Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000195.1

Orthogroup ID

OG0007712

Physical Location & Seq

Genomic Coordinates Forward (+)

142327 .. 148512

Gene Structure 6186 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2385 bp

atggcaccgccaataatgttgttgcttctcctagcttcgttcttgattccaacgcagacccaattccaagtcgaagccaaagaccaggcctttacctccatagtcatatcccaaaagggtcttgattttcttaaggaattgctggtgaccgaagctgtgtcttccataattccactccaagttccgcaaattaagaaatcgatgcgggtcccgtttctggggagtgtttatatggtgctttccaatatcacaatctatggaatcgatgtgggttcgtcttatattaagctgggtgatgatgggattgctattattgcttcggagacgacttgtaatttgagcatgaattggtattattcgtatagtacttgggttgcgccggttgaggtttccgatgaaggcagtgcctctgtaaaggttgaaggcgtggaagttgggcttacattaggcttggggatccaagaaggaactctgaagctttccctgaaggactgtggttgtcatgttaaggagatttccataaaattggatggaggagcctcttggttttatcaagggatgattaatgcatttgaagaacaaataggatctgcagtggaaaattctatcaccaaaaaacttaaagatggaattgtaaagctcgattcagttctgcaagctcttccaaaggaaatcccattagatgatgatacttatttgaatgcaacttttgtaaatgacccagttttgagtaattcttccataggatttgagattaatggtttatttactgcacgaagaaagccttccgtctccgagtaccataacaaggattcaaaagcattagttgcatgctcggatccatctaaaatgcttggaatagcattggatgaggctgtgtttaactctgtagcagccacatactttgatgcagaatttatgcaatggactgtggacaagataccagatcagtcttttttgaacactgctggatggagattcattattccccaactatacaagaaatacccaaaccatgatatgaacttgaatatttctttatcttctccaccagtcataaagatctcagagcataatattggagctatcatctatgctgacctgatcattgatgtattggacgaaaacagtgtaataccagttgcatgcatctcattggtcattcgtgcatcaagttcagttaaactctcgggcaataaccttgccggcagcatgaaagtggatgacttttctatgtcattgaagtggagcaatattggcaatcttcgtatgtatctcattcagccggtggtttggacggtcattcagactgtttttgtgccatatgtgaactcacacctcggaaagggaatcccactaccaatcgttcacggattcaccattcagaatggcgaactactctgctcgggttcaagaattatggtttgcagcgacgtgacatacgaaccatcagattcacacaatcttaaatggttcctacgaatgggccgggctatcgaggacgacgagtaccggatagcccggaaccaggttctccgaaaaggtgtggacttggagggctactccattgaggggctctccgtcgggggtcatgagacttgtatcattattccggagtttaagtgtgctttcgatatcggcaggtgtccctccagagccattcatcagaattttctcttcatcactcatgcccatcttgaccacattggtgggctgccgatgtatatagccagccgtggtttgtacaacttaaagcctccgactgtgttcgtgcctccttgtattaaagaggatgtggagaagctgatggacattcacaggagcatgggacatgtggagctggaacttgaattggttgcattggatgtgggtgaaacatatgagctgcggaataaccttgttgtccggccatttaggactcagcatgccatacccagccagggttatgttatttactcggttagaaaaaaactgaagaagcagtacatgcatctgaaagggaaacagattgagaaattgaaaaagtctggtactgagattacagacactatattgtcaccagaggtggccttcacaggggatacaacatcggagtatatgctggatccacgtaatgctgatgccttgagggcaaagattctcataactgaggcaacttttctggatgaaggattcagtattgaggatgcacgacaacatggtcatacgcatataaatgagatcattgaaaatgctcagtggattagaaataaggcaattttgttgacccatttctcctcccgctaccatttagaggacattcgtcaagctgtatcaaggttgcagtctaaggtgtcagcgaaagtggtccctcttacagaaggtttcaaatccatgcacacttag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001530 GO:0003674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0008150 GO:0008152 GO:0008289 GO:0009058 GO:0009987 GO:0010468 GO:0016020 GO:0019222 GO:0031090 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0050789 GO:0060255 GO:0065007 GO:0072593 GO:0097367 GO:0098588 GO:0098805 GO:1903409

