Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000600.1

Orthogroup ID

OG0005612

Physical Location & Seq

Genomic Coordinates Reverse (-)

8686 .. 22699

Gene Structure 14014 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1929 bp

atggggtctgaagatcatgcgtcacagatggttgcagatggcgaccttgatgttgatttcatgatcagacggagtctgaaatcatatgtcacaaatggtgacaggtcgcagatggtgatcaaggcaggaaataagtcaggaaaatcgtggctgaagctgaaggagcttgttggcagcagaacgggtaggaagcaatttttgttggctttgccaatatatgacttcagctatacaatggattccgacgccatattatcgtcgtcggaagatatgcacgacgccaacgacgttgaatccgacgaggaggagggcttctacagcgacgagaacgaagtcgcctccgactacaataccgacgacgacgacgtcgatgattacgtcatcgaggaagatgaagacggaatcaacatgatccaggctcgtcgccctgagaataattacatcgtcttgaaggagttagatataaaggaacgccaggaagatgatattacaagtgtatcttctgtgctgtccatatcaagagctgcttcaaccattttgcttcgctactataattggaatgttagtgaagtgcatgaagcatggtttgcagatgaagagaaagtccggaaaactgtaggcttgttacctgggacagttgttcagtttgcaaagtcaagagaactgatgtgtgggatctgttttgaagcctttccacgtagtaggctaaaatcagcagattgtggtcatcctttctgttttgaatgttgggaaggctacattagaacatccatcaacgatggtcctggatgtttgatgctgagatgtcctgatccatcttgtggtgccgctgttggtcaagatatgattaatatatttgcttgtgatgatgataggctcaagtactctgagtacctgcttaggtcttttgttgaagacaacaagaagaccaagtggtgtccagctccgggttgtgagcatgctgttaattatgttggagataatgaaaattatgatgtttcttgcctctgttcatacgacttctgctggaattgtacggaggaaacccatcgtcctgtggactgtaacactgtaaggttatggatcttgaagaacagtgctgagtctgaaaacatgaactggatattagccaattccaagccatgtccaaagtgcaagcgaccgattgaaaaaaaccaagggtgtatgcacatgacatgctcaccagcttgtaaatttgaattttgctggctatgcctcggtgcatggtcagaccatggtgagaggaccggcggtttctatgcttgtaatcgctatgaggcagctaagcaagagggagtttatgatgaggctgagagaagaagagaaatggcaaagaattctttggagagatacactcattattatgaacgttgggcaagcaatcaatcgtcaaggcagaaggctcttgttgatttacatcaaatgcaaactgtcaatatggagaagctgagtgagatacaatgtcaacctgagtctcagctgaagttcttatctgatgcctggcaacagattgttgaatgtaggagagtgctgaaatggacttatgcatatggatactacctaactgagcatgagaatgctaagaaacagttttttgagtacttgcaaggcgaggcagagtctgggctggaaaggcttcatcaatgtgcagagaaggagctactaccattcctcaatgccgatggcccatcacgagaattcattgaattccatacgaaactagcagggctgaccgcggtgactaaatcctactttgagaatctggtgagggcattggagaatcacctatcagatgtggactgtcaccaagctggcagtctggcaacaagctcaaaaaatggaaccagcaaaggaaaaggtggcagaggaaaggaaactagtcgagcgggtggctccagcagaaattaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0000209 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010604 GO:0016567 GO:0016740 GO:0019222 GO:0019538 GO:0019787 GO:0019899 GO:0030162 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031624 GO:0032268 GO:0032270 GO:0032434 GO:0032436 GO:0032446 GO:0032991 GO:0036211 GO:0042176 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044390 GO:0044424 GO:0044464 GO:0045732 GO:0045862 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0060255 GO:0061136 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1901800 GO:1902494 GO:1903050 GO:1903052 GO:1903362 GO:1903364 GO:1990234 GO:2000058 GO:2000060

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

IBR

Protein Analysis

642

Amino Acids

73.18

Weight (kDa)

