Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0004512

Physical Location & Seq

Genomic Coordinates Reverse (-)

55897315 .. 55901623

Gene Structure 4309 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0420500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1299 bp

ATGGTCCAACAAAACCCACACTCGTCTATTGTACTAGTACTAAGATCTCTGTACGTGCATGTTCGTTGCGTCCAAAATAAAGCCAAATCACAGCTTACGTTCGCTCGATCACAGACTCCCAAATCCCAACATCGCTGCCTCAAGATTTTGCTTCATTCCTTTCTACAATTTCTTGAAGATCGTACCGCCGGTGTTTTTATAAAGAAGAAGATCAAGATTATTGAAGAACAAGAAGAAAAGGAGCGCAAGATGGCTACAAAGCTTGTTTTGATTACATTCGCGATATGTAGGCTGCTTATTACGGTGGGGCTGACCATGGACCCGGCGGAGCTGCTCCGTCTAGTGGTGGACGGACAGCTCAGCGTGGATCCGTCCGACGTGGAGACGGCGTCCAAGGACTTTGGTCTCATGAGCCGAGCGGAGCCCTTGGCCGTTATGCACCCGGCTTCGGCAGAAGACGTAGCGCGGCTCGTGCGGGCTGCGTACTCTACCGCCAACGGCCTCAGCGTCTCGGCTCGTGGGCATGGCCACTCCATCAACGGCCAGGCCCAGGCGAGAAATGGGGTGGTGGTTCAAATGAGCGGAGGGAAACGGGTTGGGTCGGGGAAGCCGGCCGCCGGCCGGAGTGAGACGGTGGGTCGGGTTGTTTCGGAGAAGGGTTTGTACATGGACGCGTGGGGAGGGGAGCTGTGGATAGAGGTGTTGAGGGCGACGTTGGAGTATGGACTCGCCCCCAAGTCGTGGACAGACTATTTGTACTTGTCAGTAGGCGGTACACTCTCCAACGCCGGAATCAGTGGCCAAGCTTTCAACCATGGACCTCAGATTAGTAATGTTCTTGAGCTTGACGTTGTTACAGGCAAAGGCGAGCTCTTGACATGTTCAGAAGAGAGAAACTCAGAGCTGTTCCACGCTGTTCTTGGTGGGCTTGGCCAGTTTGGAATCATCACTAGGGCTAGAATTGCCCTTGAACCAGCCCCCAAAAGGGTGAGGTGGATCCGAGTACTGTATTCAAAATTTTCGGCCTTTACCAAAGACCAGGAATATCTGATCTCTCTGCACGGGCAACCCAGCAGCCAGAAATTCGATTACGTTGAGGGTTTCGTTATTGTCGACGAAGGCCTCATCAACAACTGGAGGTCATCTTTCTTCTCCCCAAGCAACCCTGTCAAGATCTCCTCCATTGATTCTAATGGGAATGGAGGTGTTTTATATTGCTTGGAGATAACCAAAAACTACGATGATTCAACCGCTGATACTATTGACCAGGTATATATACATGCATGTTTATTTGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002181 GO:0002184 GO:0003674 GO:0003676 GO:0003723 GO:0003747 GO:0003824 GO:0003924 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006412 GO:0006415 GO:0006464 GO:0006479 GO:0006518 GO:0006807 GO:0008079 GO:0008135 GO:0008150 GO:0008152 GO:0008213 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017111 GO:0018444 GO:0019538 GO:0022411 GO:0032259 GO:0032984 GO:0032991 GO:0034641 GO:0034645 GO:0036211 GO:0043043 GO:0043170 GO:0043412 GO:0043414 GO:0043603 GO:0043604 GO:0043624 GO:0043933 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0071704 GO:0071840 GO:0097159 GO:1901363 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko03015 map03015

Pfam Domains

Protein Families

GTP_EFTU GTP_EFTU_D2 GTP_EFTU_D3

Protein Analysis

432

Amino Acids

47.4

Weight (kDa)

8.6

Isoelectric Point (pI)

41.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAD_binding_4	PF01565	142 - 295	8.4e-18	FAD binding domain
Cytokin-bind	PF09265	327 - 424	2.5e-31	Cytokinin dehydrogenase 1, FAD and cytokinin binding

