Rmu_sc0000888.1_g000002

Eukaryotic peptide chain release factor GTP-binding

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000888.1
Physical Location & Seq
Forward (+)
8282 .. 14359
6078 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000888.1_g000002.1.cds

Sequence Viewer

Length: 1554 bp
atggatattgaggaggaaatccggtcgctgcagctggattcagcagaagataatggggatgtaaatccggaagctggaaatctggatgtcgagaattctgatgataagatggaggaagttgatgataagatggaggaaggtgatgataatatggaggaaggttccagggatgccgttgagccagtgcaaaaagtgaaggagaagaaggacgaacttgacgaggtggaagtgaataagaagaggcacttgaatgttgtttttattggccatgtggatgctggaaagtcaacaacaggaggtcaaatccttttccttagtggtcaggttgatgatcgtacaattcaaaaatatgaaaaagaagcgaaagacaaaagtagggagagctggtatatggcatttatcatggataccaatgaagaagagagggctaagggtaaaactattgaagttggacgagcacattttgaaactgagacaactcgatttacgatcttggatgcaccaggtcacaaaagttatgtaccaaatatgatcagtggtgcatctcaggctgatataggagtgctggtaatatctgcccggaaaggagaatttgaaacagggtatgaaagaggtggacagacccgtgaacatgttcagcttgcaaaaactttgggagtgtctaaactgcttgttgttgtgaataaaatggatgatcttactgtgaactggtcgaaagaaaggtatgatgaaattgagtcgaagatggtaccattccttaagacatcaggctacaacgtgaagaaagatgtgcagttcataccaatatctggtcttcttggtacaaacatgaaaactaggttgagtaaagaaacttgttcatggtgggatggcccctgcctttttgaagcccttgactctattgaagttcctctacgagaccctaaaggtccattcaggttgcccatcatagataaattcaaggacatgggaactactgttatggggaaagtggaatctggttcagtgcatgaaggggattcactgattatcatgccaaataaggctcaagtgaaagttattgctattttcattgatgaagatagggtcaaatatgctggacctggtgaaaatcttcgagttaggttatcaggtatcgacgacgaggacatactgtcaggttttgtcttgtcgagtgtggcaaatccaatacctgctgttaccgagttttatgcgcagttgcagatccttgagttgctggaaaatgcaatctttacacctggatacaaagctgtcctgcatattcactctgttgttgaggaatgtgagattgttgatctgctagaggaaattgatatgaagactaagaaacctaagaagaagaagcctctttttgtgaagaatggtgctgttattaaatgccggattcaggtgactagcctgatatgcatggagaagttcgccgattttccccaacttggaaggtttactcttcgtactgaaggtaaaactattgctgtgggaaaagtaattgatgctccatccaagaaaagtaaacgatcttcgacaaactaa

Protein Analysis

517

Amino Acids

57.83

Weight (kDa)

5.13

Isoelectric Point (pI)