5.03

Isoelectric Point (pI)

52.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UBA_ARI1	PF21235	158 - 196	1e-08	E3 ubiquitin-protein ligase ARIH1, UBA-like domain
IBR	PF01485	294 - 355	4.7e-15	IBR domain, a half RING-finger domain
IBR	PF01485	373 - 419	1.5e-07	IBR domain, a half RING-finger domain
IBR_1	PF22191	377 - 417	1.1e-14	IBR domain
IBR_2	PF22605	378 - 417	4.5e-13	IBR domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005612)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G05890 AT1G05890 AT2G31510 AT2G31510 AT2G31510
fragaria_vesca	FvH4_4g11130 FvH4_4g11130 FvH4_4g11130 FvH4_4g11130 FvH4_4g11130 FvH4_4g11130
malus_domestica	MD04G1007200.v1.1 MD13G1275700.v1.1
prunus_persica	Prupe.1G191400_v2.0.a1
pyrus_communis	pycom04g03420 pycom13g28570
rosa_chinensis	RchiOBHm_Chr4g0407061
rosa_laevigata	RLG00000008740
rosa_multiflora	Rmu_sc0000600.1_g000003
rosa_roxburghii	Rroxscaffold_5G00351790
rosa_rugosa	Rorug04G0077500 Rorug04G0077600 Rorug04G0077700
rosa_samantha	Rh4AG142400 Rh4BG140100 Rh4CG148900 Rh4DG136500
rosa_wichuraiana	Rw4G011600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	365
AatII	GACGTC	1 cut(s)	369
Acc36I	ACCTGC	1 cut(s)	903
AccB1I	GGYRCC	1 cut(s)	824
AccB7I	CCANNNNNTGG	1 cut(s)	821
AccBSI	CCGCTC	1 cut(s)	1907
AccII	CGCG	1 cut(s)	1757
AccIII	TCCGGA	1 cut(s)	606
AciI	CCGC	5 cut(s)	828, 1272, 1755, 1757, 1907
AclI	AACGTT	1 cut(s)	1390
AclWI	GGATC	4 cut(s)	406, 683, 806, 1091
AcsI	RAATTY	5 cut(s)	1214, 1220, 1357, 1718, 1727
AcuI	CTGAAG	5 cut(s)	30, 173, 179, 208, 1523
AcyI	GRCGYC	3 cut(s)	246, 279, 366
AfaI	GTAC	4 cut(s)	884, 893, 1036, 1622
AfiI	CCNNNNNNNGG	2 cut(s)	821, 947
AhlI	ACTAGT	1 cut(s)	1898
AjnI	CCWGG	5 cut(s)	414, 474, 628, 784, 1520
Alw26I	GTCTC	1 cut(s)	1500
AlwI	GGATC	4 cut(s)	406, 683, 806, 1091
AlwNI	CAGNNNCTG	1 cut(s)	1643
Aor13HI	TCCGGA	1 cut(s)	606
AoxI	GGCC	1 cut(s)	1705
ApeKI	GCWGC	3 cut(s)	174, 524, 1301
ApoI	RAATTY	5 cut(s)	1214, 1220, 1357, 1718, 1727
AseI	ATTAAT	1 cut(s)	849
Asp700I	GAANNNNTTC	2 cut(s)	690, 1656
AspS9I	GGNCC	3 cut(s)	782, 1266, 1706
