NUP50 (Nucleoporin 50 kDa)
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0337331 RchiOBHm_Chr5g0055681 |
| rosa_multiflora | Rmu_co8012122.1_g000001 Rmu_sc0001782.1_g000051 Rmu_sc0006656.1_g000002 Rmu_sc0007310.1_g000007 Rmu_sc0007479.1_g000005 Rmu_sc0009401.1_g000001 Rmu_sc0035419.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00290660 |
| rosa_samantha | Rh2AG367000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 119, 402 |
| AccI | GTMKAC | 1 cut(s) | 311 |
| AciI | CCGC | 1 cut(s) | 163 |
| AcoI | YGGCCR | 1 cut(s) | 145 |
| AcyI | GRCGYC | 1 cut(s) | 443 |
| AgsI | TTSAA | 2 cut(s) | 120, 205 |
| AluBI | AGCT | 2 cut(s) | 51, 220 |
| AluI | AGCT | 2 cut(s) | 51, 220 |
| Alw26I | GTCTC | 1 cut(s) | 182 |
| AoxI | GGCC | 1 cut(s) | 145 |
| ApeKI | GCWGC | 1 cut(s) | 217 |
| AseI | ATTAAT | 1 cut(s) | 183 |
| AspA2I | CCTAGG | 1 cut(s) | 76 |
| AspS9I | GGNCC | 1 cut(s) | 414 |
| AvaII | GGWCC | 1 cut(s) | 414 |
| AvrII | CCTAGG | 1 cut(s) | 76 |
| BbvI | GCAGC | 1 cut(s) | 229 |
| BccI | CCATC | 1 cut(s) | 91 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 400, 434 |
| BcoDI | GTCTC | 1 cut(s) | 182 |
| BfaI | CTAG | 4 cut(s) | 77, 261, 365, 434 |
| BfuAI | ACCTGC | 2 cut(s) | 119, 402 |
| BisI | GCNGC | 1 cut(s) | 218 |
| BlnI | CCTAGG | 1 cut(s) | 76 |
| BlsI | GCNGC | 1 cut(s) | 219 |
| Bme18I | GGWCC | 1 cut(s) | 414 |
| BmgT120I | GGNCC | 1 cut(s) | 414 |
| BmiI | GGNNCC | 1 cut(s) | 133 |
| BmsI | GCATC | 2 cut(s) | 73, 168 |
| BsaHI | GRCGYC | 1 cut(s) | 443 |
| BsaJI | CCNNGG | 3 cut(s) | 76, 142, 300 |
| Bse3DI | GCAATG | 3 cut(s) | 59, 118, 401 |
| BseDI | CCNNGG | 3 cut(s) | 76, 142, 300 |
| BseGI | GGATG | 4 cut(s) | 64, 72, 159, 310 |
| BseMI | GCAATG | 3 cut(s) | 59, 118, 401 |
| BseXI | GCAGC | 1 cut(s) | 229 |
| BsgI | GTGCAG | 1 cut(s) | 147 |
| BshFI | GGCC | 1 cut(s) | 147 |
| BsmAI | GTCTC | 1 cut(s) | 182 |
| BsnI | GGCC | 1 cut(s) | 147 |
| Bsp143I | GATC | 2 cut(s) | 69, 421 |
| BspACI | CCGC | 1 cut(s) | 163 |
| BspANI | GGCC | 1 cut(s) | 147 |
| BspLI | GGNNCC | 1 cut(s) | 133 |
| BspMI | ACCTGC | 2 cut(s) | 119, 402 |
| BsrDI | GCAATG | 3 cut(s) | 59, 118, 401 |
| BssECI | CCNNGG | 3 cut(s) | 76, 142, 300 |
| BssMI | GATC | 2 cut(s) | 69, 421 |
| BssNI | GRCGYC | 1 cut(s) | 443 |
| BssT1I | CCWWGG | 2 cut(s) | 76, 300 |
| Bst4CI | ACNGT | 1 cut(s) | 34 |
| BstACI | GRCGYC | 1 cut(s) | 443 |
| BstDEI | CTNAG | 1 cut(s) | 47 |
| BstF5I | GGATG | 4 cut(s) | 64, 72, 159, 310 |
| BstKTI | GATC | 2 cut(s) | 72, 424 |
| BstMAI | GTCTC | 1 cut(s) | 182 |
| BstMBI | GATC | 2 cut(s) | 69, 421 |
| BstV1I | GCAGC | 1 cut(s) | 229 |
| BsuRI | GGCC | 1 cut(s) | 147 |
| BtsCI | GGATG | 4 cut(s) | 64, 72, 159, 310 |
| BveI | ACCTGC | 2 cut(s) | 119, 402 |
| Cfr13I | GGNCC | 1 cut(s) | 414 |
| CviAII | CATG | 1 cut(s) | 172 |
| CviJI | RGCY | 7 cut(s) | 41, 51, 147, 220, 231, 327, 361 |
| CviKI_1 | RGCY | 7 cut(s) | 41, 51, 147, 220, 231, 327, 361 |
| DdeI | CTNAG | 1 cut(s) | 47 |
| DpnI | GATC | 2 cut(s) | 71, 423 |
| DpnII | GATC | 2 cut(s) | 69, 421 |
| EaeI | YGGCCR | 1 cut(s) | 145 |
| Eco130I | CCWWGG | 2 cut(s) | 76, 300 |
| Eco47I | GGWCC | 1 cut(s) | 414 |