KEGG Pathways

Metabolic & Signaling

ko04064 ko04620 ko05132 ko05152 map04064 map04620 map05132 map05152

Pfam Domains

Protein Families

LBP_BPI_CETP LBP_BPI_CETP_C

Protein Analysis

794

Amino Acids

88.31

Weight (kDa)

5.91

Isoelectric Point (pI)

38.6

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LBP_BPI_CETP	PF01273	40 - 215	8e-23	LBP / BPI / CETP family, N-terminal domain
LBP_BPI_CETP_C	PF02886	279 - 480	4.3e-28	LBP / BPI / CETP family, C-terminal domain
Lactamase_B_2	PF12706	557 - 758	6.6e-10	Beta-lactamase superfamily domain
Anti-Pycsar_Apyc1	PF23023	558 - 761	8.6e-07	Anti-Pycsar protein Apyc1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007712)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G04970 AT1G04970 AT1G04970
fragaria_vesca	FvH4_6g41770 FvH4_6g41770 FvH4_6g41770
malus_domestica	MD09G1117400.v1.1
prunus_persica	Prupe.3G206400_v2.0.a1
pyrus_communis	pycom09g04250 pycom16g16220
rosa_chinensis	RchiOBHm_Chr2g0157551
rosa_laevigata	RLG00000020997
rosa_multiflora	Rmu_co8387293.1_g000001 Rmu_sc0000195.1_g000041 Rmu_sc0000861.1_g000014
rosa_roxburghii	Rroxscaffold_2G00092130
rosa_rugosa	Rorug02G0462000 Rorug06G0244900
rosa_samantha	Rh2AG526100 Rh2BG540800 Rh2CG510800 Rh2DG549300 Rh6AG379800
rosa_wichuraiana	Rw2G043580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1632
AasI	GACNNNNNNGTC	1 cut(s)	2199
Acc36I	ACCTGC	1 cut(s)	1632
AccB1I	GGYRCC	1 cut(s)	4
AccIII	TCCGGA	1 cut(s)	1612
AciI	CCGC	5 cut(s)	8, 185, 205, 1888, 2281
AclWI	GGATC	7 cut(s)	451, 464, 595, 833, 846, 2099, 2112
AcoI	YGGCCR	1 cut(s)	1907
AcsI	RAATTY	3 cut(s)	601, 914, 1669
AcuI	CTGAAG	3 cut(s)	494, 506, 1994
AfaI	GTAC	6 cut(s)	367, 800, 1511, 1745, 1985, 2032
AflII	CTTAAG	1 cut(s)	131
AflIII	ACRYGT	1 cut(s)	1831
AjiI	CACGTC	1 cut(s)	1435
AjnI	CCWGG	3 cut(s)	84, 1527, 1938
AleI	CACNNNNGTG	1 cut(s)	1707
Alw26I	GTCTC	3 cut(s)	317, 796, 1589
AlwI	GGATC	7 cut(s)	451, 464, 595, 833, 846, 2099, 2112
Ama87I	CYCGRG	2 cut(s)	1189, 1405
Aor13HI	TCCGGA	1 cut(s)	1612
AoxI	GGCC	4 cut(s)	87, 1486, 1907, 2067
