Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0008201

Physical Location & Seq

Genomic Coordinates Reverse (-)

44648051 .. 44653808

Gene Structure 5758 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00250820.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1752 bp

ATGGCGGCCATGGAGAGCTTGATCGGCCTTGTCAATCGGATTCAGAGAGCATGCACTGTCCTCGGCGACCACGGCGGTGGCGACGCCGGTTCTTCTTTGCCTACTCTCTGGGAGGAGCTTCCCTCCGTCGCCGTCGTCGGAGGTCAGAGTTCCGGCAAGTCGTCGGTATTGGAAAGCATTGTCGGCCGCGATTTTCTTCCGAGAGGATCAGGGATTGTGACAAGGAGGCCTTTGGTGTTGCAGCTGCACAAGTTAGAACAGGGGATGCAGGACTATGCTGAGTTCCTCCACTTGGACAAGAAAAGATTCACTGATTTTGTTGTCAATTTAACATTGATAGATTTGCCTGGCTTAACTAAGGTTGCTGTAGAGGGGCAGCCAGAGAGTATTGTTCAAGACATAGAAAACATGGTTCGTTCTTATATAGCAAAGCCTAACTGCATAATTCTAGCAATAACTCCTGCGAATCAAGACGTAGCAACATCTGATGCTATCAAGATCGCAAGAGAAGTTGATCCTGCAGGTGACAGGACATTTGGTGTGTTGACAAAGCTTGATTTAATGGATAGGGGAACTAATGCTTTGGATGTTCTTGAAGGAAGATCTTATAGGCTTAAACACCCTTGGGTTGGAATTGTGAACCGTTCACAAGCTGACATTAATACAAATATGGATATGGTTGCTGCAAGAAGGAGAGAGGGTGACTACTTTTCTGCTAGTATGGATTATGGACATTTGGCCAGAAAAATGGGTTCAGAATATCTTGCAAAACTTCTCTCAGAGCATTTAGAGTCTGTAATTAAAGCTCGAATTCCAGCAATTGCTTCTATGATCAACAAAAGCATTGAGGAGCTTGAATCTGAATTATATCATTTTGGTAAACCTGTTGCTATTGATGCAGGGGCCCAGTTATATACTATCTTAGAGCTGTGCCGGGCATTTGACCAAATATTCAAGGAACACTTGGATGGAGGACGACCTGGTGGTGATCGGATATATGCAGTATTTGATTACAAGCTACCCGTTGATTTGAGAAGGCTCCCTTTTGACCGTCATCTTTCACTCCAAAATGTAAGGAAAGTGGTCTCGCAGGCAGATGGTTACCAGCCTCATCTAATTGCACCTGAGCAAGGTTATCGGCGCCTCATTGAGAGTTCACTCAACTATTTTAGAGGCCCAGCACAATCTTCAGTAGATGAAGTTCACTTTCTTTTGAAGGAAATTGTGAGAAGGTCAATCGGAGAAACTCAGGAGTTGAGGCGCTTTCCAACTCTTCAAGCAGAACTGGCAGCAGCTGCCTATGAAGCCTTGGAGAGGTTTCGGGAAGACAGCAAGAAAACGATTTTGCGATTGGTGGACATGGAATCCTCATATCTGACAGTGGATTTCTTCCGGAGACTCCCTCAAGAAGTGGAAAGGGGAGAAGCAATTTCATCTGTCGCCTCTGAAGATCGATATTCTGAAGGGCACTTCCGCAGGATTGGATCAAATGTTTCCTCCTATGTTGGGATGGTGTCAGAGACACTAAGAAATTCTATACCAAAGGCTGTTGTTCATTGTCAAGTGAGGGAGGCTAGGCGGTCTTTGCTCGATCACTTCTATACTCAACTGGGCAGAAAGGAGGGAAGGCAACTTGCACAAATGCTCGATGAAAATCCTGAACTGATGGAGAGGAGACAACAATGTGCCAAGAGGCTTCAACTATGCAAGGCTGCAAGGGATGAAATTGACTCAGTCTCATGGTCCAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000266 GO:0003674 GO:0003824 GO:0003924 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005773 GO:0005774 GO:0005856 GO:0005886 GO:0005911 GO:0006810 GO:0006950 GO:0006952 GO:0006996 GO:0007005 GO:0008017 GO:0008092 GO:0008150 GO:0009506 GO:0009524 GO:0009605 GO:0009607 GO:0009620 GO:0009987 GO:0010035 GO:0010038 GO:0015631 GO:0016020 GO:0016043 GO:0016192 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017111 GO:0030054 GO:0031090 GO:0042221 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046686 GO:0048285 GO:0050832 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055044 GO:0071840 GO:0071944 GO:0098542 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko04072 ko04144 ko04721 ko04961 ko05100 map04072 map04144 map04721 map04961 map05100

