Rmu_sc0002583.1_g000001

ATPase 10, plasma

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002583.1
OG0014890
Physical Location & Seq
Reverse (-)
870 .. 10369
9500 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 3249 bp
atgtggatcattaggatcacccgattttcacccaaccatcagtcaactaccgaatcgattagatgtgttggggaggaggaggaggaagaaggaaggagcttcgtccctcttcccgcgcttccgaaatacttggatactaatttcaatagagatggcatcgatttggaacgcttacccctggaagaagtttttgaacaactgagaacatcagcgagaggactttcatccgatgatgctgaagccagattgcacatttttggctacaacaaacttgaagagaagacagagaacaaaattttgaagtttcttagctttatgtggaaccccttgtcatgggttatggaagctgcagcagttatggcacttgtccttgctaatggaggaggtgagggtcctgactggcaagactttgttgggattattgtcctattaataatcaattcaacaattagtttcatagaggagaataatgcgggaaatgctgcatcagctcttatggaacgtttatctccaaagacaagggttctcagagatgggcagtggcaagagcaagatgcaggtattttagtgccaggagacataattagcataaagctcggggatataattccagctgatgctcgtctacttgaaggagaccctctgaaagttgatcagtcggctcttacaggagagtctctggctgtcaccaagaggacaggtgatgaagtattttctggttcaacatgtaagcatggagaaattgaagctgtagtgatagcaaccggagttcactcattttttggaaaagcagcacatttagtcgacaccactgaagttgtgggacatttccagcaggtccttactgccattgggaatttctgcatttgctctatagctgtgggaatggttcttgaaatcattgtcatgttccccatacagcaacgttcttacagggatggaatcaacaaccttcttgttctcttaattggaggaattccaattgctatgccaacagtgttatctgtgacacttgcaattggttctcatcgactatctcaacagggtgcaattacaaaaaggatgacagcaattgaagaaatggcgggaatggatgtcctttgtagtgacaaaactggaactcttaccctgaaccgcctcactgttgataaaaacctggttgaggtttttaacaataatatagacagagacacagttatcttatttgcagccagagcagcaagactggagaatcaagacgcaattgatgcagccattaccaatatgcttggtgatccaagggaggcacgtgcaaatattaccgaagtgcattttctgcccttcaatccagtggacaagcgtactgccattacatacatcgactctgatggtaattggtatagggccagcaaaggagctccagaacagattctagatctttgccctgagaaaaatgagattgctggaagagtacatagcaccattgacaaatttgctgaaagaggcttgcggtctcttggagttgcttatcaggaagttccagaaaaaactaaagaaagccctggtggtccttggaccttttgtgggttgttgcccttgtttgatcctccgaggcatgacagtgctgaaaccattcgtagagcacttaaccttggagtcgctgtgaagatgattacaggtgaccagttggcaattgcgaaggagacagggagacggcttggtatgggaacaaacatgtatccttcctcttcattattgggccgcaaaaaagaagaagaccacgaagccgtgccagtggacgagctgattgagaaggcagatggctttgctggtgtcttccctgaacacaagtatgaaattgtaaaaatcttacaagaaaagaagcatgtcgttggaatgactggagatggtgttaacgatgcacctgctttaaagaaagcagacattggtatagcagtggcagattccacagatgctgcgagaagtgcttctgatatagtcttaacggaacctggcttaagtgtcattgtcagtgctgtcctgaccagtcgagctatattccagagaatgaagaattatactatatatgctgtttccattaccattaggattgtgcttggtttcgtgcttcttgcattgatatgggagtatgatttcccacctttcatggttctgattatagcaatactgaatgatgggaccatcatgacaatttcccaagatcgggtaaagccctctccaaagcctgacagttggaagttgaatgagatatttgcaactggcattgtcattggtacatatctagctttggttactgtgttattttactggactgtcattgagaccaccttctttgaggacaccttcggcttaatgtctatatccgacaacagtgaggaagtttcatctgctgtatatctgcaagttagcatcataagtcaagctctcatatttgttacccgaagtcaaggatggtcatttcttgagagacctggagctctgttgatgattgcattcgttgtggctcaactggtggctactctgattgccgtctatgcggaaatcagctttgcttacattagcggcattggatggggatgggctggagtcatatggttgtatagtttgattttctacttccccttggacattatcaagttcgcaattcgctatgccttgagtggagatgcctggaatttattgtttgatagaaagacagcttttactgctaagaaagattatgggaaggaagacagggcagctaaatgggtactttctcagagaactttacaggggttgcatgacatggagttcaaggcaggtagaactagccccaaaaattctggttggattgccgaacaggccagacggcgcgctgaaatagccaggttgggagagctacacactatgagaggacatgtagaatctgtaatgaggctcaaaaatttggacccgaaccccgcgcatcagccccctgcacctgcgtccatccctgcatcgcaggcccactgccgcacatccccattccggcctcagcctcaacctcacctcacctcaccggtcagcctcctccccagcgcccagcgatctgcagcagcaccagcacgtcgaactgcagcagcagcccaggcctctgacctgcagctcctccgaccagcgaccagctctgcccagtccgcttgcttcgcctgttccagtccgcctgatccgcctgcccagcccgcctgcccatccgcctgcctagtcttgcagattaggaggaagaactga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000325 GO:0003006 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005911 GO:0006725 GO:0006810 GO:0006811 GO:0006812 GO:0006873 GO:0006885 GO:0006996 GO:0007033 GO:0007035 GO:0007275 GO:0008150 GO:0008152 GO:0008324 GO:0008553 GO:0009058 GO:0009506 GO:0009507 GO:0009536 GO:0009698 GO:0009699 GO:0009705 GO:0009791 GO:0009987 GO:0010023 GO:0010154 GO:0010214 GO:0015075 GO:0015077 GO:0015078 GO:0015318 GO:0015399 GO:0015405 GO:0015662 GO:0015672 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0017144 GO:0018130 GO:0018958 GO:0019438 GO:0019725 GO:0019748 GO:0019829 GO:0022414 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030003 GO:0030004 GO:0030054 GO:0030641 GO:0031090 GO:0032501 GO:0032502 GO:0034220 GO:0036442 GO:0042592 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044237 GO:0044249 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0044550 GO:0045851 GO:0046189 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0048878 GO:0050801 GO:0051179 GO:0051234 GO:0051452 GO:0051453 GO:0055044 GO:0055067 GO:0055080 GO:0055082 GO:0055085 GO:0061458 GO:0065007 GO:0065008 GO:0071704 GO:0071840 GO:0090662 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098771 GO:0098805 GO:0099131 GO:0099132 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617 GO:1902600
KEGG Pathways
Metabolic & Signaling
ko00190 map00190
Pfam Domains
Protein Families
Cation_ATPase_N E1-E2_ATPase Hydrolase

