Rmu_sc0000117.1_g000032

Enhancer of polycomb-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000117.1
OG0008000
Physical Location & Seq
Forward (+)
160266 .. 163982
3717 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2529 bp
atgaggctggcgtcgccgttttctgagattgagagtttcgggtccgagtttgggactgagtcgactcggagatcgactcggagacgacgggctgcgagggagtcgaggaggaggccgagagtggtggtgcttcggaatttgaggaaggaaatgccatcggtggagatgaggaggaccacgagggttttcgggatggggaagggggtggacggagcccgagtcttgcgttcgggccgccgcctctggcccgagtcctctgtggtcaagcatgagagaaccaacgaggacgaggactggttcaagctcatcaagaacaatggggaaggtcgtgattctgacgcaattggtttaaagcataagggatggaccagagccacccggctagcgggtcataagcctaagccgaatatagttgtttccgtcagtcgagtccttgagaagcctgttgagactaagcttttggctgatgggctcaagcagtataagaggttcgggattgtatataccaggaagaggaaacggaccggtcactcggtcaatgttgtggagaatcaaagtggctctgaggatagaatgtacgggcagaggtttgctaggaagaggaggaagacaagtggcagtggcagcttggtaggagctgagaggttggatcttgcaagccctgaagtgcttcacattacatttgagtcttcatggggcagacgaaactgggctgctcggcttttgtattcgattttggtgtacatgtcgaggtccagcctgcagttgactgagctttctcaattccttgtctcggagcccctcagcattgtttttgccttgcctggcattaatttttcctgggtacgttcttccactattggctctggagtttgcaagttctttgggagcaaggagttcatgccaatgttttctgtggacttttctgcagttcctcaatgtttcacgctcatgcactccgaaatgcattttagatacatttttcggccaattcttcctgtaaattatctcaatgatgggcatgtagatgatgatgatgatgatgatgttaatcagtgtggcaatgacagtaatgagtgtgtagtcttgcatgaggttgatcacgccgaaaacagaccgttgcatccggttgtaaaagttcccaaattaggttgtagaagcacagtgtataggaatggtttaagttcacgaggtggtattcaaaagaggaggagttcattgaggaggaggagatctagaaatccttcttttgttgctttacggaaaccaaatggagccttggtttcagaattaaagaagaatggcctttccttttcttctgtagccttgaatcagaagcttaggaggtcagattcaacttgctctgcaacgaactcgaaagcagtgagttccaatgcggatagattggtgcaagatttagattcgacatgctgcactgcaaacttattggtctctgaatcagacagatgttatagggaagttggagtaaccattatgctagaaacctcttctgctggagagtggcttcttgtggtcaagaaagatggattaacgcgacttactcacaaagcagagaaagagaaagtaataaggccgggctctaaccgttttacacatgatataatctggtccccagatagtgatattttgaggctagagtttccggatcgaagtgagtggattactttcaaggagctttacagggaatgttctgatcgtaatgccaccattgagttcattcctgagcctgcttctgaccgtaatgccactgcaaaatccattcctgtgccaggggtgcgtgaagtcccaggttatgcagatagccacagttctccgtttctcataccagagtcatacatatctgtgaaggaagatgagttgtctagatcctttgcaaagaagacggcgaattatgacatggactctgaagatgaggaatggctgaagaagtctaacgtggactttgaagatcatgaacatgtttctgaggataaatttgaattaatggttgatgcctttgagaaggcattttacagtaaaccatatgatttctctgatggaattgctgctgctagtcattttctggacatggggaagagggatgtagtagaagctgtatatagttattggatgaataaaaggaagcagaaaaagtcgtcattgcttagggtcttccaggggcatcaagtgaaaagaccactgctggactccaagcctgttatgcgcaagagaagatcattcaaacgacagcctagtcaatttggcagaggaaaacaacctagtttcttgcaagcaatggctgcagaacaagatgctttgcaagaacagaatgctgtgcttaaagttgaagaggcgaaagcagcagcagacagatctgtggatttagctatccgtaaacgacagagagctcaggtacttatgcagaatgcagatttggcaacttacaaagctgcaatggcatttagaattgctgaagctgcccaagttcttggatcacccgatgctgctgcagtttatgtacttgattga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
EPL1

Protein Analysis

842

Amino Acids

95.58

Weight (kDa)

9.63

Isoelectric Point (pI)

59.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EPL1 PF10513 571 - 675 1.9e-13 Enhancer of polycomb-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2253
Acc16I TGCGCA 1 cut(s) 2225
AccI GTMKAC 1 cut(s) 62
AccII CGCG 1 cut(s) 1555
AccIII TCCGGA 1 cut(s) 1663
AciI CCGC 4 cut(s) 235, 238, 386, 1397
AclWI GGATC 4 cut(s) 657, 1674, 1881, 2500
AcoI YGGCCR 1 cut(s) 986
AcsI RAATTY 2 cut(s) 136, 1994
AcuI CTGAAG 4 cut(s) 684, 1947, 1964, 2493
AcyI GRCGYC 1 cut(s) 11
AdeI CACNNNGTG 1 cut(s) 1193
AfaI GTAC 5 cut(s) 578, 743, 846, 2415, 2520
AfiI CCNNNNNNNGG 6 cut(s) 51, 385, 513, 793, 1148, 1790
AflIII ACRYGT 2 cut(s) 744, 1978
AgeI ACCGGT 1 cut(s) 524
AgsI TTSAA 9 cut(s) 301, 1202, 1330, 1356, 1690, 1967, 2000, 2242, 2348
AjnI CCWGG 6 cut(s) 506, 823, 839, 1789, 1807, 2175
AjuI GAANNNNNNNTTGG 2 cut(s) 2417, 2449
Alw21I GWGCWC 1 cut(s) 2410
Alw26I GTCTC 4 cut(s) 76, 443, 796, 1456
AlwI GGATC 4 cut(s) 657, 1674, 1881, 2500
Ama87I CYCGRG 2 cut(s) 216, 248
Aor13HI TCCGGA 1 cut(s) 1663
AoxI GGCC 6 cut(s) 113, 232, 245, 986, 1303, 1592
ApoI RAATTY 2 cut(s) 136, 1994
ArsI GACNNNNNNTTYG 2 cut(s) 442, 474
AseI ATTAAT 2 cut(s) 831, 2003
AsiGI ACCGGT 1 cut(s) 524
Asp700I GAANNNNTTC 2 cut(s) 669, 1243
AspLEI GCGC 1 cut(s) 2226
AspS9I GGNCC 8 cut(s) 42, 174, 232, 246, 366, 522, 753, 1629
AsuC2I CCSGG 2 cut(s) 379, 1596
AsuHPI GGTGA 1 cut(s) 2487
AsuNHI GCTAGC 1 cut(s) 382
AvaI CYCGRG 2 cut(s) 216, 248
AvaII GGWCC 6 cut(s) 42, 174, 366, 522, 753, 1629
BanII GRGCYC 5 cut(s) 217, 474, 801, 1601, 2410
BarI GAAGNNNNNNTAC 2 cut(s) 2015, 2047
BauI CACGAG 2 cut(s) 178, 1188