ApeKI	GCWGC	5 cut(s)	893, 1209, 1428, 1714, 1885
ApoI	RAATTY	3 cut(s)	601, 914, 1669
ArsI	GACNNNNNNTTYG	2 cut(s)	319, 351
AseI	ATTAAT	2 cut(s)	564, 756
Asp700I	GAANNNNTTC	1 cut(s)	784
AspLEI	GCGC	1 cut(s)	379
AspS9I	GGNCC	3 cut(s)	208, 1486, 2347
AsuC2I	CCSGG	2 cut(s)	1490, 1522
AsuHPI	GGTGA	6 cut(s)	157, 305, 601, 1369, 1883, 2049
AvaI	CYCGRG	2 cut(s)	1189, 1405
AvaII	GGWCC	2 cut(s)	208, 2347
BamHI	GGATCC	3 cut(s)	456, 838, 2104
BanI	GGYRCC	1 cut(s)	4
BanII	GRGCYC	1 cut(s)	1578
BarI	GAAGNNNNNNTAC	2 cut(s)	1967, 1999
BbsI	GAAGAC	1 cut(s)	153
BbvI	GCAGC	5 cut(s)	905, 1221, 1440, 1701, 1872
BccI	CCATC	8 cut(s)	293, 524, 620, 850, 966, 1456, 1701, 1801
BceAI	ACGGC	1 cut(s)	1719
BciT130I	CCWGG	3 cut(s)	86, 1529, 1940
BciVI	GTATCC	1 cut(s)	2074
BclI	TGATCA	1 cut(s)	1104
BcnI	CCSGG	2 cut(s)	1490, 1522
BcoDI	GTCTC	3 cut(s)	317, 796, 1589
BfaI	CTAG	1 cut(s)	32
BfmI	CTRYAG	2 cut(s)	591, 888
BfrI	CTTAAG	1 cut(s)	131
BfuAI	ACCTGC	1 cut(s)	1632
BfuI	GTATCC	1 cut(s)	2074
BglI	GCCNNNNNGGC	1 cut(s)	2129
BglII	AGATCT	1 cut(s)	1062
BisI	GCNGC	5 cut(s)	894, 1210, 1429, 1715, 1886
BlsI	GCNGC	5 cut(s)	895, 1211, 1430, 1716, 1887
BmcAI	AGTACT	1 cut(s)	367
Bme1390I	CCNGG	5 cut(s)	86, 1490, 1522, 1529, 1940
Bme18I	GGWCC	2 cut(s)	208, 2347
BmeT110I	CYCGRG	2 cut(s)	1189, 1405
BmgBI	CACGTC	1 cut(s)	1435
BmgT120I	GGNCC	3 cut(s)	208, 1486, 2347
BmrFI	CCNGG	5 cut(s)	86, 1490, 1522, 1529, 1940
BmrI	ACTGGG	1 cut(s)	716
BmsI	GCATC	7 cut(s)	192, 898, 1158, 1178, 1999, 2110, 2176
BmuI	ACTGGG	1 cut(s)	716
BoxI	GACNNNNGTC	1 cut(s)	2301
BpiI	GAAGAC	1 cut(s)	153
BplI	GAGNNNNNCTC	4 cut(s)	1547, 1579, 1562, 1594
BpmI	CTGGAG	1 cut(s)	1636
BpuEI	CTTGAG	1 cut(s)	2146
BpuMI	CCSGG	2 cut(s)	1490, 1522
Bsa29I	ATCGAT	2 cut(s)	200, 264
BsaAI	YACGTR	1 cut(s)	2111
BsaJI	CCNNGG	3 cut(s)	1339, 1735, 1939
BsaWI	WCCGGW	2 cut(s)	1512, 1612
BsaXI	ACNNNNNCTCC	2 cut(s)	1607, 1637
Bse118I	RCCGGY	3 cut(s)	379, 1205, 1285
Bse1I	ACTGG	3 cut(s)	722, 1052, 1139
Bse3DI	GCAATG	1 cut(s)	929
BseAI	TCCGGA	1 cut(s)	1612
BseBI	CCWGG	3 cut(s)	86, 1529, 1940
