Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD12G1014600.v1.1 |
| pyrus_communis | pycom09g03040 |
| rosa_laevigata | RLG00000022607 RLG00000031132 |
| rosa_multiflora | Rmu_co8050928.1_g000001 Rmu_sc0015572.1_g000004 |
| rosa_roxburghii | Rroxscaffold_4G00278050 |
| rosa_samantha | Rh2AG543300 Rh2CG525300 Rh2CG526100 Rh5DG543300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfaI | GTAC | 1 cut(s) | 39 |
| AgsI | TTSAA | 1 cut(s) | 250 |
| AluBI | AGCT | 2 cut(s) | 55, 69 |
| AluI | AGCT | 2 cut(s) | 55, 69 |
| Alw21I | GWGCWC | 1 cut(s) | 270 |
| AoxI | GGCC | 1 cut(s) | 231 |
| ApeKI | GCWGC | 2 cut(s) | 26, 29 |
| AsuHPI | GGTGA | 1 cut(s) | 213 |
| Bbv12I | GWGCWC | 1 cut(s) | 270 |
| BbvI | GCAGC | 2 cut(s) | 13, 41 |
| BccI | CCATC | 1 cut(s) | 128 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 179, 213 |
| BfmI | CTRYAG | 1 cut(s) | 27 |
| BisI | GCNGC | 2 cut(s) | 27, 30 |
| BlsI | GCNGC | 2 cut(s) | 28, 31 |
| BpuEI | CTTGAG | 1 cut(s) | 175 |
| BsaJI | CCNNGG | 1 cut(s) | 13 |
| BsaWI | WCCGGW | 1 cut(s) | 272 |
| BseDI | CCNNGG | 1 cut(s) | 13 |
| BseXI | GCAGC | 2 cut(s) | 13, 41 |
| BshFI | GGCC | 1 cut(s) | 233 |
| BsiHKAI | GWGCWC | 1 cut(s) | 270 |
| BsiSI | CCGG | 1 cut(s) | 273 |
| BsnI | GGCC | 1 cut(s) | 233 |
| Bsp1286I | GDGCHC | 1 cut(s) | 270 |
| BspANI | GGCC | 1 cut(s) | 233 |
| BspMAI | CTGCAG | 1 cut(s) | 31 |
| BssECI | CCNNGG | 1 cut(s) | 13 |
| BssT1I | CCWWGG | 1 cut(s) | 13 |
| Bst4CI | ACNGT | 1 cut(s) | 254 |
| Bst6I | CTCTTC | 1 cut(s) | 186 |
| BstSFI | CTRYAG | 1 cut(s) | 27 |
| BstV1I | GCAGC | 2 cut(s) | 13, 41 |
| BsuRI | GGCC | 1 cut(s) | 233 |
| BtsIMutI | CAGTG | 1 cut(s) | 259 |
| Csp6I | GTAC | 1 cut(s) | 38 |
| CviJI | RGCY | 6 cut(s) | 18, 26, 55, 69, 233, 262 |
| CviKI_1 | RGCY | 6 cut(s) | 18, 26, 55, 69, 233, 262 |
| CviQI | GTAC | 1 cut(s) | 38 |
| Eam1104I | CTCTTC | 1 cut(s) | 186 |
| EarI | CTCTTC | 1 cut(s) | 186 |
| Eco130I | CCWWGG | 1 cut(s) | 13 |
| Eco32I | GATATC | 1 cut(s) | 9 |
| EcoRV | GATATC | 1 cut(s) | 9 |
| EcoT14I | CCWWGG | 1 cut(s) | 13 |
| ErhI | CCWWGG | 1 cut(s) | 13 |
| FaiI | YATR | 2 cut(s) | 101, 242 |
| Fnu4HI | GCNGC | 2 cut(s) | 27, 30 |
| Fsp4HI | GCNGC | 2 cut(s) | 27, 30 |
| GluI | GCNGC | 2 cut(s) | 27, 30 |
| HaeIII | GGCC | 1 cut(s) | 233 |
| HapII | CCGG | 1 cut(s) | 273 |
| HincII | GTYRAC | 1 cut(s) | 283 |
| HindII | GTYRAC | 1 cut(s) | 283 |
| HpaII | CCGG | 1 cut(s) | 273 |
| HphI | GGTGA | 1 cut(s) | 213 |
| Hpy166II | GTNNAC | 3 cut(s) | 38, 108, 283 |
| Hpy188III | TCNNGA | 1 cut(s) | 154 |
| Hpy8I | GTNNAC | 3 cut(s) | 38, 108, 283 |
| Hpy99I | CGWCG | 1 cut(s) | 191 |
| HpyAV | CCTTC | 1 cut(s) | 244 |
| HpyCH4III | ACNGT | 1 cut(s) | 254 |
| HpyCH4IV | ACGT | 2 cut(s) | 163, 285 |
| HpyCH4V | TGCA | 1 cut(s) | 29 |
| HpySE526I | ACGT | 2 cut(s) | 163, 285 |
| LpnPI | CCDG | 2 cut(s) | 276, 286 |
| Lsp1109I | GCAGC | 2 cut(s) | 13, 41 |
| MaeII | ACGT | 2 cut(s) | 163, 285 |
| MaeIII | GTNAC | 1 cut(s) | 219 |
| MboII | GAAGA | 2 cut(s) | 130, 203 |
| MfeI | CAATTG | 1 cut(s) | 90 |
| MhlI | GDGCHC | 1 cut(s) | 270 |
| MluCI | AATT | 1 cut(s) | 90 |
| MnlI | CCTC | 3 cut(s) | 56, 150, 187 |
| MspI | CCGG | 1 cut(s) | 273 |
| MunI | CAATTG | 1 cut(s) | 90 |
| NmuCI | GTSAC | 1 cut(s) | 219 |
| PkrI | GCNGC | 2 cut(s) | 28, 31 |
| PstI | CTGCAG | 1 cut(s) | 31 |
| RsaI | GTAC | 1 cut(s) | 39 |
| RsaNI | GTAC | 1 cut(s) | 38 |
| SatI | GCNGC | 2 cut(s) | 27, 30 |
| SduI | GDGCHC | 1 cut(s) | 270 |
| SetI | ASST | 6 cut(s) | 57, 67, 71, 166, 198, 288 |
| SfcI | CTRYAG | 1 cut(s) | 27 |
| SmlI | CTYRAG | 1 cut(s) | 154 |
| SmoI | CTYRAG | 1 cut(s) | 154 |
| Sse9I | AATT | 1 cut(s) | 90 |
| StyI | CCWWGG | 1 cut(s) | 13 |
| TaaI | ACNGT | 1 cut(s) | 254 |
| TaiI | ACGT | 2 cut(s) | 166, 288 |
| TasI | AATT | 1 cut(s) | 90 |
| TscAI | CASTG | 1 cut(s) | 259 |
| TseFI | GTSAC | 1 cut(s) | 219 |
| TseI | GCWGC | 2 cut(s) | 26, 29 |
| Tsp45I | GTSAC | 1 cut(s) | 219 |
| TspDTI | ATGAA | 1 cut(s) | 130 |
| TspRI | CASTG | 1 cut(s) | 259 |