Pre-mRNA-splicing factor
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000023647 RLG00000023653 RLG00000023665 |
| rosa_multiflora | Rmu_sc0000968.1_g000012 Rmu_sc0001262.1_g000012 Rmu_sc0001518.1_g000014 Rmu_sc0002766.1_g000007 Rmu_sc0003078.1_g000002 Rmu_sc0005657.1_g000062 Rmu_sc0005657.1_g000063 Rmu_sc0012126.1_g000001 Rmu_sc0030925.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00108950 Rroxscaffold_6G00403400 |
| rosa_rugosa | Rorug01G0021800 Rorug01G0146300.1 Rorug03G0358800.1 Rorug05G0241400 Rorug07G0101300 |
| rosa_samantha | Rh1AG149600 Rh1BG381400 Rh1CG140700 Rh1CG395300 Rh3AG216500 Rh3AG217400 Rh3BG249600 Rh3CG245900 Rh6DG353100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 245 |
| AccII | CGCG | 1 cut(s) | 153 |
| AciI | CCGC | 5 cut(s) | 5, 30, 136, 151, 301 |
| AclWI | GGATC | 1 cut(s) | 218 |
| AfaI | GTAC | 1 cut(s) | 216 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 242 |
| AjiI | CACGTC | 1 cut(s) | 118 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 93, 125 |
| AlwI | GGATC | 1 cut(s) | 218 |
| ApeKI | GCWGC | 1 cut(s) | 232 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 146, 178 |
| AsuHPI | GGTGA | 2 cut(s) | 202, 212 |
| BanI | GGYRCC | 1 cut(s) | 245 |
| BbvI | GCAGC | 1 cut(s) | 244 |
| BccI | CCATC | 1 cut(s) | 200 |
| BfaI | CTAG | 1 cut(s) | 304 |
| BisI | GCNGC | 1 cut(s) | 233 |
| BlsI | GCNGC | 1 cut(s) | 234 |
| BmgBI | CACGTC | 1 cut(s) | 118 |
| BmiI | GGNNCC | 2 cut(s) | 103, 247 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 11, 43 |
| BpmI | CTGGAG | 2 cut(s) | 22, 46 |
| Bsa29I | ATCGAT | 1 cut(s) | 179 |
| BsaJI | CCNNGG | 3 cut(s) | 12, 97, 272 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 65, 95 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 242 |
| BseCI | ATCGAT | 1 cut(s) | 179 |
| BseDI | CCNNGG | 3 cut(s) | 12, 97, 272 |
| BseGI | GGATG | 2 cut(s) | 132, 264 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 242 |
| BseRI | GAGGAG | 4 cut(s) | 29, 32, 43, 83 |
| BseXI | GCAGC | 1 cut(s) | 244 |
| Bsh1236I | CGCG | 1 cut(s) | 153 |
| BshNI | GGYRCC | 1 cut(s) | 245 |
| BshVI | ATCGAT | 1 cut(s) | 179 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 242 |
| Bsp143I | GATC | 2 cut(s) | 41, 210 |
| BspACI | CCGC | 5 cut(s) | 5, 30, 136, 151, 301 |
| BspDI | ATCGAT | 1 cut(s) | 179 |
| BspFNI | CGCG | 1 cut(s) | 153 |
| BspLI | GGNNCC | 2 cut(s) | 103, 247 |
| BspPI | GGATC | 1 cut(s) | 218 |
| BspT107I | GGYRCC | 1 cut(s) | 245 |
| BssECI | CCNNGG | 3 cut(s) | 12, 97, 272 |
| BssMI | GATC | 2 cut(s) | 41, 210 |
| BssT1I | CCWWGG | 1 cut(s) | 272 |
| Bst4CI | ACNGT | 3 cut(s) | 106, 128, 219 |
| BstDSI | CCRYGG | 1 cut(s) | 97 |
| BstF5I | GGATG | 2 cut(s) | 132, 264 |
| BstFNI | CGCG | 1 cut(s) | 153 |
| BstKTI | GATC | 2 cut(s) | 44, 213 |
