Rmu_sc0000901.1_g000004

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000901.1
OG0006896
Physical Location & Seq
Reverse (-)
20724 .. 27921
7198 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 3705 bp
atggaagtgaatttagtagcaagtggaattcaagaagaagatgcttttggagttaacgagaattatcacattgacaatcctgttttggagggcgaaaatgaaacgtgtgggatttgcatggataccattatcgataggggtgttctggattgctgccagcactggttttgttttgcatgcatcgacaattgggccactattacaaatctttgcccgctttgccagaacgaatttcaagtgatcacatgtgttccggtatatgatactgttgggagcaacaaagtggatgatgatccatcttccagagatgatgattggagtgttgaagggatgaataacactgtctcatttccatcatactatattgatgaaaacaggtctaacagccagtacgatcttgaaaatagtgaatctttgactgaggatactttttcaagaaaggtgtctgtatcttctgttgatactggtgacacagctgttgtagtctcaatggttggagattcaggtcagagcattttgccaaacgttgaagttggcaagggctttgaaactgaatcactggtatcagcttctgaagaacgccacgagtcggaaataccttcaggggtgaaaactattaaattggaagcacaggaattagaactgtccctgtcctgtgatacctccttcagtttaccttcaaatgctttagcacataagcagcttaagtcgagtactggtgaatcaatgaatgaccttagtagctttgatggcctcaaaagttcttctgggaagcttaatgaatcacatattagtaaaaaactatctaacagccagtccaatatgggtctaaatcttgggttatgtgggggttcgtttttgtcagttgacatgaatagtaccggaactgaacaccacgacactaaagatctgaagcagcataatccttcagaagaatatttgccaaaagctgacaggattgtaccggatgctagttcagatgctcctgccatgactggtggaaagagaaaacgcacagattgcagtgatggcgttagtgctgatgatagagatacaaaccctaagcttaagaacaaagttgctgtaaagaaaatcagagatggggagaagattcaacagattgcttccaaggaccaagccaaagcgtgtctttcagactctggaaatggctccagcctgactgtagttcccaaagatagcgagttaagatgtcatcctgtactgaaccctacttctgaaatattgagcattgttcgaaccacaaaccgtaagtcttccaaggggcttgcaggccctaaatctgtaaaatcatcagaagaacaagattcaatggctagtttgagagttaaaaagataatgaggagagatgctgaggacaaggaatcatctatggttgttcagagactaagaaaggaaataagagaagctgtccgcaacaaatctgcaaaagatattggtgaaaatcagtttgatccaaagcttcttgatgcctttagggcagctctagcaggatctaaaactgaacctgtaaagaagctatcacagttagcactgaaggcaaggaagacaatgttggagaagggaaaagtacgcgagaatttaacaaagaaaatctatggaacatccaatggaagacgaaaacgtgcatgggaccgggactgtcaaattgaattttggaagcatcgttgcattggagagcctgaaaagattgagactttaaagtcagttcttggccttctcaatgggagttcacagggttcagatacaaagcatgagtctgatatgcagtccacaagtccaattctttccaggttgtatttagcagatacatctgtatttccaaggaaagataatattaagcctcttctagctcttaaagctgctggtaattctgagcagaatgataaacaacccaccgcaatggaactgtgttcaaagccttctcttgataatgtcacttcgacttccacagaaacgactaaggtttcatcaaaagttggggttcctttattagaaactaatgggaataaaaacaatcctccaagctcagacaatagtgctgcttctaacaaaggacatcaagatagacactcagaagggtccttggtttcttcatctggtggttctaaattgaaaaccaagaaggatgtagttgataaaactggtgatataaaagttgataaaaggaaatgggctctggaggttcttgcccggaaaatgagtggtacaggcaggaacacaacaaatgaaaaaaaggaaggcaactctgtgctcaaaggaaattaccctttgctagctcagttaccaatagacatgaaaccagttttgtcgcccagtcgtcacaataaagttccaatgtcagtgaggcagacgcagctataccgtctgacagagcacttgctgaggaaagctaatctgcctgtgattcgtagaactgcgaacacggagttagctgttgcagatgcaattaatatagaaaaggagattgcggataggtcaaacagcaagctagtttatctgaatctatgttcccaggagatgttgcatctttcaagaggtaacaaagctagtggaaccccagttcttagttcctccccatcttcagtccatgctgatagatcaggtgaagctgtgcatgaaccttcaactgatcctgtaactgaagaagcactgagaaatgctggtcttctgtccgattctcctccaaacagtccacgttccaatatggaagttcctgctgaagaagatgatccctcattagatttcagagaggaagggcctgataatgtatttgaaatggatgaaaatccagatctggacatctatggtgattttgagtataatctggaagatgaagactatattggtgccactgctacaaaagtctcgaatgtacagccagaggaaggggcatcaaaaattaaagttgttttctctacttttcagcctgaaacaactaatcaaactttagatcttggaagtactgagaaggtggttgaagtacaaaaagattcttcctgcatgctcaagaatgatacttattcaggtctggaaaattcaaccagggagtgtgagactgacaagtcttgtgttccattggaatccatatttggtaaagaaggtgaagagctttctgttgcagaatgtgaagaattatatggaccagatacagaaccagtgatcaagaaatttccagaagcatcagaaattctatatggatcaatagattcaggtttggttaaagacaactatccaaaagagaatgaaagttgtggaccaaagccaaccgaagaaataacatctccatctggtaatgagaaccatgcaaaaaatatatcagttgctagtcttggttgcacttcctctggtggagaagattcaacaaaccattcccaaccagatggaagtggtgaaaggaagaagaaatccaatacggattcaaaagatcagtccaacagcatcaattctatatccaagaaggttgaagcctacatcaaagagcatatcagaccactatgcaagagcggtgtgattacaactgaacaatataagtgggctgtggcgaaaacaactgagaaagtcatgaaataccattctaaagccaagagcgcaagtttcctcatcaaagaaggggagaaggtgaagaaacttgcagagcagtatgttgagacatcccaaaagaaggagaaaggtgaccctttataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
EloA-BP1 PHD zf-C3HC4_2 zf-RING_2

Protein Analysis

1234

Amino Acids

135.08

Weight (kDa)

5.42

Isoelectric Point (pI)

43.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-RING_2 PF13639 35 - 75 8.9e-07 Ring finger domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 3703
AasI GACNNNNNNGTC 2 cut(s) 1720, 3082
AccB1I GGYRCC 1 cut(s) 2867
AccBSI CCGCTC 1 cut(s) 3525
AccII CGCG 1 cut(s) 1593
AciI CCGC 5 cut(s) 215, 1432, 1917, 2489, 3525
AclI AACGTT 1 cut(s) 525
AclWI GGATC 6 cut(s) 287, 1466, 1519, 2645, 2744, 3226
