No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr5g0048211 |
| rosa_multiflora | Rmu_co8214612.1_g000001 Rmu_sc0002928.1_g000003 Rmu_sc0033697.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00007860 |
| rosa_samantha | Rh2BG430400 Rh2DG440300 Rh5AG479700 Rh5CG187300 Rh5DG512800 |
| rosa_wichuraiana | Rw5G044600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 110 |
| AfaI | GTAC | 2 cut(s) | 184, 192 |
| AflII | CTTAAG | 1 cut(s) | 153 |
| AgsI | TTSAA | 1 cut(s) | 116 |
| AluBI | AGCT | 1 cut(s) | 17 |
| AluI | AGCT | 1 cut(s) | 17 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 72, 171 |
| ApoI | RAATTY | 1 cut(s) | 110 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 95, 127 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 219 |
| AspS9I | GGNCC | 1 cut(s) | 63 |
| AvaII | GGWCC | 1 cut(s) | 63 |
| BfrI | CTTAAG | 1 cut(s) | 153 |
| Bme18I | GGWCC | 1 cut(s) | 63 |
| BmgT120I | GGNCC | 1 cut(s) | 63 |
| BmsI | GCATC | 1 cut(s) | 158 |
| BpmI | CTGGAG | 1 cut(s) | 48 |
| BpuEI | CTTGAG | 1 cut(s) | 84 |
| BsaJI | CCNNGG | 1 cut(s) | 34 |
| BsaWI | WCCGGW | 1 cut(s) | 60 |
| Bse1I | ACTGG | 2 cut(s) | 31, 66 |
| BseDI | CCNNGG | 1 cut(s) | 34 |
| BseMII | CTCAG | 1 cut(s) | 202 |
| BseNI | ACTGG | 2 cut(s) | 31, 66 |
| BsiSI | CCGG | 1 cut(s) | 61 |
| Bsp143I | GATC | 1 cut(s) | 162 |
| BspCNI | CTCAG | 1 cut(s) | 203 |
| BspTI | CTTAAG | 1 cut(s) | 153 |
| BsrI | ACTGG | 2 cut(s) | 31, 66 |
| BssECI | CCNNGG | 1 cut(s) | 34 |
| BssMI | GATC | 1 cut(s) | 162 |
| BssT1I | CCWWGG | 1 cut(s) | 34 |
| BstAFI | CTTAAG | 1 cut(s) | 153 |
| BstC8I | GCNNGC | 1 cut(s) | 73 |
| BstDEI | CTNAG | 2 cut(s) | 186, 211 |
| BstKTI | GATC | 1 cut(s) | 165 |
| BstMBI | GATC | 1 cut(s) | 162 |
| BtsIMutI | CAGTG | 2 cut(s) | 24, 73 |
| Cac8I | GCNNGC | 1 cut(s) | 73 |
| CaiI | CAGNNNCTG | 2 cut(s) | 72, 171 |
| Cfr13I | GGNCC | 1 cut(s) | 63 |
| Csp6I | GTAC | 2 cut(s) | 183, 191 |
| CviJI | RGCY | 1 cut(s) | 17 |
| CviKI_1 | RGCY | 1 cut(s) | 17 |
| CviQI | GTAC | 2 cut(s) | 183, 191 |
| DdeI | CTNAG | 2 cut(s) | 186, 211 |
| DpnI | GATC | 1 cut(s) | 164 |
| DpnII | GATC | 1 cut(s) | 162 |
| Eco130I | CCWWGG | 1 cut(s) | 34 |
| Eco47I | GGWCC | 1 cut(s) | 63 |
