Rmu_sc0001809.1_g000044

component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001809.1
OG0009536
Physical Location & Seq
Reverse (-)
225569 .. 231668
6100 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2175 bp
atggagataatcggcgacgcgcttcgccaggcgttcatgcccaagcgcgagtacgagagcctccgggaggaagacagagcgtgggggaagctccagaggcctgtgttgatggcgtccgtggctttcatctgcctttcaatcctcgtctgcgcgattatcagcttgaacattgtgtttccggccgacgcgaaccggcggccgttctgcggcgaccggaggcttaattcgctgccgatgaatgtcagaggcggcgattccgattccgattcgtttaatggtgcgttttatctgacggaccaggagactgtggattactattggatggtggtgttcattccctccatgatcattttcttggccacggtggtgtatcttgttgcgggaatcactgtcgcttattctgccccaacaaggaatggatgcttaatggtagttgaaaataactactgtgcttcaaaaagaggtggggtaagatgtctatcaattctgaatgctgtctttgctatcatatttggtcttcttgccttgtttcttggtacgagcctcctcacattagggggaagctactgctctgtgcctctattctggtgctatgagattggcacttgggggctcgtttttctgtacggagggactgccttcttcctgagaaggagagcagctgtaatccttgatgaaggggaatttggtggccgaaacttggggcttgaaatgttggagaatcccgtggaagtgacaccagacatggaaaggcgggttgaagaagggtttaaaacatggatggggtcatcactcctatcttccgatgaagaagatgaacctgggactaatcttgggcatcatattcctgaagcattgtcaagtgtctacatccgcgagaagaacgtgtatgagatccaccagatgtacgagacttcgttccagggcatatcggagcgcctcttcaaggacacgccgtggccgtccgtggacgccgtcgcgcaccacgtcgacaacgaccacgtgttctgcctgctataccgtgagatgtggttccgccacctctacgcgaggctccagccgacgctgaagcagagaatcgactcgtgggacaattactgtagcctttttcaggtggttctgcacggcgtggtcaatatgcagctgccgaatcagtggctgtgggacatggtggatgagtttgtgtaccagtttcagagcttctgtcagtatcgggctaagatgaagaacaagactgagcaggagattgctcttctcaggcagtttgatcaagcttggaatgtgtacggtgtgcttaactttttgcaagctctggtggagaagtctgcgattattcagattctcgagcatgagaaggaagggctggagcaattcactgccacggatgggtatgattatagtggcggcagtaatgtcttgaaggtgttggggtatttcagtatggtggggttgctgcgagtgcattgtcttttgggtgattatcatactggtctgaaatgcttgcaacccattgacattactcagcaaggtgtttacaccagtgtgattggtagccacattaccaccatatatcattatggttttgccaatcttatgttgcggaggtatgtggaggcaattcgtgaattcaataagattctactgtacatctataagaccaagcaatatcatcagaaatctcctcagtatgagcagatactaaagaagaatgagcagatgtatgcattgttggcaattagcctttcactatgtccccaggttaagcttgttgaagaaacagtgaattctcagttgcgtgagaagtatggtgaaaagatgattagaatgcaaagatatgatgatgaagcatttgctatctatgatgagctcttctcctatgcatgtcctaagttcattactccatctgctccaagttttgaggagcctcttgttaattacaaccaggatgcatacagacttcagttgaaacttttcctttatgaagtgaagcagcaacagttattatctggtgttaggaccttcttaaaagtctattcatccatctctcttgggaaccttgcgaagtacatggaagtggatgaatccaagttgaggactatcttgctgacatacaaacacaagacacatgcacttgaaggggcaatcaacgatctggacaggataaagctggattga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Paf67

