Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000706.1

Orthogroup ID

OG0008201

Physical Location & Seq

Genomic Coordinates Reverse (-)

178918 .. 185759

Gene Structure 6842 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000706.1_g000043.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2037 bp

atgttaaggtttaagcaccggtgggccggattggaggggaaaggaggtcggtattgcggtcacgtgaatgccgagactcctgagagcacccaaacaccaaacgacgccttctcctcctcctccgtccaccaccgcggcggtttcctactcatcttctgctactacttcttcctcctctccctcactctcgcagcctgcgtcgtcggttcgtcgctcgctaattcaaccacccccgccgcctccgccgcctccgcaatggcggccatggagagcttgatcggcctcatcaatcggattcagagagcatgcacggtcctcggcgaccacggcggtggcgacgccggttcttctttgcctactctctgggaggagcttccctccgtcgccgtcgtcggaggtcagagttccggcaagtcgtcagtgttggagagcatagtcggccgcgattttcttccgagaggatcagggattgtgacaaggaggcctttggtgttgcagctgcacaagttagaacaggggatgcaggactatgctgagttcctccacttggacaagaaaagattcactgattttgttcggaaggaaattcaggttgaaacagacaggatgactgggaaatcaaaccggatttctaatgttcctattcatctcagcatatactccccaaatgagggacagccagagagtattgttcaagacatagaaaacatgcctaactgcataattctagcaataactcctgcaaatcaagacgtcgcaacatctgatgctatcaagatagcaagagaagtggatcctacaggtgacaggacatttggtgtgttgacaaagcttgatttaatggataggggaactaatgctttggatgttcttgaaggaagatcttataggcttaaacacccttgggttggaattgtgaaccgttcacaagctgacattaatacaaatatggatatggttgctgcaagaaggagagaaggtgactacttttctgctagtatggattatggacatttggtcaacaaaatgggttcagaatatcttgcaaaacttctctcaaagcatttagagtctgtaattaaagctcgaattccagcaattgcctctatgatcaataaaagtattgacgaacttgaatctgaattggatcattttggtaaacctgttgctatcgatgcaggggcccagttatatactatcttagagctgtgccgggcatttgaccagatattcaaggaacacttggatggaggacgacctggtggtgataggatatatgcagtatttgattacaagcttcctgttgatttgagaaggctcccttttgaccgtcatctttcactccaaaatgtaaggaaagtggtctcgcaggcagatggttaccagcctcatctaattgcacctgagcaaggttatcggcgcctcattgagagttcacttaacttttttagaggcccagcccaatcttcagtagatgaagtacgtgttcactttcttttgaaggaaattgtgagaaggtcaatcgcagaaactcaggagttgaggcgcttctcgactctgcaagcagaactggcaacagctgcttatgatgccctggagaggtttcgtgaagacagcaagaaaacgattttgcgattggtggacatggaatcctcatatctgacagtggatttcttccggagactccctcaagaagtggagaggggagaagcaatttcatcagtcgcctctgaagatcgatattctgaagggcacttccgcaggattggatcaaatgtttcctcctatgttgggatggtgtcagagacactgagaaattctataccaaaggctgttgttcattgtcaagtgagggaggctaagcggtctttgctcgatcacttctacactcaactgggcagaaaggagggaaggcaacttgcacaaatgctcgatgaaaatcctgaactgatggagaggagacaacaatgtgccaagaggcttcaactatgcaaggctgcaagggatgaaattgactcagtctcatggtccagatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000266 GO:0003674 GO:0003824 GO:0003924 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005773 GO:0005774 GO:0005856 GO:0005886 GO:0005911 GO:0006810 GO:0006950 GO:0006952 GO:0006996 GO:0007005 GO:0008017 GO:0008092 GO:0008150 GO:0009506 GO:0009524 GO:0009605 GO:0009607 GO:0009620 GO:0009987 GO:0010035 GO:0010038 GO:0015631 GO:0016020 GO:0016043 GO:0016192 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017111 GO:0030054 GO:0031090 GO:0042221 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046686 GO:0048285 GO:0050832 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055044 GO:0071840 GO:0071944 GO:0098542 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko04072 ko04144 ko04721 ko04961 ko05100 map04072 map04144 map04721 map04961 map05100

