Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0005944

Physical Location & Seq

Genomic Coordinates Forward (+)

8000000 .. 8004480

Gene Structure 4481 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0101300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1653 bp

ATGGCTAGTCAAGGCGGTTCTTCGAGGAGAAGTCTGTCTATGACGAACGCATCGTTGCAGGAGAAGAAGAAATCCTCTGAGAGTCATCATGGAGGTGGAGGCCATGATGCCGGCAGAAAATCGCTTTCGGCGTCTCGTCCTCCAGTGGGGTTAACCGGAGAGCGCACGGTAAAACGTTTGCGGCTATCAAAGGCTCTAACGGTACCTGAAAGTACTAGTATTCAAGAAGCTTGTCGTCGGATGGCTGCTCGTAGAGTTGATGCGTTGTTGTTAACCGACTCTAATGCATTGCTTTGTGGAATACTTACCGACAAGGATATAGCAACGAGAGTTATTGCACGCGAGCTTAATCTTGAGGAAACACTTGTTTCTAAAGTTATGACGAGGAACCCAATATTTGTACTTTCTGACACTCTTGCAGTCGAAGCCCTTCAGAAGATGGTTCAAGGAAAATTCAGACATTTGCCTGTGGTGGAGAATGGAGAGGTCATTGCTTTGCTAGATATAGCAAAGTGTTTGTATGATGCTATTGCTCGAATGGAAAGGGCAGCTGAAAAGGGAAAGGCTATTGCTGCTGCTGTGGAAGGTGTTGAAAAACATTGGGGCAGCTCTAATTCTGGTTCCAATACATTCGTTGAAACACTTCGTGAAAAGTTGTTTAGGCCATCTTTGTCTACAATCATTCCGGAGAATACAAAGGTCTTGACAGTTTCGCCAACAGATACAGTTTTGGCAACAGCAAAGAAGATGCAGGAGATGCGAATTAGTTCTGCAGTTGTGACAGTTGATAACAAGCCACGAGGAATTCTTACTTCAAAGGATATTTTGATGCGGGTCGTATCACAAAATCTTCCTCCAAAGACCACCCTTGTAGAGAAGGTCATGACTCCAAATCCAGAATGTGCCTCGGTTGATACACCAATTGTTGATGCACTGCACACTATGCATGATGGAAAATTTTTGCACCTGCCTGTAGTAGACAGAGATGGAGGTATAGTTGCTGTTGTTGATGTAATTCATATCACTCATGCTGCTGTGGCCACTGTTGGAAATAGTGCTGGAGTGTTTAATGAGACTGCAAGTACTATGATGCAGAAGTTTTGGGATTCTGCCATGGCCTTAAGTCCAAATGATGAAGATGAGGAATGTCGAAGTGAAAATTCTTTAAGACTGGCTTCTGAGGGAGCAGAGACTAGGGGGTCACATCCCTTTCCATCACCAATTTTTCCAAATACTTTTGCTTTCAAGATTCAGGATAAGAAAGGCCGAATGCACAGATTTACTTGCAATATTCAGAGTTTGACTGATCTTATAACTTCCATTATTCATAGAATGGGAGATGACATTGACCGCCACAACCTTCCTCAGATTTTGTATGAAGACGAAGATCGTGATAAAGTAATATTGGCATCCGATAGTGATCTCGCTGCAGCCGTGGACCATGCCAGGCAAGTTGGTTGGAAGGGCTTGAGATTGCATTTAGATTTCTCAAAAACACCTGGTCGTCGTCGAAGGGCTACAGCTGGTGGAACCATGGATTATGCTTATGCAGATTCTGCTTGGGCATCAGCATACAGTGCCGTGGCAGCTGGGGCTGCAATTGCTGCTGGCTTTGGCGTTTTGGCATACTTGAAGAGAGCCGGCAATAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000266 GO:0003674 GO:0003824 GO:0003924 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005773 GO:0005774 GO:0005856 GO:0005886 GO:0005911 GO:0006810 GO:0006950 GO:0006952 GO:0006996 GO:0007005 GO:0008017 GO:0008092 GO:0008150 GO:0009506 GO:0009524 GO:0009605 GO:0009607 GO:0009620 GO:0009987 GO:0010035 GO:0010038 GO:0015631 GO:0016020 GO:0016043 GO:0016192 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017111 GO:0030054 GO:0031090 GO:0042221 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046686 GO:0048285 GO:0050832 GO:0050896 GO:0051179 GO:0051234 GO:0051704 GO:0051707 GO:0055044 GO:0071840 GO:0071944 GO:0098542 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko04072 ko04144 ko04721 ko04961 ko05100 map04072 map04144 map04721 map04961 map05100