Pfam Domains

Protein Families

Dynamin_M Dynamin_N GED

Protein Analysis

583

Amino Acids

65.59

Weight (kDa)

6.57

Isoelectric Point (pI)

50.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Dynamin_N	PF00350	43 - 106	1.3e-17	Dynamin family
Dynamin_N	PF00350	107 - 185	1.1e-20	Dynamin family
Dynamin_M	PF01031	193 - 461	1.6e-58	Dynamin central region
GED	PF02212	487 - 579	8.7e-25	Dynamin GTPase effector domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008201)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g21040 FvH4_5g21040 FvH4_5g21040 FvH4_5g21040
malus_domestica	MD00G1084600.v1.1 MD00G1148500.v1.1
prunus_persica	Prupe.5G047800_v2.0.a1
pyrus_communis	pycom06g03450
rosa_chinensis	RchiOBHm_Chr5g0002991 RchiOBHm_Chr7g0208101
rosa_laevigata	RLG00000003255
rosa_multiflora	Rmu_sc0000706.1_g000043
rosa_roxburghii	Rroxscaffold_1G00005290 Rroxscaffold_1G00023360 Rroxscaffold_3G00250820
rosa_rugosa	Rorug04G0360400 Rorug07G0101300
rosa_samantha	Rh7AG234600 Rh7BG231000 Rh7CG250600 Rh7DG241400
rosa_wichuraiana	Rw5G034820 Rw7G020070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	512
Acc36I	ACCTGC	1 cut(s)	512
AccB1I	GGYRCC	1 cut(s)	1140
AccII	CGCG	1 cut(s)	189
AccIII	TCCGGA	1 cut(s)	1392
AciI	CCGC	5 cut(s)	5, 75, 187, 1474, 1579
AclWI	GGATC	3 cut(s)	214, 509, 1492
AcoI	YGGCCR	3 cut(s)	6, 184, 738
AcsI	RAATTY	2 cut(s)	810, 1531
AcuI	CTGAAG	3 cut(s)	1173, 1467, 1482
AcyI	GRCGYC	2 cut(s)	84, 1141
AfiI	CCNNNNNNNGG	5 cut(s)	292, 629, 1130, 1314, 1506
AgsI	TTSAA	7 cut(s)	395, 596, 857, 955, 1216, 1277, 1700
AjnI	CCWGG	2 cut(s)	346, 979
AleI	CACNNNNGTG	1 cut(s)	75
Alw26I	GTCTC	5 cut(s)	1090, 1390, 1514, 1669, 1741
AlwI	GGATC	3 cut(s)	214, 509, 1492
AlwNI	CAGNNNCTG	1 cut(s)	1295
Aor13HI	TCCGGA	1 cut(s)	1392
AoxI	GGCC	7 cut(s)	6, 25, 184, 227, 738, 903, 1174
ApaI	GGGCCC	1 cut(s)	907
ApeKI	GCWGC	8 cut(s)	241, 244, 376, 683, 1289, 1292, 1295, 1712
ApoI	RAATTY	2 cut(s)	810, 1531
ArsI	GACNNNNNNTTYG	2 cut(s)	518, 550
AseI	ATTAAT	1 cut(s)	660
Asp700I	GAANNNNTTC	1 cut(s)	305
AspLEI	GCGC	2 cut(s)	1143, 1263
AspS9I	GGNCC	4 cut(s)	903, 904, 1175, 1743
AsuC2I	CCSGG	1 cut(s)	935
AsuHPI	GGTGA	3 cut(s)	536, 713, 998
