Rh7CG250600
ERF Family

Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin Fzo YdjA family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
Physical Location & Seq
Forward (+)
23718147 .. 23724722
6576 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG250600.1

Sequence Viewer

Length: 1224 bp
ATGGCGATCGGTCATGGCGATCTTGAGATAATTCTCAACTTGGTCACATGGATTGTGACAAGGAGGCCTTTGGTGTTGCAGCTGCACAAGTTAGAACAGGGGATGCAGGACTATGCTGAGTTCCTCCACTTGGACAAGAAAATATTCACTGATTTTGCTGCAGTTCGGAAGGAAATTCAGGTTGAAACAGACAGGATGACTGGGAAATCAAACCGGATTTCTAATGTTCCTATTCATCTCAGCATATACTCCCCAAATGTTGTCAATTTAACATTGATAGATTTGCCTGGCTTAACTAAGGTTGCTGTAGACGGACAGCCAGAGAGTATTGTTCAAGACATAGAAAACATGGTTCGTTCTTATATAGCAAAGCCTAACTGCATGATTCTAGCAATAACTCCTGCAAATCAAGACGTAGCAACATCTGATGCTATCAAGATAGCAAGAGAAGTTGATCCTACAGGTGACAGGACATTTGGTGTGTTGACAAAGCTTGATTTAATGGATAGGGGAACTAATGCTTTGGATGTTCTTGAAGGAAGATCTTATAGGCTTAAACACCCTTGGGTTGGAATTGTGAACCGTTCACAAGCTGACATTAATACAAATATGGATATGGCTGCTGCAAGAAGGAGAGAGGGTGACTACTTTTCTGCTAGTATGGATTATGGACATTTGGTCAACAAAATGGGTTCAGAATATCTTGCAAAACTTCTCTCAAAGCATTTAGAGTCTGTAATTAAAGCTCGAATTCCAGCAATTGCCTCTATGATCAATAAAAGTATTGACGAACTTGAATCTGAATTGGATCATTTTGGTAAACCTGTTGCTATCGATGCAGGGGCCCAGTTATATACTATCTTAGAGCTGTGCCGGGCATTTGACCAGATATTCAAGGAACACTTGGATGGAGGACGACCTGGTGGTGATCGGATATATGCAGTATTTGATTACAAGCTTCCTGTTGATTTGAGAAGGCTCCCTTTTGACCGTCATCTTTCACTCCAAAATGTAAGGAAAGTGGTCTCACAGGCAGATGGTTACCAGCCTCATCTAATTGCACCTGAGCAAGGTTATCGGCGCCTCATTGAGAGTTCACTCAACTTTTTTAGAGGCCCAGCCCAATCTTCAGCAGATGAAGTACGTGTTCACCATTTAATATACCATATATTCTTGTTTCTGCAGCTATCAAAAGCGGGATTCATGTCGAATCTTAGTGGTTGA

Protein Analysis

407

Amino Acids

45.78

Weight (kDa)

6.54

Isoelectric Point (pI)

