Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000499.1

Orthogroup ID

OG0006842

Physical Location & Seq

Genomic Coordinates Reverse (-)

18021 .. 20006

Gene Structure 1986 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1986 bp

atgaacaccatactgtttctcctcataatgcctcttcgctcaatccaactgtatttagacactagttctttgctttccagtaaccagacagcagatgatgatgatgatgatgatgatgatgaaatgaaaagaatcatgttaatactcgcgaaacgtccttggattcttggttgtcagaatgggtgtaatgtctatcggaatcagttcaatgtagtacagattttgaactatttgtttgaggagagtttggatgctaatcttgctttatactttttcaagtggtcagaatgttgcgccgcatcaaagcatacggtttggactgtatgtcgaatggtacatattttggtttctgggaacttgaatcacagagcagtggacctgctactgcgtcttgtgagaaatcatgctgaagaggagacaagtagtttgttactagaagttctttatggaacccacagtgaaagaagggttttagaaactgtgtgtagcatgctagttgatcagtatattaaggaaggcatggtgaacctggctttgaatgtaacatatgaaatgaagcaccaaaacatttttccttctggtggagtttgcaacactctgctacgagcattattggaatcaaaccagttggacgttgcatgggatttcttggaagttctgcggacaagaggactgggtttgaattcttctatcataagtctcttcattcataagtactgtagtgagggtgatctgggaagtggtttcaagttgcttgttgaaatgaagaagtatgggattcaacctgatgttgtttcatatacaattgttattcattccctttgcaagatgtcttatttgaaagaagccactacgttattgttgaagatgactcagttgggtatctctcctgattcggtcttgattagttcagttattgatggccactgccagttgagacaaacagcggcagcaattaagatactgaagatcttccgtcctcccctcaatatttttttgtacaatagctttacttcaaagctatgtacagatggcaacatgtttgaagcttctgaactttttcttgagatgtctgagtttggcttacttccagattgtgtttgttactcaaccataatagggggctactgcaaagtgaaagacatgaatagagcttttctgtattttggaaaaatgttaaaaagtggaattacaccatctgctaccacatacacgttgctcatcgatgcttactgcaagtctggagatacagaaatggccgaatatatgtttcaagcaatgctttcagacggtctactacctgatattgtgacttacaacactttaatggatggcttcggaaggaagggacacttacaaaaggtttttggggtcttagatatgatgaattcttctaatgtttcccccgatgttgttacatataacactctcattcatagtcttgccacaagaggatttgccaatgaggcaaaacaaatcatgtttgaacttatcaaaaggggtttctccctggatgtagcagcattcactaatgttatagacgggttttcaaagaaggggaactttgaggaagtcttttttgtgtggttctgcatgagtgagcatgaggtcaaacccgatgtagtgacatgcagtgcccttctcaatggatactgtaagaaacgtcaaatggaacaagccaatgtattatttcgcaagatgcttgatattggattacatccagacctgatactgtataacactttgattcgtggattttgtagtgttggaagcattgatgatgcttgcaacttgatatgtttgatggttgaaaatggtatccttcccaataacattactcaccgggcacttgtccttgggttcggaaaaaaaagggttaggaatcctgttttagtggcagctcttaaattgcaagaaattcttctcagatatggtattcatgctgattttgatgaatatttaataccagaaagctgcaccaattga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

661

Amino Acids

74.55

Weight (kDa)

5.73

Isoelectric Point (pI)