AvaII	GGWCC	1 cut(s)	1743
BaeGI	GKGCMC	2 cut(s)	907, 1470
BalI	TGGCCA	1 cut(s)	740
BanI	GGYRCC	1 cut(s)	1140
BanII	GRGCYC	1 cut(s)	907
BbsI	GAAGAC	1 cut(s)	1332
BbvI	GCAGC	8 cut(s)	231, 253, 388, 670, 1282, 1301, 1304, 1699
BccI	CCATC	4 cut(s)	962, 1091, 1504, 1660
BceAI	ACGGC	2 cut(s)	88, 116
BcgI	CGANNNNNNTGC	4 cut(s)	43, 77, 1118, 1152
BciT130I	CCWGG	2 cut(s)	348, 981
BclI	TGATCA	1 cut(s)	831
BcnI	CCSGG	1 cut(s)	935
BcoDI	GTCTC	5 cut(s)	1090, 1390, 1514, 1669, 1741
BfaI	CTAG	3 cut(s)	449, 717, 1575
BfmI	CTRYAG	2 cut(s)	366, 519
BfoI	RGCGCY	2 cut(s)	1144, 1264
BfuAI	ACCTGC	1 cut(s)	512
BglII	AGATCT	1 cut(s)	602
Bme1390I	CCNGG	3 cut(s)	348, 935, 981
Bme18I	GGWCC	1 cut(s)	1743
BmgT120I	GGNCC	4 cut(s)	903, 904, 1175, 1743
BmiI	GGNNCC	4 cut(s)	904, 905, 1040, 1142
BmrFI	CCNGG	3 cut(s)	348, 935, 981
BmrI	ACTGGG	2 cut(s)	901, 1619
BmsI	GCATC	3 cut(s)	255, 478, 886
BmuI	ACTGGG	2 cut(s)	901, 1619
BpiI	GAAGAC	1 cut(s)	1332
BplI	GAGNNNNNCTC	4 cut(s)	107, 139, 1387, 1419
Bpu10I	CCTNAGC	1 cut(s)	1125
BpuEI	CTTGAG	1 cut(s)	1389
BpuMI	CCSGG	1 cut(s)	935
Bsa29I	ATCGAT	1 cut(s)	1453
BsaBI	GATNNNNATC	1 cut(s)	1653
BsaHI	GRCGYC	2 cut(s)	84, 1141
BsaI	GGTCTC	1 cut(s)	1090
BsaJI	CCNNGG	5 cut(s)	9, 61, 70, 623, 1308
BsaWI	WCCGGW	1 cut(s)	1392
BsaXI	ACNNNNNCTCC	2 cut(s)	685, 715
Bsc4I	CCNNNNNNNGG	5 cut(s)	292, 629, 1130, 1314, 1506
Bse118I	RCCGGY	1 cut(s)	86
Bse1I	ACTGG	3 cut(s)	907, 1290, 1614
Bse8I	GATNNNNATC	1 cut(s)	1653
BseAI	TCCGGA	1 cut(s)	1392
BseBI	CCWGG	2 cut(s)	348, 981
BseCI	ATCGAT	1 cut(s)	1453
BseDI	CCNNGG	5 cut(s)	9, 61, 70, 623, 1308
BseGI	GGATG	5 cut(s)	270, 592, 973, 1515, 1726
BseJI	GATNNNNATC	1 cut(s)	1653
BseLI	CCNNNNNNNGG	5 cut(s)	292, 629, 1130, 1314, 1506
BseMII	CTCAG	5 cut(s)	270, 792, 1116, 1262, 1746
BseNI	ACTGG	3 cut(s)	907, 1290, 1614
BseRI	GAGGAG	3 cut(s)	128, 863, 1687
BseSI	GKGCMC	2 cut(s)	907, 1470
BseX3I	CGGCCG	1 cut(s)	184
BseXI	GCAGC	8 cut(s)	231, 253, 388, 670, 1282, 1301, 1304, 1699
BseYI	CCCAGC	1 cut(s)	1177
BsgI	GTGCAG	1 cut(s)	230
Bsh1236I	CGCG	1 cut(s)	189
Bsh1285I	CGRYCG	1 cut(s)	187
BshFI	GGCC	7 cut(s)	8, 27, 186, 229, 740, 905, 1176
BshNI	GGYRCC	1 cut(s)	1140
BshVI	ATCGAT	1 cut(s)	1453