40.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Dynamin_N PF00350 18 - 165 3.5e-36 Dynamin family
Dynamin_M PF01031 173 - 382 1.7e-46 Dynamin central region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1080
AccI GTMKAC 1 cut(s) 309
AciI CCGC 1 cut(s) 1196
AclWI GGATC 2 cut(s) 449, 816
AcsI RAATTY 2 cut(s) 174, 750
AcuI CTGAAG 1 cut(s) 1113
AcyI GRCGYC 1 cut(s) 1081
AfaI GTAC 1 cut(s) 1143
AfiI CCNNNNNNNGG 3 cut(s) 130, 569, 1070
AflIII ACRYGT 1 cut(s) 1144
AgsI TTSAA 5 cut(s) 185, 335, 536, 797, 895
AhdI GACNNNNNGTC 1 cut(s) 677
AjnI CCWGG 2 cut(s) 286, 919
AluBI AGCT 7 cut(s) 82, 493, 593, 746, 868, 958, 1186
AluI AGCT 7 cut(s) 82, 493, 593, 746, 868, 958, 1186
Alw26I GTCTC 1 cut(s) 1030
AlwI GGATC 2 cut(s) 449, 816
AoxI GGCC 3 cut(s) 65, 843, 1114
ApaI GGGCCC 1 cut(s) 847
ApeKI GCWGC 6 cut(s) 79, 82, 158, 620, 623, 1183
ApoI RAATTY 2 cut(s) 174, 750
ArsI GACNNNNNNTTYG 2 cut(s) 458, 490
AseI ATTAAT 1 cut(s) 600
Asp700I GAANNNNTTC 1 cut(s) 143
AspLEI GCGC 1 cut(s) 1083
AspS9I GGNCC 3 cut(s) 843, 844, 1115
AsuC2I CCSGG 1 cut(s) 875
AsuHPI GGTGA 4 cut(s) 476, 653, 938, 1142
BaeGI GKGCMC 1 cut(s) 847
BanI GGYRCC 1 cut(s) 1080
BanII GRGCYC 1 cut(s) 847
BbvI GCAGC 6 cut(s) 69, 91, 145, 607, 610, 1195
BccI CCATC 2 cut(s) 902, 1031
BcgI CGANNNNNNTGC 2 cut(s) 1058, 1092
BciT130I CCWGG 2 cut(s) 288, 921
BclI TGATCA 1 cut(s) 771
BcnI CCSGG 1 cut(s) 875
BcoDI GTCTC 1 cut(s) 1030
BfaI CTAG 2 cut(s) 389, 657
BfmI CTRYAG 4 cut(s) 159, 306, 459, 1181
BfoI RGCGCY 1 cut(s) 1084
BglII AGATCT 1 cut(s) 542
BisI GCNGC 6 cut(s) 80, 83, 159, 621, 624, 1184
BlsI GCNGC 6 cut(s) 81, 84, 160, 622, 625, 1185
Bme1390I CCNGG 3 cut(s) 288, 875, 921
BmeRI GACNNNNNGTC 1 cut(s) 677
BmgT120I GGNCC 3 cut(s) 843, 844, 1115
BmiI GGNNCC 4 cut(s) 844, 845, 980, 1082
BmrFI CCNGG 3 cut(s) 288, 875, 921
BmrI ACTGGG 2 cut(s) 210, 841
BmsI GCATC 3 cut(s) 93, 418, 826
BmuI ACTGGG 2 cut(s) 210, 841
Bpu10I CCTNAGC 1 cut(s) 1065
BpuEI CTTGAG 1 cut(s) 44
BpuMI CCSGG 1 cut(s) 875
Bsa29I ATCGAT 1 cut(s) 834
BsaAI YACGTR 1 cut(s) 1145
BsaHI GRCGYC 1 cut(s) 1081
BsaI GGTCTC 1 cut(s) 1030
BsaJI CCNNGG 1 cut(s) 563
BsaWI WCCGGW 1 cut(s) 213
BsaXI ACNNNNNCTCC 2 cut(s) 625, 655
Bsc4I CCNNNNNNNGG 3 cut(s) 130, 569, 1070
Bse1I ACTGG 2 cut(s) 205, 847
BseBI CCWGG 2 cut(s) 288, 921
BseCI ATCGAT 1 cut(s) 834
BseDI CCNNGG 1 cut(s) 563
BseGI GGATG 4 cut(s) 108, 201, 532, 913
BseLI CCNNNNNNNGG 3 cut(s) 130, 569, 1070
BseMII CTCAG 3 cut(s) 108, 253, 1056
BseNI ACTGG 2 cut(s) 205, 847
BseSI GKGCMC 1 cut(s) 847
BseXI GCAGC 6 cut(s) 69, 91, 145, 607, 610, 1195
BseYI CCCAGC 1 cut(s) 1117