33.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_24	PF23276	195 - 323	5.1e-07	Fungal tetratrico peptide repeats
PPR_2	PF13041	235 - 276	5.5e-12	PPR repeat family
PPR_1	PF12854	259 - 290	6.9e-08	PPR repeat
PPR_2	PF13041	262 - 311	1.5e-09	PPR repeat family
PPR_2	PF13041	330 - 378	1.2e-08	PPR repeat family
PPR_3	PF13812	353 - 412	2.3e-07	Pentatricopeptide repeat domain
PPR_1	PF12854	361 - 392	2.6e-07	PPR repeat
PPR_2	PF13041	364 - 413	1.2e-14	PPR repeat family
PPR_long	PF17177	380 - 494	1.9e-10	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	391 - 447	8.9e-10	Pentatricopeptide repeat domain
PPR_1	PF12854	396 - 427	1.5e-06	PPR repeat
PPR_2	PF13041	403 - 447	6.7e-13	PPR repeat family
PPR	PF01535	403 - 432	1.2e-07	PPR repeat
TPR_24	PF23276	413 - 525	1.5e-07	Fungal tetratrico peptide repeats
PPR_3	PF13812	424 - 479	2.2e-09	Pentatricopeptide repeat domain
PPR_1	PF12854	430 - 462	1.1e-07	PPR repeat
PPR_2	PF13041	434 - 482	4.2e-16	PPR repeat family
PPR	PF01535	437 - 466	7.8e-06	PPR repeat
PPR_1	PF12854	466 - 493	4.4e-06	PPR repeat
PPR_2	PF13041	469 - 518	1e-08	PPR repeat family
PPR_2	PF13041	505 - 553	4.4e-10	PPR repeat family
PPR_1	PF12854	536 - 567	9.9e-07	PPR repeat
PPR_2	PF13041	539 - 575	4e-09	PPR repeat family
PPR_3	PF13812	563 - 622	8.7e-06	Pentatricopeptide repeat domain
PPR_1	PF12854	571 - 602	5.3e-09	PPR repeat
PPR_2	PF13041	574 - 622	1.4e-10	PPR repeat family
PPR	PF01535	578 - 607	9.3e-06	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0006842)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G19280 AT2G19280 AT2G19280 AT2G19280
fragaria_vesca	FvH4_7g04580
prunus_persica	Prupe.2G051600_v2.0.a1 Prupe.2G051600_v2.0.a1 Prupe.2G051600_v2.0.a1 Prupe.2G051600_v2.0.a1 Prupe.2G051600_v2.0.a1 Prupe.2G051600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0330001
rosa_laevigata	RLG00000029844
rosa_multiflora	Rmu_sc0000499.1_g000004 Rmu_sc0009365.1_g000009 Rmu_sc0009365.1_g000021 Rmu_sc0031998.1_g000001
rosa_roxburghii	Rroxscaffold_4G00320440
rosa_rugosa	Rorug01G0085200 Rorug01G0085300
rosa_samantha	Rh1AG103500 Rh1BG081900 Rh1CG098500 Rh1DG105900
rosa_wichuraiana	Rw1G008230 Rw1G008280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	387
AccI	GTMKAC	1 cut(s)	1294
AccII	CGCG	1 cut(s)	149
AciI	CCGC	3 cut(s)	297, 661, 947
AcoI	YGGCCR	2 cut(s)	922, 1257
AcsI	RAATTY	3 cut(s)	682, 1387, 1917
AcuI	CTGAAG	2 cut(s)	429, 986
AfaI	GTAC	5 cut(s)	216, 336, 716, 1001, 1027