BseCI	ATCGAT	2 cut(s)	200, 264
BseDI	CCNNGG	3 cut(s)	1339, 1735, 1939
BseGI	GGATG	9 cut(s)	535, 564, 874, 977, 1228, 1798, 1870, 2170, 2191
BseMI	GCAATG	1 cut(s)	929
BseMII	CTCAG	5 cut(s)	1080, 1934, 2025, 2139, 2249
BseNI	ACTGG	3 cut(s)	722, 1052, 1139
BseRI	GAGGAG	2 cut(s)	549, 2266
BseXI	GCAGC	5 cut(s)	905, 1221, 1440, 1701, 1872
BseYI	CCCAGC	2 cut(s)	289, 1934
BsgI	GTGCAG	1 cut(s)	756
BshFI	GGCC	4 cut(s)	89, 1488, 1909, 2069
BshNI	GGYRCC	1 cut(s)	4
BshVI	ATCGAT	2 cut(s)	200, 264
BsiHKCI	CYCGRG	2 cut(s)	1189, 1405
BsiSI	CCGG	8 cut(s)	380, 1206, 1286, 1489, 1513, 1522, 1613, 1906
BslFI	GGGAC	4 cut(s)	194, 1632, 1842, 2333
BsmAI	GTCTC	3 cut(s)	317, 796, 1589
BsmBI	CGTCTC	2 cut(s)	317, 796
BsmFI	GGGAC	4 cut(s)	194, 1632, 1842, 2333
BsmI	GAATGC	1 cut(s)	706
BsnI	GGCC	4 cut(s)	89, 1488, 1909, 2069
BsoBI	CYCGRG	2 cut(s)	1189, 1405
Bsp1286I	GDGCHC	1 cut(s)	1578
Bsp13I	TCCGGA	1 cut(s)	1612
Bsp1407I	TGTACA	1 cut(s)	1743
Bsp143I	GATC	8 cut(s)	456, 587, 838, 946, 1062, 1104, 2104, 2220
BspACI	CCGC	5 cut(s)	8, 185, 205, 1888, 2281
BspANI	GGCC	4 cut(s)	89, 1488, 1909, 2069
BspCNI	CTCAG	5 cut(s)	1079, 1933, 2026, 2140, 2248
BspDI	ATCGAT	2 cut(s)	200, 264
BspEI	TCCGGA	1 cut(s)	1612
BspHI	TCATGA	1 cut(s)	1591
BspMAI	CTGCAG	1 cut(s)	595
BspMI	ACCTGC	1 cut(s)	1632
BspPI	GGATC	7 cut(s)	451, 464, 595, 833, 846, 2099, 2112
BspQI	GCTCTTC	1 cut(s)	666
BspT107I	GGYRCC	1 cut(s)	4
BspTI	CTTAAG	1 cut(s)	131
BsrDI	GCAATG	1 cut(s)	929
BsrFI	RCCGGY	3 cut(s)	379, 1205, 1285
BsrGI	TGTACA	1 cut(s)	1743
BsrI	ACTGG	3 cut(s)	722, 1052, 1139
BssAI	RCCGGY	3 cut(s)	379, 1205, 1285
BssECI	CCNNGG	3 cut(s)	1339, 1735, 1939
BssMI	GATC	8 cut(s)	456, 587, 838, 946, 1062, 1104, 2104, 2220
Bst2UI	CCWGG	3 cut(s)	86, 1529, 1940
Bst4CI	ACNGT	6 cut(s)	494, 931, 1130, 1300, 1312, 1765
Bst6I	CTCTTC	2 cut(s)	666, 1682
BstAFI	CTTAAG	1 cut(s)	131
BstAPI	GCANNNNNTGC	2 cut(s)	827, 1987
BstAUI	TGTACA	1 cut(s)	1743
BstBAI	YACGTR	1 cut(s)	2111
BstC8I	GCNNGC	6 cut(s)	657, 832, 1147, 1207, 1732, 1926
BstDEI	CTNAG	7 cut(s)	1066, 1920, 2034, 2148, 2235, 2328, 2382