BsgI GTGCAG 1 cut(s) 68
Bsh1285I CGRYCG 1 cut(s) 9
BshFI GGCC 3 cut(s) 67, 845, 1116
BshNI GGYRCC 1 cut(s) 1080
BshVI ATCGAT 1 cut(s) 834
BsiEI CGRYCG 1 cut(s) 9
BsiSI CCGG 2 cut(s) 214, 874
BslI CCNNNNNNNGG 3 cut(s) 130, 569, 1070
BsmAI GTCTC 1 cut(s) 1030
BsnI GGCC 3 cut(s) 67, 845, 1116
Bso31I GGTCTC 1 cut(s) 1030
Bsp120I GGGCCC 1 cut(s) 843
Bsp1286I GDGCHC 1 cut(s) 847
Bsp143I GATC 7 cut(s) 6, 19, 454, 542, 771, 808, 928
BspACI CCGC 1 cut(s) 1196
BspANI GGCC 3 cut(s) 67, 845, 1116
BspCNI CTCAG 3 cut(s) 109, 252, 1057
BspDI ATCGAT 1 cut(s) 834
BspLI GGNNCC 4 cut(s) 844, 845, 980, 1082
BspMAI CTGCAG 2 cut(s) 163, 1185
BspPI GGATC 2 cut(s) 449, 816
BspT107I GGYRCC 1 cut(s) 1080
BspTNI GGTCTC 1 cut(s) 1030
BsrI ACTGG 2 cut(s) 205, 847
BssECI CCNNGG 1 cut(s) 563
BssMI GATC 7 cut(s) 6, 19, 454, 542, 771, 808, 928
BssNI GRCGYC 1 cut(s) 1081
BssT1I CCWWGG 1 cut(s) 563
Bst2UI CCWGG 2 cut(s) 288, 921
Bst4CI ACNGT 2 cut(s) 584, 992
BstACI GRCGYC 1 cut(s) 1081
BstBAI YACGTR 1 cut(s) 1145
BstDEI CTNAG 6 cut(s) 117, 239, 297, 862, 1065, 1214
BstEII GGTNACC 1 cut(s) 1040
BstENI CCTNNNNNAGG 1 cut(s) 1068
BstF5I GGATG 4 cut(s) 108, 201, 532, 913
BstH2I RGCGCY 1 cut(s) 1084
BstHHI GCGC 1 cut(s) 1083
BstKTI GATC 7 cut(s) 9, 22, 457, 545, 774, 811, 931
BstMAI GTCTC 1 cut(s) 1030
BstMBI GATC 7 cut(s) 6, 19, 454, 542, 771, 808, 928
BstMCI CGRYCG 1 cut(s) 9
BstMWI GCNNNNNNNGC 1 cut(s) 836
BstNI CCWGG 2 cut(s) 288, 921
BstPI GGTNACC 1 cut(s) 1040
BstSCI CCNGG 3 cut(s) 286, 873, 919
BstSFI CTRYAG 4 cut(s) 159, 306, 459, 1181
BstSLI GKGCMC 1 cut(s) 847
BstV1I GCAGC 6 cut(s) 69, 91, 145, 607, 610, 1195
BstX2I RGATCY 1 cut(s) 542
BstYI RGATCY 1 cut(s) 542
Bsu15I ATCGAT 1 cut(s) 834
BsuRI GGCC 3 cut(s) 67, 845, 1116
BsuTUI ATCGAT 1 cut(s) 834
BtsCI GGATG 4 cut(s) 108, 201, 532, 913
BtsIMutI CAGTG 1 cut(s) 147
CfoI GCGC 1 cut(s) 1083
Cfr13I GGNCC 3 cut(s) 843, 844, 1115
ClaI ATCGAT 1 cut(s) 834
CsiI ACCWGGT 1 cut(s) 919
Csp6I GTAC 1 cut(s) 1142
CviAII CATG 5 cut(s) 14, 48, 349, 382, 1204
CviQI GTAC 1 cut(s) 1142
DdeI CTNAG 6 cut(s) 117, 239, 297, 862, 1065, 1214
DinI GGCGCC 1 cut(s) 1082
DpnI GATC 7 cut(s) 8, 21, 456, 544, 773, 810, 930
DpnII GATC 7 cut(s) 6, 19, 454, 542, 771, 808, 928
DriI GACNNNNNGTC 1 cut(s) 677
Eam1105I GACNNNNNGTC 1 cut(s) 677
Eco130I CCWWGG 1 cut(s) 563
Eco147I AGGCCT 1 cut(s) 67
Eco24I GRGCYC 1 cut(s) 847
Eco31I GGTCTC 1 cut(s) 1030
Eco57I CTGAAG 1 cut(s) 1113
Eco91I GGTNACC 1 cut(s) 1040
EcoNI CCTNNNNNAGG 1 cut(s) 1068
EcoO109I RGGNCCY 1 cut(s) 843
EcoO65I GGTNACC 1 cut(s) 1040
EcoRI GAATTC 1 cut(s) 750
EcoRII CCWGG 2 cut(s) 286, 919