| EcoT14I | CCWWGG | 1 cut(s) | 34 |
| ErhI | CCWWGG | 1 cut(s) | 34 |
| FaiI | YATR | 1 cut(s) | 234 |
| GsuI | CTGGAG | 1 cut(s) | 48 |
| HapII | CCGG | 1 cut(s) | 61 |
| HindIII | AAGCTT | 1 cut(s) | 15 |
| HinfI | GANTC | 2 cut(s) | 30, 122 |
| HpaII | CCGG | 1 cut(s) | 61 |
| Hpy166II | GTNNAC | 1 cut(s) | 193 |
| Hpy188I | TCNGA | 1 cut(s) | 167 |
| Hpy188III | TCNNGA | 2 cut(s) | 81, 101 |
| Hpy8I | GTNNAC | 1 cut(s) | 193 |
| HpyAV | CCTTC | 1 cut(s) | 206 |
| HpyCH4V | TGCA | 3 cut(s) | 75, 150, 236 |
| HpyF3I | CTNAG | 2 cut(s) | 186, 211 |
| Kzo9I | GATC | 1 cut(s) | 162 |
| LpnPI | CCDG | 8 cut(s) | 12, 66, 74, 79, 85, 118, 120, 157 |
| LweI | GCATC | 1 cut(s) | 158 |
| MalI | GATC | 1 cut(s) | 164 |
| MboI | GATC | 1 cut(s) | 162 |
| MboII | GAAGA | 2 cut(s) | 96, 215 |
| MfeI | CAATTG | 1 cut(s) | 126 |
| MluCI | AATT | 2 cut(s) | 110, 126 |
| MlyI | GAGTC | 1 cut(s) | 39 |
| MroXI | GAANNNNTTC | 1 cut(s) | 219 |
| MseI | TTAA | 1 cut(s) | 154 |
| MspCI | CTTAAG | 1 cut(s) | 153 |
| MspI | CCGG | 1 cut(s) | 61 |
| MunI | CAATTG | 1 cut(s) | 126 |
| NdeII | GATC | 1 cut(s) | 162 |
| PdmI | GAANNNNTTC | 1 cut(s) | 219 |
| PfeI | GAWTC | 1 cut(s) | 122 |
| PleI | GAGTC | 1 cut(s) | 38 |
| PpsI | GAGTC | 1 cut(s) | 38 |
| PspPI | GGNCC | 1 cut(s) | 63 |
| PstNI | CAGNNNCTG | 2 cut(s) | 72, 171 |
| RsaI | GTAC | 2 cut(s) | 184, 192 |
| RsaNI | GTAC | 2 cut(s) | 183, 191 |
| SaqAI | TTAA | 1 cut(s) | 154 |
| Sau3AI | GATC | 1 cut(s) | 162 |
| Sau96I | GGNCC | 1 cut(s) | 63 |
| SchI | GAGTC | 1 cut(s) | 39 |
| SetI | ASST | 3 cut(s) | 19, 192, 198 |
| SfaNI | GCATC | 1 cut(s) | 158 |
| SinI | GGWCC | 1 cut(s) | 63 |
| SmlI | CTYRAG | 2 cut(s) | 99, 153 |
| SmoI | CTYRAG | 2 cut(s) | 99, 153 |
| Sse9I | AATT | 2 cut(s) | 110, 126 |
| StyI | CCWWGG | 1 cut(s) | 34 |
| TasI | AATT | 2 cut(s) | 110, 126 |
| TatI | WGTACW | 1 cut(s) | 182 |
| TfiI | GAWTC | 1 cut(s) | 122 |
| Tru1I | TTAA | 1 cut(s) | 154 |
| Tru9I | TTAA | 1 cut(s) | 154 |
| TscAI | CASTG | 2 cut(s) | 31, 73 |
| TspDTI | ATGAA | 1 cut(s) | 10 |
| TspRI | CASTG | 2 cut(s) | 31, 73 |
| Vha464I | CTTAAG | 1 cut(s) | 153 |
| VpaK11BI | GGWCC | 1 cut(s) | 63 |
| XapI | RAATTY | 1 cut(s) | 110 |
| XmnI | GAANNNNTTC | 1 cut(s) | 219 |