Rmu_co8504827.1_g000001
ERF Family

Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8504827.1
OG0008702
Physical Location & Seq
Forward (+)
1 .. 2816
2816 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8504827.1_g000001.1.cds

Sequence Viewer

Length: 2769 bp
gggaagatggaattagaaggaaggggaaatgacacagtggtaactcaagtcagctttggtggatttggaagtcatgttaaagcaaaagatcttgtagactacttggaagatgaaattgggcttgtatataggtgtcggttgaaaacttcttggacccctccagagtctcttccgagctttgagctcgttgatactgcaaatattgaaacaacagatgaatataaaaaggttgagccacatgcatttgtgcattttgcttcgcccgagtcagtgactgctgctatggatgctgttgggcgctgtcaactctttctcaagaaccaagcactgaaagtaagtttgggccctgagaattcatacaacatgaacaagaggaggaggactaaaattccattcaagttagctgatgtgcgtcttgagattggaagtttagttcgcctagatgagttctttgttgcttggagggggccatcttatggggttgattttgttgtggatccttttgatgggacatgcaaattttgttttagaagagatactgccttttcatttaaagggatgaataagtatgctgtgataaaatgcgattttaaggtggagttccaggtaagagaaatcagtgaatttaaacactatacagagccttcatatcttgtaattctgttgaggctggcttcatcaccttgggtttcatatcgaactgccgatgatgatattgatcaatcagttccatttgatttgttggatgacgatgatccttggattagaacaacagattttactcctagtggggcaatcgggcgttgtaattcttacagagtttcaatcccaccgcggcatggtgctaagctgaagaaggccatgagttatcttaaagaacgcagggtgcaagaggtttcgatcaaaaagccacctaggattcagaatgaacctgattttgaaatgcccatgtcggatcctttcttctctattcattacaaggaaaatatttcctttgagatattgttcttggtcaatgctgtaatgcacaggggcattttaaatcagcaccagttgtcagacggcttttttgatttactgagaaaccaaccaaaggagatcaatgtggctgcattgaagcacttatgttcatacaaacacccggtttttgatgcctctaaaaggctgaaacttgtccaagaatggttgctgagaaaccccaagcttatcaagaatcccaaacatttggatgatattgctgaagttaggaggttggtgattaccccaactaaagcctattgtcttccaccagaggttgaactatccaacagggttcttagaaaatataaagaagttgctgataggtttttaagggttacctttatggatgaaggaatgcagacaataaattccaatgttatgaattcttatgttgctcctattgtgaaggaaatcacagaaaacaccatccctcagaaaacaaaagtgtatgcaaggattcgggccattctgatgaagggatttcaattatgtggtcgtaagtactcgttcttggccttctcatccaatcaactgagggaccgttctgcctggtttttcgctgaagacaagaagattagtatacaaggaatcaaaaattggatggggaagttccacaacagaaacgttgcaaaatgtgctgctaggatgggtcagtgtttttcgtctacatatgcaacggtagaagttccatcagcccaggttaatcctaaactgccagatattgagagaaatgactatatcttttctgatggtattggtaggatcaccccagaccttgcaatggaagttgcagaaagactgaaattggacagagatccaccttgtgcatatcaaattagatacggaggctgtaaaggggttattgcttgttggccaccgacaggtgatggcttccggctttctttgaggcctagtatgaacaagtttgagtcggagcatactatattggaaatatgttcatggactaggttccagccaggtttcttaaacaggcagattataacattgctttcagcacttggtgttccagatgaaatattctggacaatgcaggagacaatggtttccaaattaaagcagatgctggtggacacagatgtggcgtttgatgttctcactgcatcctgtgctgagcaaggaaatgctgcagctataatgttaagtgcaggtttcaagccccagacagaaccacatctgagaggcatgttgacctgtatacaagccgcacagctctggggacttagggaaaaggccaggatttttgttccttctgggagatggcttatgggctgtctggatgagttaggggtacttgagcaaggccagtgctttgtccaagtgtctaccccatcgctggaaaactgttttgcaaagcatggctctaggtttgatcagatagataaaaatctacaagtaataaaagggttcgtagtggtagcaaagaatccttgccttcatccaggagatataaggattcttgaagcagttgatgcacctgggttacaccacttgcatgattgccttgttttccctcagaaaggtcataggcctcacacagatgaagcttctggtagtgacctagatggggacctctactttgtcacatgggatgaaaatcttattcccccacgtaagaagagctgggaacctatgcagtatgaagctgcagaagccaaagtttcagggcgtcctgtcacgaaccaggtgattacttgccacttattatggttgtccctggaatttctgtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0001172 GO:0002252 GO:0002376 GO:0003006 GO:0003674 GO:0003824 GO:0003968 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007275 GO:0008037 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009605 GO:0009607 GO:0009615 GO:0009616 GO:0009791 GO:0009856 GO:0009875 GO:0009888 GO:0009892 GO:0009908 GO:0009987 GO:0010033 GO:0010073 GO:0010074 GO:0010267 GO:0010467 GO:0010468 GO:0010492 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0016070 GO:0016246 GO:0016441 GO:0016458 GO:0016740 GO:0016772 GO:0016779 GO:0018130 GO:0019222 GO:0019438 GO:0019827 GO:0022414 GO:0030422 GO:0031047 GO:0031050 GO:0032501 GO:0032502 GO:0032774 GO:0034062 GO:0034641 GO:0034654 GO:0035194 GO:0035821 GO:0040029 GO:0042221 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043331 GO:0044003 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044403 GO:0044419 GO:0044424 GO:0044464 GO:0044706 GO:0045087 GO:0046483 GO:0048366 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048467 GO:0048507 GO:0048519 GO:0048544 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050896 GO:0051607 GO:0051701 GO:0051704 GO:0051707 GO:0051716 GO:0051817 GO:0052018 GO:0052249 GO:0060255 GO:0061458 GO:0065007 GO:0070887 GO:0070918 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0090304 GO:0090567 GO:0097659 GO:0097747 GO:0098542 GO:0098586 GO:0098727 GO:0099402 GO:0140098 GO:1901360 GO:1901362 GO:1901576 GO:1901698 GO:1901699
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RdRP

Protein Analysis

922

Amino Acids

105.01

Weight (kDa)

8.28

Isoelectric Point (pI)

33.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2021
Acc36I ACCTGC 1 cut(s) 2177
AccB7I CCANNNNNTGG 1 cut(s) 476
AccI GTMKAC 5 cut(s) 96, 1600, 1685, 2236, 2363