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004512)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18070 AT1G18070 AT1G18070
fragaria_vesca	FvH4_5g17000 FvH4_5g17000 FvH4_5g17000 FvH4_5g17000 FvH4_5g17000 FvH4_5g17000
malus_domestica	MD06G1224200.v1.1 MD14G1233200.v1.1
prunus_persica	Prupe.5G229200_v2.0.a1 Prupe.5G229200_v2.0.a1 Prupe.5G229200_v2.0.a1 Prupe.5G229200_v2.0.a1 Prupe.5G229200_v2.0.a1
pyrus_communis	pycom06g19950
rosa_chinensis	RchiOBHm_Chr7g0178871
rosa_laevigata	RLG00000005398
rosa_multiflora	Rmu_sc0000888.1_g000002
rosa_roxburghii	Rroxscaffold_3G00274490
rosa_rugosa	Rorug06G0420300 Rorug06G0420300 Rorug06G0420400 Rorug06G0420500 Rorug06G0420500 Rorug06G0420500
rosa_samantha	Rh7AG019800 Rh7BG019300 Rh7CG019900 Rh7DG019800
rosa_wichuraiana	Rw7G001600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	200
AccB7I	CCANNNNNTGG	1 cut(s)	741
AccBSI	CCGCTC	2 cut(s)	419, 582
AccI	GTMKAC	1 cut(s)	1113
AccII	CGCG	3 cut(s)	281, 466, 674
AclWI	GGATC	4 cut(s)	362, 375, 991, 1004
AcoI	YGGCCR	7 cut(s)	429, 526, 541, 612, 619, 799, 931
AcsI	RAATTY	2 cut(s)	1016, 1082
AcyI	GRCGYC	1 cut(s)	389
AfaI	GTAC	9 cut(s)	33, 39, 53, 184, 485, 665, 758, 775, 1005
AfiI	CCNNNNNNNGG	8 cut(s)	343, 448, 550, 617, 621, 741, 984, 985
AflIII	ACRYGT	2 cut(s)	672, 878
AgsI	TTSAA	7 cut(s)	176, 224, 575, 811, 971, 1014, 1248
AhdI	GACNNNNNGTC	1 cut(s)	636
AhlI	ACTAGT	1 cut(s)	34
AjiI	CACGTC	1 cut(s)	379
AjnI	CCWGG	4 cut(s)	543, 549, 1038, 1266
AluBI	AGCT	9 cut(s)	94, 262, 331, 358, 688, 806, 844, 871, 904
AluI	AGCT	9 cut(s)	94, 262, 331, 358, 688, 806, 844, 871, 904
Alw21I	GWGCWC	1 cut(s)	873
Alw26I	GTCTC	4 cut(s)	377, 410, 514, 623
AlwI	GGATC	4 cut(s)	362, 375, 991, 1004
ApeKI	GCWGC	5 cut(s)	135, 292, 331, 479, 1074
ApoI	RAATTY	2 cut(s)	1016, 1082
ArsI	GACNNNNNNTTYG	2 cut(s)	736, 768
AspLEI	GCGC	2 cut(s)	246, 466
AspS9I	GGNCC	4 cut(s)	4, 319, 547, 818
AsuC2I	CCSGG	2 cut(s)	323, 443
AsuHPI	GGTGA	1 cut(s)	1000
AvaII	GGWCC	3 cut(s)	4, 319, 818
BalI	TGGCCA	3 cut(s)	528, 801, 933
BamHI	GGATCC	2 cut(s)	367, 996
BanII	GRGCYC	2 cut(s)	426, 873
BarI	GAAGNNNNNNTAC	2 cut(s)	647, 679
BauI	CACGAG	2 cut(s)	470, 516
BbsI	GAAGAC	1 cut(s)	462
