Rh2BG430400

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Reverse (-)
60983166 .. 60986604
3439 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG430400.1

Sequence Viewer

Length: 333 bp
ATGCTACGGACCTTGGATTTATCAAACAACAGTTTGACAGGATCAGTGCCCGACTTTTTGTCTCGATTGCCAAACTTAAACTTCCTCGCGATGCTTTCTCATTTTTGCTTGGCATACTTGATCATATTGCTTTGTCTGCTGGTATTTGGGATCATTGCTGGTGCTATTCACATGCCTATCCTGGCGTTTAACATCATCTATGGTGTTCTTGTGGCTTTTGGAACTGGTATTACCATTGGACTTATCTTGTCATGCTGCTATGTGGTGGGAGTTGTGCAGAGGGAGAACATGATTGCCAAGAATGTGGCTCTTGGCAACCGTCCTGCTCATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

110

Amino Acids

11.87

Weight (kDa)

8.48

Isoelectric Point (pI)

29.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0018199)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 89
AclWI GGATC 2 cut(s) 49, 158
AhdI GACNNNNNGTC 1 cut(s) 58
AjnI CCWGG 1 cut(s) 180
Alw26I GTCTC 1 cut(s) 66
AlwI GGATC 2 cut(s) 49, 158
ApeKI GCWGC 1 cut(s) 255
AspS9I GGNCC 1 cut(s) 9
AvaII GGWCC 1 cut(s) 9
BaeGI GKGCMC 1 cut(s) 51
BbvI GCAGC 1 cut(s) 242
BciT130I CCWGG 1 cut(s) 182
BclI TGATCA 1 cut(s) 120
BcoDI GTCTC 1 cut(s) 66
BisI GCNGC 1 cut(s) 256
BlsI GCNGC 1 cut(s) 257
Bme1390I CCNGG 1 cut(s) 182
Bme18I GGWCC 1 cut(s) 9
BmeRI GACNNNNNGTC 1 cut(s) 58
BmgT120I GGNCC 1 cut(s) 9
BmrFI CCNGG 1 cut(s) 182
BmsI GCATC 1 cut(s) 81
BsaJI CCNNGG 1 cut(s) 12
Bse1I ACTGG 1 cut(s) 229
Bse3DI GCAATG 1 cut(s) 153
BseBI CCWGG 1 cut(s) 182
BseDI CCNNGG 1 cut(s) 12
BseMI GCAATG 1 cut(s) 153
BseNI ACTGG 1 cut(s) 229
BseSI GKGCMC 1 cut(s) 51
BseXI GCAGC 1 cut(s) 242
BsgI GTGCAG 1 cut(s) 296
Bsh1236I CGCG 1 cut(s) 89
BsmAI GTCTC 1 cut(s) 66
Bsp1286I GDGCHC 1 cut(s) 51
Bsp143I GATC 3 cut(s) 41, 120, 150
Bsp68I TCGCGA 1 cut(s) 89
BspFNI CGCG 1 cut(s) 89
BspPI GGATC 2 cut(s) 49, 158
BsrDI GCAATG 1 cut(s) 153
BsrI ACTGG 1 cut(s) 229
BssECI CCNNGG 1 cut(s) 12
BssMI GATC 3 cut(s) 41, 120, 150
BssT1I CCWWGG 1 cut(s) 12
Bst2UI CCWGG 1 cut(s) 182
Bst4CI ACNGT 2 cut(s) 32, 320
BstFNI CGCG 1 cut(s) 89
BstKTI GATC 3 cut(s) 44, 123, 153
BstMAI GTCTC 1 cut(s) 66
BstMBI GATC 3 cut(s) 41, 120, 150
BstMWI GCNNNNNNNGC 1 cut(s) 136
BstNI CCWGG 1 cut(s) 182
BstNSI RCATGY 1 cut(s) 175
BstSCI CCNGG 1 cut(s) 180
BstSLI GKGCMC 1 cut(s) 51
BstUI CGCG 1 cut(s) 89