AcsI RAATTY 8 cut(s) 10, 27, 230, 1597, 1670, 3055, 3188, 3207
AcuI CTGAAG 9 cut(s) 585, 594, 652, 912, 932, 1574, 2586, 2682, 2760
AfiI CCNNNNNNNGG 3 cut(s) 589, 2906, 3682
AflII CTTAAG 2 cut(s) 704, 1067
AflIII ACRYGT 2 cut(s) 104, 245
AjnI CCWGG 3 cut(s) 1808, 2532, 3062
AjuI GAANNNNNNNTTGG 8 cut(s) 30, 62, 1556, 1588, 2847, 2879, 3093, 3125
AloI GAACNNNNNNTCC 2 cut(s) 2565, 2597
Alw21I GWGCWC 2 cut(s) 2274, 2397
Alw26I GTCTC 7 cut(s) 349, 490, 1396, 1706, 2890, 3068, 3662
AlwI GGATC 6 cut(s) 287, 1466, 1519, 2645, 2744, 3226
AlwNI CAGNNNCTG 2 cut(s) 572, 1160
AoxI GGCC 5 cut(s) 192, 751, 1291, 1732, 2777
ApeKI GCWGC 7 cut(s) 153, 700, 916, 1499, 1880, 2060, 2374
ApoI RAATTY 8 cut(s) 10, 27, 230, 1597, 1670, 3055, 3188, 3207
ArsI GACNNNNNNTTYG 6 cut(s) 1256, 1288, 1760, 1792, 3434, 3466
AseI ATTAAT 1 cut(s) 2469
AspLEI GCGC 1 cut(s) 3611
AspS9I GGNCC 8 cut(s) 192, 1132, 1292, 1651, 2100, 2777, 3161, 3275
AsuC2I CCSGG 2 cut(s) 1655, 2212
AsuII TTCGAA 1 cut(s) 1255
AsuNHI GCTAGC 1 cut(s) 2293
AvaII GGWCC 5 cut(s) 1132, 1651, 2100, 3161, 3275
BaeI ACNNNNGTAYC 2 cut(s) 1818, 1851
BanI GGYRCC 1 cut(s) 2867
BanII GRGCYC 1 cut(s) 2197
BauI CACGAG 1 cut(s) 584
BbsI GAAGAC 5 cut(s) 1266, 1571, 1639, 2678, 2862
Bbv12I GWGCWC 2 cut(s) 2274, 2397
BbvCI CCTCAGC 2 cut(s) 1371, 2402
BbvI GCAGC 7 cut(s) 140, 712, 928, 1511, 1867, 2047, 2386
BccI CCATC 8 cut(s) 304, 361, 743, 1022, 1094, 2605, 3313, 3395
BciT130I CCWGG 3 cut(s) 1810, 2534, 3064
BciVI GTATCC 2 cut(s) 115, 418
BclI TGATCA 2 cut(s) 240, 3180
BcnI CCSGG 2 cut(s) 1655, 2212
BcoDI GTCTC 7 cut(s) 349, 490, 1396, 1706, 2890, 3068, 3662
BfaI CTAG 8 cut(s) 972, 1335, 1505, 1868, 2294, 2510, 2568, 3345
BfmI CTRYAG 1 cut(s) 1182
BfrI CTTAAG 2 cut(s) 704, 1067
BfuI GTATCC 2 cut(s) 115, 418
BglI GCCNNNNNGGC 1 cut(s) 1496
BglII AGATCT 3 cut(s) 907, 2812, 2971
BisI GCNGC 7 cut(s) 154, 701, 917, 1500, 1881, 2061, 2375
BlsI GCNGC 7 cut(s) 155, 702, 918, 1501, 1882, 2062, 2376
BmcAI AGTACT 2 cut(s) 715, 2983
Bme1390I CCNGG 5 cut(s) 1655, 1810, 2212, 2534, 3064
Bme18I GGWCC 5 cut(s) 1132, 1651, 2100, 3161, 3275
BmgT120I GGNCC 8 cut(s) 192, 1132, 1292, 1651, 2100, 2777, 3161, 3275
BmiI GGNNCC 6 cut(s) 1171, 1652, 2004, 2101, 2575, 2869
BmrFI CCNGG 5 cut(s) 1655, 1810, 2212, 2534, 3064