BstDSI	CCRYGG	1 cut(s)	1735
BstEII	GGTNACC	1 cut(s)	145
BstENI	CCTNNNNNAGG	1 cut(s)	1343
BstF5I	GGATG	9 cut(s)	535, 564, 874, 977, 1228, 1798, 1870, 2170, 2191
BstHHI	GCGC	1 cut(s)	379
BstKTI	GATC	8 cut(s)	459, 590, 841, 949, 1065, 1107, 2107, 2223
BstMAI	GTCTC	3 cut(s)	317, 796, 1589
BstMBI	GATC	8 cut(s)	456, 587, 838, 946, 1062, 1104, 2104, 2220
BstMWI	GCNNNNNNNGC	5 cut(s)	314, 827, 1257, 1987, 2129
BstNI	CCWGG	3 cut(s)	86, 1529, 1940
BstNSI	RCATGY	5 cut(s)	834, 1149, 1835, 1928, 1990
BstPAI	GACNNNNGTC	1 cut(s)	2301
BstPI	GGTNACC	1 cut(s)	145
BstSCI	CCNGG	5 cut(s)	84, 1488, 1520, 1527, 1938
BstSFI	CTRYAG	2 cut(s)	591, 888
BstV1I	GCAGC	5 cut(s)	905, 1221, 1440, 1701, 1872
BstV2I	GAAGAC	1 cut(s)	153
BstX2I	RGATCY	5 cut(s)	456, 587, 838, 1062, 2104
BstXI	CCANNNNNNTGG	2 cut(s)	526, 1709
BstYI	RGATCY	5 cut(s)	456, 587, 838, 1062, 2104
Bsu15I	ATCGAT	2 cut(s)	200, 264
BsuI	GTATCC	1 cut(s)	2074
BsuRI	GGCC	4 cut(s)	89, 1488, 1909, 2069
BsuTUI	ATCGAT	2 cut(s)	200, 264
BtgI	CCRYGG	1 cut(s)	1735
BtrI	CACGTC	1 cut(s)	1435
BtsCI	GGATG	9 cut(s)	535, 564, 874, 977, 1228, 1798, 1870, 2170, 2191
BtsI	GCAGTG	3 cut(s)	409, 600, 963
BtsIMutI	CAGTG	5 cut(s)	409, 600, 963, 1135, 2243
BveI	ACCTGC	1 cut(s)	1632
Cac8I	GCNNGC	6 cut(s)	657, 832, 1147, 1207, 1732, 1926
CciI	TCATGA	1 cut(s)	1591
CfoI	GCGC	1 cut(s)	379
Cfr10I	RCCGGY	3 cut(s)	379, 1205, 1285
Cfr13I	GGNCC	3 cut(s)	208, 1486, 2347
ClaI	ATCGAT	2 cut(s)	200, 264
CsiI	ACCWGGT	1 cut(s)	1527
Csp6I	GTAC	6 cut(s)	366, 799, 1510, 1744, 1984, 2031
CspCI	CAANNNNNGTGG	2 cut(s)	886, 921
CviQI	GTAC	6 cut(s)	366, 799, 1510, 1744, 1984, 2031
DdeI	CTNAG	7 cut(s)	1066, 1920, 2034, 2148, 2235, 2328, 2382
DpnI	GATC	8 cut(s)	458, 589, 840, 948, 1064, 1106, 2106, 2222
DpnII	GATC	8 cut(s)	456, 587, 838, 946, 1062, 1104, 2104, 2220
DrdI	GACNNNNNNGTC	1 cut(s)	2199
DseDI	GACNNNNNNGTC	1 cut(s)	2199
EaeI	YGGCCR	1 cut(s)	1907
Eam1104I	CTCTTC	2 cut(s)	666, 1682
EarI	CTCTTC	2 cut(s)	666, 1682
Eco147I	AGGCCT	1 cut(s)	89
Eco24I	GRGCYC	1 cut(s)	1578
Eco32I	GATATC	1 cut(s)	1636