Pfam Domains

Protein Families

Dynamin_M Dynamin_N GED

Protein Analysis

678

Amino Acids

75.91

Weight (kDa)

7.31

Isoelectric Point (pI)

47.19

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008201)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g21040 FvH4_5g21040 FvH4_5g21040 FvH4_5g21040
malus_domestica	MD00G1084600.v1.1 MD00G1148500.v1.1
prunus_persica	Prupe.5G047800_v2.0.a1
pyrus_communis	pycom06g03450
rosa_chinensis	RchiOBHm_Chr5g0002991 RchiOBHm_Chr7g0208101
rosa_laevigata	RLG00000003255
rosa_multiflora	Rmu_sc0000706.1_g000043
rosa_roxburghii	Rroxscaffold_1G00005290 Rroxscaffold_1G00023360 Rroxscaffold_3G00250820
rosa_rugosa	Rorug04G0360400 Rorug07G0101300
rosa_samantha	Rh7AG234600 Rh7BG231000 Rh7CG250600 Rh7DG241400
rosa_wichuraiana	Rw5G034820 Rw7G020070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	756
AccB1I	GGYRCC	1 cut(s)	1419
AccII	CGCG	2 cut(s)	135, 444
AccIII	TCCGGA	1 cut(s)	1677
AclWI	GGATC	5 cut(s)	469, 788, 801, 1155, 1777
AcoI	YGGCCR	2 cut(s)	261, 439
AcsI	RAATTY	3 cut(s)	585, 1089, 1816
AcuI	CTGAAG	3 cut(s)	1452, 1752, 1767
AcvI	CACGTG	1 cut(s)	64
AcyI	GRCGYC	4 cut(s)	105, 339, 753, 1420
AfaI	GTAC	1 cut(s)	1482
AfiI	CCNNNNNNNGG	7 cut(s)	547, 670, 671, 908, 1409, 1599, 1791
AflIII	ACRYGT	1 cut(s)	1483
AgeI	ACCGGT	1 cut(s)	18
AgsI	TTSAA	8 cut(s)	225, 596, 695, 875, 1136, 1234, 1501, 1985
AhdI	GACNNNNNGTC	1 cut(s)	1016
AjnI	CCWGG	2 cut(s)	1258, 1593
AleI	CACNNNNGTG	1 cut(s)	330
AluBI	AGCT	9 cut(s)	273, 373, 499, 832, 932, 1085, 1207, 1297, 1580
AluI	AGCT	9 cut(s)	273, 373, 499, 832, 932, 1085, 1207, 1297, 1580
Alw21I	GWGCWC	1 cut(s)	89
Alw26I	GTCTC	6 cut(s)	68, 1369, 1675, 1799, 1954, 2026
AlwI	GGATC	5 cut(s)	469, 788, 801, 1155, 1777
Aor13HI	TCCGGA	1 cut(s)	1677
AoxI	GGCC	7 cut(s)	24, 261, 280, 439, 482, 1182, 1453
ApaI	GGGCCC	1 cut(s)	1186
ApeKI	GCWGC	6 cut(s)	191, 496, 499, 962, 1580, 1997
ApoI	RAATTY	3 cut(s)	585, 1089, 1816
ArsI	GACNNNNNNTTYG	2 cut(s)	797, 829
AseI	ATTAAT	1 cut(s)	939
AsiGI	ACCGGT	1 cut(s)	18
Asp700I	GAANNNNTTC	1 cut(s)	560
AspLEI	GCGC	2 cut(s)	1422, 1548
AspS9I	GGNCC	6 cut(s)	24, 313, 1182, 1183, 1454, 2028
