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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G55280 AT1G55280 |
| fragaria_vesca | FvH4_3g45230 |
| malus_domestica | MD03G1007100.v1.1 |
| prunus_persica | Prupe.6G006700_v2.0.a1 |
| pyrus_communis | pycom03g00720 |
| rosa_chinensis | RchiOBHm_Chr5g0082841 |
| rosa_laevigata | RLG00000036994 |
| rosa_multiflora | Rmu_sc0001381.1_g000013 Rmu_sc0007172.1_g000002 |
| rosa_roxburghii | Rroxscaffold_1G00001590 |
| rosa_rugosa | Rorug05G0480300 |
| rosa_samantha | Rh5AG530600 Rh5AG530700 Rh5BG557600 Rh5CG580600 Rh5DG565900 |
| rosa_wichuraiana | Rw5G049800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1190, 1832 |
| AccII | CGCG | 1 cut(s) | 1595 |
| AciI | CCGC | 1 cut(s) | 1595 |
| AclWI | GGATC | 1 cut(s) | 656 |
| AcoI | YGGCCR | 1 cut(s) | 262 |
| AcsI | RAATTY | 2 cut(s) | 19, 532 |
| AfaI | GTAC | 3 cut(s) | 430, 1006, 1648 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 195, 626, 781, 1190, 1201, 1423, 1832, 1843 |
| AflII | CTTAAG | 1 cut(s) | 157 |
| AgsI | TTSAA | 8 cut(s) | 7, 272, 450, 584, 638, 659, 961, 1603 |
| AhlI | ACTAGT | 1 cut(s) | 431 |
| AleI | CACNNNNGTG | 1 cut(s) | 338 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1589, 1621 |
| Alw26I | GTCTC | 3 cut(s) | 120, 458, 532 |
| AlwI | GGATC | 1 cut(s) | 656 |
| AoxI | GGCC | 7 cut(s) | 34, 262, 664, 1181, 1192, 1823, 1834 |
| ApeKI | GCWGC | 1 cut(s) | 1970 |
| ApoI | RAATTY | 2 cut(s) | 19, 532 |
| AspS9I | GGNCC | 1 cut(s) | 617 |
| AsuHPI | GGTGA | 6 cut(s) | 236, 598, 835, 862, 1477, 1504 |
| AsuNHI | GCTAGC | 1 cut(s) | 13 |
| AvaII | GGWCC | 1 cut(s) | 617 |
| BaeI | ACNNNNGTAYC | 6 cut(s) | 348, 381, 996, 1029, 1638, 1671 |
| BbvCI | CCTCAGC | 2 cut(s) | 780, 1422 |
| BbvI | GCAGC | 1 cut(s) | 1982 |
| BccI | CCATC | 6 cut(s) | 728, 1103, 1282, 1370, 1745, 1924 |
| BceAI | ACGGC | 2 cut(s) | 249, 1542 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 449, 483 |
| BciVI | GTATCC | 1 cut(s) | 516 |
| BcoDI | GTCTC | 3 cut(s) | 120, 458, 532 |
| BcuI | ACTAGT | 1 cut(s) | 431 |
| BfaI | CTAG | 3 cut(s) | 14, 425, 432 |
| BfmI | CTRYAG | 3 cut(s) | 515, 1094, 1736 |
| BfrI | CTTAAG | 1 cut(s) | 157 |
| BfuI | GTATCC | 1 cut(s) | 516 |
| BisI | GCNGC | 1 cut(s) | 1971 |
| BlsI | GCNGC | 1 cut(s) | 1972 |
| Bme18I | GGWCC | 1 cut(s) | 617 |
| BmgT120I | GGNCC | 1 cut(s) | 617 |