EcoT14I CCWWGG 1 cut(s) 563
EcoT38I GRGCYC 1 cut(s) 847
EgeI GGCGCC 1 cut(s) 1082
EheI GGCGCC 1 cut(s) 1082
ErhI CCWWGG 1 cut(s) 563
FaeI CATG 5 cut(s) 17, 51, 352, 385, 1207
FalI AAGNNNNNCTT 6 cut(s) 52, 84, 887, 919, 967, 999
FatI CATG 5 cut(s) 13, 47, 348, 381, 1203
FauI CCCGC 1 cut(s) 1189
FbaI TGATCA 1 cut(s) 771
FblI GTMKAC 1 cut(s) 309
Fnu4HI GCNGC 6 cut(s) 80, 83, 159, 621, 624, 1184
FokI GGATG 4 cut(s) 115, 208, 539, 920
FriOI GRGCYC 1 cut(s) 847
Fsp4HI GCNGC 6 cut(s) 80, 83, 159, 621, 624, 1184
FspBI CTAG 2 cut(s) 389, 657
GlaI GCGC 1 cut(s) 1082
GluI GCNGC 6 cut(s) 80, 83, 159, 621, 624, 1184
GsaI CCCAGC 1 cut(s) 1121
HaeII RGCGCY 1 cut(s) 1084
HaeIII GGCC 3 cut(s) 67, 845, 1116
HapII CCGG 2 cut(s) 214, 874
HhaI GCGC 1 cut(s) 1083
Hin1I GRCGYC 1 cut(s) 1081
Hin1II CATG 5 cut(s) 17, 51, 352, 385, 1207
Hin6I GCGC 1 cut(s) 1081
HinP1I GCGC 1 cut(s) 1081
HincII GTYRAC 2 cut(s) 486, 682
HindII GTYRAC 2 cut(s) 486, 682
HindIII AAGCTT 2 cut(s) 491, 956
HinfI GANTC 5 cut(s) 385, 731, 797, 1200, 1210
HpaII CCGG 2 cut(s) 214, 874
HphI GGTGA 4 cut(s) 476, 653, 938, 1142
Hpy166II GTNNAC 8 cut(s) 310, 486, 580, 587, 682, 821, 1097, 1150
Hpy188I TCNGA 5 cut(s) 168, 427, 697, 802, 933
Hpy188III TCNNGA 5 cut(s) 23, 335, 410, 436, 533
Hpy8I GTNNAC 8 cut(s) 310, 486, 580, 587, 682, 821, 1097, 1150
HpyAV CCTTC 4 cut(s) 163, 530, 624, 969
HpyCH4III ACNGT 2 cut(s) 584, 992
HpyCH4IV ACGT 2 cut(s) 414, 1144
HpyF10VI GCNNNNNNNGC 1 cut(s) 836
HpyF3I CTNAG 6 cut(s) 117, 239, 297, 862, 1065, 1214
HpySE526I ACGT 2 cut(s) 414, 1144
Hsp92I GRCGYC 1 cut(s) 1081
Hsp92II CATG 5 cut(s) 17, 51, 352, 385, 1207
HspAI GCGC 1 cut(s) 1081
KasI GGCGCC 1 cut(s) 1080
Ksp22I TGATCA 1 cut(s) 771
Kzo9I GATC 7 cut(s) 6, 19, 454, 542, 771, 808, 928
LmnI GCTCC 1 cut(s) 984
Lsp1109I GCAGC 6 cut(s) 69, 91, 145, 607, 610, 1195
LweI GCATC 3 cut(s) 93, 418, 826
MabI ACCWGGT 1 cut(s) 919
MaeI CTAG 2 cut(s) 389, 657
MaeII ACGT 2 cut(s) 414, 1144
MaeIII GTNAC 5 cut(s) 43, 55, 464, 641, 1040
MalI GATC 7 cut(s) 8, 21, 456, 544, 773, 810, 930
MboI GATC 7 cut(s) 6, 19, 454, 542, 771, 808, 928
MboII GAAGA 2 cut(s) 552, 1119
MfeI CAATTG 1 cut(s) 759
MflI RGATCY 1 cut(s) 542
MhlI GDGCHC 1 cut(s) 847
MluCI AATT 9 cut(s) 30, 174, 265, 573, 738, 750, 759, 803, 1056
Mly113I GGCGCC 1 cut(s) 1081
MlyI GAGTC 1 cut(s) 740
MmeI TCCRAC 1 cut(s) 550
MnlI CCTC 8 cut(s) 57, 134, 631, 775, 905, 1059, 1094, 1106
MroXI GAANNNNTTC 1 cut(s) 143
MseI TTAA 7 cut(s) 269, 293, 500, 555, 600, 741, 1157
MslI CAYNNNNRTG 1 cut(s) 906
MspA1I CMGCKG 1 cut(s) 82
MspI CCGG 2 cut(s) 214, 874
MspR9I CCNGG 3 cut(s) 288, 875, 921