Pfam Domains

Protein Families

Dynamin_M Dynamin_N GED

Protein Analysis

550

Amino Acids

59.64

Weight (kDa)

8.74

Isoelectric Point (pI)

45.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CBS	PF00571	63 - 110	1e-07	CBS domain
CBS	PF00571	123 - 167	1.1e-08	CBS domain
CBS	PF00571	231 - 279	1.9e-08	CBS domain
CBS	PF00571	291 - 344	7.8e-09	CBS domain
PB1	PF00564	412 - 495	2.1e-15	PB1 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005944)

Species	Orthologous Gene IDs
rosa_laevigata	RLG00000023647 RLG00000023653 RLG00000023665
rosa_multiflora	Rmu_sc0000968.1_g000012 Rmu_sc0001262.1_g000012 Rmu_sc0001518.1_g000014 Rmu_sc0002766.1_g000007 Rmu_sc0003078.1_g000002 Rmu_sc0005657.1_g000062 Rmu_sc0005657.1_g000063 Rmu_sc0012126.1_g000001 Rmu_sc0030925.1_g000001
rosa_roxburghii	Rroxscaffold_2G00108950 Rroxscaffold_6G00403400
rosa_rugosa	Rorug01G0021800 Rorug01G0146300.1 Rorug03G0358800.1 Rorug05G0241400 Rorug07G0101300
rosa_samantha	Rh1AG149600 Rh1BG381400 Rh1CG140700 Rh1CG395300 Rh3AG216500 Rh3AG217400 Rh3BG249600 Rh3CG245900 Rh6DG353100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1313
AarI	CACCTGC	1 cut(s)	975
AasI	GACNNNNNNGTC	1 cut(s)	1198
Acc36I	ACCTGC	1 cut(s)	975
Acc65I	GGTACC	1 cut(s)	202
AccB1I	GGYRCC	1 cut(s)	202
AccI	GTMKAC	2 cut(s)	674, 978
AccII	CGCG	1 cut(s)	342
AccIII	TCCGGA	1 cut(s)	685
AciI	CCGC	4 cut(s)	15, 181, 832, 1351
AclI	AACGTT	1 cut(s)	175
AcoI	YGGCCR	1 cut(s)	1038
AcsI	RAATTY	4 cut(s)	452, 804, 956, 1159
AcuI	CTGAAG	1 cut(s)	416
AcyI	GRCGYC	1 cut(s)	131
AdeI	CACNNNGTG	1 cut(s)	647
AfaI	GTAC	4 cut(s)	204, 214, 402, 1084
AfiI	CCNNNNNNNGG	1 cut(s)	146
AflII	CTTAAG	1 cut(s)	1120
AgsI	TTSAA	7 cut(s)	224, 446, 593, 638, 816, 1246, 1633
AhlI	ACTAGT	1 cut(s)	215
AjnI	CCWGG	2 cut(s)	1445, 1498
AluBI	AGCT	6 cut(s)	230, 346, 551, 609, 1523, 1589
AluI	AGCT	6 cut(s)	230, 346, 551, 609, 1523, 1589
Alw26I	GTCTC	3 cut(s)	138, 1067, 1184
AlwNI	CAGNNNCTG	1 cut(s)	1556