AccII CGCG 1 cut(s) 835
AciI CCGC 3 cut(s) 833, 835, 2244
AclI AACGTT 1 cut(s) 1644
AclWI GGATC 7 cut(s) 491, 504, 749, 950, 963, 1790, 1829
AcoI YGGCCR 1 cut(s) 1892
AcsI RAATTY 7 cut(s) 352, 387, 518, 623, 1387, 1402, 2759
AcuI CTGAAG 3 cut(s) 872, 1260, 1602
AcyI GRCGYC 1 cut(s) 2707
AdeI CACNNNGTG 2 cut(s) 1844, 2042
AfaI GTAC 2 cut(s) 1523, 2331
AjnI CCWGG 9 cut(s) 603, 1568, 1716, 1996, 2273, 2479, 2515, 2721, 2754
AjuI GAANNNNNNNTTGG 6 cut(s) 99, 131, 323, 355, 1600, 1632
AleI CACNNNNGTG 1 cut(s) 2117
AloI GAACNNNNNNTCC 2 cut(s) 417, 449
Alw21I GWGCWC 1 cut(s) 186
Alw26I GTCTC 2 cut(s) 171, 2069
AlwI GGATC 7 cut(s) 491, 504, 749, 950, 963, 1790, 1829
AlwNI CAGNNNCTG 2 cut(s) 275, 2104
Ama87I CYCGRG 1 cut(s) 263
ApaI GGGCCC 1 cut(s) 347
ApeKI GCWGC 6 cut(s) 278, 1109, 1658, 2165, 2168, 2684
ApoI RAATTY 7 cut(s) 352, 387, 518, 623, 1387, 1402, 2759
ArsI GACNNNNNNTTYG 4 cut(s) 1052, 1084, 2600, 2632
AspA2I CCTAGG 1 cut(s) 914
AspLEI GCGC 1 cut(s) 300
AspS9I GGNCC 7 cut(s) 153, 343, 344, 467, 1482, 1558, 2608
AsuC2I CCSGG 1 cut(s) 1142
AsuHPI GGTGA 5 cut(s) 672, 1267, 1777, 1916, 2737
AvaI CYCGRG 1 cut(s) 263
AvaII GGWCC 3 cut(s) 153, 1558, 2608
AvrII CCTAGG 1 cut(s) 914
BaeGI GKGCMC 1 cut(s) 347
BalI TGGCCA 1 cut(s) 1894
BamHI GGATCC 2 cut(s) 496, 955
BanII GRGCYC 2 cut(s) 186, 347
BbsI GAAGAC 2 cut(s) 1274, 1590
Bbv12I GWGCWC 1 cut(s) 186
BbvI GCAGC 6 cut(s) 265, 1096, 1645, 2152, 2180, 2671
BceAI ACGGC 1 cut(s) 1078
BciT130I CCWGG 9 cut(s) 605, 1570, 1718, 1998, 2275, 2481, 2517, 2723, 2756
BclI TGATCA 2 cut(s) 718, 2410
BcnI CCSGG 1 cut(s) 1142
BcoDI GTCTC 2 cut(s) 171, 2069
BfaI CTAG 8 cut(s) 440, 786, 915, 1662, 1932, 1986, 2403, 2600
BfmI CTRYAG 2 cut(s) 2166, 2685
BfoI RGCGCY 1 cut(s) 301
BfuAI ACCTGC 1 cut(s) 2177
BglII AGATCT 1 cut(s) 88
BisI GCNGC 8 cut(s) 279, 836, 1110, 1659, 2166, 2169, 2244, 2685
BlnI CCTAGG 1 cut(s) 914
BlpI GCTNAGC 2 cut(s) 846, 2151
BlsI GCNGC 8 cut(s) 280, 837, 1111, 1660, 2167, 2170, 2245, 2686
BmcAI AGTACT 1 cut(s) 1523
Bme18I GGWCC 3 cut(s) 153, 1558, 2608
BmeT110I CYCGRG 1 cut(s) 263
BmgT120I GGNCC 7 cut(s) 153, 343, 344, 467, 1482, 1558, 2608
BmiI GGNNCC 9 cut(s) 155, 345, 468, 498, 957, 1559, 1991, 2609, 2667
BmsI GCATC 5 cut(s) 277, 1141, 2091, 2150, 2500
BpiI GAAGAC 2 cut(s) 1274, 1590
BpmI CTGGAG 1 cut(s) 144
Bpu1102I GCTNAGC 2 cut(s) 846, 2151
BpuEI CTTGAG 4 cut(s) 30, 299, 437, 2354
BpuMI CCSGG 1 cut(s) 1142
