Chr5g0055681 |
| rosa_multiflora | Rmu_co8012122.1_g000001 Rmu_sc0001782.1_g000051 Rmu_sc0006656.1_g000002 Rmu_sc0007310.1_g000007 Rmu_sc0007479.1_g000005 Rmu_sc0009401.1_g000001 Rmu_sc0035419.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00290660 |
| rosa_samantha | Rh2AG367000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 62 |
| AciI | CCGC | 1 cut(s) | 213 |
| AcuI | CTGAAG | 1 cut(s) | 247 |
| AfaI | GTAC | 1 cut(s) | 224 |
| AgsI | TTSAA | 4 cut(s) | 42, 64, 242, 338 |
| AjnI | CCWGG | 1 cut(s) | 21 |
| AluBI | AGCT | 2 cut(s) | 257, 364 |
| AluI | AGCT | 2 cut(s) | 257, 364 |
| Alw26I | GTCTC | 2 cut(s) | 129, 147 |
| AspS9I | GGNCC | 1 cut(s) | 215 |
| AsuHPI | GGTGA | 1 cut(s) | 162 |
| AvaII | GGWCC | 1 cut(s) | 215 |
| BbsI | GAAGAC | 1 cut(s) | 177 |
| BbvCI | CCTCAGC | 1 cut(s) | 86 |
| BccI | CCATC | 3 cut(s) | 86, 141, 336 |
| BciT130I | CCWGG | 1 cut(s) | 23 |
| BcoDI | GTCTC | 2 cut(s) | 129, 147 |
| BfaI | CTAG | 1 cut(s) | 298 |
| BfuAI | ACCTGC | 1 cut(s) | 62 |
| BmcAI | AGTACT | 1 cut(s) | 224 |
| Bme1390I | CCNGG | 1 cut(s) | 23 |
| Bme18I | GGWCC | 1 cut(s) | 215 |
| BmgT120I | GGNCC | 1 cut(s) | 215 |
| BmiI | GGNNCC | 2 cut(s) | 76, 217 |
| BmrFI | CCNGG | 1 cut(s) | 23 |
| BmsI | GCATC | 2 cut(s) | 18, 111 |
| BpiI | GAAGAC | 1 cut(s) | 177 |
| Bpu10I | CCTNAGC | 2 cut(s) | 86, 365 |
| BsaI | GGTCTC | 1 cut(s) | 147 |
| BsaJI | CCNNGG | 1 cut(s) | 21 |
| BsaWI | WCCGGW | 1 cut(s) | 156 |
| BseBI | CCWGG | 1 cut(s) | 23 |
| BseDI | CCNNGG | 1 cut(s) | 21 |
| BseGI | GGATG | 2 cut(s) | 17, 347 |
| BseMII | CTCAG | 2 cut(s) | 100, 379 |
| BsgI | GTGCAG | 1 cut(s) | 90 |
| BsiSI | CCGG | 1 cut(s) | 157 |
| BsmAI | GTCTC | 2 cut(s) | 129, 147 |
| Bso31I | GGTCTC | 1 cut(s) | 147 |
| BspACI | CCGC | 1 cut(s) | 213 |
| BspCNI | CTCAG | 2 cut(s) | 99, 378 |
| BspLI | GGNNCC | 2 cut(s) | 76, 217 |
| BspMI | ACCTGC | 1 cut(s) | 62 |
| BspTNI | GGTCTC | 1 cut(s) | 147 |
| BssECI | CCNNGG | 1 cut(s) | 21 |
| Bst2UI | CCWGG | 1 cut(s) | 23 |
| Bst4CI | ACNGT | 3 cut(s) | 68, 95, 140 |
| Bst6I | CTCTTC | 1 cut(s) | 178 |
| BstDEI | CTNAG | 2 cut(s) | 86, 365 |
| BstF5I | GGATG | 2 cut(s) | 17, 347 |
| BstMAI | GTCTC | 2 cut(s) | 129, 147 |
| BstNI | CCWGG | 1 cut(s) | 23 |
| BstSCI | CCNGG | 1 cut(s) | 21 |
| BstV2I | GAAGAC | 1 cut(s) | 177 |
| BtsCI | GGATG | 2 cut(s) | 17, 347 |
| BveI | ACCTGC | 1 cut(s) | 62 |
| Cfr13I | GGNCC | 1 cut(s) | 215 |
| Csp6I | GTAC | 1 cut(s) | 223 |
| CviAII | CATG | 1 cut(s) | 116 |
| CviJI | RGCY | 5 cut(s) | 90, 257, 329, 364, 370 |
| CviKI_1 | RGCY | 5 cut(s) | 90, 257, 329, 364, 370 |