Bbv12I	GWGCWC	1 cut(s)	873
BbvCI	CCTCAGC	1 cut(s)	503
BbvI	GCAGC	5 cut(s)	122, 279, 318, 466, 1086
BccI	CCATC	2 cut(s)	244, 542
BceAI	ACGGC	4 cut(s)	402, 416, 514, 556
BciT130I	CCWGG	4 cut(s)	545, 551, 1040, 1268
BcnI	CCSGG	2 cut(s)	323, 443
BcoDI	GTCTC	4 cut(s)	377, 410, 514, 623
BcuI	ACTAGT	1 cut(s)	34
BfaI	CTAG	4 cut(s)	35, 341, 951, 957
BglII	AGATCT	2 cut(s)	44, 1173
BisI	GCNGC	7 cut(s)	136, 293, 332, 467, 480, 615, 1075
BlpI	GCTNAGC	1 cut(s)	359
BlsI	GCNGC	7 cut(s)	137, 294, 333, 468, 481, 616, 1076
BmcAI	AGTACT	2 cut(s)	39, 1005
Bme1390I	CCNGG	6 cut(s)	323, 443, 545, 551, 1040, 1268
Bme18I	GGWCC	3 cut(s)	4, 319, 818
BmeRI	GACNNNNNGTC	1 cut(s)	636
BmgBI	CACGTC	1 cut(s)	379
BmgT120I	GGNCC	4 cut(s)	4, 319, 547, 818
BmiI	GGNNCC	4 cut(s)	321, 369, 423, 998
BmrFI	CCNGG	6 cut(s)	323, 443, 545, 551, 1040, 1268
BoxI	GACNNNNGTC	1 cut(s)	402
BpiI	GAAGAC	1 cut(s)	462
BplI	GAGNNNNNCTC	2 cut(s)	881, 913
BpmI	CTGGAG	1 cut(s)	1156
Bpu10I	CCTNAGC	1 cut(s)	503
Bpu1102I	GCTNAGC	1 cut(s)	359
BpuEI	CTTGAG	2 cut(s)	125, 860
BpuMI	CCSGG	2 cut(s)	323, 443
BsaAI	YACGTR	1 cut(s)	55
BsaHI	GRCGYC	1 cut(s)	389
BsaI	GGTCTC	1 cut(s)	410
BsaJI	CCNNGG	5 cut(s)	315, 393, 426, 549, 814
BsaXI	ACNNNNNCTCC	2 cut(s)	374, 404
Bsc4I	CCNNNNNNNGG	8 cut(s)	343, 448, 550, 617, 621, 741, 984, 985
Bse118I	RCCGGY	3 cut(s)	188, 610, 617
Bse1I	ACTGG	2 cut(s)	934, 1139
BseBI	CCWGG	4 cut(s)	545, 551, 1040, 1268
BseDI	CCNNGG	5 cut(s)	315, 393, 426, 549, 814
BseLI	CCNNNNNNNGG	8 cut(s)	343, 448, 550, 617, 621, 741, 984, 985
BseMII	CTCAG	4 cut(s)	373, 517, 836, 912
BseNI	ACTGG	2 cut(s)	934, 1139
BseRI	GAGGAG	1 cut(s)	1168
BseX3I	CGGCCG	2 cut(s)	612, 619
BseXI	GCAGC	5 cut(s)	122, 279, 318, 466, 1086
BseYI	CCCAGC	1 cut(s)	1070
BsgI	GTGCAG	1 cut(s)	1043
Bsh1236I	CGCG	3 cut(s)	281, 466, 674
Bsh1285I	CGRYCG	2 cut(s)	615, 622
BsiEI	CGRYCG	2 cut(s)	615, 622
BsiHKAI	GWGCWC	1 cut(s)	873
BsiSI	CCGG	7 cut(s)	189, 323, 443, 611, 618, 622, 789
BslI	CCNNNNNNNGG	8 cut(s)	343, 448, 550, 617, 621, 741, 984, 985
BsmAI	GTCTC	4 cut(s)	377, 410, 514, 623
BsmBI	CGTCTC	3 cut(s)	377, 514, 623
Bso31I	GGTCTC	1 cut(s)	410
Bsp1286I	GDGCHC	2 cut(s)	426, 873
Bsp1407I	TGTACA	1 cut(s)	663