38.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1215
Acc36I ACCTGC 1 cut(s) 1201
Acc65I GGTACC 1 cut(s) 748
AccB1I GGYRCC 1 cut(s) 748
AccB7I CCANNNNNTGG 1 cut(s) 809
AccIII TCCGGA 1 cut(s) 67
AclWI GGATC 1 cut(s) 1219
AcoI YGGCCR 1 cut(s) 265
AcsI RAATTY 3 cut(s) 94, 590, 956
AcuI CTGAAG 1 cut(s) 1500
AfaI GTAC 5 cut(s) 337, 522, 750, 823, 1477
AfiI CCNNNNNNNGG 4 cut(s) 74, 809, 1408, 1457
AflII CTTAAG 1 cut(s) 758
AflIII ACRYGT 1 cut(s) 631
AgsI TTSAA 8 cut(s) 250, 344, 446, 467, 596, 887, 905, 961
AhdI GACNNNNNGTC 1 cut(s) 1153
AjnI CCWGG 4 cut(s) 164, 502, 1102, 1258
AluBI AGCT 5 cut(s) 34, 74, 384, 640, 1271
AluI AGCT 5 cut(s) 34, 74, 384, 640, 1271
Alw21I GWGCWC 1 cut(s) 460
Alw26I GTCTC 2 cut(s) 467, 912
AlwI GGATC 1 cut(s) 1219
Aor13HI TCCGGA 1 cut(s) 67
AoxI GGCC 2 cut(s) 265, 871
ApeKI GCWGC 2 cut(s) 28, 31
ApoI RAATTY 3 cut(s) 94, 590, 956
Asp700I GAANNNNTTC 2 cut(s) 633, 1113
Asp718I GGTACC 1 cut(s) 748
AspLEI GCGC 1 cut(s) 1216
AspS9I GGNCC 3 cut(s) 872, 929, 1100
AsuC2I CCSGG 1 cut(s) 580
AsuHPI GGTGA 3 cut(s) 152, 1118, 1423
AvaII GGWCC 2 cut(s) 929, 1100
BalI TGGCCA 1 cut(s) 267
BanI GGYRCC 1 cut(s) 748
BarI GAAGNNNNNNTAC 3 cut(s) 897, 929, 1525
BbsI GAAGAC 2 cut(s) 806, 1346
Bbv12I GWGCWC 1 cut(s) 460
BbvI GCAGC 2 cut(s) 15, 43
BccI CCATC 6 cut(s) 103, 124, 739, 863, 953, 1528
BceAI ACGGC 1 cut(s) 158
BcgI CGANNNNNNTGC 2 cut(s) 1193, 1227
BciT130I CCWGG 4 cut(s) 166, 504, 1104, 1260
BciVI GTATCC 2 cut(s) 400, 1256
BclI TGATCA 1 cut(s) 531
BcnI CCSGG 1 cut(s) 580
BcoDI GTCTC 2 cut(s) 467, 912
BfaI CTAG 3 cut(s) 837, 1322, 1416
BfmI CTRYAG 1 cut(s) 29
BfrI CTTAAG 1 cut(s) 758
BfuAI ACCTGC 1 cut(s) 1201
BfuI GTATCC 2 cut(s) 400, 1256
BisI GCNGC 2 cut(s) 29, 32
BlsI GCNGC 2 cut(s) 30, 33
Bme1390I CCNGG 5 cut(s) 166, 504, 580, 1104, 1260
Bme18I GGWCC 2 cut(s) 929, 1100
BmeRI GACNNNNNGTC 1 cut(s) 1153
BmgT120I GGNCC 3 cut(s) 872, 929, 1100
BmiI GGNNCC 3 cut(s) 163, 750, 874
BmrFI CCNGG 5 cut(s) 166, 504, 580, 1104, 1260
BmsI GCATC 5 cut(s) 160, 265, 487, 551, 1504
BpiI GAAGAC 2 cut(s) 806, 1346
Bpu10I CCTNAGC 1 cut(s) 429
BpuEI CTTGAG 2 cut(s) 1032, 1250
BpuMI CCSGG 1 cut(s) 580
BsaBI GATNNNNATC 1 cut(s) 63
BsaI GGTCTC 1 cut(s) 912
BsaJI CCNNGG 1 cut(s) 165
BsaWI WCCGGW 2 cut(s) 21, 67
BsaXI ACNNNNNCTCC 4 cut(s) 371, 401, 552, 582
Bsc4I CCNNNNNNNGG 4 cut(s) 74, 809, 1408, 1457
Bse1I ACTGG 2 cut(s) 182, 713
Bse8I GATNNNNATC 1 cut(s) 63
BseAI TCCGGA 1 cut(s) 67
BseBI CCWGG 4 cut(s) 166, 504, 1104, 1260
BseDI CCNNGG 1 cut(s) 165
BseGI GGATG 8 cut(s) 64, 91, 175, 280, 502, 697, 874, 1520