Protein Analysis

724

Amino Acids

83.36

Weight (kDa)

5.75

Isoelectric Point (pI)

43.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Paf67 PF10255 358 - 712 8.2e-138 RNA polymerase I-associated factor PAF67
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 867, 990
AccII CGCG 7 cut(s) 20, 48, 152, 188, 876, 980, 1049
AciI CCGC 9 cut(s) 196, 207, 249, 380, 754, 874, 1036, 1404, 1600
AclWI GGATC 1 cut(s) 889
AcoI YGGCCR 5 cut(s) 180, 197, 357, 691, 959
AcsI RAATTY 3 cut(s) 683, 1625, 1783
AcuI CTGAAG 3 cut(s) 870, 1088, 1943
AcvI CACGTG 1 cut(s) 1003
AcyI GRCGYC 2 cut(s) 113, 972
AdeI CACNNNGTG 2 cut(s) 957, 1129
AfaI GTAC 8 cut(s) 53, 538, 626, 908, 1187, 1286, 1646, 2066
AfiI CCNNNNNNNGG 8 cut(s) 67, 206, 411, 700, 946, 1111, 1386, 2091
AflIII ACRYGT 2 cut(s) 885, 1002
AjiI CACGTC 1 cut(s) 988
AjnI CCWGG 6 cut(s) 27, 297, 820, 921, 1755, 1941
AjuI GAANNNNNNNTTGG 2 cut(s) 669, 701
AleI CACNNNNGTG 2 cut(s) 365, 1541
Alw21I GWGCWC 1 cut(s) 1869
Alw26I GTCTC 2 cut(s) 296, 905
AlwI GGATC 1 cut(s) 889
AlwNI CAGNNNCTG 1 cut(s) 1159
Ama87I CYCGRG 1 cut(s) 1343
AoxI GGCC 6 cut(s) 98, 180, 197, 357, 691, 959
ApeKI GCWGC 6 cut(s) 229, 659, 1141, 1144, 1453, 1990
ApoI RAATTY 3 cut(s) 683, 1625, 1783
Asp700I GAANNNNTTC 1 cut(s) 1970
AspLEI GCGC 5 cut(s) 22, 48, 152, 939, 982
AspS9I GGNCC 2 cut(s) 295, 2016
AsuC2I CCSGG 1 cut(s) 65
AsuHPI GGTGA 2 cut(s) 1487, 1820
AvaI CYCGRG 1 cut(s) 1343
AvaII GGWCC 2 cut(s) 295, 2016
BalI TGGCCA 1 cut(s) 359
BanII GRGCYC 2 cut(s) 615, 1869
BauI CACGAG 1 cut(s) 1084
BbrPI CACGTG 1 cut(s) 1003
BbsI GAAGAC 2 cut(s) 78, 509
Bbv12I GWGCWC 1 cut(s) 1869
BbvI GCAGC 6 cut(s) 216, 671, 1131, 1153, 1440, 2002
BccI CCATC 6 cut(s) 103, 316, 775, 1379, 1909, 2048
BceAI ACGGC 5 cut(s) 184, 940, 946, 959, 1141
BciT130I CCWGG 6 cut(s) 29, 299, 822, 923, 1757, 1943
BclI TGATCA 2 cut(s) 345, 1267
BcnI CCSGG 1 cut(s) 65
BcoDI GTCTC 2 cut(s) 296, 905
BfmI CTRYAG 1 cut(s) 1099
BfoI RGCGCY 1 cut(s) 940
Bme1390I CCNGG 7 cut(s) 29, 65, 299, 822, 923, 1757, 1943
