Rh7BG019300

Eukaryotic peptide chain release factor GTP-binding

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
Physical Location & Seq
Forward (+)
1233620 .. 1240146
6527 bp
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UTR
Exon/CDS
Intron
Rh7BG019300.1

Sequence Viewer

Length: 1440 bp
ATGGATATTGAGGAGGAAATCCGGTCGCTGCAGCTGGATTCAGCAGGTTCCAGGGATGCCATTGAGCCAGTGCAAAAAGTGAAGGAGAAGACAGACGAACATGACGAGGTGGAAGTGAATAAGAAGAGGCACTTGAATGTTGTTTTTATTGGCCATGTGGATGCTGGAAAGTCAACAACAGGAGGTCAAATCCTTTTCCTTAGTGGTCAGGTTGATGATCGTACAATTCAAAAATATGAAAAAGAAGCGAAAGACAAAAGTAGGGAGAGCTGGTATATGGCATTTATCATGGATACCAATGAAGAAGAGAGGGCCAAGGGTAAAACTATTGAAGTTGGACGAGCACATTTTGAAACTGAGACAACTCGATTTACGATCTTGGATGCACCAGGTCACAAAAGTTATGTACCAAATATGATCAGTGGTGCATCTCAGGCTGATATAGGAGTACTGGTAATATCTGCCCGGAAAGGAGAATTTGAAACAGGGTATGAAAGAGGTGGACAGACCCGTGAACATGTTCAGCTTGCAAAAACTTTGGGAGTGTCTAAACTGCTTGTTGTTGTGAATAAAATGGATGATCTTACTGTGAACTGGTCAAAAGAAAGGTATGATGAAATTGAGTCGAAGATGGTACCATTCCTTAAGACATCAGGCTACAACGTGAAGAAAGATGTGCAGTTCATACCAATATCTGGTCTTCTTGGTACAAACATGAAAACTAGGTTGAGTAAAGAAACTTGTTCATGGTGGGATGGCCCCTGCCTTTTTGAAGCCCTTGATTCTATTGAAGTTCCTCTACGAGACCCTAAAGGTCCATTCAGGTTGCCCATCATAGATAAATTCAAGGACATGGGAACTACTGTTATGGGGAAAGTGGAATCTGGTTCAGTGCGTGAAGGGGATTCACTGATTATCATGCCAAATAAGGCTCAAGTGAAAGTTATTGCTATATTCATTGATGAAGATAGGGTCAAATATGCTGGACCTGGTGAAAATCTTCGAGTTAGGTTATCAGGTATCGACGACGAGGACATACTGTCAGGTTTTGTCTTGTCAAGTGTGGCGAATCCAATACCTGCTGTTACCGAGTTTTATGCGCAGTTGCAGATCCTTGAGTTGCTGGAAAATGCAATCTTTACACCTGGATACAAAGCTATCCTGCATATTCACTCTGTTGTTGAGGAATGTGAGATCGTTGATCTGCTAGAGGAAATTGATATGAAGACTAAGAAACCTAAGAAGAAGAAGCCTCTTTTTGTGAAGAATGGTGCTGTTATTAAATGCCGGATTCAGGTGACCAACTTGATATGCATGGAGAAGTTCTCCGATTTTCCCCAACTTGGAAGGTTTACTCTTCGTACTGAAGGTAAAACTATTGCTGTGGGAAAAGTAATTGATGCTCCATCCAAGAAAAGTAAACGATCTTCGACAAACTAA

Protein Analysis

479

Amino Acids

53.66

Weight (kDa)

6.33

Isoelectric Point (pI)