BsaAI YACGTR 1 cut(s) 2651
BsaBI GATNNNNATC 3 cut(s) 717, 2424, 2634
BsaHI GRCGYC 1 cut(s) 2707
BsaJI CCNNGG 7 cut(s) 683, 758, 833, 914, 1716, 2516, 2754
Bse1I ACTGG 2 cut(s) 1051, 2344
Bse3DI GCAATG 2 cut(s) 1806, 2024
Bse8I GATNNNNATC 3 cut(s) 717, 2424, 2634
BseBI CCWGG 9 cut(s) 605, 1570, 1718, 1998, 2275, 2481, 2517, 2723, 2756
BseDI CCNNGG 7 cut(s) 683, 758, 833, 914, 1716, 2516, 2754
BseJI GATNNNNATC 3 cut(s) 717, 2424, 2634
BseMI GCAATG 2 cut(s) 1806, 2024
BseMII CTCAG 8 cut(s) 339, 1070, 1181, 1466, 1544, 2142, 2207, 2567
BseNI ACTGG 2 cut(s) 1051, 2344
BseRI GAGGAG 2 cut(s) 388, 391
BseSI GKGCMC 1 cut(s) 347
BseXI GCAGC 6 cut(s) 265, 1096, 1645, 2152, 2180, 2671
BseYI CCCAGC 1 cut(s) 2661
BsgI GTGCAG 1 cut(s) 2205
Bsh1236I CGCG 1 cut(s) 835
BsiHKAI GWGCWC 1 cut(s) 186
BsiHKCI CYCGRG 1 cut(s) 263
BsiSI CCGG 2 cut(s) 1142, 1915
BslFI GGGAC 5 cut(s) 523, 1571, 2271, 2621, 2737
BsmAI GTCTC 2 cut(s) 171, 2069
BsmFI GGGAC 5 cut(s) 523, 1571, 2271, 2621, 2737
BsmI GAATGC 1 cut(s) 1380
BsoBI CYCGRG 1 cut(s) 263
Bsp120I GGGCCC 1 cut(s) 343
Bsp1286I GDGCHC 2 cut(s) 186, 347
Bsp1720I GCTNAGC 2 cut(s) 846, 2151
BspACI CCGC 3 cut(s) 833, 835, 2244
BspCNI CTCAG 8 cut(s) 340, 1071, 1182, 1465, 1545, 2143, 2208, 2566
BspFNI CGCG 1 cut(s) 835
BspLI GGNNCC 9 cut(s) 155, 345, 468, 498, 957, 1559, 1991, 2609, 2667
BspMAI CTGCAG 2 cut(s) 2170, 2689
BspMI ACCTGC 1 cut(s) 2177
BspPI GGATC 7 cut(s) 491, 504, 749, 950, 963, 1790, 1829
BspQI GCTCTTC 1 cut(s) 2651
BsrDI GCAATG 2 cut(s) 1806, 2024
BsrI ACTGG 2 cut(s) 1051, 2344
BssECI CCNNGG 7 cut(s) 683, 758, 833, 914, 1716, 2516, 2754
BssNAI GTATAC 2 cut(s) 1601, 2237
BssNI GRCGYC 1 cut(s) 2707
BssT1I CCWWGG 3 cut(s) 683, 758, 914
Bst1107I GTATAC 2 cut(s) 1601, 2237
Bst2UI CCWGG 9 cut(s) 605, 1570, 1718, 1998, 2275, 2481, 2517, 2723, 2756
Bst4CI ACNGT 4 cut(s) 37, 1562, 1699, 2384
Bst6I CTCTTC 3 cut(s) 174, 526, 2651
BstACI GRCGYC 1 cut(s) 2707
BstAPI GCANNNNNTGC 3 cut(s) 1655, 2147, 2510
BstBAI YACGTR 1 cut(s) 2651
BstC8I GCNNGC 1 cut(s) 672
BstDSI CCRYGG 1 cut(s) 833
BstEII GGTNACC 1 cut(s) 1354
BstENI CCTNNNNNAGG 2 cut(s) 1159, 2556
BstFNI CGCG 1 cut(s) 835
BstH2I RGCGCY 1 cut(s) 301
BstHHI GCGC 1 cut(s) 300
BstMAI GTCTC 2 cut(s) 171, 2069
BstMWI GCNNNNNNNGC 5 cut(s) 287, 1655, 2147, 2510, 2690
BstNI CCWGG 9 cut(s) 605, 1570, 1718, 1998, 2275, 2481, 2517, 2723, 2756
BstNSI RCATGY 3 cut(s) 242, 516, 2227
BstPI GGTNACC 1 cut(s) 1354