AsuC2I	CCSGG	1 cut(s)	948
AsuHPI	GGTGA	8 cut(s)	110, 127, 1194, 1271, 1771, 1796, 1798, 1817
AvaII	GGWCC	2 cut(s)	782, 1266
BaeI	ACNNNNGTAYC	2 cut(s)	480, 513
BanI	GGYRCC	1 cut(s)	824
BauI	CACGAG	1 cut(s)	1713
BbsI	GAAGAC	3 cut(s)	402, 921, 932
BbvI	GCAGC	3 cut(s)	186, 511, 1313
BccI	CCATC	9 cut(s)	22, 32, 106, 773, 779, 823, 1056, 1697, 1717
BciT130I	CCWGG	5 cut(s)	416, 476, 630, 786, 1522
BciVI	GTATCC	1 cut(s)	1568
BclI	TGATCA	2 cut(s)	63, 117
BcnI	CCSGG	1 cut(s)	948
BcoDI	GTCTC	1 cut(s)	1500
BcuI	ACTAGT	1 cut(s)	1898
BfaI	CTAG	2 cut(s)	1742, 1899
BfmI	CTRYAG	2 cut(s)	316, 615
BfuAI	ACCTGC	1 cut(s)	903
BfuI	GTATCC	1 cut(s)	1568
BisI	GCNGC	4 cut(s)	175, 525, 828, 1302
BlpI	GCTNAGC	1 cut(s)	1305
BlsI	GCNGC	4 cut(s)	176, 526, 829, 1303
BmcAI	AGTACT	2 cut(s)	884, 1622
Bme1390I	CCNGG	6 cut(s)	416, 476, 630, 786, 948, 1522
Bme18I	GGWCC	2 cut(s)	782, 1266
BmgT120I	GGNCC	3 cut(s)	782, 1266, 1706
BmiI	GGNNCC	3 cut(s)	826, 1864, 1915
BmrFI	CCNGG	6 cut(s)	416, 476, 630, 786, 948, 1522
BmsI	GCATC	2 cut(s)	786, 1507
BpiI	GAAGAC	3 cut(s)	402, 921, 932
BplI	GAGNNNNNCTC	2 cut(s)	1360, 1392
BpmI	CTGGAG	1 cut(s)	1900
Bpu10I	CCTNAGC	1 cut(s)	899
Bpu1102I	GCTNAGC	1 cut(s)	1305
BpuEI	CTTGAG	1 cut(s)	863
BpuMI	CCSGG	1 cut(s)	948
BsaAI	YACGTR	1 cut(s)	698
BsaBI	GATNNNNATC	2 cut(s)	116, 1437
BsaHI	GRCGYC	3 cut(s)	246, 279, 366
BsaJI	CCNNGG	5 cut(s)	629, 1177, 1237, 1255, 1755
BsaWI	WCCGGW	1 cut(s)	606
Bsc4I	CCNNNNNNNGG	2 cut(s)	821, 947
Bse118I	RCCGGY	1 cut(s)	1268
Bse1I	ACTGG	1 cut(s)	1124
Bse8I	GATNNNNATC	2 cut(s)	116, 1437
BseAI	TCCGGA	1 cut(s)	606
BseBI	CCWGG	5 cut(s)	416, 476, 630, 786, 1522
BseDI	CCNNGG	5 cut(s)	629, 1177, 1237, 1255, 1755
BseGI	GGATG	3 cut(s)	727, 767, 794
BseJI	GATNNNNATC	2 cut(s)	116, 1437
BseLI	CCNNNNNNNGG	2 cut(s)	821, 947
BseMII	CTCAG	9 cut(s)	420, 791, 879, 1092, 1323, 1460, 1482, 1511, 1578
BseNI	ACTGG	1 cut(s)	1124
BseRI	GAGGAG	2 cut(s)	317, 320
BseXI	GCAGC	3 cut(s)	186, 511, 1313
BsgI	GTGCAG	1 cut(s)	1689
Bsh1236I	CGCG	1 cut(s)	1757
Bsh1285I	CGRYCG	1 cut(s)	1163
BshFI	GGCC	1 cut(s)	1707