Bsp143I	GATC	8 cut(s)	44, 107, 178, 210, 367, 996, 1050, 1173
Bsp1720I	GCTNAGC	1 cut(s)	359
Bsp19I	CCATGG	2 cut(s)	315, 814
Bsp68I	TCGCGA	1 cut(s)	281
BspCNI	CTCAG	4 cut(s)	372, 516, 835, 911
BspFNI	CGCG	3 cut(s)	281, 466, 674
BspHI	TCATGA	1 cut(s)	408
BspLI	GGNNCC	4 cut(s)	321, 369, 423, 998
BspPI	GGATC	4 cut(s)	362, 375, 991, 1004
BspTNI	GGTCTC	1 cut(s)	410
BsrBI	CCGCTC	2 cut(s)	419, 582
BsrFI	RCCGGY	3 cut(s)	188, 610, 617
BsrGI	TGTACA	1 cut(s)	663
BsrI	ACTGG	2 cut(s)	934, 1139
BssAI	RCCGGY	3 cut(s)	188, 610, 617
BssECI	CCNNGG	5 cut(s)	315, 393, 426, 549, 814
BssMI	GATC	8 cut(s)	44, 107, 178, 210, 367, 996, 1050, 1173
BssNI	GRCGYC	1 cut(s)	389
BssSI	CACGAG	2 cut(s)	470, 516
BssT1I	CCWWGG	4 cut(s)	315, 393, 426, 814
Bst2BI	CACGAG	2 cut(s)	470, 516
Bst2UI	CCWGG	4 cut(s)	545, 551, 1040, 1268
Bst4CI	ACNGT	3 cut(s)	304, 634, 1008
Bst6I	CTCTTC	1 cut(s)	882
BstACI	GRCGYC	1 cut(s)	389
BstAUI	TGTACA	1 cut(s)	663
BstBAI	YACGTR	1 cut(s)	55
BstC8I	GCNNGC	4 cut(s)	477, 612, 619, 869
BstDEI	CTNAG	5 cut(s)	41, 359, 503, 822, 898
BstDSI	CCRYGG	2 cut(s)	315, 814
BstFNI	CGCG	3 cut(s)	281, 466, 674
BstHHI	GCGC	2 cut(s)	246, 466
BstKTI	GATC	8 cut(s)	47, 110, 181, 213, 370, 999, 1053, 1176
BstMAI	GTCTC	4 cut(s)	377, 410, 514, 623
BstMBI	GATC	8 cut(s)	44, 107, 178, 210, 367, 996, 1050, 1173
BstMCI	CGRYCG	2 cut(s)	615, 622
BstMWI	GCNNNNNNNGC	2 cut(s)	472, 962
BstNI	CCWGG	4 cut(s)	545, 551, 1040, 1268
BstNSI	RCATGY	4 cut(s)	62, 882, 1283, 1287
BstPAI	GACNNNNGTC	1 cut(s)	402
BstSCI	CCNGG	6 cut(s)	321, 441, 543, 549, 1038, 1266
BstUI	CGCG	3 cut(s)	281, 466, 674
BstV1I	GCAGC	5 cut(s)	122, 279, 318, 466, 1086
BstV2I	GAAGAC	1 cut(s)	462
BstX2I	RGATCY	4 cut(s)	44, 367, 996, 1173
BstYI	RGATCY	4 cut(s)	44, 367, 996, 1173
BstZI	CGGCCG	2 cut(s)	612, 619
BtgI	CCRYGG	2 cut(s)	315, 814
BtgZI	GCGATG	1 cut(s)	116
BtrI	CACGTC	1 cut(s)	379
BtsIMutI	CAGTG	1 cut(s)	802
BtuMI	TCGCGA	1 cut(s)	281
Cac8I	GCNNGC	4 cut(s)	477, 612, 619, 869
CciI	TCATGA	1 cut(s)	408
CfoI	GCGC	2 cut(s)	246, 466
Cfr10I	RCCGGY	3 cut(s)	188, 610, 617
Cfr13I	GGNCC	4 cut(s)	4, 319, 547, 818
CseI	GACGC	4 cut(s)	58, 378, 496, 680
CsiI	ACCWGGT	1 cut(s)	1266
Csp6I	GTAC	9 cut(s)	32, 38, 52, 183, 484, 664, 757, 774, 1004