Aor13HI	TCCGGA	1 cut(s)	685
AoxI	GGCC	5 cut(s)	100, 662, 1038, 1116, 1264
ApoI	RAATTY	4 cut(s)	452, 804, 956, 1159
Asp700I	GAANNNNTTC	3 cut(s)	429, 642, 766
Asp718I	GGTACC	1 cut(s)	202
AspLEI	GCGC	1 cut(s)	165
AspS9I	GGNCC	1 cut(s)	1438
AsuHPI	GGTGA	1 cut(s)	1209
AvaII	GGWCC	1 cut(s)	1438
BalI	TGGCCA	1 cut(s)	1040
BanI	GGYRCC	1 cut(s)	202
BauI	CACGAG	1 cut(s)	798
BbsI	GAAGAC	1 cut(s)	1386
BccI	CCATC	6 cut(s)	235, 433, 673, 944, 980, 1222
BceAI	ACGGC	2 cut(s)	1418, 1565
BcgI	CGANNNNNNTGC	2 cut(s)	266, 300
BciT130I	CCWGG	2 cut(s)	1447, 1500
BcoDI	GTCTC	3 cut(s)	138, 1067, 1184
BcuI	ACTAGT	1 cut(s)	215
BfaI	CTAG	4 cut(s)	6, 216, 500, 1194
BfmI	CTRYAG	4 cut(s)	771, 972, 1428, 1518
BfrI	CTTAAG	1 cut(s)	1120
BfuAI	ACCTGC	1 cut(s)	975
BmcAI	AGTACT	2 cut(s)	214, 1084
Bme1390I	CCNGG	2 cut(s)	1447, 1500
Bme18I	GGWCC	1 cut(s)	1438
BmgT120I	GGNCC	1 cut(s)	1438
BmiI	GGNNCC	4 cut(s)	204, 389, 622, 1531
BmrFI	CCNGG	2 cut(s)	1447, 1500
BpiI	GAAGAC	1 cut(s)	1386
BpmI	CTGGAG	2 cut(s)	126, 1080
BpuEI	CTTGAG	2 cut(s)	374, 1489
BsaBI	GATNNNNATC	1 cut(s)	1419
BsaHI	GRCGYC	1 cut(s)	131
BsaJI	CCNNGG	5 cut(s)	906, 1113, 1434, 1533, 1581
BsaWI	WCCGGW	2 cut(s)	155, 685
BsaXI	ACNNNNNCTCC	2 cut(s)	981, 1011
Bsc4I	CCNNNNNNNGG	1 cut(s)	146
Bse118I	RCCGGY	2 cut(s)	110, 1640
Bse1I	ACTGG	2 cut(s)	143, 1176
Bse3DI	GCAATG	2 cut(s)	287, 489
Bse8I	GATNNNNATC	1 cut(s)	1419
BseAI	TCCGGA	1 cut(s)	685
BseBI	CCWGG	2 cut(s)	1447, 1500
BseDI	CCNNGG	5 cut(s)	906, 1113, 1434, 1533, 1581
BseGI	GGATG	3 cut(s)	246, 1204, 1409
BseJI	GATNNNNATC	1 cut(s)	1419
BseLI	CCNNNNNNNGG	1 cut(s)	146
BseMI	GCAATG	2 cut(s)	287, 489
BseMII	CTCAG	3 cut(s)	69, 1170, 1379
BseNI	ACTGG	2 cut(s)	143, 1176
BseRI	GAGGAG	1 cut(s)	40
BseYI	CCCAGC	1 cut(s)	1589
BsgI	GTGCAG	1 cut(s)	920
Bsh1236I	CGCG	1 cut(s)	342
BshFI	GGCC	5 cut(s)	102, 664, 1040, 1118, 1266
BshNI	GGYRCC	1 cut(s)	202
BsiSI	CCGG	4 cut(s)	111, 156, 686, 1641
BslI	CCNNNNNNNGG	1 cut(s)	146
BsmAI	GTCTC	3 cut(s)	138, 1067, 1184