38.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GTP_EFTU PF00009 42 - 247 8.4e-50 Elongation factor Tu GTP binding domain
GTP_EFTU_D2 PF03144 286 - 352 1.2e-09 Elongation factor Tu domain 2
GTP_EFTU_D3 PF03143 359 - 466 3.4e-23 Elongation factor Tu C-terminal domain
GTP-eEF1A_C PF22594 364 - 465 8.4e-30 GTP-eEF1A C-terminal domain-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1101
Acc36I ACCTGC 2 cut(s) 35, 1087
Acc65I GGTACC 1 cut(s) 634
AccB1I GGYRCC 1 cut(s) 634
AccB7I CCANNNNNTGG 1 cut(s) 695
AclWI GGATC 1 cut(s) 1105
AcoI YGGCCR 1 cut(s) 151
AcsI RAATTY 2 cut(s) 476, 842
AcuI CTGAAG 1 cut(s) 1386
AfaI GTAC 6 cut(s) 223, 408, 450, 636, 709, 1363
AfiI CCNNNNNNNGG 3 cut(s) 695, 1294, 1343
AflII CTTAAG 1 cut(s) 644
AflIII ACRYGT 1 cut(s) 517
AgsI TTSAA 8 cut(s) 136, 230, 332, 353, 482, 773, 791, 847
AhdI GACNNNNNGTC 1 cut(s) 1039
AjnI CCWGG 4 cut(s) 50, 388, 988, 1144
AluBI AGCT 4 cut(s) 34, 270, 526, 1157
AluI AGCT 4 cut(s) 34, 270, 526, 1157
Alw21I GWGCWC 1 cut(s) 346
Alw26I GTCTC 2 cut(s) 353, 798
AlwI GGATC 1 cut(s) 1105
AoxI GGCC 3 cut(s) 151, 312, 757
ApeKI GCWGC 2 cut(s) 28, 31
ApoI RAATTY 2 cut(s) 476, 842
Asp700I GAANNNNTTC 2 cut(s) 519, 999
Asp718I GGTACC 1 cut(s) 634
AspLEI GCGC 1 cut(s) 1102
AspS9I GGNCC 4 cut(s) 312, 758, 815, 986
AsuC2I CCSGG 1 cut(s) 466
AsuHPI GGTGA 2 cut(s) 1004, 1309
AvaII GGWCC 2 cut(s) 815, 986
BalI TGGCCA 1 cut(s) 153
BanI GGYRCC 1 cut(s) 634
BarI GAAGNNNNNNTAC 3 cut(s) 783, 815, 1411
BbsI GAAGAC 3 cut(s) 95, 692, 1232
Bbv12I GWGCWC 1 cut(s) 346
BbvI GCAGC 2 cut(s) 15, 43
BccI CCATC 4 cut(s) 625, 749, 839, 1414
BcgI CGANNNNNNTGC 2 cut(s) 1079, 1113
BciT130I CCWGG 4 cut(s) 52, 390, 990, 1146
BciVI GTATCC 2 cut(s) 286, 1142
BclI TGATCA 1 cut(s) 417
BcnI CCSGG 1 cut(s) 466
BcoDI GTCTC 2 cut(s) 353, 798
BfaI CTAG 2 cut(s) 723, 1208
BfmI CTRYAG 1 cut(s) 29
BfrI CTTAAG 1 cut(s) 644
BfuAI ACCTGC 2 cut(s) 35, 1087
BfuI GTATCC 2 cut(s) 286, 1142
BisI GCNGC 2 cut(s) 29, 32
BlsI GCNGC 2 cut(s) 30, 33
BmcAI AGTACT 1 cut(s) 450
Bme1390I CCNGG 5 cut(s) 52, 390, 466, 990, 1146
Bme18I GGWCC 2 cut(s) 815, 986