MunI CAATTG 1 cut(s) 759
MvaI CCWGG 2 cut(s) 288, 921
MwoI GCNNNNNNNGC 1 cut(s) 836
NarI GGCGCC 1 cut(s) 1081
NciI CCSGG 1 cut(s) 875
NdeII GATC 7 cut(s) 6, 19, 454, 542, 771, 808, 928
NlaIII CATG 5 cut(s) 17, 51, 352, 385, 1207
NlaIV GGNNCC 4 cut(s) 844, 845, 980, 1082
NmuCI GTSAC 4 cut(s) 43, 55, 464, 641
PceI AGGCCT 1 cut(s) 67
PcsI WCGNNNNNNNCGW 1 cut(s) 15
PdmI GAANNNNTTC 1 cut(s) 143
PfeI GAWTC 4 cut(s) 385, 797, 1200, 1210
PkrI GCNGC 6 cut(s) 81, 84, 160, 622, 625, 1185
Ple19I CGATCG 1 cut(s) 9
PleI GAGTC 1 cut(s) 739
PluTI GGCGCC 1 cut(s) 1084
PpsI GAGTC 1 cut(s) 739
Ppu21I YACGTR 1 cut(s) 1145
PshBI ATTAAT 1 cut(s) 600
Psp6I CCWGG 2 cut(s) 286, 919
PspEI GGTNACC 1 cut(s) 1040
PspFI CCCAGC 1 cut(s) 1117
PspGI CCWGG 2 cut(s) 286, 919
PspN4I GGNNCC 4 cut(s) 844, 845, 980, 1082
PspOMI GGGCCC 1 cut(s) 843
PspPI GGNCC 3 cut(s) 843, 844, 1115
PstI CTGCAG 2 cut(s) 163, 1185
PsuI RGATCY 1 cut(s) 542
PvuI CGATCG 1 cut(s) 9
PvuII CAGCTG 1 cut(s) 82
RsaI GTAC 1 cut(s) 1143
RsaNI GTAC 1 cut(s) 1142
RseI CAYNNNNRTG 1 cut(s) 906
SaqAI TTAA 7 cut(s) 269, 293, 500, 555, 600, 741, 1157
SatI GCNGC 6 cut(s) 80, 83, 159, 621, 624, 1184
Sau3AI GATC 7 cut(s) 6, 19, 454, 542, 771, 808, 928
Sau96I GGNCC 3 cut(s) 843, 844, 1115
SchI GAGTC 1 cut(s) 740
ScrFI CCNGG 3 cut(s) 288, 875, 921
SduI GDGCHC 1 cut(s) 847
SexAI ACCWGGT 1 cut(s) 919
SfaNI GCATC 3 cut(s) 93, 418, 826
SfcI CTRYAG 4 cut(s) 159, 306, 459, 1181
SfoI GGCGCC 1 cut(s) 1082
SmiMI CAYNNNNRTG 1 cut(s) 906
SmlI CTYRAG 1 cut(s) 23
SmoI CTYRAG 1 cut(s) 23
Sse9I AATT 9 cut(s) 30, 174, 265, 573, 738, 750, 759, 803, 1056
SseBI AGGCCT 1 cut(s) 67
SsiI CCGC 1 cut(s) 1196
SspDI GGCGCC 1 cut(s) 1080
SspI AATATT 1 cut(s) 144
SspMI CTAG 2 cut(s) 389, 657
StuI AGGCCT 1 cut(s) 67
StyD4I CCNGG 3 cut(s) 286, 873, 919
StyI CCWWGG 1 cut(s) 563
TaaI ACNGT 2 cut(s) 584, 992
TaiI ACGT 2 cut(s) 417, 1147
TaqI TCGA 3 cut(s) 748, 834, 1208
TasI AATT 9 cut(s) 30, 174, 265, 573, 738, 750, 759, 803, 1056
TfiI GAWTC 4 cut(s) 385, 797, 1200, 1210
Tru1I TTAA 7 cut(s) 269, 293, 500, 555, 600, 741, 1157
Tru9I TTAA 7 cut(s) 269, 293, 500, 555, 600, 741, 1157
TscAI CASTG 1 cut(s) 154
TseFI GTSAC 4 cut(s) 43, 55, 464, 641
TseI GCWGC 6 cut(s) 79, 82, 158, 620, 623, 1183
Tsp45I GTSAC 4 cut(s) 43, 55, 464, 641
TspDTI ATGAA 3 cut(s) 224, 1152, 1192
TspGWI ACGGA 1 cut(s) 327
TspRI CASTG 1 cut(s) 154
VspI ATTAAT 1 cut(s) 600
XagI CCTNNNNNAGG 1 cut(s) 1068
XapI RAATTY 2 cut(s) 174, 750
XmiI GTMKAC 1 cut(s) 309
XmnI GAANNNNTTC 1 cut(s) 143
XspI CTAG 2 cut(s) 389, 657
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.