BsmBI	CGTCTC	1 cut(s)	138
BsmI	GAATGC	1 cut(s)	1275
BsnI	GGCC	5 cut(s)	102, 664, 1040, 1118, 1266
Bsp13I	TCCGGA	1 cut(s)	685
Bsp143I	GATC	3 cut(s)	1306, 1387, 1420
Bsp19I	CCATGG	2 cut(s)	1113, 1533
BspACI	CCGC	4 cut(s)	15, 181, 832, 1351
BspANI	GGCC	5 cut(s)	102, 664, 1040, 1118, 1266
BspCNI	CTCAG	3 cut(s)	70, 1171, 1378
BspEI	TCCGGA	1 cut(s)	685
BspFNI	CGCG	1 cut(s)	342
BspHI	TCATGA	1 cut(s)	882
BspLI	GGNNCC	4 cut(s)	204, 389, 622, 1531
BspMAI	CTGCAG	2 cut(s)	775, 1432
BspMI	ACCTGC	1 cut(s)	975
BspT107I	GGYRCC	1 cut(s)	202
BspTI	CTTAAG	1 cut(s)	1120
BsrDI	GCAATG	2 cut(s)	287, 489
BsrFI	RCCGGY	2 cut(s)	110, 1640
BsrI	ACTGG	2 cut(s)	143, 1176
BssAI	RCCGGY	2 cut(s)	110, 1640
BssECI	CCNNGG	5 cut(s)	906, 1113, 1434, 1533, 1581
BssMI	GATC	3 cut(s)	1306, 1387, 1420
BssNI	GRCGYC	1 cut(s)	131
BssSI	CACGAG	1 cut(s)	798
BssT1I	CCWWGG	2 cut(s)	1113, 1533
Bst2BI	CACGAG	1 cut(s)	798
Bst2UI	CCWGG	2 cut(s)	1447, 1500
Bst4CI	ACNGT	7 cut(s)	169, 202, 709, 727, 784, 1045, 1577
Bst6I	CTCTTC	1 cut(s)	1628
BstACI	GRCGYC	1 cut(s)	131
BstAFI	CTTAAG	1 cut(s)	1120
BstAPI	GCANNNNNTGC	5 cut(s)	757, 943, 1556, 1577, 1604
BstC8I	GCNNGC	5 cut(s)	112, 340, 344, 1609, 1642
BstDEI	CTNAG	3 cut(s)	78, 1179, 1365
BstDSI	CCRYGG	4 cut(s)	1113, 1434, 1533, 1581
BstF5I	GGATG	3 cut(s)	246, 1204, 1409
BstFNI	CGCG	1 cut(s)	342
BstHHI	GCGC	1 cut(s)	165
BstKTI	GATC	3 cut(s)	1309, 1390, 1423
BstMAI	GTCTC	3 cut(s)	138, 1067, 1184
BstMBI	GATC	3 cut(s)	1306, 1387, 1420
BstNI	CCWGG	2 cut(s)	1447, 1500
BstSCI	CCNGG	2 cut(s)	1445, 1498
BstSFI	CTRYAG	4 cut(s)	771, 972, 1428, 1518
BstUI	CGCG	1 cut(s)	342
BstV2I	GAAGAC	1 cut(s)	1386
BsuRI	GGCC	5 cut(s)	102, 664, 1040, 1118, 1266
BtgI	CCRYGG	4 cut(s)	1113, 1434, 1533, 1581
BtsCI	GGATG	3 cut(s)	246, 1204, 1409
BtsI	GCAGTG	1 cut(s)	932
BtsIMutI	CAGTG	4 cut(s)	150, 932, 1041, 1582
BveI	ACCTGC	1 cut(s)	975
Cac8I	GCNNGC	5 cut(s)	112, 340, 344, 1609, 1642
CaiI	CAGNNNCTG	1 cut(s)	1556
CciI	TCATGA	1 cut(s)	882