BmeRI GACNNNNNGTC 1 cut(s) 1039
BmgT120I GGNCC 4 cut(s) 312, 758, 815, 986
BmiI GGNNCC 3 cut(s) 49, 636, 760
BmrFI CCNGG 5 cut(s) 52, 390, 466, 990, 1146
BmsI GCATC 5 cut(s) 46, 151, 373, 437, 1390
BpiI GAAGAC 3 cut(s) 95, 692, 1232
BplI GAGNNNNNCTC 2 cut(s) 1310, 1342
BpuEI CTTGAG 2 cut(s) 918, 1136
BpuMI CCSGG 1 cut(s) 466
BsaI GGTCTC 1 cut(s) 798
BsaJI CCNNGG 2 cut(s) 51, 315
BsaWI WCCGGW 1 cut(s) 21
BsaXI ACNNNNNCTCC 4 cut(s) 257, 287, 438, 468
Bsc4I CCNNNNNNNGG 3 cut(s) 695, 1294, 1343
Bse1I ACTGG 3 cut(s) 68, 456, 599
BseBI CCWGG 4 cut(s) 52, 390, 990, 1146
BseDI CCNNGG 2 cut(s) 51, 315
BseGI GGATG 6 cut(s) 61, 166, 388, 583, 760, 1406
BseLI CCNNNNNNNGG 3 cut(s) 695, 1294, 1343
BseMII CTCAG 2 cut(s) 348, 446
BseNI ACTGG 3 cut(s) 68, 456, 599
BseRI GAGGAG 1 cut(s) 26
BseXI GCAGC 2 cut(s) 15, 43
BsgI GTGCAG 1 cut(s) 698
Bsh1285I CGRYCG 1 cut(s) 26
BshFI GGCC 3 cut(s) 153, 314, 759
BshNI GGYRCC 1 cut(s) 634
BsiEI CGRYCG 1 cut(s) 26
BsiHKAI GWGCWC 1 cut(s) 346
BsiSI CCGG 3 cut(s) 22, 466, 1288
BslI CCNNNNNNNGG 3 cut(s) 695, 1294, 1343
BsmAI GTCTC 2 cut(s) 353, 798
BsnI GGCC 3 cut(s) 153, 314, 759
Bso31I GGTCTC 1 cut(s) 798
Bsp1286I GDGCHC 1 cut(s) 346
Bsp143I GATC 8 cut(s) 217, 375, 417, 580, 1110, 1194, 1201, 1424
BspANI GGCC 3 cut(s) 153, 314, 759
BspCNI CTCAG 2 cut(s) 349, 445
BspLI GGNNCC 3 cut(s) 49, 636, 760
BspMAI CTGCAG 1 cut(s) 33
BspMI ACCTGC 2 cut(s) 35, 1087
BspPI GGATC 1 cut(s) 1105
BspT107I GGYRCC 1 cut(s) 634
BspTI CTTAAG 1 cut(s) 644
BspTNI GGTCTC 1 cut(s) 798
BsrI ACTGG 3 cut(s) 68, 456, 599
BssECI CCNNGG 2 cut(s) 51, 315
BssMI GATC 8 cut(s) 217, 375, 417, 580, 1110, 1194, 1201, 1424
BssT1I CCWWGG 1 cut(s) 315
Bst2UI CCWGG 4 cut(s) 52, 390, 990, 1146
Bst4CI ACNGT 3 cut(s) 589, 865, 1041
Bst6I CTCTTC 3 cut(s) 119, 300, 1362
BstAFI CTTAAG 1 cut(s) 644
BstC8I GCNNGC 1 cut(s) 528
BstDEI CTNAG 5 cut(s) 200, 357, 432, 1230, 1239
BstEII GGTNACC 1 cut(s) 1297
BstF5I GGATG 6 cut(s) 61, 166, 388, 583, 760, 1406
BstHHI GCGC 1 cut(s) 1102
BstKTI GATC 8 cut(s) 220, 378, 420, 583, 1113, 1197, 1204, 1427
BstMAI GTCTC 2 cut(s) 353, 798