BseJI GATNNNNATC 1 cut(s) 63
BseLI CCNNNNNNNGG 4 cut(s) 74, 809, 1408, 1457
BseMII CTCAG 2 cut(s) 462, 560
BseNI ACTGG 2 cut(s) 182, 713
BseRI GAGGAG 1 cut(s) 26
BseXI GCAGC 2 cut(s) 15, 43
BsgI GTGCAG 1 cut(s) 812
Bsh1285I CGRYCG 1 cut(s) 26
BshFI GGCC 2 cut(s) 267, 873
BshNI GGYRCC 1 cut(s) 748
BsiEI CGRYCG 1 cut(s) 26
BsiHKAI GWGCWC 1 cut(s) 460
BsiSI CCGG 4 cut(s) 22, 68, 580, 1402
BslI CCNNNNNNNGG 4 cut(s) 74, 809, 1408, 1457
BsmAI GTCTC 2 cut(s) 467, 912
BsnI GGCC 2 cut(s) 267, 873
Bso31I GGTCTC 1 cut(s) 912
Bsp1286I GDGCHC 1 cut(s) 460
Bsp13I TCCGGA 1 cut(s) 67
Bsp143I GATC 7 cut(s) 331, 489, 531, 694, 1224, 1315, 1538
BspANI GGCC 2 cut(s) 267, 873
BspCNI CTCAG 2 cut(s) 463, 559
BspEI TCCGGA 1 cut(s) 67
BspLI GGNNCC 3 cut(s) 163, 750, 874
BspMAI CTGCAG 1 cut(s) 33
BspMI ACCTGC 1 cut(s) 1201
BspPI GGATC 1 cut(s) 1219
BspT107I GGYRCC 1 cut(s) 748
BspTI CTTAAG 1 cut(s) 758
BspTNI GGTCTC 1 cut(s) 912
BsrI ACTGG 2 cut(s) 182, 713
BssECI CCNNGG 1 cut(s) 165
BssMI GATC 7 cut(s) 331, 489, 531, 694, 1224, 1315, 1538
Bst2UI CCWGG 4 cut(s) 166, 504, 1104, 1260
Bst4CI ACNGT 3 cut(s) 703, 979, 1155
Bst6I CTCTTC 3 cut(s) 233, 414, 1476
BstAFI CTTAAG 1 cut(s) 758
BstC8I GCNNGC 1 cut(s) 642
BstDEI CTNAG 6 cut(s) 314, 429, 471, 546, 1344, 1353
BstF5I GGATG 8 cut(s) 64, 91, 175, 280, 502, 697, 874, 1520
BstHHI GCGC 1 cut(s) 1216
BstKTI GATC 7 cut(s) 334, 492, 534, 697, 1227, 1318, 1541
BstMAI GTCTC 2 cut(s) 467, 912
BstMBI GATC 7 cut(s) 331, 489, 531, 694, 1224, 1315, 1538
BstMCI CGRYCG 1 cut(s) 26
BstMWI GCNNNNNNNGC 2 cut(s) 548, 1425
BstNI CCWGG 4 cut(s) 166, 504, 1104, 1260
BstNSI RCATGY 1 cut(s) 635
BstSCI CCNGG 5 cut(s) 164, 502, 578, 1102, 1258
BstSFI CTRYAG 1 cut(s) 29
BstV1I GCAGC 2 cut(s) 15, 43
BstV2I GAAGAC 2 cut(s) 806, 1346
BstX2I RGATCY 1 cut(s) 1224
BstYI RGATCY 1 cut(s) 1224
BsuI GTATCC 2 cut(s) 400, 1256
BsuRI GGCC 2 cut(s) 267, 873
BtsCI GGATG 8 cut(s) 64, 91, 175, 280, 502, 697, 874, 1520
BtsIMutI CAGTG 4 cut(s) 189, 541, 1011, 1022
BveI ACCTGC 1 cut(s) 1201
Cac8I GCNNGC 1 cut(s) 642
CfoI GCGC 1 cut(s) 1216
Cfr13I GGNCC 3 cut(s) 872, 929, 1100
CsiI ACCWGGT 2 cut(s) 502, 1102
Csp6I GTAC 5 cut(s) 336, 521, 749, 822, 1476
CviAII CATG 9 cut(s) 269, 403, 632, 829, 861, 967, 1010, 1033, 1429
CviQI GTAC 5 cut(s) 336, 521, 749, 822, 1476
DdeI CTNAG 6 cut(s) 314, 429, 471, 546, 1344, 1353
DpnI GATC 7 cut(s) 333, 491, 533, 696, 1226, 1317, 1540
DpnII GATC 7 cut(s) 331, 489, 531, 694, 1224, 1315, 1538
DriI GACNNNNNGTC 1 cut(s) 1153
EaeI YGGCCR 1 cut(s) 265
Eam1104I CTCTTC 3 cut(s) 233, 414, 1476