AfiI	CCNNNNNNNGG	2 cut(s)	581, 1119
AflIII	ACRYGT	2 cut(s)	1038, 1212
AhdI	GACNNNNNGTC	1 cut(s)	324
AhlI	ACTAGT	1 cut(s)	62
AjnI	CCWGG	2 cut(s)	528, 1509
AjuI	GAANNNNNNNTTGG	2 cut(s)	555, 587
AluBI	AGCT	6 cut(s)	1008, 1021, 1049, 1154, 1901, 1974
AluI	AGCT	6 cut(s)	1008, 1021, 1049, 1154, 1901, 1974
Alw26I	GTCTC	3 cut(s)	410, 704, 931
AoxI	GGCC	2 cut(s)	922, 1257
ApeKI	GCWGC	4 cut(s)	950, 1520, 1898, 1974
ApoI	RAATTY	3 cut(s)	682, 1387, 1917
ArsI	GACNNNNNNTTYG	2 cut(s)	409, 441
Asp700I	GAANNNNTTC	4 cut(s)	203, 971, 1059, 1920
AspLEI	GCGC	1 cut(s)	296
AspS9I	GGNCC	1 cut(s)	376
AsuC2I	CCSGG	1 cut(s)	1844
AsuHPI	GGTGA	3 cut(s)	535, 740, 1832
AvaII	GGWCC	1 cut(s)	376
BaeGI	GKGCMC	2 cut(s)	1639, 1849
BalI	TGGCCA	1 cut(s)	924
BbvI	GCAGC	4 cut(s)	962, 1532, 1910, 1961
BccI	CCATC	5 cut(s)	914, 1025, 1204, 1325, 1798
BciT130I	CCWGG	2 cut(s)	530, 1511
BciVI	GTATCC	2 cut(s)	1643, 1829
BclI	TGATCA	1 cut(s)	499
BcnI	CCSGG	1 cut(s)	1844
BcoDI	GTCTC	3 cut(s)	410, 704, 931
BcuI	ACTAGT	1 cut(s)	62
BfaI	CTAG	3 cut(s)	63, 434, 494
BfmI	CTRYAG	1 cut(s)	718
BfuAI	ACCTGC	1 cut(s)	387
BfuI	GTATCC	2 cut(s)	1643, 1829
BglI	GCCNNNNNGGC	1 cut(s)	1466
BglII	AGATCT	1 cut(s)	969
BisI	GCNGC	6 cut(s)	297, 948, 951, 1521, 1899, 1975
BlsI	GCNGC	6 cut(s)	298, 949, 952, 1522, 1900, 1976
BmcAI	AGTACT	1 cut(s)	716
Bme1390I	CCNGG	3 cut(s)	530, 1511, 1844
Bme18I	GGWCC	1 cut(s)	376
BmeRI	GACNNNNNGTC	1 cut(s)	324
BmgT120I	GGNCC	1 cut(s)	376
BmiI	GGNNCC	1 cut(s)	451
BmrFI	CCNGG	3 cut(s)	530, 1511, 1844
BmrI	ACTGGG	1 cut(s)	683
BmsI	GCATC	5 cut(s)	241, 308, 1216, 1689, 1771
BmuI	ACTGGG	1 cut(s)	683
BpmI	CTGGAG	1 cut(s)	1263
BpuEI	CTTGAG	1 cut(s)	1085
BpuMI	CCSGG	1 cut(s)	1844
Bsa29I	ATCGAT	1 cut(s)	1224
BsaBI	GATNNNNATC	1 cut(s)	255
BsaJI	CCNNGG	3 cut(s)	158, 1509, 1855
BsaXI	ACNNNNNCTCC	1 cut(s)	33
Bsc4I	CCNNNNNNNGG	2 cut(s)	581, 1119
Bse1I	ACTGG	4 cut(s)	78, 625, 678, 931
Bse3DI	GCAATG	1 cut(s)	1284
Bse8I	GATNNNNATC	1 cut(s)	255
BseBI	CCWGG	2 cut(s)	530, 1511
BseCI	ATCGAT	1 cut(s)	1224
BseDI	CCNNGG	3 cut(s)	158, 1509, 1855
BseGI	GGATG	4 cut(s)	256, 1336, 1519, 1717
BseJI	GATNNNNATC	1 cut(s)	255
BseLI	CCNNNNNNNGG	2 cut(s)	581, 1119
BseMI	GCAATG	1 cut(s)	1284
BseMII	CTCAG	3 cut(s)	887, 1065, 1939
BseNI	ACTGG	4 cut(s)	78, 625, 678, 931
BseRI	GAGGAG	3 cut(s)	11, 254, 428
BseSI	GKGCMC	2 cut(s)	1639, 1849
BseXI	GCAGC	4 cut(s)	962, 1532, 1910, 1961
BsgI	GTGCAG	1 cut(s)	1960
Bsh1236I	CGCG	1 cut(s)	149