CviQI	GTAC	9 cut(s)	32, 38, 52, 183, 484, 664, 757, 774, 1004
DdeI	CTNAG	5 cut(s)	41, 359, 503, 822, 898
DpnI	GATC	8 cut(s)	46, 109, 180, 212, 369, 998, 1052, 1175
DpnII	GATC	8 cut(s)	44, 107, 178, 210, 367, 996, 1050, 1173
DriI	GACNNNNNGTC	1 cut(s)	636
EaeI	YGGCCR	7 cut(s)	429, 526, 541, 612, 619, 799, 931
EagI	CGGCCG	2 cut(s)	612, 619
Eam1104I	CTCTTC	1 cut(s)	882
Eam1105I	GACNNNNNGTC	1 cut(s)	636
EarI	CTCTTC	1 cut(s)	882
EciI	GGCGGA	1 cut(s)	341
Ecl136II	GAGCTC	1 cut(s)	871
EclXI	CGGCCG	2 cut(s)	612, 619
Eco130I	CCWWGG	4 cut(s)	315, 393, 426, 814
Eco147I	AGGCCT	1 cut(s)	1122
Eco24I	GRGCYC	2 cut(s)	426, 873
Eco31I	GGTCTC	1 cut(s)	410
Eco47I	GGWCC	3 cut(s)	4, 319, 818
Eco52I	CGGCCG	2 cut(s)	612, 619
Eco53kI	GAGCTC	1 cut(s)	871
EcoICRI	GAGCTC	1 cut(s)	871
EcoRII	CCWGG	4 cut(s)	543, 549, 1038, 1266
EcoT14I	CCWWGG	4 cut(s)	315, 393, 426, 814
EcoT22I	ATGCAT	1 cut(s)	1285
EcoT38I	GRGCYC	2 cut(s)	426, 873
ErhI	CCWWGG	4 cut(s)	315, 393, 426, 814
Esp3I	CGTCTC	3 cut(s)	377, 514, 623
FauI	CCCGC	1 cut(s)	468
FblI	GTMKAC	1 cut(s)	1113
Fnu4HI	GCNGC	7 cut(s)	136, 293, 332, 467, 480, 615, 1075
FriOI	GRGCYC	2 cut(s)	426, 873
Fsp4HI	GCNGC	7 cut(s)	136, 293, 332, 467, 480, 615, 1075
FspBI	CTAG	4 cut(s)	35, 341, 951, 957
GlaI	GCGC	2 cut(s)	245, 465
GluI	GCNGC	7 cut(s)	136, 293, 332, 467, 480, 615, 1075
GsaI	CCCAGC	1 cut(s)	1074
GsuI	CTGGAG	1 cut(s)	1156
HapII	CCGG	7 cut(s)	189, 323, 443, 611, 618, 622, 789
HgaI	GACGC	4 cut(s)	58, 378, 496, 680
HhaI	GCGC	2 cut(s)	246, 466
Hin1I	GRCGYC	1 cut(s)	389
Hin6I	GCGC	2 cut(s)	244, 464
HinP1I	GCGC	2 cut(s)	244, 464
HincII	GTYRAC	1 cut(s)	1114
HindII	GTYRAC	1 cut(s)	1114
HindIII	AAGCTT	2 cut(s)	260, 804
HinfI	GANTC	6 cut(s)	115, 726, 792, 942, 1187, 1244
HpaII	CCGG	7 cut(s)	189, 323, 443, 611, 618, 622, 789
HphI	GGTGA	1 cut(s)	1000
Hpy166II	GTNNAC	4 cut(s)	349, 744, 776, 1114
Hpy188I	TCNGA	7 cut(s)	376, 652, 825, 886, 901, 1001, 1050
Hpy188III	TCNNGA	8 cut(s)	142, 173, 214, 280, 409, 839, 874, 1171
Hpy8I	GTNNAC	4 cut(s)	349, 744, 776, 1114
Hpy99I	CGWCG	3 cut(s)	380, 715, 1118
HpyAV	CCTTC	2 cut(s)	649, 1112
HpyCH4III	ACNGT	3 cut(s)	304, 634, 1008
HpyCH4IV	ACGT	7 cut(s)	54, 98, 378, 459, 713, 849, 1092
