NUP50 (Nucleoporin 50 kDa)
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0337331 RchiOBHm_Chr5g0055681 |
| rosa_multiflora | Rmu_co8012122.1_g000001 Rmu_sc0001782.1_g000051 Rmu_sc0006656.1_g000002 Rmu_sc0007310.1_g000007 Rmu_sc0007479.1_g000005 Rmu_sc0009401.1_g000001 Rmu_sc0035419.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00290660 |
| rosa_samantha | Rh2AG367000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 258 |
| AciI | CCGC | 1 cut(s) | 275 |
| AclWI | GGATC | 1 cut(s) | 245 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 110, 225 |
| AgsI | TTSAA | 1 cut(s) | 124 |
| AluBI | AGCT | 5 cut(s) | 139, 246, 284, 350, 359 |
| AluI | AGCT | 5 cut(s) | 139, 246, 284, 350, 359 |
| Alw26I | GTCTC | 2 cut(s) | 14, 32 |
| AlwI | GGATC | 1 cut(s) | 245 |
| AsuHPI | GGTGA | 1 cut(s) | 377 |
| BbsI | GAAGAC | 1 cut(s) | 62 |
| BccI | CCATC | 1 cut(s) | 304 |
| BceAI | ACGGC | 1 cut(s) | 388 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 343, 377 |
| BcoDI | GTCTC | 2 cut(s) | 14, 32 |
| BfmI | CTRYAG | 1 cut(s) | 96 |
| BmrI | ACTGGG | 1 cut(s) | 189 |
| BmuI | ACTGGG | 1 cut(s) | 189 |
| BpiI | GAAGAC | 1 cut(s) | 62 |
| BsaI | GGTCTC | 1 cut(s) | 32 |
| BsaJI | CCNNGG | 1 cut(s) | 370 |
| BsaWI | WCCGGW | 1 cut(s) | 41 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 110, 225 |
| Bse1I | ACTGG | 1 cut(s) | 184 |
| BseDI | CCNNGG | 1 cut(s) | 370 |
| BseGI | GGATG | 1 cut(s) | 315 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 110, 225 |
| BseMII | CTCAG | 2 cut(s) | 261, 291 |
| BseNI | ACTGG | 1 cut(s) | 184 |
| BseRI | GAGGAG | 1 cut(s) | 253 |
| Bsh1236I | CGCG | 1 cut(s) | 258 |
| BsiSI | CCGG | 1 cut(s) | 42 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 110, 225 |
| BsmAI | GTCTC | 2 cut(s) | 14, 32 |
| Bso31I | GGTCTC | 1 cut(s) | 32 |
| Bsp143I | GATC | 2 cut(s) | 250, 321 |
| BspACI | CCGC | 1 cut(s) | 275 |
| BspCNI | CTCAG | 2 cut(s) | 260, 292 |
| BspFNI | CGCG | 1 cut(s) | 258 |
| BspMAI | CTGCAG | 1 cut(s) | 100 |
| BspPI | GGATC | 1 cut(s) | 245 |
| BspTNI | GGTCTC | 1 cut(s) | 32 |
| BsrI | ACTGG | 1 cut(s) | 184 |
| BssECI | CCNNGG | 1 cut(s) | 370 |
| BssMI | GATC | 2 cut(s) | 250, 321 |
| Bst4CI | ACNGT | 1 cut(s) | 25 |
| Bst6I | CTCTTC | 1 cut(s) | 68 |
| BstC8I | GCNNGC | 1 cut(s) | 352 |
| BstDEI | CTNAG | 2 cut(s) | 247, 300 |
| BstDSI | CCRYGG | 1 cut(s) | 370 |
| BstEII | GGTNACC | 1 cut(s) | 365 |
| BstF5I | GGATG | 1 cut(s) | 315 |
| BstFNI | CGCG | 1 cut(s) | 258 |
| BstKTI | GATC | 2 cut(s) | 253, 324 |
| BstMAI | GTCTC | 2 cut(s) | 14, 32 |
| BstMBI | GATC | 2 cut(s) | 250, 321 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 356 |
| BstPI | GGTNACC | 1 cut(s) | 365 |
| BstSFI | CTRYAG | 1 cut(s) | 96 |
| BstUI | CGCG | 1 cut(s) | 258 |
| BstV2I | GAAGAC | 1 cut(s) | 62 |