BstMBI GATC 8 cut(s) 217, 375, 417, 580, 1110, 1194, 1201, 1424
BstMCI CGRYCG 1 cut(s) 26
BstMWI GCNNNNNNNGC 1 cut(s) 434
BstNI CCWGG 4 cut(s) 52, 390, 990, 1146
BstNSI RCATGY 1 cut(s) 521
BstPI GGTNACC 1 cut(s) 1297
BstSCI CCNGG 5 cut(s) 50, 388, 464, 988, 1144
BstSFI CTRYAG 1 cut(s) 29
BstV1I GCAGC 2 cut(s) 15, 43
BstV2I GAAGAC 3 cut(s) 95, 692, 1232
BstX2I RGATCY 1 cut(s) 1110
BstYI RGATCY 1 cut(s) 1110
BsuI GTATCC 2 cut(s) 286, 1142
BsuRI GGCC 3 cut(s) 153, 314, 759
BtsCI GGATG 6 cut(s) 61, 166, 388, 583, 760, 1406
BtsIMutI CAGTG 4 cut(s) 75, 427, 897, 908
BveI ACCTGC 2 cut(s) 35, 1087
Cac8I GCNNGC 1 cut(s) 528
CfoI GCGC 1 cut(s) 1102
Cfr13I GGNCC 4 cut(s) 312, 758, 815, 986
CsiI ACCWGGT 2 cut(s) 388, 988
Csp6I GTAC 6 cut(s) 222, 407, 449, 635, 708, 1362
CviAII CATG 9 cut(s) 101, 155, 289, 518, 715, 747, 853, 919, 1315
CviQI GTAC 6 cut(s) 222, 407, 449, 635, 708, 1362
DdeI CTNAG 5 cut(s) 200, 357, 432, 1230, 1239
DpnI GATC 8 cut(s) 219, 377, 419, 582, 1112, 1196, 1203, 1426
DpnII GATC 8 cut(s) 217, 375, 417, 580, 1110, 1194, 1201, 1424
DriI GACNNNNNGTC 1 cut(s) 1039
EaeI YGGCCR 1 cut(s) 151
Eam1104I CTCTTC 3 cut(s) 119, 300, 1362
Eam1105I GACNNNNNGTC 1 cut(s) 1039
EarI CTCTTC 3 cut(s) 119, 300, 1362
Eco130I CCWWGG 1 cut(s) 315
Eco31I GGTCTC 1 cut(s) 798
Eco47I GGWCC 2 cut(s) 815, 986
Eco57I CTGAAG 1 cut(s) 1386
Eco91I GGTNACC 1 cut(s) 1297
EcoO65I GGTNACC 1 cut(s) 1297
EcoRII CCWGG 4 cut(s) 50, 388, 988, 1144
EcoT14I CCWWGG 1 cut(s) 315
EcoT22I ATGCAT 1 cut(s) 1316
ErhI CCWWGG 1 cut(s) 315
FaeI CATG 9 cut(s) 104, 158, 292, 521, 718, 750, 856, 922, 1318
FalI AAGNNNNNCTT 2 cut(s) 116, 148
FatI CATG 9 cut(s) 100, 154, 288, 517, 714, 746, 852, 918, 1314
FbaI TGATCA 1 cut(s) 417
Fnu4HI GCNGC 2 cut(s) 29, 32
FokI GGATG 6 cut(s) 68, 173, 395, 590, 767, 1393
Fsp4HI GCNGC 2 cut(s) 29, 32
FspBI CTAG 2 cut(s) 723, 1208
FspI TGCGCA 1 cut(s) 1101
GlaI GCGC 1 cut(s) 1101
GluI GCNGC 2 cut(s) 29, 32
HaeIII GGCC 3 cut(s) 153, 314, 759
HapII CCGG 3 cut(s) 22, 466, 1288
HhaI GCGC 1 cut(s) 1102
Hin1II CATG 9 cut(s) 104, 158, 292, 521, 718, 750, 856, 922, 1318
Hin6I GCGC 1 cut(s) 1100