| EcoO109I | RGGNCCY | 1 cut(s) | 414 |
| EcoT14I | CCWWGG | 2 cut(s) | 76, 300 |
| ErhI | CCWWGG | 2 cut(s) | 76, 300 |
| FaeI | CATG | 1 cut(s) | 175 |
| FaiI | YATR | 1 cut(s) | 173 |
| FatI | CATG | 1 cut(s) | 171 |
| FblI | GTMKAC | 1 cut(s) | 311 |
| Fnu4HI | GCNGC | 1 cut(s) | 218 |
| FokI | GGATG | 4 cut(s) | 51, 59, 146, 317 |
| Fsp4HI | GCNGC | 1 cut(s) | 218 |
| FspBI | CTAG | 4 cut(s) | 77, 261, 365, 434 |
| GluI | GCNGC | 1 cut(s) | 218 |
| HaeIII | GGCC | 1 cut(s) | 147 |
| Hin1I | GRCGYC | 1 cut(s) | 443 |
| Hin1II | CATG | 1 cut(s) | 175 |
| HinfI | GANTC | 1 cut(s) | 344 |
| Hpy166II | GTNNAC | 2 cut(s) | 312, 335 |
| Hpy188I | TCNGA | 2 cut(s) | 69, 257 |
| Hpy8I | GTNNAC | 2 cut(s) | 312, 335 |
| HpyAV | CCTTC | 3 cut(s) | 185, 250, 427 |
| HpyCH4III | ACNGT | 1 cut(s) | 34 |
| HpyCH4IV | ACGT | 1 cut(s) | 390 |
| HpyCH4V | TGCA | 2 cut(s) | 64, 128 |
| HpyF3I | CTNAG | 1 cut(s) | 47 |
| HpySE526I | ACGT | 1 cut(s) | 390 |
| Hsp92I | GRCGYC | 1 cut(s) | 443 |
| Hsp92II | CATG | 1 cut(s) | 175 |
| Kzo9I | GATC | 2 cut(s) | 69, 421 |
| LmnI | GCTCC | 1 cut(s) | 100 |
| LpnPI | CCDG | 3 cut(s) | 114, 315, 397 |
| Lsp1109I | GCAGC | 1 cut(s) | 229 |
| LweI | GCATC | 2 cut(s) | 73, 168 |
| MaeI | CTAG | 4 cut(s) | 77, 261, 365, 434 |
| MaeII | ACGT | 1 cut(s) | 390 |
| MaeIII | GTNAC | 2 cut(s) | 196, 439 |
| MalI | GATC | 2 cut(s) | 71, 423 |
| MboI | GATC | 2 cut(s) | 69, 421 |
| MboII | GAAGA | 2 cut(s) | 242, 386 |
| MfeI | CAATTG | 1 cut(s) | 425 |
| MluCI | AATT | 3 cut(s) | 9, 184, 425 |
| MlyI | GAGTC | 1 cut(s) | 353 |
| MnlI | CCTC | 1 cut(s) | 152 |
| MseI | TTAA | 3 cut(s) | 12, 183, 451 |
| MunI | CAATTG | 1 cut(s) | 425 |
| NdeII | GATC | 2 cut(s) | 69, 421 |
| NlaIII | CATG | 1 cut(s) | 175 |
| NlaIV | GGNNCC | 1 cut(s) | 133 |
| NmeAIII | GCCGAG | 3 cut(s) | 32, 123, 337 |
| NmuCI | GTSAC | 2 cut(s) | 196, 439 |
| PkrI | GCNGC | 1 cut(s) | 219 |
| PleI | GAGTC | 1 cut(s) | 352 |
| PpsI | GAGTC | 1 cut(s) | 352 |
| PpuMI | RGGWCCY | 1 cut(s) | 414 |
| PshBI | ATTAAT | 1 cut(s) | 183 |
| Psp5II | RGGWCCY | 1 cut(s) | 414 |
| PspN4I | GGNNCC | 1 cut(s) | 133 |
| PspPI | GGNCC | 1 cut(s) | 414 |
| PspPPI | RGGWCCY | 1 cut(s) | 414 |
| SaqAI | TTAA | 3 cut(s) | 12, 183, 451 |
| SatI | GCNGC | 1 cut(s) | 218 |
| Sau3AI | GATC | 2 cut(s) | 69, 421 |
| Sau96I | GGNCC | 1 cut(s) | 414 |
| SchI | GAGTC | 1 cut(s) | 353 |
| SfaNI | GCATC | 2 cut(s) | 73, 168 |
| SinI | GGWCC | 1 cut(s) | 414 |
| Sse9I | AATT | 3 cut(s) | 9, 184, 425 |
| SsiI | CCGC | 1 cut(s) | 163 |
| SspMI | CTAG | 4 cut(s) | 77, 261, 365, 434 |
| StyI | CCWWGG | 2 cut(s) | 76, 300 |
| TaaI | ACNGT | 1 cut(s) | 34 |
| TaiI | ACGT | 1 cut(s) | 393 |
| TaqI | TCGA | 1 cut(s) | 420 |
| TasI | AATT | 3 cut(s) | 9, 184, 425 |
| Tru1I | TTAA | 3 cut(s) | 12, 183, 451 |
| Tru9I | TTAA | 3 cut(s) | 12, 183, 451 |
| TseFI | GTSAC | 2 cut(s) | 196, 439 |
| TseI | GCWGC | 1 cut(s) | 217 |
| Tsp45I | GTSAC | 2 cut(s) | 196, 439 |
| VpaK11BI | GGWCC | 1 cut(s) | 414 |
| VspI | ATTAAT | 1 cut(s) | 183 |
| XmaJI | CCTAGG | 1 cut(s) | 76 |
| XmiI | GTMKAC | 1 cut(s) | 311 |
| XspI | CTAG | 4 cut(s) | 77, 261, 365, 434 |