Eam1105I GACNNNNNGTC 1 cut(s) 1153
EarI CTCTTC 3 cut(s) 233, 414, 1476
Eco31I GGTCTC 1 cut(s) 912
Eco47I GGWCC 2 cut(s) 929, 1100
Eco57I CTGAAG 1 cut(s) 1500
EcoRI GAATTC 1 cut(s) 94
EcoRII CCWGG 4 cut(s) 164, 502, 1102, 1258
EcoT22I ATGCAT 1 cut(s) 1430
FaeI CATG 9 cut(s) 272, 406, 635, 832, 864, 970, 1013, 1036, 1432
FalI AAGNNNNNCTT 2 cut(s) 230, 262
FatI CATG 9 cut(s) 268, 402, 631, 828, 860, 966, 1009, 1032, 1428
FbaI TGATCA 1 cut(s) 531
Fnu4HI GCNGC 2 cut(s) 29, 32
FokI GGATG 8 cut(s) 71, 98, 182, 287, 509, 704, 881, 1507
Fsp4HI GCNGC 2 cut(s) 29, 32
FspBI CTAG 3 cut(s) 837, 1322, 1416
FspI TGCGCA 1 cut(s) 1215
GlaI GCGC 1 cut(s) 1215
GluI GCNGC 2 cut(s) 29, 32
HaeIII GGCC 2 cut(s) 267, 873
HapII CCGG 4 cut(s) 22, 68, 580, 1402
HhaI GCGC 1 cut(s) 1216
Hin1II CATG 9 cut(s) 272, 406, 635, 832, 864, 970, 1013, 1036, 1432
Hin6I GCGC 1 cut(s) 1214
HinP1I GCGC 1 cut(s) 1214
HincII GTYRAC 1 cut(s) 288
HindII GTYRAC 1 cut(s) 288
HinfI GANTC 6 cut(s) 38, 737, 896, 995, 1019, 1405
HpaII CCGG 4 cut(s) 22, 68, 580, 1402
HphI GGTGA 3 cut(s) 152, 1118, 1423
Hpy166II GTNNAC 6 cut(s) 288, 617, 629, 706, 1467, 1535
Hpy188I TCNGA 1 cut(s) 100
Hpy188III TCNNGA 3 cut(s) 68, 83, 91
Hpy8I GTNNAC 6 cut(s) 288, 617, 629, 706, 1467, 1535
Hpy99I CGWCG 2 cut(s) 1142, 1145
HpyAV CCTTC 7 cut(s) 131, 152, 190, 199, 1007, 1455, 1475
HpyCH4III ACNGT 3 cut(s) 703, 979, 1155
HpyCH4IV ACGT 1 cut(s) 777
HpyF10VI GCNNNNNNNGC 2 cut(s) 548, 1425
HpyF3I CTNAG 6 cut(s) 314, 429, 471, 546, 1344, 1353
HpySE526I ACGT 1 cut(s) 777
Hsp92II CATG 9 cut(s) 272, 406, 635, 832, 864, 970, 1013, 1036, 1432
HspAI GCGC 1 cut(s) 1214
Kpn2I TCCGGA 1 cut(s) 67
KpnI GGTACC 1 cut(s) 752
Ksp22I TGATCA 1 cut(s) 531
Kzo9I GATC 7 cut(s) 331, 489, 531, 694, 1224, 1315, 1538
LmnI GCTCC 1 cut(s) 1522
Lsp1109I GCAGC 2 cut(s) 15, 43
LweI GCATC 5 cut(s) 160, 265, 487, 551, 1504
MabI ACCWGGT 2 cut(s) 502, 1102
MaeI CTAG 3 cut(s) 837, 1322, 1416
MaeII ACGT 1 cut(s) 777
MaeIII GTNAC 3 cut(s) 506, 1198, 1411
MalI GATC 7 cut(s) 333, 491, 533, 696, 1226, 1317, 1540
MboI GATC 7 cut(s) 331, 489, 531, 694, 1224, 1315, 1538
MflI RGATCY 1 cut(s) 1224
MhlI GDGCHC 1 cut(s) 460
MlsI TGGCCA 1 cut(s) 267
MluCI AATT 7 cut(s) 94, 339, 590, 732, 956, 1329, 1509
MluNI TGGCCA 1 cut(s) 267
MlyI GAGTC 2 cut(s) 746, 890
MmeI TCCRAC 1 cut(s) 430
Mox20I TGGCCA 1 cut(s) 267
Mph1103I ATGCAT 1 cut(s) 1430
MroI TCCGGA 1 cut(s) 67
MroXI GAANNNNTTC 2 cut(s) 633, 1113
MscI TGGCCA 1 cut(s) 267
MseI TTAA 2 cut(s) 759, 1395
MslI CAYNNNNRTG 2 cut(s) 249, 273
Msp20I TGGCCA 1 cut(s) 267