| BmiI | GGNNCC | 3 cut(s) | 618, 744, 1386 |
| BmsI | GCATC | 4 cut(s) | 973, 1025, 1615, 1667 |
| BmtI | GCTAGC | 1 cut(s) | 17 |
| Bpu10I | CCTNAGC | 2 cut(s) | 780, 1422 |
| BsaI | GGTCTC | 1 cut(s) | 532 |
| BsaJI | CCNNGG | 6 cut(s) | 816, 916, 1137, 1458, 1558, 1779 |
| BsaWI | WCCGGW | 1 cut(s) | 541 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 195, 626, 781, 1190, 1201, 1423, 1832, 1843 |
| Bse118I | RCCGGY | 2 cut(s) | 1040, 1682 |
| Bse1I | ACTGG | 3 cut(s) | 265, 996, 1638 |
| BseDI | CCNNGG | 6 cut(s) | 816, 916, 1137, 1458, 1558, 1779 |
| BseGI | GGATG | 8 cut(s) | 550, 571, 1016, 1252, 1293, 1658, 1894, 1935 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 195, 626, 781, 1190, 1201, 1423, 1832, 1843 |
| BseMII | CTCAG | 6 cut(s) | 131, 208, 761, 771, 1403, 1413 |
| BseNI | ACTGG | 3 cut(s) | 265, 996, 1638 |
| BseXI | GCAGC | 1 cut(s) | 1982 |
| BseYI | CCCAGC | 2 cut(s) | 1283, 1925 |
| BsgI | GTGCAG | 1 cut(s) | 334 |
| Bsh1236I | CGCG | 1 cut(s) | 1595 |
| BshFI | GGCC | 7 cut(s) | 36, 264, 666, 1183, 1194, 1825, 1836 |
| BsiSI | CCGG | 3 cut(s) | 542, 1041, 1683 |
| BslFI | GGGAC | 3 cut(s) | 630, 1235, 1877 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 195, 626, 781, 1190, 1201, 1423, 1832, 1843 |
| BsmAI | GTCTC | 3 cut(s) | 120, 458, 532 |
| BsmFI | GGGAC | 3 cut(s) | 630, 1235, 1877 |
| BsnI | GGCC | 7 cut(s) | 36, 264, 666, 1183, 1194, 1825, 1836 |
| Bso31I | GGTCTC | 1 cut(s) | 532 |
| Bsp143I | GATC | 2 cut(s) | 75, 648 |
| Bsp19I | CCATGG | 3 cut(s) | 816, 916, 1458 |
| BspACI | CCGC | 1 cut(s) | 1595 |
| BspANI | GGCC | 7 cut(s) | 36, 264, 666, 1183, 1194, 1825, 1836 |
| BspCNI | CTCAG | 6 cut(s) | 130, 207, 760, 772, 1402, 1414 |
| BspFNI | CGCG | 1 cut(s) | 1595 |
| BspLI | GGNNCC | 3 cut(s) | 618, 744, 1386 |
| BspMAI | CTGCAG | 2 cut(s) | 1098, 1740 |
| BspOI | GCTAGC | 1 cut(s) | 17 |
| BspPI | GGATC | 1 cut(s) | 656 |
| BspTI | CTTAAG | 1 cut(s) | 157 |
| BspTNI | GGTCTC | 1 cut(s) | 532 |
| BsrFI | RCCGGY | 2 cut(s) | 1040, 1682 |
| BsrI | ACTGG | 3 cut(s) | 265, 996, 1638 |
| BssAI | RCCGGY | 2 cut(s) | 1040, 1682 |
| BssECI | CCNNGG | 6 cut(s) | 816, 916, 1137, 1458, 1558, 1779 |
| BssMI | GATC | 2 cut(s) | 75, 648 |
| BssT1I | CCWWGG | 3 cut(s) | 816, 916, 1458 |
| Bst4CI | ACNGT | 4 cut(s) | 697, 1228, 1339, 1870 |