BstV1I GCAGC 1 cut(s) 242
BstXI CCANNNNNNTGG 1 cut(s) 304
BtgZI GCGATG 1 cut(s) 104
BtsIMutI CAGTG 1 cut(s) 51
BtuMI TCGCGA 1 cut(s) 89
Cfr13I GGNCC 1 cut(s) 9
CviAII CATG 3 cut(s) 172, 252, 289
CviJI RGCY 2 cut(s) 215, 308
CviKI_1 RGCY 2 cut(s) 215, 308
DpnI GATC 3 cut(s) 43, 122, 152
DpnII GATC 3 cut(s) 41, 120, 150
DriI GACNNNNNGTC 1 cut(s) 58
Eam1105I GACNNNNNGTC 1 cut(s) 58
Eco130I CCWWGG 1 cut(s) 12
Eco47I GGWCC 1 cut(s) 9
EcoRII CCWGG 1 cut(s) 180
EcoT14I CCWWGG 1 cut(s) 12
ErhI CCWWGG 1 cut(s) 12
FaeI CATG 3 cut(s) 175, 255, 292
FaiI YATR 7 cut(s) 115, 125, 173, 201, 253, 261, 290
FatI CATG 3 cut(s) 171, 251, 288
FbaI TGATCA 1 cut(s) 120
Fnu4HI GCNGC 1 cut(s) 256
Fsp4HI GCNGC 1 cut(s) 256
GluI GCNGC 1 cut(s) 256
Hin1II CATG 3 cut(s) 175, 255, 292
Hpy188III TCNNGA 2 cut(s) 63, 88
HpyCH4III ACNGT 2 cut(s) 32, 320
HpyCH4V TGCA 1 cut(s) 277
HpyF10VI GCNNNNNNNGC 1 cut(s) 136
Hsp92II CATG 3 cut(s) 175, 255, 292
Ksp22I TGATCA 1 cut(s) 120
Kzo9I GATC 3 cut(s) 41, 120, 150
LpnPI CCDG 6 cut(s) 24, 125, 144, 167, 194, 210
Lsp1109I GCAGC 1 cut(s) 242
LweI GCATC 1 cut(s) 81
MalI GATC 3 cut(s) 43, 122, 152
MboI GATC 3 cut(s) 41, 120, 150
MhlI GDGCHC 1 cut(s) 51
MnlI CCTC 2 cut(s) 95, 273
MseI TTAA 3 cut(s) 77, 189, 331
MspR9I CCNGG 1 cut(s) 182
MvaI CCWGG 1 cut(s) 182
MvnI CGCG 1 cut(s) 89
MwoI GCNNNNNNNGC 1 cut(s) 136
NdeII GATC 3 cut(s) 41, 120, 150
NlaIII CATG 3 cut(s) 175, 255, 292
NruI TCGCGA 1 cut(s) 89
NspI RCATGY 1 cut(s) 175
PkrI GCNGC 1 cut(s) 257
Psp6I CCWGG 1 cut(s) 180
PspGI CCWGG 1 cut(s) 180
PspPI GGNCC 1 cut(s) 9
PsrI GAACNNNNNNTAC 2 cut(s) 214, 246
RruI TCGCGA 1 cut(s) 89
SaqAI TTAA 3 cut(s) 77, 189, 331
SatI GCNGC 1 cut(s) 256
Sau3AI GATC 3 cut(s) 41, 120, 150
Sau96I GGNCC 1 cut(s) 9
ScrFI CCNGG 1 cut(s) 182
SduI GDGCHC 1 cut(s) 51
SetI ASST 1 cut(s) 14
SfaNI GCATC 1 cut(s) 81
SinI GGWCC 1 cut(s) 9
StyD4I CCNGG 1 cut(s) 180
StyI CCWWGG 1 cut(s) 12
TaaI ACNGT 2 cut(s) 32, 320
TaqI TCGA 1 cut(s) 64
Tru1I TTAA 3 cut(s) 77, 189, 331
Tru9I TTAA 3 cut(s) 77, 189, 331
TscAI CASTG 1 cut(s) 51
TseI GCWGC 1 cut(s) 255
TspGWI ACGGA 1 cut(s) 22
TspRI CASTG 1 cut(s) 51
VpaK11BI GGWCC 1 cut(s) 9
XceI RCATGY 1 cut(s) 175
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.