BbsI GAAGAC 4 cut(s) 614, 681, 1907, 2164
Bbv12I GWGCWC 1 cut(s) 2410
BbvCI CCTCAGC 1 cut(s) 803
BccI CCATC 7 cut(s) 163, 187, 357, 461, 1010, 1538, 2051
BceAI ACGGC 1 cut(s) 1920
BcgI CGANNNNNNTGC 4 cut(s) 1356, 1390, 2489, 2523
BciT130I CCWGG 6 cut(s) 508, 825, 841, 1791, 1809, 2177
BclI TGATCA 1 cut(s) 1099
BcnI CCSGG 2 cut(s) 379, 1596
BcoDI GTCTC 4 cut(s) 76, 443, 796, 1456
BfaI CTAG 9 cut(s) 383, 594, 1236, 1499, 1655, 1884, 2073, 2253, 2280
BfmI CTRYAG 5 cut(s) 761, 927, 1320, 2301, 2508
BglII AGATCT 2 cut(s) 1232, 2372
Bme1390I CCNGG 8 cut(s) 379, 508, 825, 841, 1596, 1791, 1809, 2177
Bme18I GGWCC 6 cut(s) 42, 174, 366, 522, 753, 1629
BmeT110I CYCGRG 2 cut(s) 216, 248
BmgT120I GGNCC 8 cut(s) 42, 174, 232, 246, 366, 522, 753, 1629
BmiI GGNNCC 5 cut(s) 43, 214, 798, 1276, 1631
BmrFI CCNGG 8 cut(s) 379, 508, 825, 841, 1596, 1791, 1809, 2177
BmrI ACTGGG 1 cut(s) 718
BmsI GCATC 5 cut(s) 1132, 2002, 2191, 2302, 2491
BmtI GCTAGC 1 cut(s) 386
BmuI ACTGGG 1 cut(s) 718
BpiI GAAGAC 4 cut(s) 614, 681, 1907, 2164
BplI GAGNNNNNCTC 2 cut(s) 61, 93
BpmI CTGGAG 2 cut(s) 888, 1536
Bpu10I CCTNAGC 6 cut(s) 399, 803, 1340, 1743, 2165, 2409
BpuEI CTTGAG 2 cut(s) 455, 458
BpuMI CCSGG 2 cut(s) 379, 1596
BsaBI GATNNNNATC 1 cut(s) 1050
BsaHI GRCGYC 1 cut(s) 11
BsaI GGTCTC 1 cut(s) 1456
BsaJI CCNNGG 5 cut(s) 840, 1278, 1790, 1807, 2176
BsaWI WCCGGW 3 cut(s) 524, 1126, 1663
BsaXI ACNNNNNCTCC 4 cut(s) 204, 234, 1266, 1296
Bsc4I CCNNNNNNNGG 6 cut(s) 51, 385, 513, 793, 1148, 1790
Bse118I RCCGGY 1 cut(s) 524
Bse1I ACTGG 2 cut(s) 299, 713
Bse3DI GCAATG 4 cut(s) 1069, 2159, 2301, 2460
Bse8I GATNNNNATC 1 cut(s) 1050
BseAI TCCGGA 1 cut(s) 1663
BseBI CCWGG 6 cut(s) 508, 825, 841, 1791, 1809, 2177
BseDI CCNNGG 5 cut(s) 840, 1278, 1790, 1807, 2176
BseGI GGATG 5 cut(s) 198, 368, 1123, 2107, 2136
BseJI GATNNNNATC 1 cut(s) 1050
BseLI CCNNNNNNNGG 6 cut(s) 51, 385, 513, 793, 1148, 1790
BseMI GCAATG 4 cut(s) 1069, 2159, 2301, 2460
BseMII CTCAG 9 cut(s) 15, 48, 555, 630, 762, 817, 1734, 1977, 2423
BseNI ACTGG 2 cut(s) 299, 713
BseRI GAGGAG 9 cut(s) 121, 124, 184, 616, 1222, 1225, 1237, 1240, 1243
BsgI GTGCAG 1 cut(s) 1417
Bsh1236I CGCG 1 cut(s) 1555
BshFI GGCC 6 cut(s) 115, 234, 247, 988, 1305, 1594
BshTI ACCGGT 1 cut(s) 524
BsiHKAI GWGCWC 1 cut(s) 2410