BstSFI CTRYAG 2 cut(s) 2166, 2685
BstSLI GKGCMC 1 cut(s) 347
BstUI CGCG 1 cut(s) 835
BstV1I GCAGC 6 cut(s) 265, 1096, 1645, 2152, 2180, 2671
BstV2I GAAGAC 2 cut(s) 1274, 1590
BstX2I RGATCY 4 cut(s) 88, 496, 955, 1834
BstXI CCANNNNNNTGG 1 cut(s) 1225
BstYI RGATCY 4 cut(s) 88, 496, 955, 1834
BstZ17I GTATAC 2 cut(s) 1601, 2237
BtgI CCRYGG 1 cut(s) 833
BtgZI GCGATG 1 cut(s) 2355
BtsI GCAGTG 1 cut(s) 2136
BtsIMutI CAGTG 7 cut(s) 42, 276, 326, 625, 1679, 2136, 2351
BveI ACCTGC 1 cut(s) 2177
Cac8I GCNNGC 1 cut(s) 672
CaiI CAGNNNCTG 2 cut(s) 275, 2104
CfoI GCGC 1 cut(s) 300
Cfr13I GGNCC 7 cut(s) 153, 343, 344, 467, 1482, 1558, 2608
Cfr42I CCGCGG 1 cut(s) 836
CseI GACGC 2 cut(s) 401, 2696
CsiI ACCWGGT 1 cut(s) 2721
Csp6I GTAC 2 cut(s) 1522, 2330
CviQI GTAC 2 cut(s) 1522, 2330
DraI TTTAAA 3 cut(s) 553, 628, 1041
DraIII CACNNNGTG 2 cut(s) 1844, 2042
EaeI YGGCCR 1 cut(s) 1892
Eam1104I CTCTTC 3 cut(s) 174, 526, 2651
EarI CTCTTC 3 cut(s) 174, 526, 2651
Ecl136II GAGCTC 1 cut(s) 184
Eco130I CCWWGG 3 cut(s) 683, 758, 914
Eco147I AGGCCT 2 cut(s) 1930, 2569
Eco24I GRGCYC 2 cut(s) 186, 347
Eco47I GGWCC 3 cut(s) 153, 1558, 2608
Eco53kI GAGCTC 1 cut(s) 184
Eco57I CTGAAG 3 cut(s) 872, 1260, 1602
Eco88I CYCGRG 1 cut(s) 263
Eco91I GGTNACC 1 cut(s) 1354
EcoICRI GAGCTC 1 cut(s) 184
EcoNI CCTNNNNNAGG 2 cut(s) 1159, 2556
EcoO109I RGGNCCY 2 cut(s) 344, 2608
EcoO65I GGTNACC 1 cut(s) 1354
EcoRI GAATTC 2 cut(s) 352, 1402
EcoRII CCWGG 9 cut(s) 603, 1568, 1716, 1996, 2273, 2479, 2515, 2721, 2754
EcoT14I CCWWGG 3 cut(s) 683, 758, 914
EcoT22I ATGCAT 1 cut(s) 244
EcoT38I GRGCYC 2 cut(s) 186, 347
ErhI CCWWGG 3 cut(s) 683, 758, 914
FaqI GGGAC 5 cut(s) 523, 1571, 2271, 2621, 2737
FauNDI CATATG 1 cut(s) 1690
FbaI TGATCA 2 cut(s) 718, 2410
FblI GTMKAC 5 cut(s) 96, 1600, 1685, 2236, 2363
Fnu4HI GCNGC 8 cut(s) 279, 836, 1110, 1659, 2166, 2169, 2244, 2685
FriOI GRGCYC 2 cut(s) 186, 347
Fsp4HI GCNGC 8 cut(s) 279, 836, 1110, 1659, 2166, 2169, 2244, 2685
FspBI CTAG 8 cut(s) 440, 786, 915, 1662, 1932, 1986, 2403, 2600
GlaI GCGC 1 cut(s) 299
GluI GCNGC 8 cut(s) 279, 836, 1110, 1659, 2166, 2169, 2244, 2685
GsaI CCCAGC 1 cut(s) 2665
GsuI CTGGAG 1 cut(s) 144
HaeII RGCGCY 1 cut(s) 301
HapII CCGG 2 cut(s) 1142, 1915
HgaI GACGC 2 cut(s) 401, 2696
HhaI GCGC 1 cut(s) 300
Hin1I GRCGYC 1 cut(s) 2707
Hin6I GCGC 1 cut(s) 298
HinP1I GCGC 1 cut(s) 298
HincII GTYRAC 2 cut(s) 305, 2229
HindII GTYRAC 2 cut(s) 305, 2229