BshFI	GGCC	2 cut(s)	924, 1259
BshVI	ATCGAT	1 cut(s)	1224
BsiSI	CCGG	1 cut(s)	1843
BslFI	GGGAC	1 cut(s)	1362
BslI	CCNNNNNNNGG	2 cut(s)	581, 1119
BsmAI	GTCTC	3 cut(s)	410, 704, 931
BsmFI	GGGAC	1 cut(s)	1362
BsmI	GAATGC	1 cut(s)	1523
BsnI	GGCC	2 cut(s)	924, 1259
Bsp1286I	GDGCHC	2 cut(s)	1639, 1849
Bsp1407I	TGTACA	2 cut(s)	999, 1025
Bsp143I	GATC	3 cut(s)	499, 730, 969
Bsp68I	TCGCGA	1 cut(s)	149
BspACI	CCGC	3 cut(s)	297, 661, 947
BspANI	GGCC	2 cut(s)	924, 1259
BspCNI	CTCAG	3 cut(s)	886, 1066, 1938
BspDI	ATCGAT	1 cut(s)	1224
BspFNI	CGCG	1 cut(s)	149
BspLI	GGNNCC	1 cut(s)	451
BspMI	ACCTGC	1 cut(s)	387
BsrDI	GCAATG	1 cut(s)	1284
BsrGI	TGTACA	2 cut(s)	999, 1025
BsrI	ACTGG	4 cut(s)	78, 625, 678, 931
BssECI	CCNNGG	3 cut(s)	158, 1509, 1855
BssMI	GATC	3 cut(s)	499, 730, 969
BssT1I	CCWWGG	2 cut(s)	158, 1855
Bst2UI	CCWGG	2 cut(s)	530, 1511
Bst6I	CTCTTC	3 cut(s)	39, 405, 707
BstAUI	TGTACA	2 cut(s)	999, 1025
BstC8I	GCNNGC	2 cut(s)	491, 1786
BstDEI	CTNAG	4 cut(s)	873, 1074, 1375, 1925
BstF5I	GGATG	4 cut(s)	256, 1336, 1519, 1717
BstFNI	CGCG	1 cut(s)	149
BstHHI	GCGC	1 cut(s)	296
BstKTI	GATC	3 cut(s)	502, 733, 972
BstMAI	GTCTC	3 cut(s)	410, 704, 931
BstMBI	GATC	3 cut(s)	499, 730, 969
BstMWI	GCNNNNNNNGC	2 cut(s)	260, 1466
BstNI	CCWGG	2 cut(s)	530, 1511
BstNSI	RCATGY	3 cut(s)	493, 1042, 1632
BstSCI	CCNGG	3 cut(s)	528, 1509, 1842
BstSFI	CTRYAG	1 cut(s)	718
BstSLI	GKGCMC	2 cut(s)	1639, 1849
BstUI	CGCG	1 cut(s)	149
BstV1I	GCAGC	4 cut(s)	962, 1532, 1910, 1961
BstX2I	RGATCY	1 cut(s)	969
BstYI	RGATCY	1 cut(s)	969
Bsu15I	ATCGAT	1 cut(s)	1224
BsuI	GTATCC	2 cut(s)	1643, 1829
BsuRI	GGCC	2 cut(s)	924, 1259
BsuTUI	ATCGAT	1 cut(s)	1224
BtsCI	GGATG	4 cut(s)	256, 1336, 1519, 1717
BtsI	GCAGTG	3 cut(s)	378, 925, 1639
BtsIMutI	CAGTG	4 cut(s)	378, 463, 925, 1639
BtuMI	TCGCGA	1 cut(s)	149
BveI	ACCTGC	1 cut(s)	387
Cac8I	GCNNGC	2 cut(s)	491, 1786
CfoI	GCGC	1 cut(s)	296
Cfr13I	GGNCC	1 cut(s)	376
ClaI	ATCGAT	1 cut(s)	1224
CseI	GACGC	1 cut(s)	377
Csp6I	GTAC	5 cut(s)	215, 335, 715, 1000, 1026
CviQI	GTAC	5 cut(s)	215, 335, 715, 1000, 1026
DdeI	CTNAG	4 cut(s)	873, 1074, 1375, 1925
DpnI	GATC	3 cut(s)	501, 732, 971
DpnII	GATC	3 cut(s)	499, 730, 969
DriI	GACNNNNNGTC	1 cut(s)	324
EaeI	YGGCCR	2 cut(s)	922, 1257
Eam1104I	CTCTTC	3 cut(s)	39, 405, 707
Eam1105I	GACNNNNNGTC	1 cut(s)	324
EarI	CTCTTC	3 cut(s)	39, 405, 707
Eco130I	CCWWGG	2 cut(s)	158, 1855
Eco47I	GGWCC	1 cut(s)	376
Eco57I	CTGAAG	2 cut(s)	429, 986
EcoRI	GAATTC	2 cut(s)	682, 1387