BshNI	GGYRCC	1 cut(s)	824
BsiEI	CGRYCG	1 cut(s)	1163
BsiSI	CCGG	3 cut(s)	607, 947, 1269
BslFI	GGGAC	1 cut(s)	646
BslI	CCNNNNNNNGG	2 cut(s)	821, 947
BsmAI	GTCTC	1 cut(s)	1500
BsmFI	GGGAC	1 cut(s)	646
BsmI	GAATGC	1 cut(s)	1603
BsnI	GGCC	1 cut(s)	1707
Bsp13I	TCCGGA	1 cut(s)	606
Bsp143I	GATC	7 cut(s)	13, 63, 117, 411, 675, 811, 1083
Bsp1720I	GCTNAGC	1 cut(s)	1305
Bsp19I	CCATGG	1 cut(s)	1255
BspACI	CCGC	5 cut(s)	828, 1272, 1755, 1757, 1907
BspANI	GGCC	1 cut(s)	1707
BspCNI	CTCAG	9 cut(s)	421, 792, 880, 1093, 1324, 1461, 1483, 1510, 1579
BspEI	TCCGGA	1 cut(s)	606
BspFNI	CGCG	1 cut(s)	1757
BspHI	TCATGA	1 cut(s)	60
BspLI	GGNNCC	3 cut(s)	826, 1864, 1915
BspMI	ACCTGC	1 cut(s)	903
BspPI	GGATC	4 cut(s)	406, 683, 806, 1091
BspT107I	GGYRCC	1 cut(s)	824
BsrBI	CCGCTC	1 cut(s)	1907
BsrFI	RCCGGY	1 cut(s)	1268
BsrI	ACTGG	1 cut(s)	1124
BssAI	RCCGGY	1 cut(s)	1268
BssECI	CCNNGG	5 cut(s)	629, 1177, 1237, 1255, 1755
BssMI	GATC	7 cut(s)	13, 63, 117, 411, 675, 811, 1083
BssNI	GRCGYC	3 cut(s)	246, 279, 366
BssSI	CACGAG	1 cut(s)	1713
BssT1I	CCWWGG	2 cut(s)	1177, 1255
Bst2BI	CACGAG	1 cut(s)	1713
Bst2UI	CCWGG	5 cut(s)	416, 476, 630, 786, 1522
Bst4CI	ACNGT	8 cut(s)	616, 637, 1064, 1072, 1097, 1453, 1611, 1823
Bst6I	CTCTTC	2 cut(s)	591, 1336
BstACI	GRCGYC	3 cut(s)	246, 279, 366
BstAPI	GCANNNNNTGC	1 cut(s)	587
BstBAI	YACGTR	1 cut(s)	698
BstC8I	GCNNGC	5 cut(s)	960, 1157, 1229, 1399, 1834
BstDSI	CCRYGG	2 cut(s)	1255, 1755
BstF5I	GGATG	3 cut(s)	727, 767, 794
BstFNI	CGCG	1 cut(s)	1757
BstKTI	GATC	7 cut(s)	16, 66, 120, 414, 678, 814, 1086
BstMAI	GTCTC	1 cut(s)	1500
BstMBI	GATC	7 cut(s)	13, 63, 117, 411, 675, 811, 1083
BstMCI	CGRYCG	1 cut(s)	1163
BstMWI	GCNNNNNNNGC	5 cut(s)	163, 318, 587, 1233, 1654
BstNI	CCWGG	5 cut(s)	416, 476, 630, 786, 1522
BstNSI	RCATGY	2 cut(s)	962, 1200
BstSCI	CCNGG	6 cut(s)	414, 474, 628, 784, 946, 1520
BstSFI	CTRYAG	2 cut(s)	316, 615
BstUI	CGCG	1 cut(s)	1757
BstV1I	GCAGC	3 cut(s)	186, 511, 1313
BstV2I	GAAGAC	3 cut(s)	402, 921, 932
BstX2I	RGATCY	2 cut(s)	675, 1083
BstYI	RGATCY	2 cut(s)	675, 1083
BsuI	GTATCC	1 cut(s)	1568