AsuC2I	CCSGG	1 cut(s)	1214
AsuHPI	GGTGA	3 cut(s)	815, 992, 1277
AvaII	GGWCC	2 cut(s)	313, 2028
BaeGI	GKGCMC	2 cut(s)	1186, 1755
BamHI	GGATCC	1 cut(s)	793
BanI	GGYRCC	1 cut(s)	1419
BanII	GRGCYC	1 cut(s)	1186
BbrPI	CACGTG	1 cut(s)	64
BbsI	GAAGAC	1 cut(s)	1617
Bbv12I	GWGCWC	1 cut(s)	89
BbvI	GCAGC	6 cut(s)	203, 486, 508, 949, 1567, 1984
BccI	CCATC	4 cut(s)	1241, 1370, 1789, 1945
BceAI	ACGGC	2 cut(s)	343, 371
BcgI	CGANNNNNNTGC	4 cut(s)	298, 332, 1397, 1431
BciT130I	CCWGG	2 cut(s)	1260, 1595
BclI	TGATCA	1 cut(s)	1110
BcnI	CCSGG	1 cut(s)	1214
BcoDI	GTCTC	6 cut(s)	68, 1369, 1675, 1799, 1954, 2026
BfaI	CTAG	2 cut(s)	728, 996
BfmI	CTRYAG	1 cut(s)	798
BfoI	RGCGCY	2 cut(s)	1423, 1549
BglII	AGATCT	1 cut(s)	881
BlpI	GCTNAGC	1 cut(s)	1860
Bme1390I	CCNGG	3 cut(s)	1214, 1260, 1595
Bme18I	GGWCC	2 cut(s)	313, 2028
BmeRI	GACNNNNNGTC	1 cut(s)	1016
BmgT120I	GGNCC	6 cut(s)	24, 313, 1182, 1183, 1454, 2028
BmiI	GGNNCC	5 cut(s)	795, 1183, 1184, 1319, 1421
BmrFI	CCNGG	3 cut(s)	1214, 1260, 1595
BmrI	ACTGGG	3 cut(s)	621, 1180, 1904
BmsI	GCATC	4 cut(s)	510, 757, 1165, 1579
BmuI	ACTGGG	3 cut(s)	621, 1180, 1904
BpiI	GAAGAC	1 cut(s)	1617
BplI	GAGNNNNNCTC	4 cut(s)	362, 394, 1672, 1704
BpmI	CTGGAG	1 cut(s)	1616
Bpu10I	CCTNAGC	1 cut(s)	1404
Bpu1102I	GCTNAGC	1 cut(s)	1860
BpuEI	CTTGAG	1 cut(s)	1674
BpuMI	CCSGG	1 cut(s)	1214
Bsa29I	ATCGAT	2 cut(s)	1173, 1738
BsaAI	YACGTR	2 cut(s)	64, 1484
BsaBI	GATNNNNATC	1 cut(s)	1938
BsaHI	GRCGYC	4 cut(s)	105, 339, 753, 1420
BsaI	GGTCTC	1 cut(s)	1369
BsaJI	CCNNGG	6 cut(s)	133, 264, 316, 325, 902, 1593
BsaWI	WCCGGW	3 cut(s)	18, 624, 1677
BsaXI	ACNNNNNCTCC	4 cut(s)	95, 125, 964, 994
Bsc4I	CCNNNNNNNGG	7 cut(s)	547, 670, 671, 908, 1409, 1599, 1791
Bse118I	RCCGGY	2 cut(s)	18, 341
Bse1I	ACTGG	4 cut(s)	616, 1186, 1575, 1899
Bse3DI	GCAATG	1 cut(s)	261
Bse8I	GATNNNNATC	1 cut(s)	1938
BseAI	TCCGGA	1 cut(s)	1677
BseBI	CCWGG	2 cut(s)	1260, 1595
BseCI	ATCGAT	2 cut(s)	1173, 1738
BseDI	CCNNGG	6 cut(s)	133, 264, 316, 325, 902, 1593
BseGI	GGATG	6 cut(s)	525, 612, 871, 1252, 1800, 2011
BseJI	GATNNNNATC	1 cut(s)	1938
BseLI	CCNNNNNNNGG	7 cut(s)	547, 670, 671, 908, 1409, 1599, 1791
BseMI	GCAATG	1 cut(s)	261