Bme18I GGWCC 2 cut(s) 295, 2016
BmeT110I CYCGRG 1 cut(s) 1343
BmgBI CACGTC 1 cut(s) 988
BmgT120I GGNCC 2 cut(s) 295, 2016
BmiI GGNNCC 4 cut(s) 1034, 1055, 1923, 2054
BmrFI CCNGG 7 cut(s) 29, 65, 299, 822, 923, 1757, 1943
BmsI GCATC 3 cut(s) 410, 847, 1936
BpiI GAAGAC 2 cut(s) 78, 509
BplI GAGNNNNNCTC 2 cut(s) 1856, 1888
BpmI CTGGAG 3 cut(s) 77, 1040, 1385
BpuMI CCSGG 1 cut(s) 65
BsaAI YACGTR 1 cut(s) 1003
BsaBI GATNNNNATC 1 cut(s) 478
BsaHI GRCGYC 2 cut(s) 113, 972
BsaJI CCNNGG 9 cut(s) 117, 360, 726, 821, 922, 956, 966, 1380, 1755
BsaWI WCCGGW 1 cut(s) 213
Bsc4I CCNNNNNNNGG 8 cut(s) 67, 206, 411, 700, 946, 1111, 1386, 2091
Bse118I RCCGGY 1 cut(s) 192
Bse1I ACTGG 3 cut(s) 1189, 1492, 1539
Bse8I GATNNNNATC 1 cut(s) 478
BseBI CCWGG 6 cut(s) 29, 299, 822, 923, 1757, 1943
BseDI CCNNGG 9 cut(s) 117, 360, 726, 821, 922, 956, 966, 1380, 1755
BseGI GGATG 9 cut(s) 327, 425, 786, 870, 1180, 1390, 1951, 2036, 2083
BseJI GATNNNNATC 1 cut(s) 478
BseLI CCNNNNNNNGG 8 cut(s) 67, 206, 411, 700, 946, 1111, 1386, 2091
BseMII CTCAG 6 cut(s) 638, 1227, 1270, 1535, 1697, 1802
BseNI ACTGG 3 cut(s) 1189, 1492, 1539
BseRI GAGGAG 3 cut(s) 536, 1671, 1934
BseX3I CGGCCG 2 cut(s) 180, 197
BseXI GCAGC 6 cut(s) 216, 671, 1131, 1153, 1440, 2002
BsgI GTGCAG 1 cut(s) 1106
Bsh1236I CGCG 7 cut(s) 20, 48, 152, 188, 876, 980, 1049
Bsh1285I CGRYCG 3 cut(s) 183, 200, 214
BshFI GGCC 6 cut(s) 100, 182, 199, 359, 693, 961
BsiEI CGRYCG 3 cut(s) 183, 200, 214
BsiHKAI GWGCWC 1 cut(s) 1869
BsiHKCI CYCGRG 1 cut(s) 1343
BsiSI CCGG 4 cut(s) 64, 179, 193, 214
BslFI GGGAC 5 cut(s) 646, 838, 1103, 1178, 1737
BslI CCNNNNNNNGG 8 cut(s) 67, 206, 411, 700, 946, 1111, 1386, 2091
BsmAI GTCTC 2 cut(s) 296, 905
BsmFI GGGAC 5 cut(s) 646, 838, 1103, 1178, 1737
BsmI GAATGC 2 cut(s) 496, 1830
BsnI GGCC 6 cut(s) 100, 182, 199, 359, 693, 961
BsoBI CYCGRG 1 cut(s) 1343
Bsp1286I GDGCHC 2 cut(s) 615, 1869
Bsp1407I TGTACA 1 cut(s) 1644
Bsp143I GATC 4 cut(s) 345, 894, 1267, 2149
BspACI CCGC 9 cut(s) 196, 207, 249, 380, 754, 874, 1036, 1404, 1600
BspANI GGCC 6 cut(s) 100, 182, 199, 359, 693, 961
BspCNI CTCAG 6 cut(s) 639, 1228, 1269, 1534, 1696, 1801
BspFNI CGCG 7 cut(s) 20, 48, 152, 188, 876, 980, 1049
BspLI GGNNCC 4 cut(s) 1034, 1055, 1923, 2054