| CviQI | GTAC | 1 cut(s) | 223 |
| DdeI | CTNAG | 2 cut(s) | 86, 365 |
| Eam1104I | CTCTTC | 1 cut(s) | 178 |
| EarI | CTCTTC | 1 cut(s) | 178 |
| Eco31I | GGTCTC | 1 cut(s) | 147 |
| Eco47I | GGWCC | 1 cut(s) | 215 |
| Eco57I | CTGAAG | 1 cut(s) | 247 |
| EcoRII | CCWGG | 1 cut(s) | 21 |
| FaeI | CATG | 1 cut(s) | 119 |
| FaiI | YATR | 2 cut(s) | 30, 117 |
| FatI | CATG | 1 cut(s) | 115 |
| FokI | GGATG | 2 cut(s) | 4, 354 |
| FspBI | CTAG | 1 cut(s) | 298 |
| HapII | CCGG | 1 cut(s) | 157 |
| Hin1II | CATG | 1 cut(s) | 119 |
| HindIII | AAGCTT | 1 cut(s) | 255 |
| HinfI | GANTC | 1 cut(s) | 381 |
| HpaII | CCGG | 1 cut(s) | 157 |
| HphI | GGTGA | 1 cut(s) | 162 |
| Hpy188I | TCNGA | 1 cut(s) | 253 |
| Hpy188III | TCNNGA | 1 cut(s) | 292 |
| HpyAV | CCTTC | 3 cut(s) | 222, 287, 410 |
| HpyCH4III | ACNGT | 3 cut(s) | 68, 95, 140 |
| HpyCH4V | TGCA | 3 cut(s) | 9, 71, 351 |
| HpyF3I | CTNAG | 2 cut(s) | 86, 365 |
| Hsp92II | CATG | 1 cut(s) | 119 |
| LpnPI | CCDG | 7 cut(s) | 8, 35, 57, 170, 277, 352, 389 |
| LweI | GCATC | 2 cut(s) | 18, 111 |
| MaeI | CTAG | 1 cut(s) | 298 |
| MaeIII | GTNAC | 2 cut(s) | 140, 233 |
| MboII | GAAGA | 4 cut(s) | 54, 73, 182, 195 |
| MlyI | GAGTC | 1 cut(s) | 390 |
| MnlI | CCTC | 2 cut(s) | 95, 349 |
| MseI | TTAA | 1 cut(s) | 130 |
| MspI | CCGG | 1 cut(s) | 157 |
| MspR9I | CCNGG | 1 cut(s) | 23 |
| MvaI | CCWGG | 1 cut(s) | 23 |
| NlaIII | CATG | 1 cut(s) | 119 |
| NlaIV | GGNNCC | 2 cut(s) | 76, 217 |
| NmuCI | GTSAC | 1 cut(s) | 233 |
| PleI | GAGTC | 1 cut(s) | 389 |
| PpsI | GAGTC | 1 cut(s) | 389 |
| Psp6I | CCWGG | 1 cut(s) | 21 |
| PspGI | CCWGG | 1 cut(s) | 21 |
| PspN4I | GGNNCC | 2 cut(s) | 76, 217 |
| PspPI | GGNCC | 1 cut(s) | 215 |
| RsaI | GTAC | 1 cut(s) | 224 |
| RsaNI | GTAC | 1 cut(s) | 223 |
| SaqAI | TTAA | 1 cut(s) | 130 |
| Sau96I | GGNCC | 1 cut(s) | 215 |
| ScaI | AGTACT | 1 cut(s) | 224 |
| SchI | GAGTC | 1 cut(s) | 390 |
| ScrFI | CCNGG | 1 cut(s) | 23 |
| SetI | ASST | 7 cut(s) | 7, 27, 76, 233, 259, 303, 366 |
| SfaNI | GCATC | 2 cut(s) | 18, 111 |
| SinI | GGWCC | 1 cut(s) | 215 |
| SsiI | CCGC | 1 cut(s) | 213 |
| SspMI | CTAG | 1 cut(s) | 298 |
| StyD4I | CCNGG | 1 cut(s) | 21 |
| TaaI | ACNGT | 3 cut(s) | 68, 95, 140 |
| TaqI | TCGA | 1 cut(s) | 261 |
| TatI | WGTACW | 1 cut(s) | 222 |
| Tru1I | TTAA | 1 cut(s) | 130 |
| Tru9I | TTAA | 1 cut(s) | 130 |
| TseFI | GTSAC | 1 cut(s) | 233 |
| Tsp45I | GTSAC | 1 cut(s) | 233 |
| TspDTI | ATGAA | 2 cut(s) | 196, 220 |
| VpaK11BI | GGWCC | 1 cut(s) | 215 |
| XspI | CTAG | 1 cut(s) | 298 |
| ZrmI | AGTACT | 1 cut(s) | 224 |