HindIII AAGCTT 2 cut(s) 1202, 2583
HinfI GANTC 9 cut(s) 164, 266, 919, 1213, 1477, 1608, 1949, 2464, 2494
HpaII CCGG 2 cut(s) 1142, 1915
HphI GGTGA 5 cut(s) 672, 1267, 1777, 1916, 2737
Hpy166II GTNNAC 8 cut(s) 97, 305, 1601, 1686, 2110, 2229, 2237, 2364
Hpy188III TCNNGA 9 cut(s) 161, 316, 416, 1210, 2048, 2062, 2315, 2498, 2716
Hpy8I GTNNAC 8 cut(s) 97, 305, 1601, 1686, 2110, 2229, 2237, 2364
HpyCH4III ACNGT 4 cut(s) 37, 1562, 1699, 2384
HpyCH4IV ACGT 2 cut(s) 1644, 2650
HpyF10VI GCNNNNNNNGC 5 cut(s) 287, 1655, 2147, 2510, 2690
HpySE526I ACGT 2 cut(s) 1644, 2650
Hsp92I GRCGYC 1 cut(s) 2707
HspAI GCGC 1 cut(s) 298
Ksp22I TGATCA 2 cut(s) 718, 2410
KspI CCGCGG 1 cut(s) 836
LguI GCTCTTC 1 cut(s) 2651
LmnI GCTCC 2 cut(s) 1420, 1954
Lsp1109I GCAGC 6 cut(s) 265, 1096, 1645, 2152, 2180, 2671
LweI GCATC 5 cut(s) 277, 1141, 2091, 2150, 2500
MabI ACCWGGT 1 cut(s) 2721
MaeI CTAG 8 cut(s) 440, 786, 915, 1662, 1932, 1986, 2403, 2600
MaeII ACGT 2 cut(s) 1644, 2650
MaeIII GTNAC 7 cut(s) 40, 271, 1354, 2520, 2594, 2620, 2713
MflI RGATCY 4 cut(s) 88, 496, 955, 1834
MhlI GDGCHC 2 cut(s) 186, 347
MlsI TGGCCA 1 cut(s) 1894
MluNI TGGCCA 1 cut(s) 1894
MlyI GAGTC 3 cut(s) 173, 275, 1958
MmeI TCCRAC 4 cut(s) 723, 933, 1329, 1932
Mox20I TGGCCA 1 cut(s) 1894
Mph1103I ATGCAT 1 cut(s) 244
MscI TGGCCA 1 cut(s) 1894
MslI CAYNNNNRTG 5 cut(s) 1227, 1490, 2117, 2532, 2577
Msp20I TGGCCA 1 cut(s) 1894
MspA1I CMGCKG 1 cut(s) 835
MspI CCGG 2 cut(s) 1142, 1915
Mva1269I GAATGC 1 cut(s) 1380
MvaI CCWGG 9 cut(s) 605, 1570, 1718, 1998, 2275, 2481, 2517, 2723, 2756
MvnI CGCG 1 cut(s) 835
MwoI GCNNNNNNNGC 5 cut(s) 287, 1655, 2147, 2510, 2690
NciI CCSGG 1 cut(s) 1142
NdeI CATATG 1 cut(s) 1690
NlaIV GGNNCC 9 cut(s) 155, 345, 468, 498, 957, 1559, 1991, 2609, 2667
NmuCI GTSAC 4 cut(s) 271, 2594, 2620, 2713
NsiI ATGCAT 1 cut(s) 244
NspI RCATGY 3 cut(s) 242, 516, 2227
OliI CACNNNNGTG 1 cut(s) 2117
PceI AGGCCT 2 cut(s) 1930, 2569
PciSI GCTCTTC 1 cut(s) 2651
PctI GAATGC 1 cut(s) 1380
PfeI GAWTC 6 cut(s) 919, 1213, 1477, 1608, 2464, 2494
PflMI CCANNNNNTGG 1 cut(s) 476
PfoI TCCNGGA 1 cut(s) 2479
PkrI GCNGC 8 cut(s) 280, 837, 1111, 1660, 2167, 2170, 2245, 2686
PleI GAGTC 3 cut(s) 172, 274, 1957
PpsI GAGTC 3 cut(s) 172, 274, 1957
Ppu21I YACGTR 1 cut(s) 2651
PpuMI RGGWCCY 1 cut(s) 2608
PsiI TTATAA 1 cut(s) 2021
Psp124BI GAGCTC 1 cut(s) 186
Psp1406I AACGTT 1 cut(s) 1644
Psp5II RGGWCCY 1 cut(s) 2608