| Bst6I | CTCTTC | 2 cut(s) | 1172, 1814 |
| BstAFI | CTTAAG | 1 cut(s) | 157 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 173 |
| BstC8I | GCNNGC | 4 cut(s) | 15, 165, 330, 1306 |
| BstDEI | CTNAG | 8 cut(s) | 117, 194, 747, 780, 827, 1389, 1422, 1469 |
| BstDSI | CCRYGG | 6 cut(s) | 816, 916, 1137, 1458, 1558, 1779 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 193 |
| BstF5I | GGATG | 8 cut(s) | 550, 571, 1016, 1252, 1293, 1658, 1894, 1935 |
| BstFNI | CGCG | 1 cut(s) | 1595 |
| BstKTI | GATC | 2 cut(s) | 78, 651 |
| BstMAI | GTCTC | 3 cut(s) | 120, 458, 532 |
| BstMBI | GATC | 2 cut(s) | 75, 648 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 173, 1046, 1688 |
| BstNSI | RCATGY | 3 cut(s) | 167, 1308, 1950 |
| BstSFI | CTRYAG | 3 cut(s) | 515, 1094, 1736 |
| BstUI | CGCG | 1 cut(s) | 1595 |
| BstV1I | GCAGC | 1 cut(s) | 1982 |
| BsuI | GTATCC | 1 cut(s) | 516 |
| BsuRI | GGCC | 7 cut(s) | 36, 264, 666, 1183, 1194, 1825, 1836 |
| BtgI | CCRYGG | 6 cut(s) | 816, 916, 1137, 1458, 1558, 1779 |
| BtsCI | GGATG | 8 cut(s) | 550, 571, 1016, 1252, 1293, 1658, 1894, 1935 |
| BtsIMutI | CAGTG | 3 cut(s) | 369, 1233, 1875 |
| Cac8I | GCNNGC | 4 cut(s) | 15, 165, 330, 1306 |
| Cfr10I | RCCGGY | 2 cut(s) | 1040, 1682 |
| Cfr13I | GGNCC | 1 cut(s) | 617 |
| Csp6I | GTAC | 3 cut(s) | 429, 1005, 1647 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1119, 1154, 1761, 1796 |
| CviQI | GTAC | 3 cut(s) | 429, 1005, 1647 |
| DdeI | CTNAG | 8 cut(s) | 117, 194, 747, 780, 827, 1389, 1422, 1469 |
| DpnI | GATC | 2 cut(s) | 77, 650 |
| DpnII | GATC | 2 cut(s) | 75, 648 |
| EaeI | YGGCCR | 1 cut(s) | 262 |
| Eam1104I | CTCTTC | 2 cut(s) | 1172, 1814 |
| EarI | CTCTTC | 2 cut(s) | 1172, 1814 |
| Eco130I | CCWWGG | 3 cut(s) | 816, 916, 1458 |
| Eco147I | AGGCCT | 1 cut(s) | 36 |
| Eco31I | GGTCTC | 1 cut(s) | 532 |
| Eco32I | GATATC | 2 cut(s) | 924, 1566 |
| Eco47I | GGWCC | 1 cut(s) | 617 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 193 |
| EcoO109I | RGGNCCY | 1 cut(s) | 617 |
| EcoRV | GATATC | 2 cut(s) | 924, 1566 |
| EcoT14I | CCWWGG | 3 cut(s) | 816, 916, 1458 |
| ErhI | CCWWGG | 3 cut(s) | 816, 916, 1458 |
| FaqI | GGGAC | 3 cut(s) | 630, 1235, 1877 |
| FauNDI | CATATG | 1 cut(s) | 27 |
| Fnu4HI | GCNGC | 1 cut(s) | 1971 |
| FokI | GGATG | 8 cut(s) | 557, 578, 1003, 1259, 1300, 1645, 1901, 1942 |