BspPI GGATC 1 cut(s) 889
BspQI GCTCTTC 2 cut(s) 1257, 1874
BsrFI RCCGGY 1 cut(s) 192
BsrGI TGTACA 1 cut(s) 1644
BsrI ACTGG 3 cut(s) 1189, 1492, 1539
BssAI RCCGGY 1 cut(s) 192
BssECI CCNNGG 9 cut(s) 117, 360, 726, 821, 922, 956, 966, 1380, 1755
BssMI GATC 4 cut(s) 345, 894, 1267, 2149
BssNI GRCGYC 2 cut(s) 113, 972
BssSI CACGAG 1 cut(s) 1084
Bst2BI CACGAG 1 cut(s) 1084
Bst2UI CCWGG 6 cut(s) 29, 299, 822, 923, 1757, 1943
Bst6I CTCTTC 3 cut(s) 947, 1257, 1874
BstACI GRCGYC 2 cut(s) 113, 972
BstAUI TGTACA 1 cut(s) 1644
BstBAI YACGTR 1 cut(s) 1003
BstC8I GCNNGC 3 cut(s) 1013, 1308, 1502
BstDEI CTNAG 8 cut(s) 647, 1218, 1236, 1256, 1521, 1683, 1788, 1887
BstDSI CCRYGG 6 cut(s) 117, 360, 726, 956, 966, 1380
BstENI CCTNNNNNAGG 3 cut(s) 65, 944, 1109
BstF5I GGATG 9 cut(s) 327, 425, 786, 870, 1180, 1390, 1951, 2036, 2083
BstFNI CGCG 7 cut(s) 20, 48, 152, 188, 876, 980, 1049
BstH2I RGCGCY 1 cut(s) 940
BstHHI GCGC 5 cut(s) 22, 48, 152, 939, 982
BstKTI GATC 4 cut(s) 348, 897, 1270, 2152
BstMAI GTCTC 2 cut(s) 296, 905
BstMBI GATC 4 cut(s) 345, 894, 1267, 2149
BstMCI CGRYCG 3 cut(s) 183, 200, 214
BstMWI GCNNNNNNNGC 7 cut(s) 97, 119, 226, 401, 500, 1459, 1730
BstNI CCWGG 6 cut(s) 29, 299, 822, 923, 1757, 1943
BstNSI RCATGY 2 cut(s) 1884, 2129
BstSCI CCNGG 7 cut(s) 27, 63, 297, 820, 921, 1755, 1941
BstSFI CTRYAG 1 cut(s) 1099
BstUI CGCG 7 cut(s) 20, 48, 152, 188, 876, 980, 1049
BstV1I GCAGC 6 cut(s) 216, 671, 1131, 1153, 1440, 2002
BstV2I GAAGAC 2 cut(s) 78, 509
BstX2I RGATCY 1 cut(s) 894
BstYI RGATCY 1 cut(s) 894
BstZI CGGCCG 2 cut(s) 180, 197
BsuRI GGCC 6 cut(s) 100, 182, 199, 359, 693, 961
BtgI CCRYGG 6 cut(s) 117, 360, 726, 956, 966, 1380
BtrI CACGTC 1 cut(s) 988
BtsCI GGATG 9 cut(s) 327, 425, 786, 870, 1180, 1390, 1951, 2036, 2083
BtsI GCAGTG 1 cut(s) 1374
BtsIMutI CAGTG 5 cut(s) 387, 1160, 1374, 1546, 1785
Cac8I GCNNGC 3 cut(s) 1013, 1308, 1502
CaiI CAGNNNCTG 1 cut(s) 1159
CfoI GCGC 5 cut(s) 22, 48, 152, 939, 982
Cfr10I RCCGGY 1 cut(s) 192
Cfr13I GGNCC 2 cut(s) 295, 2016
CseI GACGC 5 cut(s) 26, 102, 194, 980, 1072
Csp6I GTAC 8 cut(s) 52, 537, 625, 907, 1186, 1285, 1645, 2065
CviAII CATG 9 cut(s) 37, 343, 745, 777, 1168, 1349, 1881, 2068, 2126
CviQI GTAC 8 cut(s) 52, 537, 625, 907, 1186, 1285, 1645, 2065