Eco47I	GGWCC	2 cut(s)	208, 2347
Eco57I	CTGAAG	3 cut(s)	494, 506, 1994
Eco88I	CYCGRG	2 cut(s)	1189, 1405
Eco91I	GGTNACC	1 cut(s)	145
EcoNI	CCTNNNNNAGG	1 cut(s)	1343
EcoO109I	RGGNCCY	1 cut(s)	208
EcoO65I	GGTNACC	1 cut(s)	145
EcoRII	CCWGG	3 cut(s)	84, 1527, 1938
EcoRV	GATATC	1 cut(s)	1636
EcoT22I	ATGCAT	3 cut(s)	571, 1151, 1992
EcoT38I	GRGCYC	1 cut(s)	1578
Esp3I	CGTCTC	2 cut(s)	317, 796
FalI	AAGNNNNNCTT	4 cut(s)	423, 455, 769, 801
FaqI	GGGAC	4 cut(s)	194, 1632, 1842, 2333
FauI	CCCGC	2 cut(s)	198, 2288
FauNDI	CATATG	2 cut(s)	1324, 1879
FbaI	TGATCA	1 cut(s)	1104
Fnu4HI	GCNGC	5 cut(s)	894, 1210, 1429, 1715, 1886
FokI	GGATG	9 cut(s)	542, 571, 881, 984, 1235, 1805, 1877, 2177, 2198
FriOI	GRGCYC	1 cut(s)	1578
Fsp4HI	GCNGC	5 cut(s)	894, 1210, 1429, 1715, 1886
FspBI	CTAG	1 cut(s)	32
GlaI	GCGC	1 cut(s)	378
GluI	GCNGC	5 cut(s)	894, 1210, 1429, 1715, 1886
GsaI	CCCAGC	2 cut(s)	293, 1938
GsuI	CTGGAG	1 cut(s)	1636
HaeIII	GGCC	4 cut(s)	89, 1488, 1909, 2069
HapII	CCGG	8 cut(s)	380, 1206, 1286, 1489, 1513, 1522, 1613, 1906
HhaI	GCGC	1 cut(s)	379
Hin6I	GCGC	1 cut(s)	377
HinP1I	GCGC	1 cut(s)	377
HincII	GTYRAC	1 cut(s)	2265
HindII	GTYRAC	1 cut(s)	2265
HindIII	AAGCTT	1 cut(s)	476
HpaII	CCGG	8 cut(s)	380, 1206, 1286, 1489, 1513, 1522, 1613, 1906
HphI	GGTGA	6 cut(s)	157, 305, 601, 1369, 1883, 2049
Hpy166II	GTNNAC	5 cut(s)	934, 1330, 1369, 1549, 2265
Hpy188III	TCNNGA	8 cut(s)	43, 122, 1413, 1592, 1613, 1653, 1697, 2162
Hpy8I	GTNNAC	5 cut(s)	934, 1330, 1369, 1549, 2265
Hpy99I	CGWCG	3 cut(s)	1436, 1508, 1586
HpyAV	CCTTC	8 cut(s)	392, 416, 458, 481, 795, 2080, 2162, 2354
HpyCH4III	ACNGT	6 cut(s)	494, 931, 1130, 1300, 1312, 1765
HpyCH4IV	ACGT	2 cut(s)	1434, 2110
HpyF10VI	GCNNNNNNNGC	5 cut(s)	314, 827, 1257, 1987, 2129
HpyF3I	CTNAG	7 cut(s)	1066, 1920, 2034, 2148, 2235, 2328, 2382
HpySE526I	ACGT	2 cut(s)	1434, 2110
HspAI	GCGC	1 cut(s)	377
KflI	GGGWCCC	1 cut(s)	208
Kpn2I	TCCGGA	1 cut(s)	1612
KroI	GCCGGC	1 cut(s)	1205
KroNI	GCCGGC	1 cut(s)	1207
Ksp22I	TGATCA	1 cut(s)	1104
Kzo9I	GATC	8 cut(s)	456, 587, 838, 946, 1062, 1104, 2104, 2220