BmrI ACTGGG 2 cut(s) 2328, 2573
BmtI GCTAGC 1 cut(s) 2297
BmuI ACTGGG 2 cut(s) 2328, 2573
BpiI GAAGAC 5 cut(s) 1266, 1571, 1639, 2678, 2862
BpmI CTGGAG 2 cut(s) 1156, 2219
Bpu10I CCTNAGC 3 cut(s) 1062, 1371, 2402
Bpu14I TTCGAA 1 cut(s) 1255
BpuEI CTTGAG 1 cut(s) 3011
BpuMI CCSGG 2 cut(s) 1655, 2212
Bsa29I ATCGAT 1 cut(s) 132
BsaBI GATNNNNATC 2 cut(s) 291, 2805
BsaJI CCNNGG 6 cut(s) 1128, 1278, 1841, 2103, 2532, 3063
BsaWI WCCGGW 3 cut(s) 253, 881, 964
Bsc4I CCNNNNNNNGG 3 cut(s) 589, 2906, 3682
Bse3DI GCAATG 1 cut(s) 1926
Bse8I GATNNNNATC 2 cut(s) 291, 2805
BseBI CCWGG 3 cut(s) 1810, 2534, 3064
BseCI ATCGAT 1 cut(s) 132
BseDI CCNNGG 6 cut(s) 1128, 1278, 1841, 2103, 2532, 3063
BseGI GGATG 8 cut(s) 292, 336, 973, 1213, 1622, 2152, 2806, 3671
BseJI GATNNNNATC 2 cut(s) 291, 2805
BseLI CCNNNNNNNGG 3 cut(s) 589, 2906, 3682
BseMI GCAATG 1 cut(s) 1926
BseRI GAGGAG 2 cut(s) 1375, 2691
BseXI GCAGC 7 cut(s) 140, 712, 928, 1511, 1867, 2047, 2386
Bsh1236I CGCG 1 cut(s) 1593
BshFI GGCC 5 cut(s) 194, 753, 1293, 1734, 2779
BshNI GGYRCC 1 cut(s) 2867
BshVI ATCGAT 1 cut(s) 132
BsiHKAI GWGCWC 2 cut(s) 2274, 2397
BsiSI CCGG 5 cut(s) 254, 882, 965, 1654, 2212
BslFI GGGAC 3 cut(s) 631, 1664, 1670
BslI CCNNNNNNNGG 3 cut(s) 589, 2906, 3682
BsmAI GTCTC 7 cut(s) 349, 490, 1396, 1706, 2890, 3068, 3662
BsmFI GGGAC 3 cut(s) 631, 1664, 1670
BsnI GGCC 5 cut(s) 194, 753, 1293, 1734, 2779
Bsp119I TTCGAA 1 cut(s) 1255
Bsp1286I GDGCHC 3 cut(s) 2197, 2274, 2397
Bsp1407I TGTACA 1 cut(s) 2893
BspACI CCGC 5 cut(s) 215, 1432, 1917, 2489, 3525
BspANI GGCC 5 cut(s) 194, 753, 1293, 1734, 2779
BspDI ATCGAT 1 cut(s) 132
BspFNI CGCG 1 cut(s) 1593
BspHI TCATGA 1 cut(s) 3582
BspLI GGNNCC 6 cut(s) 1171, 1652, 2004, 2101, 2575, 2869
BspOI GCTAGC 1 cut(s) 2297
BspPI GGATC 6 cut(s) 287, 1466, 1519, 2645, 2744, 3226
BspQI GCTCTTC 1 cut(s) 3120
BspT104I TTCGAA 1 cut(s) 1255
BspT107I GGYRCC 1 cut(s) 2867
BspTI CTTAAG 2 cut(s) 704, 1067
BsrBI CCGCTC 1 cut(s) 3525
BsrDI GCAATG 1 cut(s) 1926
BsrGI TGTACA 1 cut(s) 2893
BssECI CCNNGG 6 cut(s) 1128, 1278, 1841, 2103, 2532, 3063
BssSI CACGAG 1 cut(s) 584
BssT1I CCWWGG 4 cut(s) 1128, 1278, 1841, 2103
Bst2BI CACGAG 1 cut(s) 584
Bst2UI CCWGG 3 cut(s) 1810, 2534, 3064
Bst6I CTCTTC 2 cut(s) 1869, 3120
BstAFI CTTAAG 2 cut(s) 704, 1067