BsiEI	CGRYCG	1 cut(s)	187
BsiSI	CCGG	4 cut(s)	87, 153, 934, 1393
BslI	CCNNNNNNNGG	5 cut(s)	292, 629, 1130, 1314, 1506
BsmAI	GTCTC	5 cut(s)	1090, 1390, 1514, 1669, 1741
BsnI	GGCC	7 cut(s)	8, 27, 186, 229, 740, 905, 1176
Bso31I	GGTCTC	1 cut(s)	1090
Bsp120I	GGGCCC	1 cut(s)	903
Bsp1286I	GDGCHC	2 cut(s)	907, 1470
Bsp13I	TCCGGA	1 cut(s)	1392
Bsp19I	CCATGG	1 cut(s)	9
BspACI	CCGC	5 cut(s)	5, 75, 187, 1474, 1579
BspANI	GGCC	7 cut(s)	8, 27, 186, 229, 740, 905, 1176
BspCNI	CTCAG	5 cut(s)	271, 791, 1117, 1261, 1745
BspDI	ATCGAT	1 cut(s)	1453
BspEI	TCCGGA	1 cut(s)	1392
BspFNI	CGCG	1 cut(s)	189
BspLI	GGNNCC	4 cut(s)	904, 905, 1040, 1142
BspMAI	CTGCAG	1 cut(s)	523
BspMI	ACCTGC	1 cut(s)	512
BspPI	GGATC	3 cut(s)	214, 509, 1492
BspT107I	GGYRCC	1 cut(s)	1140
BspTNI	GGTCTC	1 cut(s)	1090
BsrFI	RCCGGY	1 cut(s)	86
BsrI	ACTGG	3 cut(s)	907, 1290, 1614
BssAI	RCCGGY	1 cut(s)	86
BssECI	CCNNGG	5 cut(s)	9, 61, 70, 623, 1308
BssNI	GRCGYC	2 cut(s)	84, 1141
BssT1I	CCWWGG	3 cut(s)	9, 623, 1308
Bst2UI	CCWGG	2 cut(s)	348, 981
Bst4CI	ACNGT	4 cut(s)	58, 644, 1052, 1381
Bst6I	CTCTTC	1 cut(s)	1278
BstACI	GRCGYC	2 cut(s)	84, 1141
BstAPI	GCANNNNNTGC	1 cut(s)	1295
BstC8I	GCNNGC	2 cut(s)	52, 1092
BstDEI	CTNAG	8 cut(s)	279, 357, 778, 922, 1125, 1248, 1526, 1732
BstDSI	CCRYGG	2 cut(s)	9, 70
BstEII	GGTNACC	1 cut(s)	1100
BstENI	CCTNNNNNAGG	2 cut(s)	1128, 1312
BstF5I	GGATG	5 cut(s)	270, 592, 973, 1515, 1726
BstFNI	CGCG	1 cut(s)	189
BstH2I	RGCGCY	2 cut(s)	1144, 1264
BstHHI	GCGC	2 cut(s)	1143, 1263
BstMAI	GTCTC	5 cut(s)	1090, 1390, 1514, 1669, 1741
BstMCI	CGRYCG	1 cut(s)	187
BstMWI	GCNNNNNNNGC	8 cut(s)	24, 72, 183, 896, 1286, 1295, 1304, 1585
BstNI	CCWGG	2 cut(s)	348, 981
BstNSI	RCATGY	1 cut(s)	54
BstPI	GGTNACC	1 cut(s)	1100
BstSCI	CCNGG	3 cut(s)	346, 933, 979
BstSFI	CTRYAG	2 cut(s)	366, 519
BstSLI	GKGCMC	2 cut(s)	907, 1470
BstUI	CGCG	1 cut(s)	189
BstV1I	GCAGC	8 cut(s)	231, 253, 388, 670, 1282, 1301, 1304, 1699
BstV2I	GAAGAC	1 cut(s)	1332
BstX2I	RGATCY	1 cut(s)	602
BstXI	CCANNNNNNTGG	2 cut(s)	77, 748
BstYI	RGATCY	1 cut(s)	602
BstZI	CGGCCG	1 cut(s)	184
Bsu15I	ATCGAT	1 cut(s)	1453
BsuRI	GGCC	7 cut(s)	8, 27, 186, 229, 740, 905, 1176
BsuTUI	ATCGAT	1 cut(s)	1453