Psp6I CCWGG 9 cut(s) 603, 1568, 1716, 1996, 2273, 2479, 2515, 2721, 2754
PspEI GGTNACC 1 cut(s) 1354
PspFI CCCAGC 1 cut(s) 2661
PspGI CCWGG 9 cut(s) 603, 1568, 1716, 1996, 2273, 2479, 2515, 2721, 2754
PspN4I GGNNCC 9 cut(s) 155, 345, 468, 498, 957, 1559, 1991, 2609, 2667
PspOMI GGGCCC 1 cut(s) 343
PspPI GGNCC 7 cut(s) 153, 343, 344, 467, 1482, 1558, 2608
PspPPI RGGWCCY 1 cut(s) 2608
PstI CTGCAG 2 cut(s) 2170, 2689
PstNI CAGNNNCTG 2 cut(s) 275, 2104
PsuI RGATCY 4 cut(s) 88, 496, 955, 1834
RsaI GTAC 2 cut(s) 1523, 2331
RsaNI GTAC 2 cut(s) 1522, 2330
RseI CAYNNNNRTG 5 cut(s) 1227, 1490, 2117, 2532, 2577
SacI GAGCTC 1 cut(s) 186
SacII CCGCGG 1 cut(s) 836
SapI GCTCTTC 1 cut(s) 2651
SatI GCNGC 8 cut(s) 279, 836, 1110, 1659, 2166, 2169, 2244, 2685
Sau96I GGNCC 7 cut(s) 153, 343, 344, 467, 1482, 1558, 2608
ScaI AGTACT 1 cut(s) 1523
SchI GAGTC 3 cut(s) 173, 275, 1958
SduI GDGCHC 2 cut(s) 186, 347
SexAI ACCWGGT 1 cut(s) 2721
SfaNI GCATC 5 cut(s) 277, 1141, 2091, 2150, 2500
SfcI CTRYAG 2 cut(s) 2166, 2685
Sfr303I CCGCGG 1 cut(s) 836
SgrBI CCGCGG 1 cut(s) 836
SinI GGWCC 3 cut(s) 153, 1558, 2608
SmiMI CAYNNNNRTG 5 cut(s) 1227, 1490, 2117, 2532, 2577
SmlI CTYRAG 4 cut(s) 45, 314, 416, 2333
SmoI CTYRAG 4 cut(s) 45, 314, 416, 2333
SseBI AGGCCT 2 cut(s) 1930, 2569
SsiI CCGC 3 cut(s) 833, 835, 2244
SspI AATATT 3 cut(s) 202, 988, 2058
SspMI CTAG 8 cut(s) 440, 786, 915, 1662, 1932, 1986, 2403, 2600
SstI GAGCTC 1 cut(s) 186
StuI AGGCCT 2 cut(s) 1930, 2569
StyI CCWWGG 3 cut(s) 683, 758, 914
TaaI ACNGT 4 cut(s) 37, 1562, 1699, 2384
TaiI ACGT 2 cut(s) 1647, 2653
TaqI TCGA 2 cut(s) 697, 899
TatI WGTACW 1 cut(s) 1521
TauI GCSGC 2 cut(s) 838, 2246
TfiI GAWTC 6 cut(s) 919, 1213, 1477, 1608, 2464, 2494
TscAI CASTG 7 cut(s) 42, 276, 333, 625, 1679, 2143, 2351
TseFI GTSAC 4 cut(s) 271, 2594, 2620, 2713
TseI GCWGC 6 cut(s) 278, 1109, 1658, 2165, 2168, 2684
Tsp45I GTSAC 4 cut(s) 271, 2594, 2620, 2713
TspGWI ACGGA 1 cut(s) 1878
TspRI CASTG 7 cut(s) 42, 276, 333, 625, 1679, 2143, 2351
Van91I CCANNNNNTGG 1 cut(s) 476
VpaK11BI GGWCC 3 cut(s) 153, 1558, 2608
XagI CCTNNNNNAGG 2 cut(s) 1159, 2556
XapI RAATTY 7 cut(s) 352, 387, 518, 623, 1387, 1402, 2759
XceI RCATGY 3 cut(s) 242, 516, 2227
XmaJI CCTAGG 1 cut(s) 914
XmiI GTMKAC 5 cut(s) 96, 1600, 1685, 2236, 2363
XspI CTAG 8 cut(s) 440, 786, 915, 1662, 1932, 1986, 2403, 2600
ZrmI AGTACT 1 cut(s) 1523
Zsp2I ATGCAT 1 cut(s) 244
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.