BstAPI GCANNNNNTGC 1 cut(s) 1020
BstAUI TGTACA 1 cut(s) 2893
BstBI TTCGAA 1 cut(s) 1255
BstC8I GCNNGC 8 cut(s) 158, 178, 215, 1287, 1291, 2295, 2507, 3023
BstEII GGTNACC 1 cut(s) 3692
BstF5I GGATG 8 cut(s) 292, 336, 973, 1213, 1622, 2152, 2806, 3671
BstFNI CGCG 1 cut(s) 1593
BstHHI GCGC 1 cut(s) 3611
BstMAI GTCTC 7 cut(s) 349, 490, 1396, 1706, 2890, 3068, 3662
BstNI CCWGG 3 cut(s) 1810, 2534, 3064
BstNSI RCATGY 3 cut(s) 180, 249, 3025
BstPI GGTNACC 1 cut(s) 3692
BstSCI CCNGG 5 cut(s) 1653, 1808, 2210, 2532, 3062
BstSFI CTRYAG 1 cut(s) 1182
BstUI CGCG 1 cut(s) 1593
BstV1I GCAGC 7 cut(s) 140, 712, 928, 1511, 1867, 2047, 2386
BstV2I GAAGAC 5 cut(s) 1266, 1571, 1639, 2678, 2862
BstX2I RGATCY 4 cut(s) 907, 1511, 2812, 2971
BstXI CCANNNNNNTGG 2 cut(s) 1921, 3401
BstYI RGATCY 4 cut(s) 907, 1511, 2812, 2971
Bsu15I ATCGAT 1 cut(s) 132
BsuI GTATCC 2 cut(s) 115, 418
BsuRI GGCC 5 cut(s) 194, 753, 1293, 1734, 2779
BsuTUI ATCGAT 1 cut(s) 132
BtsCI GGATG 8 cut(s) 292, 336, 973, 1213, 1622, 2152, 2806, 3671
BtsI GCAGTG 2 cut(s) 1030, 2871
BtsIMutI CAGTG 9 cut(s) 160, 339, 557, 1030, 1550, 2367, 2669, 2871, 3183
Cac8I GCNNGC 8 cut(s) 158, 178, 215, 1287, 1291, 2295, 2507, 3023
CaiI CAGNNNCTG 2 cut(s) 572, 1160
CciI TCATGA 1 cut(s) 3582
CfoI GCGC 1 cut(s) 3611
Cfr13I GGNCC 8 cut(s) 192, 1132, 1292, 1651, 2100, 2777, 3161, 3275
ClaI ATCGAT 1 cut(s) 132
CseI GACGC 1 cut(s) 2380
CspCI CAANNNNNGTGG 4 cut(s) 2551, 2586, 3533, 3568
DraI TTTAAA 1 cut(s) 1719
DrdI GACNNNNNNGTC 2 cut(s) 1720, 3082
DseDI GACNNNNNNGTC 2 cut(s) 1720, 3082
Eam1104I CTCTTC 2 cut(s) 1869, 3120
EarI CTCTTC 2 cut(s) 1869, 3120
Eco130I CCWWGG 4 cut(s) 1128, 1278, 1841, 2103
Eco24I GRGCYC 1 cut(s) 2197
Eco47I GGWCC 5 cut(s) 1132, 1651, 2100, 3161, 3275
Eco57I CTGAAG 9 cut(s) 585, 594, 652, 912, 932, 1574, 2586, 2682, 2760
Eco91I GGTNACC 1 cut(s) 3692
EcoO109I RGGNCCY 3 cut(s) 1292, 2100, 2777
EcoO65I GGTNACC 1 cut(s) 3692
EcoRI GAATTC 1 cut(s) 27
EcoRII CCWGG 3 cut(s) 1808, 2532, 3062
EcoT14I CCWWGG 4 cut(s) 1128, 1278, 1841, 2103
EcoT22I ATGCAT 1 cut(s) 182
EcoT38I GRGCYC 1 cut(s) 2197
ErhI CCWWGG 4 cut(s) 1128, 1278, 1841, 2103
FalI AAGNNNNNCTT 2 cut(s) 1134, 1166
FaqI GGGAC 3 cut(s) 631, 1664, 1670
FauI CCCGC 1 cut(s) 222
FbaI TGATCA 2 cut(s) 240, 3180