| Fsp4HI | GCNGC | 1 cut(s) | 1971 |
| FspBI | CTAG | 3 cut(s) | 14, 425, 432 |
| GluI | GCNGC | 1 cut(s) | 1971 |
| GsaI | CCCAGC | 2 cut(s) | 1287, 1929 |
| HaeIII | GGCC | 7 cut(s) | 36, 264, 666, 1183, 1194, 1825, 1836 |
| HapII | CCGG | 3 cut(s) | 542, 1041, 1683 |
| HincII | GTYRAC | 4 cut(s) | 862, 879, 1504, 1521 |
| HindII | GTYRAC | 4 cut(s) | 862, 879, 1504, 1521 |
| HindIII | AAGCTT | 1 cut(s) | 373 |
| HpaII | CCGG | 3 cut(s) | 542, 1041, 1683 |
| HphI | GGTGA | 6 cut(s) | 236, 598, 835, 862, 1477, 1504 |
| Hpy188I | TCNGA | 8 cut(s) | 130, 231, 292, 460, 797, 910, 1439, 1552 |
| Hpy188III | TCNNGA | 5 cut(s) | 79, 196, 656, 1124, 1766 |
| HpyAV | CCTTC | 4 cut(s) | 257, 324, 877, 1519 |
| HpyCH4III | ACNGT | 4 cut(s) | 697, 1228, 1339, 1870 |
| HpyCH4IV | ACGT | 1 cut(s) | 359 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 173, 1046, 1688 |
| HpyF3I | CTNAG | 8 cut(s) | 117, 194, 747, 780, 827, 1389, 1422, 1469 |
| HpySE526I | ACGT | 1 cut(s) | 359 |
| Kzo9I | GATC | 2 cut(s) | 75, 648 |
| LmnI | GCTCC | 2 cut(s) | 818, 1460 |
| Lsp1109I | GCAGC | 1 cut(s) | 1982 |
| LweI | GCATC | 4 cut(s) | 973, 1025, 1615, 1667 |
| MaeI | CTAG | 3 cut(s) | 14, 425, 432 |
| MaeII | ACGT | 1 cut(s) | 359 |
| MaeIII | GTNAC | 6 cut(s) | 87, 503, 806, 841, 1448, 1483 |
| MalI | GATC | 2 cut(s) | 77, 650 |
| MboI | GATC | 2 cut(s) | 75, 648 |
| MboII | GAAGA | 6 cut(s) | 1076, 1079, 1189, 1718, 1721, 1831 |
| MluCI | AATT | 6 cut(s) | 19, 532, 573, 1131, 1773, 1974 |
| MlyI | GAGTC | 1 cut(s) | 155 |
| MmeI | TCCRAC | 1 cut(s) | 483 |
| MseI | TTAA | 6 cut(s) | 158, 386, 612, 1055, 1697, 1977 |
| MslI | CAYNNNNRTG | 3 cut(s) | 71, 338, 1309 |
| MspCI | CTTAAG | 1 cut(s) | 157 |
| MspI | CCGG | 3 cut(s) | 542, 1041, 1683 |
| MvnI | CGCG | 1 cut(s) | 1595 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 173, 1046, 1688 |
| NcoI | CCATGG | 3 cut(s) | 816, 916, 1458 |
| NdeI | CATATG | 1 cut(s) | 27 |
| NdeII | GATC | 2 cut(s) | 75, 648 |
| NheI | GCTAGC | 1 cut(s) | 13 |
| NlaIV | GGNNCC | 3 cut(s) | 618, 744, 1386 |
| NmuCI | GTSAC | 4 cut(s) | 806, 841, 1448, 1483 |
| NspI | RCATGY | 3 cut(s) | 167, 1308, 1950 |
| OliI | CACNNNNGTG | 1 cut(s) | 338 |
| PaeI | GCATGC | 2 cut(s) | 167, 1308 |
| PceI | AGGCCT | 1 cut(s) | 36 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1190, 1832 |
| PkrI | GCNGC | 1 cut(s) | 1972 |