| BstMBI | GATC | 2 cut(s) | 41, 210 |
| BstUI | CGCG | 1 cut(s) | 153 |
| BstV1I | GCAGC | 1 cut(s) | 244 |
| Bsu15I | ATCGAT | 1 cut(s) | 179 |
| BsuTUI | ATCGAT | 1 cut(s) | 179 |
| BtgI | CCRYGG | 1 cut(s) | 97 |
| BtrI | CACGTC | 1 cut(s) | 118 |
| BtsCI | GGATG | 2 cut(s) | 132, 264 |
| ClaI | ATCGAT | 1 cut(s) | 179 |
| Csp6I | GTAC | 1 cut(s) | 215 |
| CviJI | RGCY | 1 cut(s) | 235 |
| CviKI_1 | RGCY | 1 cut(s) | 235 |
| CviQI | GTAC | 1 cut(s) | 215 |
| DpnI | GATC | 2 cut(s) | 43, 212 |
| DpnII | GATC | 2 cut(s) | 41, 210 |
| EciI | GGCGGA | 1 cut(s) | 19 |
| Eco130I | CCWWGG | 1 cut(s) | 272 |
| EcoT14I | CCWWGG | 1 cut(s) | 272 |
| ErhI | CCWWGG | 1 cut(s) | 272 |
| FauI | CCCGC | 1 cut(s) | 158 |
| Fnu4HI | GCNGC | 1 cut(s) | 233 |
| FokI | GGATG | 2 cut(s) | 119, 251 |
| Fsp4HI | GCNGC | 1 cut(s) | 233 |
| FspBI | CTAG | 1 cut(s) | 304 |
| GluI | GCNGC | 1 cut(s) | 233 |
| GsuI | CTGGAG | 2 cut(s) | 22, 46 |
| HinfI | GANTC | 1 cut(s) | 285 |
| HphI | GGTGA | 2 cut(s) | 202, 212 |
| Hpy188I | TCNGA | 2 cut(s) | 13, 290 |
| Hpy188III | TCNNGA | 1 cut(s) | 39 |
| Hpy99I | CGWCG | 1 cut(s) | 110 |
| HpyCH4III | ACNGT | 3 cut(s) | 106, 128, 219 |
| HpyCH4IV | ACGT | 1 cut(s) | 117 |
| HpySE526I | ACGT | 1 cut(s) | 117 |
| Kzo9I | GATC | 2 cut(s) | 41, 210 |
| LpnPI | CCDG | 3 cut(s) | 52, 76, 249 |
| Lsp1109I | GCAGC | 1 cut(s) | 244 |
| MaeI | CTAG | 1 cut(s) | 304 |
| MaeII | ACGT | 1 cut(s) | 117 |
| MaeIII | GTNAC | 1 cut(s) | 128 |
| MalI | GATC | 2 cut(s) | 43, 212 |
| MboI | GATC | 2 cut(s) | 41, 210 |
| MboII | GAAGA | 1 cut(s) | 215 |
| MseI | TTAA | 1 cut(s) | 252 |
| MvnI | CGCG | 1 cut(s) | 153 |
| NdeII | GATC | 2 cut(s) | 41, 210 |
| NlaIV | GGNNCC | 2 cut(s) | 103, 247 |
| NmuCI | GTSAC | 1 cut(s) | 128 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 114 |
| PfeI | GAWTC | 1 cut(s) | 285 |
| PflFI | GACNNNGTC | 1 cut(s) | 260 |
| PkrI | GCNGC | 1 cut(s) | 234 |
| PspN4I | GGNNCC | 2 cut(s) | 103, 247 |
| PsyI | GACNNNGTC | 1 cut(s) | 260 |
| RsaI | GTAC | 1 cut(s) | 216 |
| RsaNI | GTAC | 1 cut(s) | 215 |
| SaqAI | TTAA | 1 cut(s) | 252 |
| SatI | GCNGC | 1 cut(s) | 233 |
| Sau3AI | GATC | 2 cut(s) | 41, 210 |
| SetI | ASST | 5 cut(s) | 62, 71, 81, 120, 274 |
| SsiI | CCGC | 5 cut(s) | 5, 30, 136, 151, 301 |
| SspMI | CTAG | 1 cut(s) | 304 |
| StyI | CCWWGG | 1 cut(s) | 272 |
| TaaI | ACNGT | 3 cut(s) | 106, 128, 219 |
| TaiI | ACGT | 1 cut(s) | 120 |
| TaqI | TCGA | 1 cut(s) | 179 |
| TfiI | GAWTC | 1 cut(s) | 285 |
| Tru1I | TTAA | 1 cut(s) | 252 |
| Tru9I | TTAA | 1 cut(s) | 252 |
| TseFI | GTSAC | 1 cut(s) | 128 |
| TseI | GCWGC | 1 cut(s) | 232 |
| Tsp45I | GTSAC | 1 cut(s) | 128 |
| TspGWI | ACGGA | 2 cut(s) | 86, 297 |
| Tth111I | GACNNNGTC | 1 cut(s) | 260 |
| XspI | CTAG | 1 cut(s) | 304 |