BtgI	CCRYGG	2 cut(s)	9, 70
BtsCI	GGATG	5 cut(s)	270, 592, 973, 1515, 1726
BtsIMutI	CAGTG	3 cut(s)	54, 309, 1386
BveI	ACCTGC	1 cut(s)	512
Cac8I	GCNNGC	2 cut(s)	52, 1092
CaiI	CAGNNNCTG	1 cut(s)	1295
CfoI	GCGC	2 cut(s)	1143, 1263
Cfr10I	RCCGGY	1 cut(s)	86
Cfr13I	GGNCC	4 cut(s)	903, 904, 1175, 1743
ClaI	ATCGAT	1 cut(s)	1453
CseI	GACGC	1 cut(s)	92
CsiI	ACCWGGT	1 cut(s)	979
CviAII	CATG	5 cut(s)	10, 51, 409, 1360, 1740
DdeI	CTNAG	8 cut(s)	279, 357, 778, 922, 1125, 1248, 1526, 1732
DinI	GGCGCC	1 cut(s)	1142
EaeI	YGGCCR	3 cut(s)	6, 184, 738
EagI	CGGCCG	1 cut(s)	184
Eam1104I	CTCTTC	1 cut(s)	1278
EarI	CTCTTC	1 cut(s)	1278
EclXI	CGGCCG	1 cut(s)	184
Eco130I	CCWWGG	3 cut(s)	9, 623, 1308
Eco147I	AGGCCT	1 cut(s)	229
Eco24I	GRGCYC	1 cut(s)	907
Eco31I	GGTCTC	1 cut(s)	1090
Eco47I	GGWCC	1 cut(s)	1743
Eco52I	CGGCCG	1 cut(s)	184
Eco57I	CTGAAG	3 cut(s)	1173, 1467, 1482
Eco91I	GGTNACC	1 cut(s)	1100
EcoNI	CCTNNNNNAGG	2 cut(s)	1128, 1312
EcoO109I	RGGNCCY	1 cut(s)	903
EcoO65I	GGTNACC	1 cut(s)	1100
EcoRI	GAATTC	1 cut(s)	810
EcoRII	CCWGG	2 cut(s)	346, 979
EcoT14I	CCWWGG	3 cut(s)	9, 623, 1308
EcoT38I	GRGCYC	1 cut(s)	907
EgeI	GGCGCC	1 cut(s)	1142
EheI	GGCGCC	1 cut(s)	1142
ErhI	CCWWGG	3 cut(s)	9, 623, 1308
FaeI	CATG	5 cut(s)	13, 54, 412, 1363, 1743
FalI	AAGNNNNNCTT	6 cut(s)	214, 246, 947, 979, 1027, 1059
FatI	CATG	5 cut(s)	9, 50, 408, 1359, 1739
FbaI	TGATCA	1 cut(s)	831
FokI	GGATG	5 cut(s)	277, 599, 980, 1522, 1733
FriOI	GRGCYC	1 cut(s)	907
FspBI	CTAG	3 cut(s)	449, 717, 1575
GlaI	GCGC	2 cut(s)	1142, 1262
GsaI	CCCAGC	1 cut(s)	1181
HaeII	RGCGCY	2 cut(s)	1144, 1264
HaeIII	GGCC	7 cut(s)	8, 27, 186, 229, 740, 905, 1176
HapII	CCGG	4 cut(s)	87, 153, 934, 1393
HgaI	GACGC	1 cut(s)	92
HhaI	GCGC	2 cut(s)	1143, 1263
Hin1I	GRCGYC	2 cut(s)	84, 1141
Hin1II	CATG	5 cut(s)	13, 54, 412, 1363, 1743
Hin6I	GCGC	2 cut(s)	1141, 1261
HinP1I	GCGC	2 cut(s)	1141, 1261
HincII	GTYRAC	1 cut(s)	546
HindII	GTYRAC	1 cut(s)	546
HindIII	AAGCTT	1 cut(s)	551
HinfI	GANTC	8 cut(s)	40, 306, 466, 791, 857, 1364, 1398, 1730
HpaII	CCGG	4 cut(s)	87, 153, 934, 1393
HphI	GGTGA	3 cut(s)	536, 713, 998
Hpy166II	GTNNAC	7 cut(s)	546, 640, 647, 881, 1157, 1204, 1357
