Rmu_co8157368.1_g000001

Methyltransferase-like protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8157368.1
Physical Location & Seq
Forward (+)
1 .. 582
582 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8157368.1_g000001.1.cds

Sequence Viewer

Length: 396 bp
acgacgacgacgacgcagcagcaagcctacggcgagccatggtactgggacaaccgctacgccaacgaatccggggcgttcgattggtaccagaagtaccaatctctagctcccattatcaatctgtacgtcccccgccaccgcatcctcgtcgtcggctgcggcaactccgcatttagcgaaggaatggcggacgatgggtacgaggaggtggtcagtatcgacatttcatctgtggtcatccaagctatgcaggagaagcactccaatcgtcaagaccttaaatatttggaaatggatgtgagagatatgaatgctttccaagccgcttcctttgatgctgttattgacaaaggtacttccttgttgtcttgtctcgcccagctcttacattaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

131

Amino Acids

14.85

Weight (kDa)

4.61

Isoelectric Point (pI)

32.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012435)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 87
AccB1I GGYRCC 1 cut(s) 87
AciI CCGC 7 cut(s) 55, 136, 142, 162, 171, 191, 327
AfaI GTAC 6 cut(s) 44, 89, 98, 128, 203, 358
AluBI AGCT 3 cut(s) 110, 248, 385
AluI AGCT 3 cut(s) 110, 248, 385
Alw26I GTCTC 1 cut(s) 380
ApeKI GCWGC 3 cut(s) 16, 19, 159
Asp700I GAANNNNTTC 1 cut(s) 317
Asp718I GGTACC 1 cut(s) 87
AsuC2I CCSGG 1 cut(s) 73
BanI GGYRCC 1 cut(s) 87
BbvI GCAGC 3 cut(s) 28, 31, 146
BccI CCATC 1 cut(s) 191
BceAI ACGGC 1 cut(s) 46
BcgI CGANNNNNNTGC 4 cut(s) 133, 167, 251, 285
BcnI CCSGG 1 cut(s) 73
BcoDI GTCTC 1 cut(s) 380
BfaI CTAG 1 cut(s) 107
BisI GCNGC 5 cut(s) 17, 20, 160, 163, 327
BlsI GCNGC 5 cut(s) 18, 21, 161, 164, 328
Bme1390I CCNGG 1 cut(s) 73
BmiI GGNNCC 1 cut(s) 89
BmrFI CCNGG 1 cut(s) 73
BmrI ACTGGG 1 cut(s) 55
BmsI GCATC 2 cut(s) 153, 328
BmuI ACTGGG 1 cut(s) 55
BplI GAGNNNNNCTC 2 cut(s) 248, 280
BpuMI CCSGG 1 cut(s) 73
BsaJI CCNNGG 2 cut(s) 38, 72
Bse1I ACTGG 1 cut(s) 50
BseDI CCNNGG 2 cut(s) 38, 72
BseGI GGATG 3 cut(s) 144, 240, 304
BseNI ACTGG 1 cut(s) 50
BseRI GAGGAG 1 cut(s) 221
BseXI GCAGC 3 cut(s) 28, 31, 146
BseYI CCCAGC 1 cut(s) 381
BshNI GGYRCC 1 cut(s) 87
BsiSI CCGG 1 cut(s) 72
BslFI GGGAC 2 cut(s) 62, 116
BsmAI GTCTC 1 cut(s) 380
BsmFI GGGAC 2 cut(s) 62, 116
BsmI GAATGC 1 cut(s) 319
Bsp19I CCATGG 1 cut(s) 38
BspACI CCGC 7 cut(s) 55, 136, 142, 162, 171, 191, 327
BspLI GGNNCC 1 cut(s) 89
BspT107I GGYRCC 1 cut(s) 87
BsrI ACTGG 1 cut(s) 50
BssECI CCNNGG 2 cut(s) 38, 72
BssT1I CCWWGG 1 cut(s) 38
BstC8I GCNNGC 2 cut(s) 24, 35
BstDSI CCRYGG 1 cut(s) 38
BstF5I GGATG 3 cut(s) 144, 240, 304
BstMAI GTCTC 1 cut(s) 380
BstMWI GCNNNNNNNGC 2 cut(s) 259, 323
BstSCI CCNGG 1 cut(s) 71
BstV1I GCAGC 3 cut(s) 28, 31, 146
BstXI CCANNNNNNTGG 1 cut(s) 45