EcoRII	CCWGG	2 cut(s)	528, 1509
EcoT14I	CCWWGG	2 cut(s)	158, 1855
ErhI	CCWWGG	2 cut(s)	158, 1855
FalI	AAGNNNNNCTT	8 cut(s)	1266, 1298, 1337, 1369, 1547, 1579, 1905, 1937
FaqI	GGGAC	1 cut(s)	1362
FauNDI	CATATG	1 cut(s)	547
FbaI	TGATCA	1 cut(s)	499
FblI	GTMKAC	1 cut(s)	1294
Fnu4HI	GCNGC	6 cut(s)	297, 948, 951, 1521, 1899, 1975
FokI	GGATG	4 cut(s)	263, 1343, 1526, 1704
Fsp4HI	GCNGC	6 cut(s)	297, 948, 951, 1521, 1899, 1975
FspBI	CTAG	3 cut(s)	63, 434, 494
GlaI	GCGC	1 cut(s)	295
GluI	GCNGC	6 cut(s)	297, 948, 951, 1521, 1899, 1975
GsuI	CTGGAG	1 cut(s)	1263
HaeIII	GGCC	2 cut(s)	924, 1259
HapII	CCGG	1 cut(s)	1843
HgaI	GACGC	1 cut(s)	377
HhaI	GCGC	1 cut(s)	296
Hin6I	GCGC	1 cut(s)	294
HinP1I	GCGC	1 cut(s)	294
HindIII	AAGCTT	1 cut(s)	1047
HpaII	CCGG	1 cut(s)	1843
HphI	GGTGA	3 cut(s)	535, 740, 1832
Hpy166II	GTNNAC	3 cut(s)	376, 526, 1295
Hpy188I	TCNGA	9 cut(s)	177, 198, 286, 1054, 1075, 1288, 1340, 1865, 1928
Hpy188III	TCNNGA	7 cut(s)	148, 890, 901, 1064, 1091, 1242, 1721
Hpy8I	GTNNAC	3 cut(s)	376, 526, 1295
HpyAV	CCTTC	8 cut(s)	459, 509, 585, 1335, 1339, 1549, 1649, 1832
HpyCH4IV	ACGT	5 cut(s)	154, 633, 854, 1214, 1663
HpyF10VI	GCNNNNNNNGC	2 cut(s)	260, 1466
HpyF3I	CTNAG	4 cut(s)	873, 1074, 1375, 1925
HpySE526I	ACGT	5 cut(s)	154, 633, 854, 1214, 1663
HspAI	GCGC	1 cut(s)	294
Ksp22I	TGATCA	1 cut(s)	499
Kzo9I	GATC	3 cut(s)	499, 730, 969
Lsp1109I	GCAGC	4 cut(s)	962, 1532, 1910, 1961
LweI	GCATC	5 cut(s)	241, 308, 1216, 1689, 1771
MaeI	CTAG	3 cut(s)	63, 434, 494
MaeII	ACGT	5 cut(s)	154, 633, 854, 1214, 1663
MaeIII	GTNAC	7 cut(s)	80, 429, 541, 1103, 1309, 1414, 1624
MalI	GATC	3 cut(s)	501, 732, 971
MboI	GATC	3 cut(s)	499, 730, 969
MfeI	CAATTG	2 cut(s)	804, 1981
MflI	RGATCY	1 cut(s)	969
MhlI	GDGCHC	2 cut(s)	1639, 1849
MlsI	TGGCCA	1 cut(s)	924
MluCI	AATT	8 cut(s)	682, 804, 954, 1188, 1387, 1907, 1917, 1981
MluNI	TGGCCA	1 cut(s)	924
MlyI	GAGTC	1 cut(s)	865
MmeI	TCCRAC	3 cut(s)	70, 609, 1747
Mox20I	TGGCCA	1 cut(s)	924
MroXI	GAANNNNTTC	4 cut(s)	203, 971, 1059, 1920
MscI	TGGCCA	1 cut(s)	924
MseI	TTAA	7 cut(s)	140, 510, 957, 1178, 1325, 1905, 1961
MslI	CAYNNNNRTG	1 cut(s)	1325
Msp20I	TGGCCA	1 cut(s)	924
MspA1I	CMGCKG	1 cut(s)	947
MspI	CCGG	1 cut(s)	1843
MspR9I	CCNGG	3 cut(s)	530, 1511, 1844
MunI	CAATTG	2 cut(s)	804, 1981
Mva1269I	GAATGC	1 cut(s)	1523
MvaI	CCWGG	2 cut(s)	530, 1511
MvnI	CGCG	1 cut(s)	149
MwoI	GCNNNNNNNGC	2 cut(s)	260, 1466
NciI	CCSGG	1 cut(s)	1844
NdeI	CATATG	1 cut(s)	547