DdeI CTNAG 8 cut(s) 647, 1218, 1236, 1256, 1521, 1683, 1788, 1887
DpnI GATC 4 cut(s) 347, 896, 1269, 2151
DpnII GATC 4 cut(s) 345, 894, 1267, 2149
DraI TTTAAA 1 cut(s) 772
DraIII CACNNNGTG 2 cut(s) 957, 1129
EaeI YGGCCR 5 cut(s) 180, 197, 357, 691, 959
EagI CGGCCG 2 cut(s) 180, 197
Eam1104I CTCTTC 3 cut(s) 947, 1257, 1874
EarI CTCTTC 3 cut(s) 947, 1257, 1874
EciI GGCGGA 1 cut(s) 1025
Ecl136II GAGCTC 1 cut(s) 1867
EclXI CGGCCG 2 cut(s) 180, 197
Eco147I AGGCCT 1 cut(s) 100
Eco24I GRGCYC 2 cut(s) 615, 1869
Eco47I GGWCC 2 cut(s) 295, 2016
Eco52I CGGCCG 2 cut(s) 180, 197
Eco53kI GAGCTC 1 cut(s) 1867
Eco57I CTGAAG 3 cut(s) 870, 1088, 1943
Eco72I CACGTG 1 cut(s) 1003
Eco88I CYCGRG 1 cut(s) 1343
EcoICRI GAGCTC 1 cut(s) 1867
EcoNI CCTNNNNNAGG 3 cut(s) 65, 944, 1109
EcoO109I RGGNCCY 1 cut(s) 2016
EcoRI GAATTC 2 cut(s) 1625, 1783
EcoRII CCWGG 6 cut(s) 27, 297, 820, 921, 1755, 1941
EcoT22I ATGCAT 3 cut(s) 1726, 1882, 1951
EcoT38I GRGCYC 2 cut(s) 615, 1869
FaeI CATG 9 cut(s) 40, 346, 748, 780, 1171, 1352, 1884, 2071, 2129
FaqI GGGAC 5 cut(s) 646, 838, 1103, 1178, 1737
FatI CATG 9 cut(s) 36, 342, 744, 776, 1167, 1348, 1880, 2067, 2125
FauI CCCGC 2 cut(s) 373, 747
FbaI TGATCA 2 cut(s) 345, 1267
FblI GTMKAC 2 cut(s) 867, 990
FokI GGATG 9 cut(s) 334, 432, 793, 857, 1187, 1397, 1958, 2023, 2090
FriOI GRGCYC 2 cut(s) 615, 1869
GlaI GCGC 5 cut(s) 21, 47, 151, 938, 981
GsuI CTGGAG 3 cut(s) 77, 1040, 1385
HaeII RGCGCY 1 cut(s) 940
HaeIII GGCC 6 cut(s) 100, 182, 199, 359, 693, 961
HapII CCGG 4 cut(s) 64, 179, 193, 214
HgaI GACGC 5 cut(s) 26, 102, 194, 980, 1072
HhaI GCGC 5 cut(s) 22, 48, 152, 939, 982
Hin1I GRCGYC 2 cut(s) 113, 972
Hin1II CATG 9 cut(s) 40, 346, 748, 780, 1171, 1352, 1884, 2071, 2129
Hin6I GCGC 5 cut(s) 20, 46, 150, 937, 980
HinP1I GCGC 5 cut(s) 20, 46, 150, 937, 980
HincII GTYRAC 1 cut(s) 991
HindII GTYRAC 1 cut(s) 991
HindIII AAGCTT 2 cut(s) 1272, 1763
HpaII CCGG 4 cut(s) 64, 179, 193, 214
HphI GGTGA 2 cut(s) 1487, 1820
Hpy166II GTNNAC 6 cut(s) 868, 970, 991, 1186, 1285, 1534
Hpy188III TCNNGA 7 cut(s) 94, 646, 848, 1343, 1417, 1622, 2153
Hpy8I GTNNAC 6 cut(s) 868, 970, 991, 1186, 1285, 1534
Hpy99I CGWCG 5 cut(s) 20, 188, 980, 992, 1066