CfoI	GCGC	1 cut(s)	165
Cfr10I	RCCGGY	2 cut(s)	110, 1640
Cfr13I	GGNCC	1 cut(s)	1438
CseI	GACGC	1 cut(s)	120
CsiI	ACCWGGT	1 cut(s)	1498
Csp6I	GTAC	4 cut(s)	203, 213, 401, 1083
CviAII	CATG	8 cut(s)	89, 104, 883, 947, 1028, 1114, 1442, 1534
CviQI	GTAC	4 cut(s)	203, 213, 401, 1083
DdeI	CTNAG	3 cut(s)	78, 1179, 1365
DpnI	GATC	3 cut(s)	1308, 1389, 1422
DpnII	GATC	3 cut(s)	1306, 1387, 1420
DraIII	CACNNNGTG	1 cut(s)	647
DrdI	GACNNNNNNGTC	1 cut(s)	1198
DseDI	GACNNNNNNGTC	1 cut(s)	1198
EaeI	YGGCCR	1 cut(s)	1038
Eam1104I	CTCTTC	1 cut(s)	1628
EarI	CTCTTC	1 cut(s)	1628
Eco130I	CCWWGG	2 cut(s)	1113, 1533
Eco47I	GGWCC	1 cut(s)	1438
Eco57I	CTGAAG	1 cut(s)	416
EcoRI	GAATTC	1 cut(s)	804
EcoRII	CCWGG	2 cut(s)	1445, 1498
EcoT14I	CCWWGG	2 cut(s)	1113, 1533
EcoT22I	ATGCAT	2 cut(s)	289, 948
ErhI	CCWWGG	2 cut(s)	1113, 1533
Esp3I	CGTCTC	1 cut(s)	138
FaeI	CATG	8 cut(s)	92, 107, 886, 950, 1031, 1117, 1445, 1537
FalI	AAGNNNNNCTT	2 cut(s)	1159, 1191
FatI	CATG	8 cut(s)	88, 103, 882, 946, 1027, 1113, 1441, 1533
FauI	CCCGC	1 cut(s)	825
FblI	GTMKAC	2 cut(s)	674, 978
FokI	GGATG	3 cut(s)	253, 1191, 1396
FspBI	CTAG	4 cut(s)	6, 216, 500, 1194
GlaI	GCGC	1 cut(s)	164
GsaI	CCCAGC	1 cut(s)	1593
GsuI	CTGGAG	2 cut(s)	126, 1080
HaeIII	GGCC	5 cut(s)	102, 664, 1040, 1118, 1266
HapII	CCGG	4 cut(s)	111, 156, 686, 1641
HgaI	GACGC	1 cut(s)	120
HhaI	GCGC	1 cut(s)	165
Hin1I	GRCGYC	1 cut(s)	131
Hin1II	CATG	8 cut(s)	92, 107, 886, 950, 1031, 1117, 1445, 1537
Hin6I	GCGC	1 cut(s)	163
HinP1I	GCGC	1 cut(s)	163
HincII	GTYRAC	2 cut(s)	153, 273
HindII	GTYRAC	2 cut(s)	153, 273
HindIII	AAGCTT	1 cut(s)	228
HinfI	GANTC	6 cut(s)	82, 278, 886, 1106, 1249, 1553
HpaI	GTTAAC	2 cut(s)	153, 273
HpaII	CCGG	4 cut(s)	111, 156, 686, 1641
HphI	GGTGA	1 cut(s)	1209
Hpy166II	GTNNAC	5 cut(s)	153, 273, 675, 979, 1438
Hpy188I	TCNGA	9 cut(s)	79, 240, 409, 435, 458, 1180, 1296, 1368, 1414
Hpy8I	GTNNAC	5 cut(s)	153, 273, 675, 979, 1438
Hpy99I	CGWCG	3 cut(s)	240, 1509, 1512