NdeII	GATC	3 cut(s)	499, 730, 969
NlaIV	GGNNCC	1 cut(s)	451
NmuCI	GTSAC	2 cut(s)	1309, 1624
NruI	TCGCGA	1 cut(s)	149
NspI	RCATGY	3 cut(s)	493, 1042, 1632
PaeI	GCATGC	1 cut(s)	493
PciI	ACATGT	1 cut(s)	1038
PctI	GAATGC	1 cut(s)	1523
PdmI	GAANNNNTTC	4 cut(s)	203, 971, 1059, 1920
PfeI	GAWTC	9 cut(s)	132, 163, 199, 361, 617, 778, 893, 1747, 1882
PkrI	GCNGC	6 cut(s)	298, 949, 952, 1522, 1900, 1976
PleI	GAGTC	1 cut(s)	865
PpsI	GAGTC	1 cut(s)	865
PscI	ACATGT	1 cut(s)	1038
Psp6I	CCWGG	2 cut(s)	528, 1509
PspGI	CCWGG	2 cut(s)	528, 1509
PspN4I	GGNNCC	1 cut(s)	451
PspPI	GGNCC	1 cut(s)	376
PsuI	RGATCY	1 cut(s)	969
RruI	TCGCGA	1 cut(s)	149
RsaI	GTAC	5 cut(s)	216, 336, 716, 1001, 1027
RsaNI	GTAC	5 cut(s)	215, 335, 715, 1000, 1026
RseI	CAYNNNNRTG	1 cut(s)	1325
SaqAI	TTAA	7 cut(s)	140, 510, 957, 1178, 1325, 1905, 1961
SatI	GCNGC	6 cut(s)	297, 948, 951, 1521, 1899, 1975
Sau3AI	GATC	3 cut(s)	499, 730, 969
Sau96I	GGNCC	1 cut(s)	376
ScaI	AGTACT	1 cut(s)	716
SchI	GAGTC	1 cut(s)	865
ScrFI	CCNGG	3 cut(s)	530, 1511, 1844
SduI	GDGCHC	2 cut(s)	1639, 1849
SfaNI	GCATC	5 cut(s)	241, 308, 1216, 1689, 1771
SfcI	CTRYAG	1 cut(s)	718
SinI	GGWCC	1 cut(s)	376
SmiMI	CAYNNNNRTG	1 cut(s)	1325
SmlI	CTYRAG	1 cut(s)	1064
SmoI	CTYRAG	1 cut(s)	1064
SpeI	ACTAGT	1 cut(s)	62
SphI	GCATGC	1 cut(s)	493
Sse9I	AATT	8 cut(s)	682, 804, 954, 1188, 1387, 1907, 1917, 1981
SsiI	CCGC	3 cut(s)	297, 661, 947
SspI	AATATT	2 cut(s)	991, 1958
SspMI	CTAG	3 cut(s)	63, 434, 494
StyD4I	CCNGG	3 cut(s)	528, 1509, 1842
StyI	CCWWGG	2 cut(s)	158, 1855
TaiI	ACGT	5 cut(s)	157, 636, 857, 1217, 1666
TaqI	TCGA	2 cut(s)	328, 1224
TaqII	GACCGA	1 cut(s)	886
TasI	AATT	8 cut(s)	682, 804, 954, 1188, 1387, 1907, 1917, 1981
TatI	WGTACW	4 cut(s)	214, 714, 999, 1025
TauI	GCSGC	2 cut(s)	299, 950
TfiI	GAWTC	9 cut(s)	132, 163, 199, 361, 617, 778, 893, 1747, 1882
Tru1I	TTAA	7 cut(s)	140, 510, 957, 1178, 1325, 1905, 1961
Tru9I	TTAA	7 cut(s)	140, 510, 957, 1178, 1325, 1905, 1961
TscAI	CASTG	4 cut(s)	378, 463, 932, 1639
TseFI	GTSAC	2 cut(s)	1309, 1624
TseI	GCWGC	4 cut(s)	950, 1520, 1898, 1974
Tsp45I	GTSAC	2 cut(s)	1309, 1624
TspGWI	ACGGA	1 cut(s)	965
TspRI	CASTG	4 cut(s)	378, 463, 932, 1639
VpaK11BI	GGWCC	1 cut(s)	376
XapI	RAATTY	3 cut(s)	682, 1387, 1917
XceI	RCATGY	3 cut(s)	493, 1042, 1632
XmiI	GTMKAC	1 cut(s)	1294
XmnI	GAANNNNTTC	4 cut(s)	203, 971, 1059, 1920
XspI	CTAG	3 cut(s)	63, 434, 494
ZrmI	AGTACT	1 cut(s)	716

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.