BsiHKCI CYCGRG 2 cut(s) 216, 248
BsiSI CCGG 5 cut(s) 379, 525, 1127, 1595, 1664
BslFI GGGAC 3 cut(s) 67, 1615, 1790
BslI CCNNNNNNNGG 6 cut(s) 51, 385, 513, 793, 1148, 1790
BsmAI GTCTC 4 cut(s) 76, 443, 796, 1456
BsmBI CGTCTC 1 cut(s) 76
BsmFI GGGAC 3 cut(s) 67, 1615, 1790
BsmI GAATGC 2 cut(s) 2335, 2431
BsnI GGCC 6 cut(s) 115, 234, 247, 988, 1305, 1594
Bso31I GGTCTC 1 cut(s) 1456
BsoBI CYCGRG 2 cut(s) 216, 248
Bsp1286I GDGCHC 5 cut(s) 217, 474, 801, 1601, 2410
Bsp13I TCCGGA 1 cut(s) 1663
Bsp1407I TGTACA 1 cut(s) 741
BspACI CCGC 4 cut(s) 235, 238, 386, 1397
BspANI GGCC 6 cut(s) 115, 234, 247, 988, 1305, 1594
BspCNI CTCAG 9 cut(s) 16, 49, 556, 631, 763, 816, 1735, 1978, 2422
BspEI TCCGGA 1 cut(s) 1663
BspFNI CGCG 1 cut(s) 1555
BspHI TCATGA 1 cut(s) 1972
BspLI GGNNCC 5 cut(s) 43, 214, 798, 1276, 1631
BspMAI CTGCAG 4 cut(s) 765, 931, 2305, 2512
BspOI GCTAGC 1 cut(s) 386
BspPI GGATC 4 cut(s) 657, 1674, 1881, 2500
BspTNI GGTCTC 1 cut(s) 1456
BsrDI GCAATG 4 cut(s) 1069, 2159, 2301, 2460
BsrFI RCCGGY 1 cut(s) 524
BsrGI TGTACA 1 cut(s) 741
BsrI ACTGG 2 cut(s) 299, 713
BssAI RCCGGY 1 cut(s) 524
BssECI CCNNGG 5 cut(s) 840, 1278, 1790, 1807, 2176
BssNI GRCGYC 1 cut(s) 11
BssSI CACGAG 2 cut(s) 178, 1188
BssT1I CCWWGG 1 cut(s) 1278
Bst2BI CACGAG 2 cut(s) 178, 1188
Bst2UI CCWGG 6 cut(s) 508, 825, 841, 1791, 1809, 2177
Bst4CI ACNGT 7 cut(s) 1070, 1119, 1165, 1607, 1760, 1829, 2036
Bst6I CTCTTC 5 cut(s) 506, 593, 1513, 2090, 2343
BstACI GRCGYC 1 cut(s) 11
BstAPI GCANNNNNTGC 1 cut(s) 2300
BstAUI TGTACA 1 cut(s) 741
BstC8I GCNNGC 6 cut(s) 9, 384, 658, 761, 1749, 2292
BstENI CCTNNNNNAGG 1 cut(s) 1788
BstF5I GGATG 5 cut(s) 198, 368, 1123, 2107, 2136
BstFNI CGCG 1 cut(s) 1555
BstHHI GCGC 1 cut(s) 2226
BstMAI GTCTC 4 cut(s) 76, 443, 796, 1456
BstMWI GCNNNNNNNGC 9 cut(s) 13, 624, 1795, 2221, 2300, 2360, 2435, 2456, 2477
BstNI CCWGG 6 cut(s) 508, 825, 841, 1791, 1809, 2177
BstNSI RCATGY 4 cut(s) 748, 1025, 1431, 1982
BstSCI CCNGG 8 cut(s) 377, 506, 823, 839, 1594, 1789, 1807, 2175
BstSFI CTRYAG 5 cut(s) 761, 927, 1320, 2301, 2508
BstUI CGCG 1 cut(s) 1555
BstV2I GAAGAC 4 cut(s) 614, 681, 1907, 2164
BstX2I RGATCY 4 cut(s) 649, 1232, 1886, 2372
BstXI CCANNNNNNTGG 1 cut(s) 2489
BstYI RGATCY 4 cut(s) 649, 1232, 1886, 2372