MspA1I CMGCKG 1 cut(s) 34
MspCI CTTAAG 1 cut(s) 758
MspI CCGG 4 cut(s) 22, 68, 580, 1402
MspR9I CCNGG 5 cut(s) 166, 504, 580, 1104, 1260
MvaI CCWGG 4 cut(s) 166, 504, 1104, 1260
MwoI GCNNNNNNNGC 2 cut(s) 548, 1425
NciI CCSGG 1 cut(s) 580
NdeII GATC 7 cut(s) 331, 489, 531, 694, 1224, 1315, 1538
NlaIII CATG 9 cut(s) 272, 406, 635, 832, 864, 970, 1013, 1036, 1432
NlaIV GGNNCC 3 cut(s) 163, 750, 874
NmuCI GTSAC 2 cut(s) 506, 1411
NsbI TGCGCA 1 cut(s) 1215
NsiI ATGCAT 1 cut(s) 1430
NspI RCATGY 1 cut(s) 635
PciI ACATGT 1 cut(s) 631
PcsI WCGNNNNNNNCGW 1 cut(s) 216
PdmI GAANNNNTTC 2 cut(s) 633, 1113
PfeI GAWTC 4 cut(s) 38, 995, 1019, 1405
PflMI CCANNNNNTGG 1 cut(s) 809
PkrI GCNGC 2 cut(s) 30, 33
PleI GAGTC 2 cut(s) 745, 890
PpsI GAGTC 2 cut(s) 745, 890
PscI ACATGT 1 cut(s) 631
Psp6I CCWGG 4 cut(s) 164, 502, 1102, 1258
PspGI CCWGG 4 cut(s) 164, 502, 1102, 1258
PspN4I GGNNCC 3 cut(s) 163, 750, 874
PspPI GGNCC 3 cut(s) 872, 929, 1100
PstI CTGCAG 1 cut(s) 33
PsuI RGATCY 1 cut(s) 1224
PvuII CAGCTG 1 cut(s) 34
RsaI GTAC 5 cut(s) 337, 522, 750, 823, 1477
RsaNI GTAC 5 cut(s) 336, 521, 749, 822, 1476
RseI CAYNNNNRTG 2 cut(s) 249, 273
SaqAI TTAA 2 cut(s) 759, 1395
SatI GCNGC 2 cut(s) 29, 32
Sau3AI GATC 7 cut(s) 331, 489, 531, 694, 1224, 1315, 1538
Sau96I GGNCC 3 cut(s) 872, 929, 1100
SchI GAGTC 2 cut(s) 746, 890
ScrFI CCNGG 5 cut(s) 166, 504, 580, 1104, 1260
SduI GDGCHC 1 cut(s) 460
SexAI ACCWGGT 2 cut(s) 502, 1102
SfaNI GCATC 5 cut(s) 160, 265, 487, 551, 1504
SfcI CTRYAG 1 cut(s) 29
SinI GGWCC 2 cut(s) 929, 1100
SmiMI CAYNNNNRTG 2 cut(s) 249, 273
SmlI CTYRAG 3 cut(s) 758, 1047, 1229
SmoI CTYRAG 3 cut(s) 758, 1047, 1229
Sse9I AATT 7 cut(s) 94, 339, 590, 732, 956, 1329, 1509
SspMI CTAG 3 cut(s) 837, 1322, 1416
StyD4I CCNGG 5 cut(s) 164, 502, 578, 1102, 1258
TaaI ACNGT 3 cut(s) 703, 979, 1155
TaiI ACGT 1 cut(s) 780
TaqI TCGA 8 cut(s) 90, 481, 713, 740, 1117, 1137, 1172, 1544
TasI AATT 7 cut(s) 94, 339, 590, 732, 956, 1329, 1509
TfiI GAWTC 4 cut(s) 38, 995, 1019, 1405
Tru1I TTAA 2 cut(s) 759, 1395
Tru9I TTAA 2 cut(s) 759, 1395
TscAI CASTG 4 cut(s) 189, 541, 1011, 1029
TseFI GTSAC 2 cut(s) 506, 1411
TseI GCWGC 2 cut(s) 28, 31
Tsp45I GTSAC 2 cut(s) 506, 1411
TspRI CASTG 4 cut(s) 189, 541, 1011, 1029
Van91I CCANNNNNTGG 1 cut(s) 809
Vha464I CTTAAG 1 cut(s) 758
VpaK11BI GGWCC 2 cut(s) 929, 1100
XapI RAATTY 3 cut(s) 94, 590, 956
XceI RCATGY 1 cut(s) 635
XcmI CCANNNNNNNNNTGG 1 cut(s) 275
XmnI GAANNNNTTC 2 cut(s) 633, 1113
XspI CTAG 3 cut(s) 837, 1322, 1416
Zsp2I ATGCAT 1 cut(s) 1430
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.