HpyAV CCTTC 9 cut(s) 645, 649, 671, 758, 1348, 1352, 1414, 2029, 2129
HpyCH4IV ACGT 3 cut(s) 885, 987, 1002
HpyF10VI GCNNNNNNNGC 7 cut(s) 97, 119, 226, 401, 500, 1459, 1730
HpyF3I CTNAG 8 cut(s) 647, 1218, 1236, 1256, 1521, 1683, 1788, 1887
HpySE526I ACGT 3 cut(s) 885, 987, 1002
Hsp92I GRCGYC 2 cut(s) 113, 972
Hsp92II CATG 9 cut(s) 40, 346, 748, 780, 1171, 1352, 1884, 2071, 2129
HspAI GCGC 5 cut(s) 20, 46, 150, 937, 980
Ksp22I TGATCA 2 cut(s) 345, 1267
Kzo9I GATC 4 cut(s) 345, 894, 1267, 2149
LguI GCTCTTC 2 cut(s) 1257, 1874
LmnI GCTCC 6 cut(s) 96, 934, 1059, 1366, 1912, 1921
Lsp1109I GCAGC 6 cut(s) 216, 671, 1131, 1153, 1440, 2002
LweI GCATC 3 cut(s) 410, 847, 1936
MaeII ACGT 3 cut(s) 885, 987, 1002
MaeIII GTNAC 1 cut(s) 733
MalI GATC 4 cut(s) 347, 896, 1269, 2151
MboI GATC 4 cut(s) 345, 894, 1267, 2149
MflI RGATCY 1 cut(s) 894
MhlI GDGCHC 2 cut(s) 615, 1869
MlsI TGGCCA 1 cut(s) 359
MluNI TGGCCA 1 cut(s) 359
MlyI GAGTC 1 cut(s) 1076
MmeI TCCRAC 1 cut(s) 696
Mox20I TGGCCA 1 cut(s) 359
Mph1103I ATGCAT 3 cut(s) 1726, 1882, 1951
MroXI GAANNNNTTC 1 cut(s) 1970
MscI TGGCCA 1 cut(s) 359
MseI TTAA 8 cut(s) 222, 273, 425, 771, 1296, 1761, 1932, 2024
MslI CAYNNNNRTG 3 cut(s) 365, 1541, 2072
Msp20I TGGCCA 1 cut(s) 359
MspA1I CMGCKG 2 cut(s) 662, 1144
MspI CCGG 4 cut(s) 64, 179, 193, 214
MspR9I CCNGG 7 cut(s) 29, 65, 299, 822, 923, 1757, 1943
Mva1269I GAATGC 2 cut(s) 496, 1830
MvaI CCWGG 6 cut(s) 29, 299, 822, 923, 1757, 1943
MvnI CGCG 7 cut(s) 20, 48, 152, 188, 876, 980, 1049
MwoI GCNNNNNNNGC 7 cut(s) 97, 119, 226, 401, 500, 1459, 1730
NciI CCSGG 1 cut(s) 65
NdeII GATC 4 cut(s) 345, 894, 1267, 2149
NlaIII CATG 9 cut(s) 40, 346, 748, 780, 1171, 1352, 1884, 2071, 2129
NlaIV GGNNCC 4 cut(s) 1034, 1055, 1923, 2054
NmuCI GTSAC 1 cut(s) 733
NsiI ATGCAT 3 cut(s) 1726, 1882, 1951
NspI RCATGY 2 cut(s) 1884, 2129
OliI CACNNNNGTG 2 cut(s) 365, 1541
PaeR7I CTCGAG 1 cut(s) 1343
PceI AGGCCT 1 cut(s) 100
PciSI GCTCTTC 2 cut(s) 1257, 1874
PcsI WCGNNNNNNNCGW 3 cut(s) 959, 984, 993
PctI GAATGC 2 cut(s) 496, 1830
PdmI GAANNNNTTC 1 cut(s) 1970
PflFI GACNNNGTC 1 cut(s) 974
PfoI TCCNGGA 1 cut(s) 63
PleI GAGTC 1 cut(s) 1076
PmaCI CACGTG 1 cut(s) 1003
PmlI CACGTG 1 cut(s) 1003
PpsI GAGTC 1 cut(s) 1076
Ppu21I YACGTR 1 cut(s) 1003
PpuMI RGGWCCY 1 cut(s) 2016