BsuRI GGCC 6 cut(s) 115, 234, 247, 988, 1305, 1594
BtsCI GGATG 5 cut(s) 198, 368, 1123, 2107, 2136
BtsI GCAGTG 5 cut(s) 625, 1389, 1434, 1767, 2198
BtsIMutI CAGTG 7 cut(s) 625, 1061, 1170, 1389, 1434, 1767, 2198
Cac8I GCNNGC 6 cut(s) 9, 384, 658, 761, 1749, 2292
CciI TCATGA 1 cut(s) 1972
CfoI GCGC 1 cut(s) 2226
Cfr10I RCCGGY 1 cut(s) 524
Cfr13I GGNCC 8 cut(s) 42, 174, 232, 246, 366, 522, 753, 1629
CpoI CGGWCCG 1 cut(s) 522
CseI GACGC 1 cut(s) 347
Csp6I GTAC 5 cut(s) 577, 742, 845, 2414, 2519
CspAI ACCGGT 1 cut(s) 524
CspI CGGWCCG 1 cut(s) 522
CviQI GTAC 5 cut(s) 577, 742, 845, 2414, 2519
DraI TTTAAA 1 cut(s) 351
DraIII CACNNNGTG 1 cut(s) 1193
DrdI GACNNNNNNGTC 1 cut(s) 2253
DseDI GACNNNNNNGTC 1 cut(s) 2253
EaeI YGGCCR 1 cut(s) 986
Eam1104I CTCTTC 5 cut(s) 506, 593, 1513, 2090, 2343
EarI CTCTTC 5 cut(s) 506, 593, 1513, 2090, 2343
Ecl136II GAGCTC 1 cut(s) 2408
Eco130I CCWWGG 1 cut(s) 1278
Eco24I GRGCYC 5 cut(s) 217, 474, 801, 1601, 2410
Eco31I GGTCTC 1 cut(s) 1456
Eco47I GGWCC 6 cut(s) 42, 174, 366, 522, 753, 1629
Eco53kI GAGCTC 1 cut(s) 2408
Eco57I CTGAAG 4 cut(s) 684, 1947, 1964, 2493
Eco88I CYCGRG 2 cut(s) 216, 248
EcoICRI GAGCTC 1 cut(s) 2408
EcoNI CCTNNNNNAGG 1 cut(s) 1788
EcoRII CCWGG 6 cut(s) 506, 823, 839, 1789, 1807, 2175
EcoT14I CCWWGG 1 cut(s) 1278
EcoT22I ATGCAT 1 cut(s) 969
EcoT38I GRGCYC 5 cut(s) 217, 474, 801, 1601, 2410
ErhI CCWWGG 1 cut(s) 1278
Esp3I CGTCTC 1 cut(s) 76
FaqI GGGAC 3 cut(s) 67, 1615, 1790
FauI CCCGC 1 cut(s) 379
FauNDI CATATG 1 cut(s) 2044
FbaI TGATCA 1 cut(s) 1099
FblI GTMKAC 1 cut(s) 62
FokI GGATG 5 cut(s) 205, 375, 1110, 2114, 2143
FriOI GRGCYC 5 cut(s) 217, 474, 801, 1601, 2410
FspBI CTAG 9 cut(s) 383, 594, 1236, 1499, 1655, 1884, 2073, 2253, 2280
FspI TGCGCA 1 cut(s) 2225
GlaI GCGC 1 cut(s) 2225
GsuI CTGGAG 2 cut(s) 888, 1536
HaeIII GGCC 6 cut(s) 115, 234, 247, 988, 1305, 1594
HapII CCGG 5 cut(s) 379, 525, 1127, 1595, 1664
HgaI GACGC 1 cut(s) 347
HhaI GCGC 1 cut(s) 2226
Hin1I GRCGYC 1 cut(s) 11
Hin6I GCGC 1 cut(s) 2224
HinP1I GCGC 1 cut(s) 2224
HincII GTYRAC 2 cut(s) 63, 768
HindII GTYRAC 2 cut(s) 63, 768
HindIII AAGCTT 2 cut(s) 455, 1337
HpaII CCGG 5 cut(s) 379, 525, 1127, 1595, 1664
HphI GGTGA 1 cut(s) 2487
Hpy166II GTNNAC 9 cut(s) 63, 208, 742, 768, 919, 1187, 1960, 2039, 2396