BtgI CCRYGG 1 cut(s) 38
BtsCI GGATG 3 cut(s) 144, 240, 304
Cac8I GCNNGC 2 cut(s) 24, 35
CseI GACGC 1 cut(s) 22
Csp6I GTAC 6 cut(s) 43, 88, 97, 127, 202, 357
CviAII CATG 1 cut(s) 39
CviJI RGCY 7 cut(s) 26, 37, 110, 159, 248, 326, 385
CviKI_1 RGCY 7 cut(s) 26, 37, 110, 159, 248, 326, 385
CviQI GTAC 6 cut(s) 43, 88, 97, 127, 202, 357
EciI GGCGGA 1 cut(s) 206
Eco130I CCWWGG 1 cut(s) 38
EcoT14I CCWWGG 1 cut(s) 38
ErhI CCWWGG 1 cut(s) 38
FaeI CATG 1 cut(s) 42
FaiI YATR 3 cut(s) 40, 251, 311
FaqI GGGAC 2 cut(s) 62, 116
FatI CATG 1 cut(s) 38
FauI CCCGC 1 cut(s) 143
Fnu4HI GCNGC 5 cut(s) 17, 20, 160, 163, 327
FokI GGATG 3 cut(s) 131, 227, 311
Fsp4HI GCNGC 5 cut(s) 17, 20, 160, 163, 327
FspBI CTAG 1 cut(s) 107
GluI GCNGC 5 cut(s) 17, 20, 160, 163, 327
GsaI CCCAGC 1 cut(s) 385
HapII CCGG 1 cut(s) 72
HgaI GACGC 1 cut(s) 22
Hin1II CATG 1 cut(s) 42
HinfI GANTC 1 cut(s) 68
HpaII CCGG 1 cut(s) 72
Hpy188III TCNNGA 1 cut(s) 275
Hpy99I CGWCG 6 cut(s) 7, 10, 13, 16, 155, 158
HpyAV CCTTC 1 cut(s) 176
HpyCH4IV ACGT 1 cut(s) 129
HpyCH4V TGCA 1 cut(s) 253
HpyF10VI GCNNNNNNNGC 2 cut(s) 259, 323
HpySE526I ACGT 1 cut(s) 129
Hsp92II CATG 1 cut(s) 42
KpnI GGTACC 1 cut(s) 91
LmnI GCTCC 1 cut(s) 115
LpnPI CCDG 4 cut(s) 31, 85, 104, 239
Lsp1109I GCAGC 3 cut(s) 28, 31, 146
LweI GCATC 2 cut(s) 153, 328
MaeI CTAG 1 cut(s) 107
MaeII ACGT 1 cut(s) 129
MnlI CCTC 3 cut(s) 158, 199, 202
MroXI GAANNNNTTC 1 cut(s) 317
MseI TTAA 2 cut(s) 282, 394
MspI CCGG 1 cut(s) 72
MspR9I CCNGG 1 cut(s) 73
Mva1269I GAATGC 1 cut(s) 319
MwoI GCNNNNNNNGC 2 cut(s) 259, 323
NciI CCSGG 1 cut(s) 73
NcoI CCATGG 1 cut(s) 38
NlaIII CATG 1 cut(s) 42
NlaIV GGNNCC 1 cut(s) 89
PcsI WCGNNNNNNNCGW 2 cut(s) 8, 201
PctI GAATGC 1 cut(s) 319
PdmI GAANNNNTTC 1 cut(s) 317
PfeI GAWTC 1 cut(s) 68
PkrI GCNGC 5 cut(s) 18, 21, 161, 164, 328
PspFI CCCAGC 1 cut(s) 381
PspN4I GGNNCC 1 cut(s) 89
RsaI GTAC 6 cut(s) 44, 89, 98, 128, 203, 358
RsaNI GTAC 6 cut(s) 43, 88, 97, 127, 202, 357
SaqAI TTAA 2 cut(s) 282, 394
SatI GCNGC 5 cut(s) 17, 20, 160, 163, 327
ScrFI CCNGG 1 cut(s) 73
SetI ASST 7 cut(s) 112, 132, 213, 250, 282, 358, 387
SfaNI GCATC 2 cut(s) 153, 328
SsiI CCGC 7 cut(s) 55, 136, 142, 162, 171, 191, 327
SspI AATATT 1 cut(s) 287
SspMI CTAG 1 cut(s) 107
StyD4I CCNGG 1 cut(s) 71
StyI CCWWGG 1 cut(s) 38
TaiI ACGT 1 cut(s) 132
TaqI TCGA 2 cut(s) 81, 222
TauI GCSGC 2 cut(s) 165, 329
TfiI GAWTC 1 cut(s) 68
Tru1I TTAA 2 cut(s) 282, 394
Tru9I TTAA 2 cut(s) 282, 394
TseI GCWGC 3 cut(s) 16, 19, 159
TspDTI ATGAA 2 cut(s) 219, 326
XmnI GAANNNNTTC 1 cut(s) 317
XspI CTAG 1 cut(s) 107
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.