Protein Analysis

1082

Amino Acids

118.68

Weight (kDa)

5.71

Isoelectric Point (pI)

46.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cation_ATPase_N PF00690 57 - 120 1.5e-14 Cation transporter/ATPase, N-terminus
E1-E2_ATPase PF00122 169 - 268 3.1e-30 P-type ATPase actuator domain
Hydrolase PF00702 364 - 641 3.3e-13 haloacid dehalogenase-like hydrolase
Cation_ATPase PF13246 415 - 532 5.4e-07 P-type ATPase, cytoplasmic domain N
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014890)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G17260
fragaria_vesca FvH4_6g36241
malus_domestica MD09G1171300.v1.1 MD17G1155800.v1.1
prunus_persica Prupe.3G029800_v2.0.a1 Prupe.3G029800_v2.0.a1
pyrus_communis pycom09g08870 pycom17g14850
rosa_chinensis RchiOBHm_Chr2g0148211
rosa_laevigata RLG00000020327
rosa_multiflora Rmu_sc0002583.1_g000001
rosa_roxburghii Rroxscaffold_2G00098990
rosa_rugosa Rorug02G0404500
rosa_samantha Rh2BG476300 Rh2CG449900
rosa_wichuraiana Rw2G037760

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 1912, 2968
Acc36I ACCTGC 6 cut(s) 548, 826, 1912, 2789, 2968, 3126
AccI GTMKAC 2 cut(s) 625, 804
AccII CGCG 3 cut(s) 116, 2853, 2942
AclI AACGTT 2 cut(s) 502, 925
AclWI GGATC 5 cut(s) 14, 23, 1268, 1577, 3179
AcsI RAATTY 7 cut(s) 294, 856, 975, 1469, 2674, 2818, 2923
AcuI CTGAAG 2 cut(s) 258, 834
AcvI CACGTG 1 cut(s) 1289
AfaI GTAC 4 cut(s) 1342, 1452, 2275, 2751
AfiI CCNNNNNNNGG 6 cut(s) 333, 1162, 1563, 2202, 2203, 3006
AflII CTTAAG 1 cut(s) 1996
AflIII ACRYGT 3 cut(s) 725, 1713, 2896
AgeI ACCGGT 1 cut(s) 3037
AjiI CACGTC 1 cut(s) 3086
AjnI CCWGG 9 cut(s) 177, 571, 1155, 1540, 1990, 2470, 2669, 2864, 3105
Alw21I GWGCWC 3 cut(s) 1399, 1624, 2479
Alw26I GTCTC 9 cut(s) 570, 630, 681, 1182, 1497, 1676, 1684, 2315, 2461
AlwI GGATC 5 cut(s) 14, 23, 1268, 1577, 3179
AlwNI CAGNNNCTG 1 cut(s) 1955
Ama87I CYCGRG 1 cut(s) 596
AoxI GGCC 6 cut(s) 1383, 1738, 2841, 2982, 3008, 3108
ApoI RAATTY 7 cut(s) 294, 856, 975, 1469, 2674, 2818, 2923
AseI ATTAAT 1 cut(s) 431
AsiGI ACCGGT 1 cut(s) 3037
Asp700I GAANNNNTTC 3 cut(s) 1407, 1611, 1966
AspLEI GCGC 5 cut(s) 118, 2853, 2855, 2944, 3059
AspS9I GGNCC 9 cut(s) 392, 838, 1383, 1547, 1554, 1738, 2178, 2929, 2983
AvaI CYCGRG 1 cut(s) 596
AvaII GGWCC 6 cut(s) 392, 838, 1547, 1554, 2178, 2929
BanII GRGCYC 2 cut(s) 1399, 2479
BbrPI CACGTG 1 cut(s) 1289
BbsI GAAGAC 4 cut(s) 287, 1761, 1807, 2736
Bbv12I GWGCWC 3 cut(s) 1399, 1624, 2479
BbvCI CCTCAGC 1 cut(s) 3012
BceAI ACGGC 4 cut(s) 1709, 1751, 2513, 2864
BcgI CGANNNNNNTGC 4 cut(s) 577, 611, 1886, 1920
BciT130I CCWGG 9 cut(s) 179, 573, 1157, 1542, 1992, 2472, 2671, 2866, 3107
BciVI GTATCC 2 cut(s) 127, 1728
BclI TGATCA 1 cut(s) 652
BcoDI GTCTC 9 cut(s) 570, 630, 681, 1182, 1497, 1676, 1684, 2315, 2461