Hpy8I	GTNNAC	7 cut(s)	546, 640, 647, 881, 1157, 1204, 1357
Hpy99I	CGWCG	5 cut(s)	86, 131, 137, 140, 166
HpyAV	CCTTC	7 cut(s)	590, 684, 1029, 1210, 1224, 1457, 1620
HpyCH4III	ACNGT	4 cut(s)	58, 644, 1052, 1381
HpyCH4IV	ACGT	1 cut(s)	474
HpyF10VI	GCNNNNNNNGC	8 cut(s)	24, 72, 183, 896, 1286, 1295, 1304, 1585
HpyF3I	CTNAG	8 cut(s)	279, 357, 778, 922, 1125, 1248, 1526, 1732
HpySE526I	ACGT	1 cut(s)	474
Hsp92I	GRCGYC	2 cut(s)	84, 1141
Hsp92II	CATG	5 cut(s)	13, 54, 412, 1363, 1743
HspAI	GCGC	2 cut(s)	1141, 1261
KasI	GGCGCC	1 cut(s)	1140
Kpn2I	TCCGGA	1 cut(s)	1392
Ksp22I	TGATCA	1 cut(s)	831
LmnI	GCTCC	3 cut(s)	115, 850, 1044
Lsp1109I	GCAGC	8 cut(s)	231, 253, 388, 670, 1282, 1301, 1304, 1699
LweI	GCATC	3 cut(s)	255, 478, 886
MabI	ACCWGGT	1 cut(s)	979
MaeI	CTAG	3 cut(s)	449, 717, 1575
MaeII	ACGT	1 cut(s)	474
MaeIII	GTNAC	4 cut(s)	217, 524, 701, 1100
MboII	GAAGA	8 cut(s)	84, 188, 612, 1179, 1265, 1337, 1381, 1460
MfeI	CAATTG	1 cut(s)	819
MflI	RGATCY	1 cut(s)	602
MhlI	GDGCHC	2 cut(s)	907, 1470
MlsI	TGGCCA	1 cut(s)	740
MluNI	TGGCCA	1 cut(s)	740
Mly113I	GGCGCC	1 cut(s)	1141
MlyI	GAGTC	3 cut(s)	800, 1392, 1724
MmeI	TCCRAC	3 cut(s)	118, 610, 1292
Mox20I	TGGCCA	1 cut(s)	740
MroI	TCCGGA	1 cut(s)	1392
MroXI	GAANNNNTTC	1 cut(s)	305
MscI	TGGCCA	1 cut(s)	740
MseI	TTAA	6 cut(s)	329, 353, 560, 615, 660, 801
MslI	CAYNNNNRTG	2 cut(s)	75, 966
Msp20I	TGGCCA	1 cut(s)	740
MspA1I	CMGCKG	2 cut(s)	244, 1295
MspI	CCGG	4 cut(s)	87, 153, 934, 1393
MspR9I	CCNGG	3 cut(s)	348, 935, 981
MunI	CAATTG	1 cut(s)	819
MvaI	CCWGG	2 cut(s)	348, 981
MvnI	CGCG	1 cut(s)	189
MwoI	GCNNNNNNNGC	8 cut(s)	24, 72, 183, 896, 1286, 1295, 1304, 1585
NarI	GGCGCC	1 cut(s)	1141
NciI	CCSGG	1 cut(s)	935
NcoI	CCATGG	1 cut(s)	9
NlaIII	CATG	5 cut(s)	13, 54, 412, 1363, 1743
NlaIV	GGNNCC	4 cut(s)	904, 905, 1040, 1142
NmeAIII	GCCGAG	1 cut(s)	42
NmuCI	GTSAC	3 cut(s)	217, 524, 701
NspI	RCATGY	1 cut(s)	54
OliI	CACNNNNGTG	1 cut(s)	75
PaeI	GCATGC	1 cut(s)	54
PaqCI	CACCTGC	1 cut(s)	512
PceI	AGGCCT	1 cut(s)	229
PcsI	WCGNNNNNNNCGW	1 cut(s)	78
PdmI	GAANNNNTTC	1 cut(s)	305
PfeI	GAWTC	5 cut(s)	40, 306, 466, 857, 1364
PflFI	GACNNNGTC	1 cut(s)	1733
PleI	GAGTC	3 cut(s)	799, 1392, 1724
PluTI	GGCGCC	1 cut(s)	1144