Psp124BI GAGCTC 1 cut(s) 1869
Psp5II RGGWCCY 1 cut(s) 2016
Psp6I CCWGG 6 cut(s) 27, 297, 820, 921, 1755, 1941
PspCI CACGTG 1 cut(s) 1003
PspGI CCWGG 6 cut(s) 27, 297, 820, 921, 1755, 1941
PspN4I GGNNCC 4 cut(s) 1034, 1055, 1923, 2054
PspPI GGNCC 2 cut(s) 295, 2016
PspPPI RGGWCCY 1 cut(s) 2016
PstNI CAGNNNCTG 1 cut(s) 1159
PsuI RGATCY 1 cut(s) 894
PsyI GACNNNGTC 1 cut(s) 974
PvuII CAGCTG 2 cut(s) 662, 1144
RsaI GTAC 8 cut(s) 53, 538, 626, 908, 1187, 1286, 1646, 2066
RsaNI GTAC 8 cut(s) 52, 537, 625, 907, 1186, 1285, 1645, 2065
RseI CAYNNNNRTG 3 cut(s) 365, 1541, 2072
SacI GAGCTC 1 cut(s) 1869
SalI GTCGAC 1 cut(s) 989
SapI GCTCTTC 2 cut(s) 1257, 1874
SaqAI TTAA 8 cut(s) 222, 273, 425, 771, 1296, 1761, 1932, 2024
Sau3AI GATC 4 cut(s) 345, 894, 1267, 2149
Sau96I GGNCC 2 cut(s) 295, 2016
SchI GAGTC 1 cut(s) 1076
ScrFI CCNGG 7 cut(s) 29, 65, 299, 822, 923, 1757, 1943
SduI GDGCHC 2 cut(s) 615, 1869
SfaNI GCATC 3 cut(s) 410, 847, 1936
SfcI CTRYAG 1 cut(s) 1099
Sfr274I CTCGAG 1 cut(s) 1343
SinI GGWCC 2 cut(s) 295, 2016
SlaI CTCGAG 1 cut(s) 1343
SmiMI CAYNNNNRTG 3 cut(s) 365, 1541, 2072
SmlI CTYRAG 1 cut(s) 1343
SmoI CTYRAG 1 cut(s) 1343
SseBI AGGCCT 1 cut(s) 100
SsiI CCGC 9 cut(s) 196, 207, 249, 380, 754, 874, 1036, 1404, 1600
SstI GAGCTC 1 cut(s) 1869
StuI AGGCCT 1 cut(s) 100
StyD4I CCNGG 7 cut(s) 27, 63, 297, 820, 921, 1755, 1941
TaiI ACGT 3 cut(s) 888, 990, 1005
TaqI TCGA 3 cut(s) 990, 1080, 1344
TatI WGTACW 2 cut(s) 1644, 2064
TauI GCSGC 4 cut(s) 199, 210, 252, 1407
Tru1I TTAA 8 cut(s) 222, 273, 425, 771, 1296, 1761, 1932, 2024
Tru9I TTAA 8 cut(s) 222, 273, 425, 771, 1296, 1761, 1932, 2024
TscAI CASTG 5 cut(s) 394, 1160, 1381, 1546, 1785
TseFI GTSAC 1 cut(s) 733
TseI GCWGC 6 cut(s) 229, 659, 1141, 1144, 1453, 1990
Tsp45I GTSAC 1 cut(s) 733
TspGWI ACGGA 5 cut(s) 106, 308, 642, 955, 1397
TspRI CASTG 5 cut(s) 394, 1160, 1381, 1546, 1785
Tth111I GACNNNGTC 1 cut(s) 974
VpaK11BI GGWCC 2 cut(s) 295, 2016
XagI CCTNNNNNAGG 3 cut(s) 65, 944, 1109
XapI RAATTY 3 cut(s) 683, 1625, 1783
XceI RCATGY 2 cut(s) 1884, 2129
XhoI CTCGAG 1 cut(s) 1343
XmiI GTMKAC 2 cut(s) 867, 990
XmnI GAANNNNTTC 1 cut(s) 1970
Zsp2I ATGCAT 3 cut(s) 1726, 1882, 1951
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.