BfaI CTAG 4 cut(s) 1412, 2282, 2808, 3221
BfmI CTRYAG 6 cut(s) 348, 750, 873, 3069, 3093, 3119
BfoI RGCGCY 1 cut(s) 3060
BfrI CTTAAG 1 cut(s) 1996
BfuAI ACCTGC 6 cut(s) 548, 826, 1912, 2789, 2968, 3126
BfuI GTATCC 2 cut(s) 127, 1728
BglI GCCNNNNNGGC 1 cut(s) 2840
BglII AGATCT 1 cut(s) 1414
Bme1390I CCNGG 9 cut(s) 179, 573, 1157, 1542, 1992, 2472, 2671, 2866, 3107
Bme18I GGWCC 6 cut(s) 392, 838, 1547, 1554, 2178, 2929
BmeT110I CYCGRG 1 cut(s) 596
BmgBI CACGTC 1 cut(s) 3086
BmgT120I GGNCC 9 cut(s) 392, 838, 1383, 1547, 1554, 1738, 2178, 2929, 2983
BmiI GGNNCC 5 cut(s) 323, 393, 1989, 2179, 2931
BmrFI CCNGG 9 cut(s) 179, 573, 1157, 1542, 1992, 2472, 2671, 2866, 3107
BmrI ACTGGG 1 cut(s) 3145
BmuI ACTGGG 1 cut(s) 3145
BpiI GAAGAC 4 cut(s) 287, 1761, 1807, 2736
BpmI CTGGAG 5 cut(s) 1247, 1383, 1902, 2493, 2604
Bpu10I CCTNAGC 1 cut(s) 3012
BpuEI CTTGAG 2 cut(s) 2483, 2677
Bsa29I ATCGAT 2 cut(s) 56, 159
BsaAI YACGTR 1 cut(s) 1289
BsaI GGTCTC 4 cut(s) 630, 1497, 2315, 2461
BsaJI CCNNGG 8 cut(s) 177, 1277, 1540, 1550, 1589, 1630, 2622, 3105
BsaWI WCCGGW 2 cut(s) 764, 3037
BsaXI ACNNNNNCTCC 4 cut(s) 1626, 1656, 1875, 1905
Bsc4I CCNNNNNNNGG 6 cut(s) 333, 1162, 1563, 2202, 2203, 3006
Bse118I RCCGGY 1 cut(s) 3037
BseBI CCWGG 9 cut(s) 179, 573, 1157, 1542, 1992, 2472, 2671, 2866, 3107
BseCI ATCGAT 2 cut(s) 56, 159
BseDI CCNNGG 8 cut(s) 177, 1277, 1540, 1550, 1589, 1630, 2622, 3105
BseLI CCNNNNNNNGG 6 cut(s) 333, 1162, 1563, 2202, 2203, 3006
BseMII CTCAG 5 cut(s) 191, 541, 1416, 2771, 3026
BsePI GCGCGC 1 cut(s) 2851
BseRI GAGGAG 7 cut(s) 89, 92, 95, 396, 476, 3038, 3116
BseYI CCCAGC 3 cut(s) 3053, 3060, 3195
BsgI GTGCAG 1 cut(s) 2940
Bsh1236I CGCG 3 cut(s) 116, 2853, 2942
BshFI GGCC 6 cut(s) 1385, 1740, 2843, 2984, 3010, 3110
BshTI ACCGGT 1 cut(s) 3037
BshVI ATCGAT 2 cut(s) 56, 159
BsiHKAI GWGCWC 3 cut(s) 1399, 1624, 2479
BsiHKCI CYCGRG 1 cut(s) 596
BsiSI CCGG 3 cut(s) 765, 3007, 3038
BslFI GGGAC 3 cut(s) 89, 837, 2191
BslI CCNNNNNNNGG 6 cut(s) 333, 1162, 1563, 2202, 2203, 3006
BsmAI GTCTC 9 cut(s) 570, 630, 681, 1182, 1497, 1676, 1684, 2315, 2461
BsmBI CGTCTC 1 cut(s) 1684
BsmFI GGGAC 3 cut(s) 89, 837, 2191
BsmI GAATGC 1 cut(s) 2492
BsnI GGCC 6 cut(s) 1385, 1740, 2843, 2984, 3010, 3110
Bso31I GGTCTC 4 cut(s) 630, 1497, 2315, 2461
BsoBI CYCGRG 1 cut(s) 596
Bsp1286I GDGCHC 3 cut(s) 1399, 1624, 2479
Bsp143I GATC 9 cut(s) 6, 15, 652, 1273, 1414, 1582, 2200, 3065, 3184
BspANI GGCC 6 cut(s) 1385, 1740, 2843, 2984, 3010, 3110
BspCNI CTCAG 5 cut(s) 192, 540, 1417, 2770, 3025
BspDI ATCGAT 2 cut(s) 56, 159
BspFNI CGCG 3 cut(s) 116, 2853, 2942
BspHI TCATGA 1 cut(s) 2184
BspLI GGNNCC 5 cut(s) 323, 393, 1989, 2179, 2931
BspMAI CTGCAG 4 cut(s) 352, 3073, 3097, 3123