BseMII	CTCAG	7 cut(s)	72, 525, 664, 1395, 1547, 1802, 2031
BseNI	ACTGG	4 cut(s)	616, 1186, 1575, 1899
BseRI	GAGGAG	6 cut(s)	103, 106, 109, 164, 383, 1972
BseSI	GKGCMC	2 cut(s)	1186, 1755
BseX3I	CGGCCG	1 cut(s)	439
BseXI	GCAGC	6 cut(s)	203, 486, 508, 949, 1567, 1984
BseYI	CCCAGC	1 cut(s)	1456
BsgI	GTGCAG	1 cut(s)	485
Bsh1236I	CGCG	2 cut(s)	135, 444
Bsh1285I	CGRYCG	1 cut(s)	442
BshFI	GGCC	7 cut(s)	26, 263, 282, 441, 484, 1184, 1455
BshNI	GGYRCC	1 cut(s)	1419
BshTI	ACCGGT	1 cut(s)	18
BshVI	ATCGAT	2 cut(s)	1173, 1738
BsiEI	CGRYCG	1 cut(s)	442
BsiHKAI	GWGCWC	1 cut(s)	89
BsiSI	CCGG	7 cut(s)	19, 27, 342, 408, 625, 1213, 1678
BslFI	GGGAC	1 cut(s)	687
BslI	CCNNNNNNNGG	7 cut(s)	547, 670, 671, 908, 1409, 1599, 1791
BsmAI	GTCTC	6 cut(s)	68, 1369, 1675, 1799, 1954, 2026
BsmFI	GGGAC	1 cut(s)	687
BsmI	GAATGC	1 cut(s)	73
BsnI	GGCC	7 cut(s)	26, 263, 282, 441, 484, 1184, 1455
Bso31I	GGTCTC	1 cut(s)	1369
Bsp120I	GGGCCC	1 cut(s)	1182
Bsp1286I	GDGCHC	3 cut(s)	89, 1186, 1755
Bsp13I	TCCGGA	1 cut(s)	1677
Bsp143I	GATC	9 cut(s)	276, 461, 793, 881, 1110, 1147, 1735, 1769, 1876
Bsp1720I	GCTNAGC	1 cut(s)	1860
Bsp19I	CCATGG	1 cut(s)	264
BspANI	GGCC	7 cut(s)	26, 263, 282, 441, 484, 1184, 1455
BspCNI	CTCAG	7 cut(s)	73, 526, 663, 1396, 1546, 1803, 2030
BspDI	ATCGAT	2 cut(s)	1173, 1738
BspEI	TCCGGA	1 cut(s)	1677
BspFNI	CGCG	2 cut(s)	135, 444
BspLI	GGNNCC	5 cut(s)	795, 1183, 1184, 1319, 1421
BspPI	GGATC	5 cut(s)	469, 788, 801, 1155, 1777
BspT107I	GGYRCC	1 cut(s)	1419
BspTNI	GGTCTC	1 cut(s)	1369
BsrDI	GCAATG	1 cut(s)	261
BsrFI	RCCGGY	2 cut(s)	18, 341
BsrI	ACTGG	4 cut(s)	616, 1186, 1575, 1899
BssAI	RCCGGY	2 cut(s)	18, 341
BssECI	CCNNGG	6 cut(s)	133, 264, 316, 325, 902, 1593
BssMI	GATC	9 cut(s)	276, 461, 793, 881, 1110, 1147, 1735, 1769, 1876
BssNI	GRCGYC	4 cut(s)	105, 339, 753, 1420
BssT1I	CCWWGG	2 cut(s)	264, 902
Bst2UI	CCWGG	2 cut(s)	1260, 1595
Bst4CI	ACNGT	4 cut(s)	313, 923, 1331, 1666
BstACI	GRCGYC	4 cut(s)	105, 339, 753, 1420
BstAPI	GCANNNNNTGC	1 cut(s)	1580
BstBAI	YACGTR	2 cut(s)	64, 1484
BstC8I	GCNNGC	5 cut(s)	196, 216, 307, 1371, 1563
BstDEI	CTNAG	9 cut(s)	81, 534, 650, 1201, 1404, 1533, 1811, 1860, 2017