HpyCH4V	TGCA	5 cut(s)	58, 439, 1060, 1283, 1295
HpyF10VI	GCNNNNNNNGC	2 cut(s)	472, 962
HpyF3I	CTNAG	5 cut(s)	41, 359, 503, 822, 898
HpySE526I	ACGT	7 cut(s)	54, 98, 378, 459, 713, 849, 1092
Hsp92I	GRCGYC	1 cut(s)	389
HspAI	GCGC	2 cut(s)	244, 464
KroI	GCCGGC	2 cut(s)	610, 617
KroNI	GCCGGC	2 cut(s)	612, 619
Kzo9I	GATC	8 cut(s)	44, 107, 178, 210, 367, 996, 1050, 1173
LmnI	GCTCC	5 cut(s)	241, 328, 339, 421, 685
Lsp1109I	GCAGC	5 cut(s)	122, 279, 318, 466, 1086
MabI	ACCWGGT	1 cut(s)	1266
MaeI	CTAG	4 cut(s)	35, 341, 951, 957
MaeII	ACGT	7 cut(s)	54, 98, 378, 459, 713, 849, 1092
MaeIII	GTNAC	1 cut(s)	853
MalI	GATC	8 cut(s)	46, 109, 180, 212, 369, 998, 1052, 1175
MbiI	CCGCTC	2 cut(s)	419, 582
MboI	GATC	8 cut(s)	44, 107, 178, 210, 367, 996, 1050, 1173
MboII	GAAGA	8 cut(s)	188, 217, 220, 236, 245, 467, 899, 1141
MflI	RGATCY	4 cut(s)	44, 367, 996, 1173
MhlI	GDGCHC	2 cut(s)	426, 873
MlsI	TGGCCA	3 cut(s)	528, 801, 933
MluCI	AATT	4 cut(s)	167, 960, 1016, 1082
MluI	ACGCGT	1 cut(s)	672
MluNI	TGGCCA	3 cut(s)	528, 801, 933
MlyI	GAGTC	2 cut(s)	109, 720
MmeI	TCCRAC	4 cut(s)	31, 399, 696, 807
Mox20I	TGGCCA	3 cut(s)	528, 801, 933
Mph1103I	ATGCAT	1 cut(s)	1285
MroNI	GCCGGC	2 cut(s)	610, 617
MscI	TGGCCA	3 cut(s)	528, 801, 933
Msp20I	TGGCCA	3 cut(s)	528, 801, 933
MspA1I	CMGCKG	1 cut(s)	1253
MspI	CCGG	7 cut(s)	189, 323, 443, 611, 618, 622, 789
MspR9I	CCNGG	6 cut(s)	323, 443, 545, 551, 1040, 1268
MvaI	CCWGG	4 cut(s)	545, 551, 1040, 1268
MvnI	CGCG	3 cut(s)	281, 466, 674
MwoI	GCNNNNNNNGC	2 cut(s)	472, 962
NaeI	GCCGGC	2 cut(s)	612, 619
NciI	CCSGG	2 cut(s)	323, 443
NcoI	CCATGG	2 cut(s)	315, 814
NdeII	GATC	8 cut(s)	44, 107, 178, 210, 367, 996, 1050, 1173
NgoMIV	GCCGGC	2 cut(s)	610, 617
NlaIV	GGNNCC	4 cut(s)	321, 369, 423, 998
NmeAIII	GCCGAG	2 cut(s)	440, 491
NruI	TCGCGA	1 cut(s)	281
NsiI	ATGCAT	1 cut(s)	1285
NspI	RCATGY	4 cut(s)	62, 882, 1283, 1287
PagI	TCATGA	1 cut(s)	408
PceI	AGGCCT	1 cut(s)	1122
PciI	ACATGT	1 cut(s)	878
PcsI	WCGNNNNNNNCGW	2 cut(s)	504, 1110
PdiI	GCCGGC	2 cut(s)	612, 619
PfeI	GAWTC	4 cut(s)	792, 942, 1187, 1244
PflFI	GACNNNGTC	1 cut(s)	388
PflMI	CCANNNNNTGG	1 cut(s)	741
PkrI	GCNGC	7 cut(s)	137, 294, 333, 468, 481, 616, 1076
PleI	GAGTC	2 cut(s)	109, 720