LguI	GCTCTTC	1 cut(s)	666
LmnI	GCTCC	5 cut(s)	536, 1082, 1248, 1821, 1837
Lsp1109I	GCAGC	5 cut(s)	905, 1221, 1440, 1701, 1872
LweI	GCATC	7 cut(s)	192, 898, 1158, 1178, 1999, 2110, 2176
MabI	ACCWGGT	1 cut(s)	1527
MaeI	CTAG	1 cut(s)	32
MaeII	ACGT	2 cut(s)	1434, 2110
MaeIII	GTNAC	3 cut(s)	145, 1435, 2055
MalI	GATC	8 cut(s)	458, 589, 840, 948, 1064, 1106, 2106, 2222
MboI	GATC	8 cut(s)	456, 587, 838, 946, 1062, 1104, 2104, 2220
MboII	GAAGA	9 cut(s)	153, 587, 653, 729, 789, 1035, 1256, 1669, 1987
MflI	RGATCY	5 cut(s)	456, 587, 838, 1062, 2104
MhlI	GDGCHC	1 cut(s)	1578
MlyI	GAGTC	1 cut(s)	1912
MmeI	TCCRAC	2 cut(s)	74, 1784
Mph1103I	ATGCAT	3 cut(s)	571, 1151, 1992
MroI	TCCGGA	1 cut(s)	1612
MroNI	GCCGGC	1 cut(s)	1205
MroXI	GAANNNNTTC	1 cut(s)	784
MslI	CAYNNNNRTG	4 cut(s)	1217, 1243, 1707, 2214
MspCI	CTTAAG	1 cut(s)	131
MspI	CCGG	8 cut(s)	380, 1206, 1286, 1489, 1513, 1522, 1613, 1906
MspR9I	CCNGG	5 cut(s)	86, 1490, 1522, 1529, 1940
Mva1269I	GAATGC	1 cut(s)	706
MvaI	CCWGG	3 cut(s)	86, 1529, 1940
MwoI	GCNNNNNNNGC	5 cut(s)	314, 827, 1257, 1987, 2129
NaeI	GCCGGC	1 cut(s)	1207
NciI	CCSGG	2 cut(s)	1490, 1522
NdeI	CATATG	2 cut(s)	1324, 1879
NdeII	GATC	8 cut(s)	456, 587, 838, 946, 1062, 1104, 2104, 2220
NgoMIV	GCCGGC	1 cut(s)	1205
NmuCI	GTSAC	3 cut(s)	145, 1435, 2055
NsiI	ATGCAT	3 cut(s)	571, 1151, 1992
NspI	RCATGY	5 cut(s)	834, 1149, 1835, 1928, 1990
OliI	CACNNNNGTG	1 cut(s)	1707
PaeI	GCATGC	3 cut(s)	834, 1149, 1928
PagI	TCATGA	1 cut(s)	1591
PaqCI	CACCTGC	1 cut(s)	1632
PceI	AGGCCT	1 cut(s)	89
PciI	ACATGT	1 cut(s)	1831
PciSI	GCTCTTC	1 cut(s)	666
PcsI	WCGNNNNNNNCGW	2 cut(s)	1440, 1503
PctI	GAATGC	1 cut(s)	706
PdiI	GCCGGC	1 cut(s)	1207
PdmI	GAANNNNTTC	1 cut(s)	784
PkrI	GCNGC	5 cut(s)	895, 1211, 1430, 1716, 1887
PleI	GAGTC	1 cut(s)	1912
PpsI	GAGTC	1 cut(s)	1912
Ppu21I	YACGTR	1 cut(s)	2111
PpuMI	RGGWCCY	1 cut(s)	208
PscI	ACATGT	1 cut(s)	1831
PshAI	GACNNNNGTC	1 cut(s)	2301
PshBI	ATTAAT	2 cut(s)	564, 756
Psp5II	RGGWCCY	1 cut(s)	208
Psp6I	CCWGG	3 cut(s)	84, 1527, 1938
PspEI	GGTNACC	1 cut(s)	145
PspFI	CCCAGC	2 cut(s)	289, 1934