HpyAV	CCTTC	6 cut(s)	440, 578, 871, 1370, 1456, 1506
HpyCH4III	ACNGT	7 cut(s)	169, 202, 709, 727, 784, 1045, 1577
HpyCH4IV	ACGT	1 cut(s)	175
HpyF3I	CTNAG	3 cut(s)	78, 1179, 1365
HpySE526I	ACGT	1 cut(s)	175
Hsp92I	GRCGYC	1 cut(s)	131
Hsp92II	CATG	8 cut(s)	92, 107, 886, 950, 1031, 1117, 1445, 1537
HspAI	GCGC	1 cut(s)	163
Kpn2I	TCCGGA	1 cut(s)	685
KpnI	GGTACC	1 cut(s)	206
KroI	GCCGGC	2 cut(s)	110, 1640
KroNI	GCCGGC	2 cut(s)	112, 1642
KspAI	GTTAAC	2 cut(s)	153, 273
Kzo9I	GATC	3 cut(s)	1306, 1387, 1420
LmnI	GCTCC	1 cut(s)	1184
MabI	ACCWGGT	1 cut(s)	1498
MaeI	CTAG	4 cut(s)	6, 216, 500, 1194
MaeII	ACGT	1 cut(s)	175
MaeIII	GTNAC	2 cut(s)	778, 1200
MalI	GATC	3 cut(s)	1308, 1389, 1422
MboI	GATC	3 cut(s)	1306, 1387, 1420
MfeI	CAATTG	2 cut(s)	921, 1599
MlsI	TGGCCA	1 cut(s)	1040
MluNI	TGGCCA	1 cut(s)	1040
MlyI	GAGTC	3 cut(s)	91, 272, 880
MmeI	TCCRAC	3 cut(s)	218, 1027, 1439
Mox20I	TGGCCA	1 cut(s)	1040
Mph1103I	ATGCAT	2 cut(s)	289, 948
MroI	TCCGGA	1 cut(s)	685
MroNI	GCCGGC	2 cut(s)	110, 1640
MroXI	GAANNNNTTC	3 cut(s)	429, 642, 766
MscI	TGGCCA	1 cut(s)	1040
MseI	TTAA	6 cut(s)	152, 272, 348, 1068, 1121, 1166
MslI	CAYNNNNRTG	1 cut(s)	93
Msp20I	TGGCCA	1 cut(s)	1040
MspA1I	CMGCKG	3 cut(s)	551, 1523, 1589
MspCI	CTTAAG	1 cut(s)	1120
MspI	CCGG	4 cut(s)	111, 156, 686, 1641
MspR9I	CCNGG	2 cut(s)	1447, 1500
MunI	CAATTG	2 cut(s)	921, 1599
Mva1269I	GAATGC	1 cut(s)	1275
MvaI	CCWGG	2 cut(s)	1447, 1500
MvnI	CGCG	1 cut(s)	342
NaeI	GCCGGC	2 cut(s)	112, 1642
NcoI	CCATGG	2 cut(s)	1113, 1533
NdeII	GATC	3 cut(s)	1306, 1387, 1420
NgoMIV	GCCGGC	2 cut(s)	110, 1640
NlaIII	CATG	8 cut(s)	92, 107, 886, 950, 1031, 1117, 1445, 1537
NlaIV	GGNNCC	4 cut(s)	204, 389, 622, 1531
NmuCI	GTSAC	2 cut(s)	778, 1200
NsiI	ATGCAT	2 cut(s)	289, 948
PagI	TCATGA	1 cut(s)	882
PaqCI	CACCTGC	1 cut(s)	975
PcsI	WCGNNNNNNNCGW	3 cut(s)	50, 128, 1431
PctI	GAATGC	1 cut(s)	1275
PdiI	GCCGGC	2 cut(s)	112, 1642
PdmI	GAANNNNTTC	3 cut(s)	429, 642, 766
PfeI	GAWTC	3 cut(s)	1106, 1249, 1553