BstDSI	CCRYGG	3 cut(s)	133, 264, 325
BstEII	GGTNACC	1 cut(s)	1379
BstENI	CCTNNNNNAGG	1 cut(s)	1407
BstF5I	GGATG	6 cut(s)	525, 612, 871, 1252, 1800, 2011
BstFNI	CGCG	2 cut(s)	135, 444
BstH2I	RGCGCY	2 cut(s)	1423, 1549
BstHHI	GCGC	2 cut(s)	1422, 1548
BstKTI	GATC	9 cut(s)	279, 464, 796, 884, 1113, 1150, 1738, 1772, 1879
BstMAI	GTCTC	6 cut(s)	68, 1369, 1675, 1799, 1954, 2026
BstMBI	GATC	9 cut(s)	276, 461, 793, 881, 1110, 1147, 1735, 1769, 1876
BstMCI	CGRYCG	1 cut(s)	442
BstNI	CCWGG	2 cut(s)	1260, 1595
BstNSI	RCATGY	2 cut(s)	309, 712
BstPI	GGTNACC	1 cut(s)	1379
BstSCI	CCNGG	3 cut(s)	1212, 1258, 1593
BstSFI	CTRYAG	1 cut(s)	798
BstSLI	GKGCMC	2 cut(s)	1186, 1755
BstUI	CGCG	2 cut(s)	135, 444
BstV1I	GCAGC	6 cut(s)	203, 486, 508, 949, 1567, 1984
BstV2I	GAAGAC	1 cut(s)	1617
BstX2I	RGATCY	2 cut(s)	793, 881
BstXI	CCANNNNNNTGG	1 cut(s)	332
BstYI	RGATCY	2 cut(s)	793, 881
BstZI	CGGCCG	1 cut(s)	439
Bsu15I	ATCGAT	2 cut(s)	1173, 1738
BsuRI	GGCC	7 cut(s)	26, 263, 282, 441, 484, 1184, 1455
BsuTUI	ATCGAT	2 cut(s)	1173, 1738
BtgI	CCRYGG	3 cut(s)	133, 264, 325
BtsCI	GGATG	6 cut(s)	525, 612, 871, 1252, 1800, 2011
BtsIMutI	CAGTG	4 cut(s)	426, 564, 1671, 1808
Cac8I	GCNNGC	5 cut(s)	196, 216, 307, 1371, 1563
CfoI	GCGC	2 cut(s)	1422, 1548
Cfr10I	RCCGGY	2 cut(s)	18, 341
Cfr13I	GGNCC	6 cut(s)	24, 313, 1182, 1183, 1454, 2028
Cfr42I	CCGCGG	1 cut(s)	136
ClaI	ATCGAT	2 cut(s)	1173, 1738
CseI	GACGC	3 cut(s)	113, 187, 347
CsiI	ACCWGGT	1 cut(s)	1258
Csp6I	GTAC	1 cut(s)	1481
CspAI	ACCGGT	1 cut(s)	18
CspCI	CAANNNNNGTGG	2 cut(s)	771, 806
CviAII	CATG	5 cut(s)	265, 306, 709, 1645, 2025
CviQI	GTAC	1 cut(s)	1481
DdeI	CTNAG	9 cut(s)	81, 534, 650, 1201, 1404, 1533, 1811, 1860, 2017
DinI	GGCGCC	1 cut(s)	1421
DpnI	GATC	9 cut(s)	278, 463, 795, 883, 1112, 1149, 1737, 1771, 1878
DpnII	GATC	9 cut(s)	276, 461, 793, 881, 1110, 1147, 1735, 1769, 1876
DriI	GACNNNNNGTC	1 cut(s)	1016
EaeI	YGGCCR	2 cut(s)	261, 439
EagI	CGGCCG	1 cut(s)	439
Eam1105I	GACNNNNNGTC	1 cut(s)	1016
EciI	GGCGGA	1 cut(s)	232
EclXI	CGGCCG	1 cut(s)	439
Eco130I	CCWWGG	2 cut(s)	264, 902
Eco147I	AGGCCT	1 cut(s)	484
Eco24I	GRGCYC	1 cut(s)	1186
Eco31I	GGTCTC	1 cut(s)	1369