HinP1I GCGC 1 cut(s) 1100
HincII GTYRAC 1 cut(s) 174
HindII GTYRAC 1 cut(s) 174
HinfI GANTC 7 cut(s) 38, 623, 782, 881, 905, 1069, 1291
HpaII CCGG 3 cut(s) 22, 466, 1288
HphI GGTGA 2 cut(s) 1004, 1309
Hpy166II GTNNAC 6 cut(s) 174, 503, 515, 592, 1353, 1421
Hpy188I TCNGA 1 cut(s) 1330
Hpy8I GTNNAC 6 cut(s) 174, 503, 515, 592, 1353, 1421
Hpy99I CGWCG 2 cut(s) 1028, 1031
HpyAV CCTTC 4 cut(s) 76, 893, 1341, 1361
HpyCH4III ACNGT 3 cut(s) 589, 865, 1041
HpyCH4IV ACGT 1 cut(s) 663
HpyF10VI GCNNNNNNNGC 1 cut(s) 434
HpyF3I CTNAG 5 cut(s) 200, 357, 432, 1230, 1239
HpySE526I ACGT 1 cut(s) 663
Hsp92II CATG 9 cut(s) 104, 158, 292, 521, 718, 750, 856, 922, 1318
HspAI GCGC 1 cut(s) 1100
KpnI GGTACC 1 cut(s) 638
Ksp22I TGATCA 1 cut(s) 417
Kzo9I GATC 8 cut(s) 217, 375, 417, 580, 1110, 1194, 1201, 1424
LmnI GCTCC 1 cut(s) 1408
Lsp1109I GCAGC 2 cut(s) 15, 43
LweI GCATC 5 cut(s) 46, 151, 373, 437, 1390
MabI ACCWGGT 2 cut(s) 388, 988
MaeI CTAG 2 cut(s) 723, 1208
MaeII ACGT 1 cut(s) 663
MaeIII GTNAC 3 cut(s) 392, 1084, 1297
MalI GATC 8 cut(s) 219, 377, 419, 582, 1112, 1196, 1203, 1426
MboI GATC 8 cut(s) 217, 375, 417, 580, 1110, 1194, 1201, 1424
MflI RGATCY 1 cut(s) 1110
MhlI GDGCHC 1 cut(s) 346
MlsI TGGCCA 1 cut(s) 153
MluCI AATT 6 cut(s) 225, 476, 618, 842, 1215, 1395
MluNI TGGCCA 1 cut(s) 153
MlyI GAGTC 1 cut(s) 632
MmeI TCCRAC 1 cut(s) 316
Mox20I TGGCCA 1 cut(s) 153
Mph1103I ATGCAT 1 cut(s) 1316
MroXI GAANNNNTTC 2 cut(s) 519, 999
MscI TGGCCA 1 cut(s) 153
MseI TTAA 2 cut(s) 645, 1281
MslI CAYNNNNRTG 2 cut(s) 135, 159
Msp20I TGGCCA 1 cut(s) 153
MspA1I CMGCKG 1 cut(s) 34
MspCI CTTAAG 1 cut(s) 644
MspI CCGG 3 cut(s) 22, 466, 1288
MspR9I CCNGG 5 cut(s) 52, 390, 466, 990, 1146
MvaI CCWGG 4 cut(s) 52, 390, 990, 1146
MwoI GCNNNNNNNGC 1 cut(s) 434
NciI CCSGG 1 cut(s) 466
NdeII GATC 8 cut(s) 217, 375, 417, 580, 1110, 1194, 1201, 1424
NlaIII CATG 9 cut(s) 104, 158, 292, 521, 718, 750, 856, 922, 1318
NlaIV GGNNCC 3 cut(s) 49, 636, 760
NmuCI GTSAC 2 cut(s) 392, 1297
NsbI TGCGCA 1 cut(s) 1101
NsiI ATGCAT 1 cut(s) 1316
NspI RCATGY 1 cut(s) 521
PciI ACATGT 1 cut(s) 517
PcsI WCGNNNNNNNCGW 1 cut(s) 102