Hpy8I GTNNAC 9 cut(s) 63, 208, 742, 768, 919, 1187, 1960, 2039, 2396
Hpy99I CGWCG 2 cut(s) 16, 90
HpyAV CCTTC 6 cut(s) 139, 193, 317, 1254, 1861, 2017
HpyCH4III ACNGT 7 cut(s) 1070, 1119, 1165, 1607, 1760, 1829, 2036
HpyCH4IV ACGT 2 cut(s) 847, 1956
HpyF10VI GCNNNNNNNGC 9 cut(s) 13, 624, 1795, 2221, 2300, 2360, 2435, 2456, 2477
HpySE526I ACGT 2 cut(s) 847, 1956
Hsp92I GRCGYC 1 cut(s) 11
HspAI GCGC 1 cut(s) 2224
Kpn2I TCCGGA 1 cut(s) 1663
Ksp22I TGATCA 1 cut(s) 1099
LmnI GCTCC 6 cut(s) 212, 635, 796, 888, 1274, 1693
LweI GCATC 5 cut(s) 1132, 2002, 2191, 2302, 2491
MaeI CTAG 9 cut(s) 383, 594, 1236, 1499, 1655, 1884, 2073, 2253, 2280
MaeII ACGT 2 cut(s) 847, 1956
MaeIII GTNAC 2 cut(s) 527, 1486
MfeI CAATTG 1 cut(s) 342
MflI RGATCY 4 cut(s) 649, 1232, 1886, 2372
MhlI GDGCHC 5 cut(s) 217, 474, 801, 1601, 2410
MmeI TCCRAC 2 cut(s) 627, 1462
Mph1103I ATGCAT 1 cut(s) 969
MroI TCCGGA 1 cut(s) 1663
MroXI GAANNNNTTC 2 cut(s) 669, 1243
MseI TTAA 8 cut(s) 350, 831, 1050, 1181, 1292, 1550, 2003, 2340
MslI CAYNNNNRTG 6 cut(s) 905, 950, 1026, 1784, 1862, 1977
MspI CCGG 5 cut(s) 379, 525, 1127, 1595, 1664
MspR9I CCNGG 8 cut(s) 379, 508, 825, 841, 1596, 1791, 1809, 2177
MunI CAATTG 1 cut(s) 342
Mva1269I GAATGC 2 cut(s) 2335, 2431
MvaI CCWGG 6 cut(s) 508, 825, 841, 1791, 1809, 2177
MvnI CGCG 1 cut(s) 1555
MwoI GCNNNNNNNGC 9 cut(s) 13, 624, 1795, 2221, 2300, 2360, 2435, 2456, 2477
NciI CCSGG 2 cut(s) 379, 1596
NdeI CATATG 1 cut(s) 2044
NheI GCTAGC 1 cut(s) 382
NlaIV GGNNCC 5 cut(s) 43, 214, 798, 1276, 1631
NmeAIII GCCGAG 2 cut(s) 141, 697
NmuCI GTSAC 1 cut(s) 527
NsbI TGCGCA 1 cut(s) 2225
NsiI ATGCAT 1 cut(s) 969
NspI RCATGY 4 cut(s) 748, 1025, 1431, 1982
PagI TCATGA 1 cut(s) 1972
PciI ACATGT 2 cut(s) 744, 1978
PctI GAATGC 2 cut(s) 2335, 2431
PdmI GAANNNNTTC 2 cut(s) 669, 1243
PfeI GAWTC 6 cut(s) 332, 550, 1330, 1352, 1421, 1457
PflFI GACNNNGTC 1 cut(s) 58
PinAI ACCGGT 1 cut(s) 524
PscI ACATGT 2 cut(s) 744, 1978
PshBI ATTAAT 2 cut(s) 831, 2003
Psp124BI GAGCTC 1 cut(s) 2410
Psp6I CCWGG 6 cut(s) 506, 823, 839, 1789, 1807, 2175
PspGI CCWGG 6 cut(s) 506, 823, 839, 1789, 1807, 2175
PspN4I GGNNCC 5 cut(s) 43, 214, 798, 1276, 1631
PspPI GGNCC 8 cut(s) 42, 174, 232, 246, 366, 522, 753, 1629
PsrI GAACNNNNNNTAC 2 cut(s) 473, 505