PpsI	GAGTC	2 cut(s)	109, 720
Ppu21I	YACGTR	1 cut(s)	55
PscI	ACATGT	1 cut(s)	878
PshAI	GACNNNNGTC	1 cut(s)	402
PsiI	TTATAA	1 cut(s)	200
Psp124BI	GAGCTC	1 cut(s)	873
Psp6I	CCWGG	4 cut(s)	543, 549, 1038, 1266
PspFI	CCCAGC	1 cut(s)	1070
PspGI	CCWGG	4 cut(s)	543, 549, 1038, 1266
PspN4I	GGNNCC	4 cut(s)	321, 369, 423, 998
PspPI	GGNCC	4 cut(s)	4, 319, 547, 818
PsuI	RGATCY	4 cut(s)	44, 367, 996, 1173
PsyI	GACNNNGTC	1 cut(s)	388
RruI	TCGCGA	1 cut(s)	281
RsaI	GTAC	9 cut(s)	33, 39, 53, 184, 485, 665, 758, 775, 1005
RsaNI	GTAC	9 cut(s)	32, 38, 52, 183, 484, 664, 757, 774, 1004
SacI	GAGCTC	1 cut(s)	873
SalI	GTCGAC	1 cut(s)	1112
SatI	GCNGC	7 cut(s)	136, 293, 332, 467, 480, 615, 1075
Sau3AI	GATC	8 cut(s)	44, 107, 178, 210, 367, 996, 1050, 1173
Sau96I	GGNCC	4 cut(s)	4, 319, 547, 818
ScaI	AGTACT	2 cut(s)	39, 1005
SchI	GAGTC	2 cut(s)	109, 720
ScrFI	CCNGG	6 cut(s)	323, 443, 545, 551, 1040, 1268
SduI	GDGCHC	2 cut(s)	426, 873
SexAI	ACCWGGT	1 cut(s)	1266
SgrAI	CRCCGGYG	1 cut(s)	188
SinI	GGWCC	3 cut(s)	4, 319, 818
SmlI	CTYRAG	2 cut(s)	140, 839
SmoI	CTYRAG	2 cut(s)	140, 839
SpeI	ACTAGT	1 cut(s)	34
Sse9I	AATT	4 cut(s)	167, 960, 1016, 1082
SseBI	AGGCCT	1 cut(s)	1122
SspMI	CTAG	4 cut(s)	35, 341, 951, 957
SstI	GAGCTC	1 cut(s)	873
StuI	AGGCCT	1 cut(s)	1122
StyD4I	CCNGG	6 cut(s)	321, 441, 543, 549, 1038, 1266
StyI	CCWWGG	4 cut(s)	315, 393, 426, 814
TaaI	ACNGT	3 cut(s)	304, 634, 1008
TaiI	ACGT	7 cut(s)	57, 101, 381, 462, 716, 852, 1095
TaqI	TCGA	3 cut(s)	106, 1086, 1113
TasI	AATT	4 cut(s)	167, 960, 1016, 1082
TatI	WGTACW	5 cut(s)	31, 37, 663, 756, 1003
TauI	GCSGC	2 cut(s)	469, 617
TfiI	GAWTC	4 cut(s)	792, 942, 1187, 1244
TscAI	CASTG	1 cut(s)	802
TseI	GCWGC	5 cut(s)	135, 292, 331, 479, 1074
TspDTI	ATGAA	1 cut(s)	143
TspGWI	ACGGA	3 cut(s)	326, 360, 366
TspRI	CASTG	1 cut(s)	802
Tth111I	GACNNNGTC	1 cut(s)	388
Van91I	CCANNNNNTGG	1 cut(s)	741
VpaK11BI	GGWCC	3 cut(s)	4, 319, 818
XapI	RAATTY	2 cut(s)	1016, 1082
XceI	RCATGY	4 cut(s)	62, 882, 1283, 1287
XcmI	CCANNNNNNNNNTGG	2 cut(s)	557, 917
XmiI	GTMKAC	1 cut(s)	1113
XspI	CTAG	4 cut(s)	35, 341, 951, 957
ZrmI	AGTACT	2 cut(s)	39, 1005
Zsp2I	ATGCAT	1 cut(s)	1285

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.