PpsI	GAGTC	3 cut(s)	799, 1392, 1724
PshBI	ATTAAT	1 cut(s)	660
Psp6I	CCWGG	2 cut(s)	346, 979
PspEI	GGTNACC	1 cut(s)	1100
PspFI	CCCAGC	1 cut(s)	1177
PspGI	CCWGG	2 cut(s)	346, 979
PspN4I	GGNNCC	4 cut(s)	904, 905, 1040, 1142
PspOMI	GGGCCC	1 cut(s)	903
PspPI	GGNCC	4 cut(s)	903, 904, 1175, 1743
PsrI	GAACNNNNNNTAC	2 cut(s)	1185, 1217
PstI	CTGCAG	1 cut(s)	523
PstNI	CAGNNNCTG	1 cut(s)	1295
PsuI	RGATCY	1 cut(s)	602
PsyI	GACNNNGTC	1 cut(s)	1733
PvuII	CAGCTG	2 cut(s)	244, 1295
RseI	CAYNNNNRTG	2 cut(s)	75, 966
SaqAI	TTAA	6 cut(s)	329, 353, 560, 615, 660, 801
Sau96I	GGNCC	4 cut(s)	903, 904, 1175, 1743
SbfI	CCTGCAGG	1 cut(s)	523
SchI	GAGTC	3 cut(s)	800, 1392, 1724
ScrFI	CCNGG	3 cut(s)	348, 935, 981
SdaI	CCTGCAGG	1 cut(s)	523
SduI	GDGCHC	2 cut(s)	907, 1470
SexAI	ACCWGGT	1 cut(s)	979
SfaNI	GCATC	3 cut(s)	255, 478, 886
SfcI	CTRYAG	2 cut(s)	366, 519
SfoI	GGCGCC	1 cut(s)	1142
SinI	GGWCC	1 cut(s)	1743
SmiMI	CAYNNNNRTG	2 cut(s)	75, 966
SmlI	CTYRAG	1 cut(s)	1404
SmoI	CTYRAG	1 cut(s)	1404
SphI	GCATGC	1 cut(s)	54
Sse8387I	CCTGCAGG	1 cut(s)	523
SseBI	AGGCCT	1 cut(s)	229
SsiI	CCGC	5 cut(s)	5, 75, 187, 1474, 1579
SspDI	GGCGCC	1 cut(s)	1140
SspI	AATATT	1 cut(s)	951
SspMI	CTAG	3 cut(s)	449, 717, 1575
StuI	AGGCCT	1 cut(s)	229
StyD4I	CCNGG	3 cut(s)	346, 933, 979
StyI	CCWWGG	3 cut(s)	9, 623, 1308
TaaI	ACNGT	4 cut(s)	58, 644, 1052, 1381
TaiI	ACGT	1 cut(s)	477
TaqI	TCGA	4 cut(s)	808, 1453, 1590, 1647
TauI	GCSGC	2 cut(s)	8, 189
TfiI	GAWTC	5 cut(s)	40, 306, 466, 857, 1364
Tru1I	TTAA	6 cut(s)	329, 353, 560, 615, 660, 801
Tru9I	TTAA	6 cut(s)	329, 353, 560, 615, 660, 801
TscAI	CASTG	3 cut(s)	61, 316, 1386
TseFI	GTSAC	3 cut(s)	217, 524, 701
TseI	GCWGC	8 cut(s)	241, 244, 376, 683, 1289, 1292, 1295, 1712
Tsp45I	GTSAC	3 cut(s)	217, 524, 701
TspDTI	ATGAA	6 cut(s)	1212, 1317, 1422, 1544, 1665, 1737
TspGWI	ACGGA	1 cut(s)	115
TspRI	CASTG	3 cut(s)	61, 316, 1386
Tth111I	GACNNNGTC	1 cut(s)	1733
VpaK11BI	GGWCC	1 cut(s)	1743
VspI	ATTAAT	1 cut(s)	660
XagI	CCTNNNNNAGG	2 cut(s)	1128, 1312
XapI	RAATTY	2 cut(s)	810, 1531
XceI	RCATGY	1 cut(s)	54
XmnI	GAANNNNTTC	1 cut(s)	305
XspI	CTAG	3 cut(s)	449, 717, 1575

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.