Eco47I	GGWCC	2 cut(s)	313, 2028
Eco52I	CGGCCG	1 cut(s)	439
Eco57I	CTGAAG	3 cut(s)	1452, 1752, 1767
Eco72I	CACGTG	1 cut(s)	64
Eco91I	GGTNACC	1 cut(s)	1379
EcoNI	CCTNNNNNAGG	1 cut(s)	1407
EcoO109I	RGGNCCY	1 cut(s)	1182
EcoO65I	GGTNACC	1 cut(s)	1379
EcoRI	GAATTC	1 cut(s)	1089
EcoRII	CCWGG	2 cut(s)	1258, 1593
EcoT14I	CCWWGG	2 cut(s)	264, 902
EcoT38I	GRGCYC	1 cut(s)	1186
EgeI	GGCGCC	1 cut(s)	1421
EheI	GGCGCC	1 cut(s)	1421
ErhI	CCWWGG	2 cut(s)	264, 902
FaeI	CATG	5 cut(s)	268, 309, 712, 1648, 2028
FalI	AAGNNNNNCTT	6 cut(s)	469, 501, 1226, 1258, 1306, 1338
FaqI	GGGAC	1 cut(s)	687
FatI	CATG	5 cut(s)	264, 305, 708, 1644, 2024
FauI	CCCGC	1 cut(s)	241
FbaI	TGATCA	1 cut(s)	1110
FokI	GGATG	6 cut(s)	532, 619, 878, 1259, 1807, 2018
FriOI	GRGCYC	1 cut(s)	1186
FspBI	CTAG	2 cut(s)	728, 996
GlaI	GCGC	2 cut(s)	1421, 1547
GsaI	CCCAGC	1 cut(s)	1460
GsuI	CTGGAG	1 cut(s)	1616
HaeII	RGCGCY	2 cut(s)	1423, 1549
HaeIII	GGCC	7 cut(s)	26, 263, 282, 441, 484, 1184, 1455
HapII	CCGG	7 cut(s)	19, 27, 342, 408, 625, 1213, 1678
HgaI	GACGC	3 cut(s)	113, 187, 347
HhaI	GCGC	2 cut(s)	1422, 1548
Hin1I	GRCGYC	4 cut(s)	105, 339, 753, 1420
Hin1II	CATG	5 cut(s)	268, 309, 712, 1648, 2028
Hin6I	GCGC	2 cut(s)	1420, 1546
HinP1I	GCGC	2 cut(s)	1420, 1546
HincII	GTYRAC	2 cut(s)	825, 1021
HindII	GTYRAC	2 cut(s)	825, 1021
HindIII	AAGCTT	2 cut(s)	830, 1295
HinfI	GANTC	9 cut(s)	76, 295, 561, 1070, 1136, 1555, 1649, 1683, 2015
HpaII	CCGG	7 cut(s)	19, 27, 342, 408, 625, 1213, 1678
HphI	GGTGA	3 cut(s)	815, 992, 1277
Hpy166II	GTNNAC	9 cut(s)	127, 825, 919, 926, 1021, 1160, 1436, 1489, 1642
Hpy8I	GTNNAC	9 cut(s)	127, 825, 919, 926, 1021, 1160, 1436, 1489, 1642
Hpy99I	CGWCG	9 cut(s)	107, 203, 206, 214, 341, 386, 392, 395, 758
HpyCH4III	ACNGT	4 cut(s)	313, 923, 1331, 1666
HpyCH4IV	ACGT	3 cut(s)	63, 753, 1483
HpyF3I	CTNAG	9 cut(s)	81, 534, 650, 1201, 1404, 1533, 1811, 1860, 2017
HpySE526I	ACGT	3 cut(s)	63, 753, 1483
Hsp92I	GRCGYC	4 cut(s)	105, 339, 753, 1420
Hsp92II	CATG	5 cut(s)	268, 309, 712, 1648, 2028
HspAI	GCGC	2 cut(s)	1420, 1546
KasI	GGCGCC	1 cut(s)	1419
Kpn2I	TCCGGA	1 cut(s)	1677
Ksp22I	TGATCA	1 cut(s)	1110
KspI	CCGCGG	1 cut(s)	136