BspMI ACCTGC 6 cut(s) 548, 826, 1912, 2789, 2968, 3126
BspPI GGATC 5 cut(s) 14, 23, 1268, 1577, 3179
BspTI CTTAAG 1 cut(s) 1996
BspTNI GGTCTC 4 cut(s) 630, 1497, 2315, 2461
BsrFI RCCGGY 1 cut(s) 3037
BssAI RCCGGY 1 cut(s) 3037
BssECI CCNNGG 8 cut(s) 177, 1277, 1540, 1550, 1589, 1630, 2622, 3105
BssHII GCGCGC 1 cut(s) 2851
BssMI GATC 9 cut(s) 6, 15, 652, 1273, 1414, 1582, 2200, 3065, 3184
BssT1I CCWWGG 4 cut(s) 1277, 1550, 1630, 2622
Bst2UI CCWGG 9 cut(s) 179, 573, 1157, 1542, 1992, 2472, 2671, 2866, 3107
Bst4CI ACNGT 8 cut(s) 997, 1144, 1195, 1601, 2231, 2296, 2314, 2372
Bst6I CTCTTC 4 cut(s) 114, 270, 1441, 1732
BstAFI CTTAAG 1 cut(s) 1996
BstAPI GCANNNNNTGC 2 cut(s) 1247, 1315
BstBAI YACGTR 1 cut(s) 1289
BstC8I GCNNGC 9 cut(s) 1387, 1487, 2853, 2982, 3160, 3192, 3201, 3205, 3217
BstDEI CTNAG 7 cut(s) 200, 308, 527, 1425, 2709, 2757, 3012
BstEII GGTNACC 1 cut(s) 1658
BstENI CCTNNNNNAGG 1 cut(s) 1160
BstFNI CGCG 3 cut(s) 116, 2853, 2942
BstH2I RGCGCY 1 cut(s) 3060
BstHHI GCGC 5 cut(s) 118, 2853, 2855, 2944, 3059
BstKTI GATC 9 cut(s) 9, 18, 655, 1276, 1417, 1585, 2203, 3068, 3187
BstMAI GTCTC 9 cut(s) 570, 630, 681, 1182, 1497, 1676, 1684, 2315, 2461
BstMBI GATC 9 cut(s) 6, 15, 652, 1273, 1414, 1582, 2200, 3065, 3184
BstNI CCWGG 9 cut(s) 179, 573, 1157, 1542, 1992, 2472, 2671, 2866, 3107
BstNSI RCATGY 4 cut(s) 729, 1717, 1868, 2900
BstPI GGTNACC 1 cut(s) 1658
BstSCI CCNGG 9 cut(s) 177, 571, 1155, 1540, 1990, 2470, 2669, 2864, 3105
BstSFI CTRYAG 6 cut(s) 348, 750, 873, 3069, 3093, 3119
BstUI CGCG 3 cut(s) 116, 2853, 2942
BstV2I GAAGAC 4 cut(s) 287, 1761, 1807, 2736
BstX2I RGATCY 1 cut(s) 1414
BstYI RGATCY 1 cut(s) 1414
Bsu15I ATCGAT 2 cut(s) 56, 159
BsuI GTATCC 2 cut(s) 127, 1728
BsuRI GGCC 6 cut(s) 1385, 1740, 2843, 2984, 3010, 3110
BsuTUI ATCGAT 2 cut(s) 56, 159
BtgZI GCGATG 1 cut(s) 2961
BtrI CACGTC 1 cut(s) 3086
BtsI GCAGTG 3 cut(s) 545, 1941, 2986
BveI ACCTGC 6 cut(s) 548, 826, 1912, 2789, 2968, 3126
Cac8I GCNNGC 9 cut(s) 1387, 1487, 2853, 2982, 3160, 3192, 3201, 3205, 3217
CaiI CAGNNNCTG 1 cut(s) 1955
CciI TCATGA 1 cut(s) 2184
CfoI GCGC 5 cut(s) 118, 2853, 2855, 2944, 3059
Cfr10I RCCGGY 1 cut(s) 3037
Cfr13I GGNCC 9 cut(s) 392, 838, 1383, 1547, 1554, 1738, 2178, 2929, 2983
ClaI ATCGAT 2 cut(s) 56, 159
CseI GACGC 2 cut(s) 1247, 2952
CsiI ACCWGGT 1 cut(s) 1155
Csp6I GTAC 4 cut(s) 1341, 1451, 2274, 2750
CspAI ACCGGT 1 cut(s) 3037
CspCI CAANNNNNGTGG 4 cut(s) 799, 834, 2314, 2349
CviQI GTAC 4 cut(s) 1341, 1451, 2274, 2750
DdeI CTNAG 7 cut(s) 200, 308, 527, 1425, 2709, 2757, 3012
DpnI GATC 9 cut(s) 8, 17, 654, 1275, 1416, 1584, 2202, 3067, 3186
DpnII GATC 9 cut(s) 6, 15, 652, 1273, 1414, 1582, 2200, 3065, 3184
DraI TTTAAA 1 cut(s) 1911
Eam1104I CTCTTC 4 cut(s) 114, 270, 1441, 1732