PleI	GAGTC	3 cut(s)	90, 272, 880
PpsI	GAGTC	3 cut(s)	90, 272, 880
PsiI	TTATAA	1 cut(s)	1313
Psp1406I	AACGTT	1 cut(s)	175
Psp6I	CCWGG	2 cut(s)	1445, 1498
PspFI	CCCAGC	1 cut(s)	1589
PspGI	CCWGG	2 cut(s)	1445, 1498
PspN4I	GGNNCC	4 cut(s)	204, 389, 622, 1531
PspPI	GGNCC	1 cut(s)	1438
PstI	CTGCAG	2 cut(s)	775, 1432
PstNI	CAGNNNCTG	1 cut(s)	1556
PvuII	CAGCTG	3 cut(s)	551, 1523, 1589
RsaI	GTAC	4 cut(s)	204, 214, 402, 1084
RsaNI	GTAC	4 cut(s)	203, 213, 401, 1083
RseI	CAYNNNNRTG	1 cut(s)	93
SaqAI	TTAA	6 cut(s)	152, 272, 348, 1068, 1121, 1166
Sau3AI	GATC	3 cut(s)	1306, 1387, 1420
Sau96I	GGNCC	1 cut(s)	1438
ScaI	AGTACT	2 cut(s)	214, 1084
SchI	GAGTC	3 cut(s)	91, 272, 880
ScrFI	CCNGG	2 cut(s)	1447, 1500
SexAI	ACCWGGT	1 cut(s)	1498
SfcI	CTRYAG	4 cut(s)	771, 972, 1428, 1518
SinI	GGWCC	1 cut(s)	1438
SmiMI	CAYNNNNRTG	1 cut(s)	93
SmlI	CTYRAG	3 cut(s)	353, 1120, 1468
SmoI	CTYRAG	3 cut(s)	353, 1120, 1468
SpeI	ACTAGT	1 cut(s)	215
SsiI	CCGC	4 cut(s)	15, 181, 832, 1351
SspI	AATATT	3 cut(s)	396, 1291, 1404
SspMI	CTAG	4 cut(s)	6, 216, 500, 1194
StyD4I	CCNGG	2 cut(s)	1445, 1498
StyI	CCWWGG	2 cut(s)	1113, 1533
TaaI	ACNGT	7 cut(s)	169, 202, 709, 727, 784, 1045, 1577
TaiI	ACGT	1 cut(s)	178
TaqI	TCGA	5 cut(s)	23, 423, 535, 1150, 1510
TatI	WGTACW	3 cut(s)	212, 400, 1082
TauI	GCSGC	1 cut(s)	184
TfiI	GAWTC	3 cut(s)	1106, 1249, 1553
Tru1I	TTAA	6 cut(s)	152, 272, 348, 1068, 1121, 1166
Tru9I	TTAA	6 cut(s)	152, 272, 348, 1068, 1121, 1166
TscAI	CASTG	4 cut(s)	150, 939, 1048, 1582
TseFI	GTSAC	2 cut(s)	778, 1200
Tsp45I	GTSAC	2 cut(s)	778, 1200
TspDTI	ATGAA	4 cut(s)	1007, 1149, 1316, 1392
TspRI	CASTG	4 cut(s)	150, 939, 1048, 1582
Vha464I	CTTAAG	1 cut(s)	1120
VpaK11BI	GGWCC	1 cut(s)	1438
XapI	RAATTY	4 cut(s)	452, 804, 956, 1159
XmiI	GTMKAC	2 cut(s)	674, 978
XmnI	GAANNNNTTC	3 cut(s)	429, 642, 766
XspI	CTAG	4 cut(s)	6, 216, 500, 1194
ZrmI	AGTACT	2 cut(s)	214, 1084
Zsp2I	ATGCAT	2 cut(s)	289, 948

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.