BsuRI	GGCC	1 cut(s)	1707
BtgI	CCRYGG	2 cut(s)	1255, 1755
BtsCI	GGATG	3 cut(s)	727, 767, 794
BtsIMutI	CAGTG	2 cut(s)	1068, 1102
BveI	ACCTGC	1 cut(s)	903
Cac8I	GCNNGC	5 cut(s)	960, 1157, 1229, 1399, 1834
CaiI	CAGNNNCTG	1 cut(s)	1643
CciI	TCATGA	1 cut(s)	60
Cfr10I	RCCGGY	1 cut(s)	1268
Cfr13I	GGNCC	3 cut(s)	782, 1266, 1706
Cfr42I	CCGCGG	1 cut(s)	1758
CseI	GACGC	3 cut(s)	9, 254, 287
Csp6I	GTAC	4 cut(s)	883, 892, 1035, 1621
CviQI	GTAC	4 cut(s)	883, 892, 1035, 1621
DpnI	GATC	7 cut(s)	15, 65, 119, 413, 677, 813, 1085
DpnII	GATC	7 cut(s)	13, 63, 117, 411, 675, 811, 1083
DrdI	GACNNNNNNGTC	1 cut(s)	365
DseDI	GACNNNNNNGTC	1 cut(s)	365
Eam1104I	CTCTTC	2 cut(s)	591, 1336
EarI	CTCTTC	2 cut(s)	591, 1336
Eco130I	CCWWGG	2 cut(s)	1177, 1255
Eco47I	GGWCC	2 cut(s)	782, 1266
Eco57I	CTGAAG	5 cut(s)	30, 173, 179, 208, 1523
EcoRI	GAATTC	3 cut(s)	1357, 1718, 1727
EcoRII	CCWGG	5 cut(s)	414, 474, 628, 784, 1520
EcoT14I	CCWWGG	2 cut(s)	1177, 1255
EcoT22I	ATGCAT	1 cut(s)	1570
ErhI	CCWWGG	2 cut(s)	1177, 1255
FalI	AAGNNNNNCTT	4 cut(s)	484, 516, 511, 543
FaqI	GGGAC	1 cut(s)	646
FauI	CCCGC	1 cut(s)	1900
FauNDI	CATATG	2 cut(s)	85, 1570
FbaI	TGATCA	2 cut(s)	63, 117
Fnu4HI	GCNGC	4 cut(s)	175, 525, 828, 1302
FokI	GGATG	3 cut(s)	714, 754, 801
Fsp4HI	GCNGC	4 cut(s)	175, 525, 828, 1302
FspBI	CTAG	2 cut(s)	1742, 1899
GluI	GCNGC	4 cut(s)	175, 525, 828, 1302
GsuI	CTGGAG	1 cut(s)	1900
HaeIII	GGCC	1 cut(s)	1707
HapII	CCGG	3 cut(s)	607, 947, 1269
HgaI	GACGC	3 cut(s)	9, 254, 287
Hin1I	GRCGYC	3 cut(s)	246, 279, 366
HincII	GTYRAC	1 cut(s)	1487
HindII	GTYRAC	1 cut(s)	1487
HinfI	GANTC	9 cut(s)	73, 239, 293, 402, 1103, 1493, 1640, 1780, 1801
HpaII	CCGG	3 cut(s)	607, 947, 1269
HphI	GGTGA	8 cut(s)	110, 127, 1194, 1271, 1771, 1796, 1798, 1817
Hpy166II	GTNNAC	3 cut(s)	1060, 1487, 1819
Hpy8I	GTNNAC	3 cut(s)	1060, 1487, 1819
HpyAV	CCTTC	5 cut(s)	154, 445, 746, 1414, 1669
HpyCH4III	ACNGT	8 cut(s)	616, 637, 1064, 1072, 1097, 1453, 1611, 1823
HpyCH4IV	ACGT	5 cut(s)	288, 366, 378, 697, 1390
HpyF10VI	GCNNNNNNNGC	5 cut(s)	163, 318, 587, 1233, 1654