Fnu4HI GCNGC 7 cut(s) 154, 701, 917, 1500, 1881, 2061, 2375
FokI GGATG 8 cut(s) 299, 343, 980, 1200, 1609, 2159, 2813, 3658
FriOI GRGCYC 1 cut(s) 2197
Fsp4HI GCNGC 7 cut(s) 154, 701, 917, 1500, 1881, 2061, 2375
FspBI CTAG 8 cut(s) 972, 1335, 1505, 1868, 2294, 2510, 2568, 3345
GlaI GCGC 1 cut(s) 3610
GluI GCNGC 7 cut(s) 154, 701, 917, 1500, 1881, 2061, 2375
GsuI CTGGAG 2 cut(s) 1156, 2219
HaeIII GGCC 5 cut(s) 194, 753, 1293, 1734, 2779
HapII CCGG 5 cut(s) 254, 882, 965, 1654, 2212
HgaI GACGC 1 cut(s) 2380
HhaI GCGC 1 cut(s) 3611
Hin6I GCGC 1 cut(s) 3609
HinP1I GCGC 1 cut(s) 3609
HincII GTYRAC 2 cut(s) 55, 868
HindII GTYRAC 2 cut(s) 55, 868
HindIII AAGCTT 3 cut(s) 773, 1064, 1478
HpaI GTTAAC 1 cut(s) 55
HpaII CCGG 5 cut(s) 254, 882, 965, 1654, 2212
Hpy166II GTNNAC 7 cut(s) 55, 674, 868, 1751, 1791, 2714, 3275
Hpy8I GTNNAC 7 cut(s) 55, 674, 868, 1751, 1791, 2714, 3275
HpyCH4IV ACGT 4 cut(s) 104, 525, 1642, 2716
HpySE526I ACGT 4 cut(s) 104, 525, 1642, 2716
HspAI GCGC 1 cut(s) 3609
Ksp22I TGATCA 2 cut(s) 240, 3180
KspAI GTTAAC 1 cut(s) 55
LguI GCTCTTC 1 cut(s) 3120
LmnI GCTCC 3 cut(s) 273, 988, 1175
Lsp1109I GCAGC 7 cut(s) 140, 712, 928, 1511, 1867, 2047, 2386
MaeI CTAG 8 cut(s) 972, 1335, 1505, 1868, 2294, 2510, 2568, 3345
MaeII ACGT 4 cut(s) 104, 525, 1642, 2716
MaeIII GTNAC 7 cut(s) 467, 1954, 2301, 2339, 2558, 2656, 3692
MbiI CCGCTC 1 cut(s) 3525
MfeI CAATTG 1 cut(s) 187
MflI RGATCY 4 cut(s) 907, 1511, 2812, 2971
MhlI GDGCHC 3 cut(s) 2197, 2274, 2397
MlyI GAGTC 3 cut(s) 596, 1151, 1784
MmeI TCCRAC 4 cut(s) 475, 570, 1554, 3477
Mph1103I ATGCAT 1 cut(s) 182
MslI CAYNNNNRTG 1 cut(s) 1919
MspA1I CMGCKG 1 cut(s) 476
MspCI CTTAAG 2 cut(s) 704, 1067
MspI CCGG 5 cut(s) 254, 882, 965, 1654, 2212
MspR9I CCNGG 5 cut(s) 1655, 1810, 2212, 2534, 3064
MunI CAATTG 1 cut(s) 187
MvaI CCWGG 3 cut(s) 1810, 2534, 3064
MvnI CGCG 1 cut(s) 1593
NciI CCSGG 2 cut(s) 1655, 2212
NheI GCTAGC 1 cut(s) 2293
NlaIV GGNNCC 6 cut(s) 1171, 1652, 2004, 2101, 2575, 2869
NmuCI GTSAC 4 cut(s) 467, 1954, 2339, 3692
NsiI ATGCAT 1 cut(s) 182
NspI RCATGY 3 cut(s) 180, 249, 3025
NspV TTCGAA 1 cut(s) 1255
PaeI GCATGC 2 cut(s) 180, 3025
PagI TCATGA 1 cut(s) 3582
PciI ACATGT 1 cut(s) 245
PciSI GCTCTTC 1 cut(s) 3120
PkrI GCNGC 7 cut(s) 155, 702, 918, 1501, 1882, 2062, 2376