Kzo9I	GATC	9 cut(s)	276, 461, 793, 881, 1110, 1147, 1735, 1769, 1876
LmnI	GCTCC	2 cut(s)	370, 1323
Lsp1109I	GCAGC	6 cut(s)	203, 486, 508, 949, 1567, 1984
LweI	GCATC	4 cut(s)	510, 757, 1165, 1579
MabI	ACCWGGT	1 cut(s)	1258
MaeI	CTAG	2 cut(s)	728, 996
MaeII	ACGT	3 cut(s)	63, 753, 1483
MaeIII	GTNAC	5 cut(s)	59, 472, 803, 980, 1379
MalI	GATC	9 cut(s)	278, 463, 795, 883, 1112, 1149, 1737, 1771, 1878
MboI	GATC	9 cut(s)	276, 461, 793, 881, 1110, 1147, 1735, 1769, 1876
MboII	GAAGA	9 cut(s)	145, 160, 339, 443, 891, 1458, 1622, 1666, 1745
MfeI	CAATTG	1 cut(s)	1098
MflI	RGATCY	2 cut(s)	793, 881
MhlI	GDGCHC	3 cut(s)	89, 1186, 1755
Mly113I	GGCGCC	1 cut(s)	1420
MlyI	GAGTC	5 cut(s)	70, 1079, 1549, 1677, 2009
MmeI	TCCRAC	3 cut(s)	373, 405, 889
MroI	TCCGGA	1 cut(s)	1677
MroXI	GAANNNNTTC	1 cut(s)	560
MseI	TTAA	7 cut(s)	5, 12, 839, 894, 939, 1080, 1440
MslI	CAYNNNNRTG	3 cut(s)	66, 330, 1245
MspA1I	CMGCKG	3 cut(s)	135, 499, 1580
MspI	CCGG	7 cut(s)	19, 27, 342, 408, 625, 1213, 1678
MspR9I	CCNGG	3 cut(s)	1214, 1260, 1595
MunI	CAATTG	1 cut(s)	1098
Mva1269I	GAATGC	1 cut(s)	73
MvaI	CCWGG	2 cut(s)	1260, 1595
MvnI	CGCG	2 cut(s)	135, 444
NarI	GGCGCC	1 cut(s)	1420
NciI	CCSGG	1 cut(s)	1214
NcoI	CCATGG	1 cut(s)	264
NdeII	GATC	9 cut(s)	276, 461, 793, 881, 1110, 1147, 1735, 1769, 1876
NlaIII	CATG	5 cut(s)	268, 309, 712, 1648, 2028
NlaIV	GGNNCC	5 cut(s)	795, 1183, 1184, 1319, 1421
NmeAIII	GCCGAG	2 cut(s)	97, 297
NmuCI	GTSAC	4 cut(s)	59, 472, 803, 980
NspI	RCATGY	2 cut(s)	309, 712
OliI	CACNNNNGTG	1 cut(s)	330
PaeI	GCATGC	1 cut(s)	309
PceI	AGGCCT	1 cut(s)	484
PcsI	WCGNNNNNNNCGW	3 cut(s)	69, 195, 333
PctI	GAATGC	1 cut(s)	73
PdmI	GAANNNNTTC	1 cut(s)	560
PfeI	GAWTC	4 cut(s)	295, 561, 1136, 1649
PflFI	GACNNNGTC	1 cut(s)	2018
PinAI	ACCGGT	1 cut(s)	18
PleI	GAGTC	5 cut(s)	70, 1078, 1549, 1677, 2009
PluTI	GGCGCC	1 cut(s)	1423
PmaCI	CACGTG	1 cut(s)	64
PmlI	CACGTG	1 cut(s)	64
PpsI	GAGTC	5 cut(s)	70, 1078, 1549, 1677, 2009
Ppu21I	YACGTR	2 cut(s)	64, 1484
PshBI	ATTAAT	1 cut(s)	939
Psp6I	CCWGG	2 cut(s)	1258, 1593
PspCI	CACGTG	1 cut(s)	64
PspEI	GGTNACC	1 cut(s)	1379
PspFI	CCCAGC	1 cut(s)	1456
PspGI	CCWGG	2 cut(s)	1258, 1593