HpySE526I	ACGT	5 cut(s)	288, 366, 378, 697, 1390
Hsp92I	GRCGYC	3 cut(s)	246, 279, 366
Kpn2I	TCCGGA	1 cut(s)	606
Ksp22I	TGATCA	2 cut(s)	63, 117
KspI	CCGCGG	1 cut(s)	1758
Kzo9I	GATC	7 cut(s)	13, 63, 117, 411, 675, 811, 1083
LmnI	GCTCC	4 cut(s)	163, 949, 1678, 1919
Lsp1109I	GCAGC	3 cut(s)	186, 511, 1313
LweI	GCATC	2 cut(s)	786, 1507
MaeI	CTAG	2 cut(s)	1742, 1899
MaeII	ACGT	5 cut(s)	288, 366, 378, 697, 1390
MaeIII	GTNAC	7 cut(s)	21, 88, 98, 624, 1064, 1759, 1823
MalI	GATC	7 cut(s)	15, 65, 119, 413, 677, 813, 1085
MbiI	CCGCTC	1 cut(s)	1907
MboI	GATC	7 cut(s)	13, 63, 117, 411, 675, 811, 1083
MflI	RGATCY	2 cut(s)	675, 1083
MlyI	GAGTC	4 cut(s)	82, 1112, 1502, 1649
MmeI	TCCRAC	5 cut(s)	243, 267, 321, 366, 955
Mph1103I	ATGCAT	1 cut(s)	1570
MroI	TCCGGA	1 cut(s)	606
MroXI	GAANNNNTTC	2 cut(s)	690, 1656
MseI	TTAA	3 cut(s)	849, 966, 1927
MslI	CAYNNNNRTG	3 cut(s)	1383, 1596, 1665
MspA1I	CMGCKG	3 cut(s)	830, 1501, 1757
MspI	CCGG	3 cut(s)	607, 947, 1269
MspR9I	CCNGG	6 cut(s)	416, 476, 630, 786, 948, 1522
Mva1269I	GAATGC	1 cut(s)	1603
MvaI	CCWGG	5 cut(s)	416, 476, 630, 786, 1522
MvnI	CGCG	1 cut(s)	1757
MwoI	GCNNNNNNNGC	5 cut(s)	163, 318, 587, 1233, 1654
NciI	CCSGG	1 cut(s)	948
NcoI	CCATGG	1 cut(s)	1255
NdeI	CATATG	2 cut(s)	85, 1570
NdeII	GATC	7 cut(s)	13, 63, 117, 411, 675, 811, 1083
NlaIV	GGNNCC	3 cut(s)	826, 1864, 1915
NmuCI	GTSAC	5 cut(s)	21, 88, 98, 1759, 1823
NsiI	ATGCAT	1 cut(s)	1570
NspI	RCATGY	2 cut(s)	962, 1200
PaeI	GCATGC	1 cut(s)	962
PagI	TCATGA	1 cut(s)	60
PcsI	WCGNNNNNNNCGW	6 cut(s)	282, 285, 294, 363, 366, 375
PctI	GAATGC	1 cut(s)	1603
PdmI	GAANNNNTTC	2 cut(s)	690, 1656
PfeI	GAWTC	5 cut(s)	239, 293, 402, 1780, 1801
PflFI	GACNNNGTC	2 cut(s)	72, 365
PflMI	CCANNNNNTGG	1 cut(s)	821
PfoI	TCCNGGA	1 cut(s)	784
PkrI	GCNGC	4 cut(s)	176, 526, 829, 1303
PleI	GAGTC	4 cut(s)	81, 1111, 1501, 1648
PpsI	GAGTC	4 cut(s)	81, 1111, 1501, 1648
Ppu21I	YACGTR	1 cut(s)	698
PshBI	ATTAAT	1 cut(s)	849
Psp1406I	AACGTT	1 cut(s)	1390
Psp6I	CCWGG	5 cut(s)	414, 474, 628, 784, 1520
PspGI	CCWGG	5 cut(s)	414, 474, 628, 784, 1520
PspN4I	GGNNCC	3 cut(s)	826, 1864, 1915