PleI GAGTC 3 cut(s) 595, 1151, 1783
PpsI GAGTC 3 cut(s) 595, 1151, 1783
PpuMI RGGWCCY 1 cut(s) 2100
PscI ACATGT 1 cut(s) 245
PshBI ATTAAT 1 cut(s) 2469
PsiI TTATAA 1 cut(s) 3703
Psp1406I AACGTT 1 cut(s) 525
Psp5II RGGWCCY 1 cut(s) 2100
Psp6I CCWGG 3 cut(s) 1808, 2532, 3062
PspEI GGTNACC 1 cut(s) 3692
PspGI CCWGG 3 cut(s) 1808, 2532, 3062
PspN4I GGNNCC 6 cut(s) 1171, 1652, 2004, 2101, 2575, 2869
PspPI GGNCC 8 cut(s) 192, 1132, 1292, 1651, 2100, 2777, 3161, 3275
PspPPI RGGWCCY 1 cut(s) 2100
PstNI CAGNNNCTG 2 cut(s) 572, 1160
PsuI RGATCY 4 cut(s) 907, 1511, 2812, 2971
PvuII CAGCTG 1 cut(s) 476
RseI CAYNNNNRTG 1 cut(s) 1919
SapI GCTCTTC 1 cut(s) 3120
SatI GCNGC 7 cut(s) 154, 701, 917, 1500, 1881, 2061, 2375
Sau96I GGNCC 8 cut(s) 192, 1132, 1292, 1651, 2100, 2777, 3161, 3275
ScaI AGTACT 2 cut(s) 715, 2983
SchI GAGTC 3 cut(s) 596, 1151, 1784
ScrFI CCNGG 5 cut(s) 1655, 1810, 2212, 2534, 3064
SduI GDGCHC 3 cut(s) 2197, 2274, 2397
SfcI CTRYAG 1 cut(s) 1182
SfuI TTCGAA 1 cut(s) 1255
SinI GGWCC 5 cut(s) 1132, 1651, 2100, 3161, 3275
SmiMI CAYNNNNRTG 1 cut(s) 1919
SmlI CTYRAG 3 cut(s) 704, 1067, 3026
SmoI CTYRAG 3 cut(s) 704, 1067, 3026
SphI GCATGC 2 cut(s) 180, 3025
SsiI CCGC 5 cut(s) 215, 1432, 1917, 2489, 3525
SspI AATATT 3 cut(s) 938, 1242, 1855
SspMI CTAG 8 cut(s) 972, 1335, 1505, 1868, 2294, 2510, 2568, 3345
StyD4I CCNGG 5 cut(s) 1653, 1808, 2210, 2532, 3062
StyI CCWWGG 4 cut(s) 1128, 1278, 1841, 2103
TaiI ACGT 4 cut(s) 107, 528, 1645, 2719
TaqI TCGA 6 cut(s) 132, 183, 710, 1255, 1961, 2888
TatI WGTACW 5 cut(s) 713, 1219, 2893, 2981, 3001
TscAI CASTG 9 cut(s) 167, 346, 564, 1030, 1557, 2367, 2676, 2878, 3183
TseFI GTSAC 4 cut(s) 467, 1954, 2339, 3692
TseI GCWGC 7 cut(s) 153, 700, 916, 1499, 1880, 2060, 2374
Tsp45I GTSAC 4 cut(s) 467, 1954, 2339, 3692
TspGWI ACGGA 2 cut(s) 2459, 3449
TspRI CASTG 9 cut(s) 167, 346, 564, 1030, 1557, 2367, 2676, 2878, 3183
Vha464I CTTAAG 2 cut(s) 704, 1067
VpaK11BI GGWCC 5 cut(s) 1132, 1651, 2100, 3161, 3275
VspI ATTAAT 1 cut(s) 2469
XapI RAATTY 8 cut(s) 10, 27, 230, 1597, 1670, 3055, 3188, 3207
XceI RCATGY 3 cut(s) 180, 249, 3025
XspI CTAG 8 cut(s) 972, 1335, 1505, 1868, 2294, 2510, 2568, 3345
ZrmI AGTACT 2 cut(s) 715, 2983
Zsp2I ATGCAT 1 cut(s) 182
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.