| BstX2I | RGATCY | 1 cut(s) | 250 |
| BstYI | RGATCY | 1 cut(s) | 250 |
| BtgI | CCRYGG | 1 cut(s) | 370 |
| BtgZI | GCGATG | 1 cut(s) | 280 |
| BtsCI | GGATG | 1 cut(s) | 315 |
| Cac8I | GCNNGC | 1 cut(s) | 352 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 243, 278 |
| CviJI | RGCY | 7 cut(s) | 139, 150, 211, 246, 284, 350, 359 |
| CviKI_1 | RGCY | 7 cut(s) | 139, 150, 211, 246, 284, 350, 359 |
| DdeI | CTNAG | 2 cut(s) | 247, 300 |
| DpnI | GATC | 2 cut(s) | 252, 323 |
| DpnII | GATC | 2 cut(s) | 250, 321 |
| Eam1104I | CTCTTC | 1 cut(s) | 68 |
| EarI | CTCTTC | 1 cut(s) | 68 |
| Eco31I | GGTCTC | 1 cut(s) | 32 |
| Eco91I | GGTNACC | 1 cut(s) | 365 |
| EcoO65I | GGTNACC | 1 cut(s) | 365 |
| FaiI | YATR | 2 cut(s) | 110, 225 |
| FauI | CCCGC | 1 cut(s) | 282 |
| FokI | GGATG | 1 cut(s) | 322 |
| HapII | CCGG | 1 cut(s) | 42 |
| HincII | GTYRAC | 1 cut(s) | 334 |
| HindII | GTYRAC | 1 cut(s) | 334 |
| HindIII | AAGCTT | 1 cut(s) | 137 |
| HinfI | GANTC | 2 cut(s) | 265, 394 |
| HpaII | CCGG | 1 cut(s) | 42 |
| HphI | GGTGA | 1 cut(s) | 377 |
| Hpy166II | GTNNAC | 1 cut(s) | 334 |
| Hpy188I | TCNGA | 2 cut(s) | 135, 250 |
| Hpy188III | TCNNGA | 1 cut(s) | 174 |
| Hpy8I | GTNNAC | 1 cut(s) | 334 |
| HpyAV | CCTTC | 1 cut(s) | 169 |
| HpyCH4III | ACNGT | 1 cut(s) | 25 |
| HpyCH4V | TGCA | 3 cut(s) | 98, 233, 354 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 356 |
| HpyF3I | CTNAG | 2 cut(s) | 247, 300 |
| Kzo9I | GATC | 2 cut(s) | 250, 321 |
| LmnI | GCTCC | 1 cut(s) | 289 |
| LpnPI | CCDG | 5 cut(s) | 55, 159, 165, 314, 332 |
| MaeIII | GTNAC | 3 cut(s) | 25, 115, 365 |
| MalI | GATC | 2 cut(s) | 252, 323 |
| MboI | GATC | 2 cut(s) | 250, 321 |
| MboII | GAAGA | 3 cut(s) | 67, 85, 94 |
| MflI | RGATCY | 1 cut(s) | 250 |
| MlyI | GAGTC | 2 cut(s) | 259, 388 |
| MnlI | CCTC | 2 cut(s) | 231, 298 |
| MseI | TTAA | 1 cut(s) | 400 |
| MspI | CCGG | 1 cut(s) | 42 |
| MvnI | CGCG | 1 cut(s) | 258 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 356 |
| NdeII | GATC | 2 cut(s) | 250, 321 |
| NmuCI | GTSAC | 2 cut(s) | 115, 365 |
| PleI | GAGTC | 2 cut(s) | 259, 388 |
| PpsI | GAGTC | 2 cut(s) | 259, 388 |
| PspEI | GGTNACC | 1 cut(s) | 365 |
| PstI | CTGCAG | 1 cut(s) | 100 |
| PsuI | RGATCY | 1 cut(s) | 250 |
| SaqAI | TTAA | 1 cut(s) | 400 |
| Sau3AI | GATC | 2 cut(s) | 250, 321 |
| SchI | GAGTC | 2 cut(s) | 259, 388 |
| SetI | ASST | 7 cut(s) | 115, 141, 248, 286, 321, 352, 361 |
| SfcI | CTRYAG | 1 cut(s) | 96 |
| SsiI | CCGC | 1 cut(s) | 275 |
| SspI | AATATT | 1 cut(s) | 49 |
| TaaI | ACNGT | 1 cut(s) | 25 |
| Tru1I | TTAA | 1 cut(s) | 400 |
| Tru9I | TTAA | 1 cut(s) | 400 |
| TseFI | GTSAC | 2 cut(s) | 115, 365 |
| Tsp45I | GTSAC | 2 cut(s) | 115, 365 |
| TspDTI | ATGAA | 1 cut(s) | 105 |
| TspGWI | ACGGA | 1 cut(s) | 280 |