PspPI	GGNCC	3 cut(s)	782, 1266, 1706
PstNI	CAGNNNCTG	1 cut(s)	1643
PsuI	RGATCY	2 cut(s)	675, 1083
PsyI	GACNNNGTC	2 cut(s)	72, 365
PvuII	CAGCTG	1 cut(s)	1501
RsaI	GTAC	4 cut(s)	884, 893, 1036, 1622
RsaNI	GTAC	4 cut(s)	883, 892, 1035, 1621
RseI	CAYNNNNRTG	3 cut(s)	1383, 1596, 1665
SacII	CCGCGG	1 cut(s)	1758
SaqAI	TTAA	3 cut(s)	849, 966, 1927
SatI	GCNGC	4 cut(s)	175, 525, 828, 1302
Sau3AI	GATC	7 cut(s)	13, 63, 117, 411, 675, 811, 1083
Sau96I	GGNCC	3 cut(s)	782, 1266, 1706
ScaI	AGTACT	2 cut(s)	884, 1622
SchI	GAGTC	4 cut(s)	82, 1112, 1502, 1649
ScrFI	CCNGG	6 cut(s)	416, 476, 630, 786, 948, 1522
SfaNI	GCATC	2 cut(s)	786, 1507
SfcI	CTRYAG	2 cut(s)	316, 615
Sfr303I	CCGCGG	1 cut(s)	1758
SgrBI	CCGCGG	1 cut(s)	1758
SinI	GGWCC	2 cut(s)	782, 1266
SmiMI	CAYNNNNRTG	3 cut(s)	1383, 1596, 1665
SmlI	CTYRAG	1 cut(s)	878
SmoI	CTYRAG	1 cut(s)	878
SpeI	ACTAGT	1 cut(s)	1898
SphI	GCATGC	1 cut(s)	962
SsiI	CCGC	5 cut(s)	828, 1272, 1755, 1757, 1907
SspMI	CTAG	2 cut(s)	1742, 1899
StyD4I	CCNGG	6 cut(s)	414, 474, 628, 784, 946, 1520
StyI	CCWWGG	2 cut(s)	1177, 1255
TaaI	ACNGT	8 cut(s)	616, 637, 1064, 1072, 1097, 1453, 1611, 1823
TaiI	ACGT	5 cut(s)	291, 369, 381, 700, 1393
TaqI	TCGA	3 cut(s)	369, 384, 1903
TaqII	GACCGA	1 cut(s)	1177
TatI	WGTACW	2 cut(s)	882, 1620
TauI	GCSGC	1 cut(s)	830
TfiI	GAWTC	5 cut(s)	239, 293, 402, 1780, 1801
Tru1I	TTAA	3 cut(s)	849, 966, 1927
Tru9I	TTAA	3 cut(s)	849, 966, 1927
TscAI	CASTG	2 cut(s)	1075, 1102
TseFI	GTSAC	5 cut(s)	21, 88, 98, 1759, 1823
TseI	GCWGC	3 cut(s)	174, 524, 1301
Tsp45I	GTSAC	5 cut(s)	21, 88, 98, 1759, 1823
TspGWI	ACGGA	3 cut(s)	85, 414, 1052
TspRI	CASTG	2 cut(s)	1075, 1102
Tth111I	GACNNNGTC	2 cut(s)	72, 365
Van91I	CCANNNNNTGG	1 cut(s)	821
VpaK11BI	GGWCC	2 cut(s)	782, 1266
VspI	ATTAAT	1 cut(s)	849
XapI	RAATTY	5 cut(s)	1214, 1220, 1357, 1718, 1727
XceI	RCATGY	2 cut(s)	962, 1200
XmnI	GAANNNNTTC	2 cut(s)	690, 1656
XspI	CTAG	2 cut(s)	1742, 1899
ZraI	GACGTC	1 cut(s)	367
ZrmI	AGTACT	2 cut(s)	884, 1622
Zsp2I	ATGCAT	1 cut(s)	1570

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.