PspGI	CCWGG	3 cut(s)	84, 1527, 1938
PspPI	GGNCC	3 cut(s)	208, 1486, 2347
PspPPI	RGGWCCY	1 cut(s)	208
PstI	CTGCAG	1 cut(s)	595
PsuI	RGATCY	5 cut(s)	456, 587, 838, 1062, 2104
RsaI	GTAC	6 cut(s)	367, 800, 1511, 1745, 1985, 2032
RsaNI	GTAC	6 cut(s)	366, 799, 1510, 1744, 1984, 2031
RseI	CAYNNNNRTG	4 cut(s)	1217, 1243, 1707, 2214
SapI	GCTCTTC	1 cut(s)	666
SatI	GCNGC	5 cut(s)	894, 1210, 1429, 1715, 1886
Sau3AI	GATC	8 cut(s)	456, 587, 838, 946, 1062, 1104, 2104, 2220
Sau96I	GGNCC	3 cut(s)	208, 1486, 2347
ScaI	AGTACT	1 cut(s)	367
SchI	GAGTC	1 cut(s)	1912
ScrFI	CCNGG	5 cut(s)	86, 1490, 1522, 1529, 1940
SduI	GDGCHC	1 cut(s)	1578
SexAI	ACCWGGT	1 cut(s)	1527
SfaNI	GCATC	7 cut(s)	192, 898, 1158, 1178, 1999, 2110, 2176
SfcI	CTRYAG	2 cut(s)	591, 888
SinI	GGWCC	2 cut(s)	208, 2347
SmiMI	CAYNNNNRTG	4 cut(s)	1217, 1243, 1707, 2214
SmlI	CTYRAG	2 cut(s)	131, 2125
SmoI	CTYRAG	2 cut(s)	131, 2125
SphI	GCATGC	3 cut(s)	834, 1149, 1928
SseBI	AGGCCT	1 cut(s)	89
SsiI	CCGC	5 cut(s)	8, 185, 205, 1888, 2281
SspI	AATATT	3 cut(s)	1033, 1078, 1255
SspMI	CTAG	1 cut(s)	32
StuI	AGGCCT	1 cut(s)	89
StyD4I	CCNGG	5 cut(s)	84, 1488, 1520, 1527, 1938
TaaI	ACNGT	6 cut(s)	494, 931, 1130, 1300, 1312, 1765
TaiI	ACGT	2 cut(s)	1437, 2113
TaqI	TCGA	6 cut(s)	72, 200, 264, 642, 1497, 1632
TaqII	GACCGA	1 cut(s)	164
TatI	WGTACW	3 cut(s)	365, 1743, 1983
TscAI	CASTG	5 cut(s)	409, 600, 970, 1135, 2243
TseFI	GTSAC	3 cut(s)	145, 1435, 2055
TseI	GCWGC	5 cut(s)	893, 1209, 1428, 1714, 1885
Tsp45I	GTSAC	3 cut(s)	145, 1435, 2055
TspDTI	ATGAA	8 cut(s)	359, 411, 970, 1037, 1229, 1652, 1669, 2181
TspGWI	ACGGA	3 cut(s)	778, 1386, 1570
TspRI	CASTG	5 cut(s)	409, 600, 970, 1135, 2243
Vha464I	CTTAAG	1 cut(s)	131
VpaK11BI	GGWCC	2 cut(s)	208, 2347
VspI	ATTAAT	2 cut(s)	564, 756
XagI	CCTNNNNNAGG	1 cut(s)	1343
XapI	RAATTY	3 cut(s)	601, 914, 1669
XceI	RCATGY	5 cut(s)	834, 1149, 1835, 1928, 1990
XmnI	GAANNNNTTC	1 cut(s)	784
XspI	CTAG	1 cut(s)	32
ZrmI	AGTACT	1 cut(s)	367
Zsp2I	ATGCAT	3 cut(s)	571, 1151, 1992

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.