PspN4I	GGNNCC	5 cut(s)	795, 1183, 1184, 1319, 1421
PspOMI	GGGCCC	1 cut(s)	1182
PspPI	GGNCC	6 cut(s)	24, 313, 1182, 1183, 1454, 2028
PsuI	RGATCY	2 cut(s)	793, 881
PsyI	GACNNNGTC	1 cut(s)	2018
PvuII	CAGCTG	2 cut(s)	499, 1580
RsaI	GTAC	1 cut(s)	1482
RsaNI	GTAC	1 cut(s)	1481
RseI	CAYNNNNRTG	3 cut(s)	66, 330, 1245
SacII	CCGCGG	1 cut(s)	136
SaqAI	TTAA	7 cut(s)	5, 12, 839, 894, 939, 1080, 1440
Sau3AI	GATC	9 cut(s)	276, 461, 793, 881, 1110, 1147, 1735, 1769, 1876
Sau96I	GGNCC	6 cut(s)	24, 313, 1182, 1183, 1454, 2028
SchI	GAGTC	5 cut(s)	70, 1079, 1549, 1677, 2009
ScrFI	CCNGG	3 cut(s)	1214, 1260, 1595
SduI	GDGCHC	3 cut(s)	89, 1186, 1755
SexAI	ACCWGGT	1 cut(s)	1258
SfaNI	GCATC	4 cut(s)	510, 757, 1165, 1579
SfcI	CTRYAG	1 cut(s)	798
SfoI	GGCGCC	1 cut(s)	1421
Sfr303I	CCGCGG	1 cut(s)	136
SgrAI	CRCCGGYG	1 cut(s)	18
SgrBI	CCGCGG	1 cut(s)	136
SinI	GGWCC	2 cut(s)	313, 2028
SmiMI	CAYNNNNRTG	3 cut(s)	66, 330, 1245
SmlI	CTYRAG	1 cut(s)	1689
SmoI	CTYRAG	1 cut(s)	1689
SphI	GCATGC	1 cut(s)	309
SseBI	AGGCCT	1 cut(s)	484
SspDI	GGCGCC	1 cut(s)	1419
SspMI	CTAG	2 cut(s)	728, 996
StuI	AGGCCT	1 cut(s)	484
StyD4I	CCNGG	3 cut(s)	1212, 1258, 1593
StyI	CCWWGG	2 cut(s)	264, 902
TaaI	ACNGT	4 cut(s)	313, 923, 1331, 1666
TaiI	ACGT	3 cut(s)	66, 756, 1486
TaqI	TCGA	6 cut(s)	1087, 1173, 1553, 1738, 1875, 1932
TauI	GCSGC	5 cut(s)	138, 239, 248, 263, 444
TfiI	GAWTC	4 cut(s)	295, 561, 1136, 1649
Tru1I	TTAA	7 cut(s)	5, 12, 839, 894, 939, 1080, 1440
Tru9I	TTAA	7 cut(s)	5, 12, 839, 894, 939, 1080, 1440
TscAI	CASTG	4 cut(s)	426, 571, 1671, 1815
TseFI	GTSAC	4 cut(s)	59, 472, 803, 980
TseI	GCWGC	6 cut(s)	191, 496, 499, 962, 1580, 1997
Tsp45I	GTSAC	4 cut(s)	59, 472, 803, 980
TspDTI	ATGAA	6 cut(s)	635, 1491, 1707, 1829, 1950, 2022
TspGWI	ACGGA	2 cut(s)	112, 370
TspRI	CASTG	4 cut(s)	426, 571, 1671, 1815
Tth111I	GACNNNGTC	1 cut(s)	2018
VpaK11BI	GGWCC	2 cut(s)	313, 2028
VspI	ATTAAT	1 cut(s)	939
XagI	CCTNNNNNAGG	1 cut(s)	1407
XapI	RAATTY	3 cut(s)	585, 1089, 1816
XceI	RCATGY	2 cut(s)	309, 712
XmnI	GAANNNNTTC	1 cut(s)	560
XspI	CTAG	2 cut(s)	728, 996
ZraI	GACGTC	1 cut(s)	754

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.