PdmI GAANNNNTTC 2 cut(s) 519, 999
PfeI GAWTC 6 cut(s) 38, 782, 881, 905, 1069, 1291
PflMI CCANNNNNTGG 1 cut(s) 695
PkrI GCNGC 2 cut(s) 30, 33
PleI GAGTC 1 cut(s) 631
PpsI GAGTC 1 cut(s) 631
PscI ACATGT 1 cut(s) 517
Psp6I CCWGG 4 cut(s) 50, 388, 988, 1144
PspEI GGTNACC 1 cut(s) 1297
PspGI CCWGG 4 cut(s) 50, 388, 988, 1144
PspN4I GGNNCC 3 cut(s) 49, 636, 760
PspPI GGNCC 4 cut(s) 312, 758, 815, 986
PstI CTGCAG 1 cut(s) 33
PsuI RGATCY 1 cut(s) 1110
PvuII CAGCTG 1 cut(s) 34
RsaI GTAC 6 cut(s) 223, 408, 450, 636, 709, 1363
RsaNI GTAC 6 cut(s) 222, 407, 449, 635, 708, 1362
RseI CAYNNNNRTG 2 cut(s) 135, 159
SaqAI TTAA 2 cut(s) 645, 1281
SatI GCNGC 2 cut(s) 29, 32
Sau3AI GATC 8 cut(s) 217, 375, 417, 580, 1110, 1194, 1201, 1424
Sau96I GGNCC 4 cut(s) 312, 758, 815, 986
ScaI AGTACT 1 cut(s) 450
SchI GAGTC 1 cut(s) 632
ScrFI CCNGG 5 cut(s) 52, 390, 466, 990, 1146
SduI GDGCHC 1 cut(s) 346
SexAI ACCWGGT 2 cut(s) 388, 988
SfaNI GCATC 5 cut(s) 46, 151, 373, 437, 1390
SfcI CTRYAG 1 cut(s) 29
SinI GGWCC 2 cut(s) 815, 986
SmiMI CAYNNNNRTG 2 cut(s) 135, 159
SmlI CTYRAG 3 cut(s) 644, 933, 1115
SmoI CTYRAG 3 cut(s) 644, 933, 1115
Sse9I AATT 6 cut(s) 225, 476, 618, 842, 1215, 1395
SspMI CTAG 2 cut(s) 723, 1208
StyD4I CCNGG 5 cut(s) 50, 388, 464, 988, 1144
StyI CCWWGG 1 cut(s) 315
TaaI ACNGT 3 cut(s) 589, 865, 1041
TaiI ACGT 1 cut(s) 666
TaqI TCGA 5 cut(s) 367, 626, 1003, 1023, 1430
TasI AATT 6 cut(s) 225, 476, 618, 842, 1215, 1395
TatI WGTACW 1 cut(s) 448
TfiI GAWTC 6 cut(s) 38, 782, 881, 905, 1069, 1291
Tru1I TTAA 2 cut(s) 645, 1281
Tru9I TTAA 2 cut(s) 645, 1281
TscAI CASTG 4 cut(s) 75, 427, 897, 915
TseFI GTSAC 2 cut(s) 392, 1297
TseI GCWGC 2 cut(s) 28, 31
Tsp45I GTSAC 2 cut(s) 392, 1297
TspRI CASTG 4 cut(s) 75, 427, 897, 915
Van91I CCANNNNNTGG 1 cut(s) 695
Vha464I CTTAAG 1 cut(s) 644
VpaK11BI GGWCC 2 cut(s) 815, 986
XapI RAATTY 2 cut(s) 476, 842
XceI RCATGY 1 cut(s) 521
XcmI CCANNNNNNNNNTGG 1 cut(s) 161
XmnI GAANNNNTTC 2 cut(s) 519, 999
XspI CTAG 2 cut(s) 723, 1208
ZrmI AGTACT 1 cut(s) 450
Zsp2I ATGCAT 1 cut(s) 1316
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.