PstI CTGCAG 4 cut(s) 765, 931, 2305, 2512
PsuI RGATCY 4 cut(s) 649, 1232, 1886, 2372
PsyI GACNNNGTC 1 cut(s) 58
RsaI GTAC 5 cut(s) 578, 743, 846, 2415, 2520
RsaNI GTAC 5 cut(s) 577, 742, 845, 2414, 2519
RseI CAYNNNNRTG 6 cut(s) 905, 950, 1026, 1784, 1862, 1977
Rsr2I CGGWCCG 1 cut(s) 522
RsrII CGGWCCG 1 cut(s) 522
SacI GAGCTC 1 cut(s) 2410
SalI GTCGAC 1 cut(s) 61
SaqAI TTAA 8 cut(s) 350, 831, 1050, 1181, 1292, 1550, 2003, 2340
Sau96I GGNCC 8 cut(s) 42, 174, 232, 246, 366, 522, 753, 1629
ScrFI CCNGG 8 cut(s) 379, 508, 825, 841, 1596, 1791, 1809, 2177
SduI GDGCHC 5 cut(s) 217, 474, 801, 1601, 2410
SfaNI GCATC 5 cut(s) 1132, 2002, 2191, 2302, 2491
SfcI CTRYAG 5 cut(s) 761, 927, 1320, 2301, 2508
SinI GGWCC 6 cut(s) 42, 174, 366, 522, 753, 1629
SmiMI CAYNNNNRTG 6 cut(s) 905, 950, 1026, 1784, 1862, 1977
SmlI CTYRAG 2 cut(s) 434, 473
SmoI CTYRAG 2 cut(s) 434, 473
SsiI CCGC 4 cut(s) 235, 238, 386, 1397
SspMI CTAG 9 cut(s) 383, 594, 1236, 1499, 1655, 1884, 2073, 2253, 2280
SstI GAGCTC 1 cut(s) 2410
StyD4I CCNGG 8 cut(s) 377, 506, 823, 839, 1594, 1789, 1807, 2175
StyI CCWWGG 1 cut(s) 1278
TaaI ACNGT 7 cut(s) 1070, 1119, 1165, 1607, 1760, 1829, 2036
TaiI ACGT 2 cut(s) 850, 1959
TaqI TCGA 9 cut(s) 62, 74, 104, 427, 731, 749, 1376, 1424, 1669
TaqII GACCGA 1 cut(s) 523
TatI WGTACW 2 cut(s) 741, 2518
TauI GCSGC 2 cut(s) 237, 240
TfiI GAWTC 6 cut(s) 332, 550, 1330, 1352, 1421, 1457
Tru1I TTAA 8 cut(s) 350, 831, 1050, 1181, 1292, 1550, 2003, 2340
Tru9I TTAA 8 cut(s) 350, 831, 1050, 1181, 1292, 1550, 2003, 2340
TscAI CASTG 7 cut(s) 625, 1061, 1170, 1389, 1441, 1774, 2205
TseFI GTSAC 1 cut(s) 527
Tsp45I GTSAC 1 cut(s) 527
TspDTI ATGAA 6 cut(s) 681, 889, 1206, 1726, 1989, 2147
TspGWI ACGGA 6 cut(s) 225, 409, 535, 1276, 1824, 2381
TspRI CASTG 7 cut(s) 625, 1061, 1170, 1389, 1441, 1774, 2205
Tth111I GACNNNGTC 1 cut(s) 58
VpaK11BI GGWCC 6 cut(s) 42, 174, 366, 522, 753, 1629
VspI ATTAAT 2 cut(s) 831, 2003
XagI CCTNNNNNAGG 1 cut(s) 1788
XapI RAATTY 2 cut(s) 136, 1994
XbaI TCTAGA 2 cut(s) 1235, 1883
XceI RCATGY 4 cut(s) 748, 1025, 1431, 1982
XmiI GTMKAC 1 cut(s) 62
XmnI GAANNNNTTC 2 cut(s) 669, 1243
XspI CTAG 9 cut(s) 383, 594, 1236, 1499, 1655, 1884, 2073, 2253, 2280
Zsp2I ATGCAT 1 cut(s) 969
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.