| PleI | GAGTC | 1 cut(s) | 154 |
| PpsI | GAGTC | 1 cut(s) | 154 |
| PpuMI | RGGWCCY | 1 cut(s) | 617 |
| Psp5II | RGGWCCY | 1 cut(s) | 617 |
| PspFI | CCCAGC | 2 cut(s) | 1283, 1925 |
| PspN4I | GGNNCC | 3 cut(s) | 618, 744, 1386 |
| PspPI | GGNCC | 1 cut(s) | 617 |
| PspPPI | RGGWCCY | 1 cut(s) | 617 |
| PstI | CTGCAG | 2 cut(s) | 1098, 1740 |
| RsaI | GTAC | 3 cut(s) | 430, 1006, 1648 |
| RsaNI | GTAC | 3 cut(s) | 429, 1005, 1647 |
| RseI | CAYNNNNRTG | 3 cut(s) | 71, 338, 1309 |
| SaqAI | TTAA | 6 cut(s) | 158, 386, 612, 1055, 1697, 1977 |
| SatI | GCNGC | 1 cut(s) | 1971 |
| Sau3AI | GATC | 2 cut(s) | 75, 648 |
| Sau96I | GGNCC | 1 cut(s) | 617 |
| SchI | GAGTC | 1 cut(s) | 155 |
| SfaNI | GCATC | 4 cut(s) | 973, 1025, 1615, 1667 |
| SfcI | CTRYAG | 3 cut(s) | 515, 1094, 1736 |
| SinI | GGWCC | 1 cut(s) | 617 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 71, 338, 1309 |
| SmlI | CTYRAG | 1 cut(s) | 157 |
| SmoI | CTYRAG | 1 cut(s) | 157 |
| SpeI | ACTAGT | 1 cut(s) | 431 |
| SphI | GCATGC | 2 cut(s) | 167, 1308 |
| Sse9I | AATT | 6 cut(s) | 19, 532, 573, 1131, 1773, 1974 |
| SseBI | AGGCCT | 1 cut(s) | 36 |
| SsiI | CCGC | 1 cut(s) | 1595 |
| SspMI | CTAG | 3 cut(s) | 14, 425, 432 |
| StuI | AGGCCT | 1 cut(s) | 36 |
| StyI | CCWWGG | 3 cut(s) | 816, 916, 1458 |
| TaaI | ACNGT | 4 cut(s) | 697, 1228, 1339, 1870 |
| TaiI | ACGT | 1 cut(s) | 362 |
| TaqI | TCGA | 5 cut(s) | 53, 78, 530, 762, 1404 |
| TasI | AATT | 6 cut(s) | 19, 532, 573, 1131, 1773, 1974 |
| Tru1I | TTAA | 6 cut(s) | 158, 386, 612, 1055, 1697, 1977 |
| Tru9I | TTAA | 6 cut(s) | 158, 386, 612, 1055, 1697, 1977 |
| TscAI | CASTG | 3 cut(s) | 369, 1233, 1875 |
| TseFI | GTSAC | 4 cut(s) | 806, 841, 1448, 1483 |
| TseI | GCWGC | 1 cut(s) | 1970 |
| Tsp45I | GTSAC | 4 cut(s) | 806, 841, 1448, 1483 |
| TspDTI | ATGAA | 6 cut(s) | 91, 306, 411, 561, 1190, 1832 |
| TspGWI | ACGGA | 3 cut(s) | 100, 1126, 1768 |
| TspRI | CASTG | 3 cut(s) | 369, 1233, 1875 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1190, 1832 |
| Vha464I | CTTAAG | 1 cut(s) | 157 |
| VpaK11BI | GGWCC | 1 cut(s) | 617 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 193 |
| XapI | RAATTY | 2 cut(s) | 19, 532 |
| XceI | RCATGY | 3 cut(s) | 167, 1308, 1950 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 994, 1636 |
| XspI | CTAG | 3 cut(s) | 14, 425, 432 |