EarI CTCTTC 4 cut(s) 114, 270, 1441, 1732
EciI GGCGGA 3 cut(s) 3168, 3177, 3202
Ecl136II GAGCTC 2 cut(s) 1397, 2477
Eco130I CCWWGG 4 cut(s) 1277, 1550, 1630, 2622
Eco147I AGGCCT 1 cut(s) 3110
Eco24I GRGCYC 2 cut(s) 1399, 2479
Eco31I GGTCTC 4 cut(s) 630, 1497, 2315, 2461
Eco47I GGWCC 6 cut(s) 392, 838, 1547, 1554, 2178, 2929
Eco53kI GAGCTC 2 cut(s) 1397, 2477
Eco57I CTGAAG 2 cut(s) 258, 834
Eco72I CACGTG 1 cut(s) 1289
Eco88I CYCGRG 1 cut(s) 596
Eco91I GGTNACC 1 cut(s) 1658
EcoICRI GAGCTC 2 cut(s) 1397, 2477
EcoNI CCTNNNNNAGG 1 cut(s) 1160
EcoO109I RGGNCCY 2 cut(s) 392, 838
EcoO65I GGTNACC 1 cut(s) 1658
EcoRI GAATTC 1 cut(s) 975
EcoRII CCWGG 9 cut(s) 177, 571, 1155, 1540, 1990, 2470, 2669, 2864, 3105
EcoT14I CCWWGG 4 cut(s) 1277, 1550, 1630, 2622
EcoT38I GRGCYC 2 cut(s) 1399, 2479
ErhI CCWWGG 4 cut(s) 1277, 1550, 1630, 2622
Esp3I CGTCTC 1 cut(s) 1684
FaqI GGGAC 3 cut(s) 89, 837, 2191
FauI CCCGC 5 cut(s) 121, 466, 1078, 2947, 3208
FauNDI CATATG 1 cut(s) 2591
FbaI TGATCA 1 cut(s) 652
FblI GTMKAC 2 cut(s) 625, 804
FriOI GRGCYC 2 cut(s) 1399, 2479
FspBI CTAG 4 cut(s) 1412, 2282, 2808, 3221
GlaI GCGC 5 cut(s) 117, 2852, 2854, 2943, 3058
GsaI CCCAGC 3 cut(s) 3057, 3064, 3199
GsuI CTGGAG 5 cut(s) 1247, 1383, 1902, 2493, 2604
HaeII RGCGCY 1 cut(s) 3060
HaeIII GGCC 6 cut(s) 1385, 1740, 2843, 2984, 3010, 3110
HapII CCGG 3 cut(s) 765, 3007, 3038
HgaI GACGC 2 cut(s) 1247, 2952
HhaI GCGC 5 cut(s) 118, 2853, 2855, 2944, 3059
Hin6I GCGC 5 cut(s) 116, 2851, 2853, 2942, 3057
HinP1I GCGC 5 cut(s) 116, 2851, 2853, 2942, 3057
HincII GTYRAC 3 cut(s) 45, 805, 1894
HindII GTYRAC 3 cut(s) 45, 805, 1894
HpaI GTTAAC 1 cut(s) 1894
HpaII CCGG 3 cut(s) 765, 3007, 3038
Hpy166II GTNNAC 7 cut(s) 45, 626, 772, 805, 1333, 1777, 1894
Hpy8I GTNNAC 7 cut(s) 45, 626, 772, 805, 1333, 1777, 1894
Hpy99I CGWCG 1 cut(s) 3090
HpyCH4III ACNGT 8 cut(s) 997, 1144, 1195, 1601, 2231, 2296, 2314, 2372
HpyCH4IV ACGT 4 cut(s) 502, 925, 1288, 3085
HpyF3I CTNAG 7 cut(s) 200, 308, 527, 1425, 2709, 2757, 3012
HpySE526I ACGT 4 cut(s) 502, 925, 1288, 3085
HspAI GCGC 5 cut(s) 116, 2851, 2853, 2942, 3057
Ksp22I TGATCA 1 cut(s) 652
KspAI GTTAAC 1 cut(s) 1894
Kzo9I GATC 9 cut(s) 6, 15, 652, 1273, 1414, 1582, 2200, 3065, 3184
LmnI GCTCC 5 cut(s) 96, 1394, 1402, 2474, 3129
MabI ACCWGGT 1 cut(s) 1155
MaeI CTAG 4 cut(s) 1412, 2282, 2808, 3221
MaeII ACGT 4 cut(s) 502, 925, 1288, 3085
MaeIII GTNAC 6 cut(s) 685, 1006, 1106, 1658, 2290, 2434
MalI GATC 9 cut(s) 8, 17, 654, 1275, 1416, 1584, 2202, 3067, 3186
MboI GATC 9 cut(s) 6, 15, 652, 1273, 1414, 1582, 2200, 3065, 3184
MfeI CAATTG 5 cut(s) 981, 1017, 1071, 1242, 1671
MflI RGATCY 1 cut(s) 1414
MhlI GDGCHC 3 cut(s) 1399, 1624, 2479
MlyI GAGTC 4 cut(s) 683, 1355, 1644, 2595
MmeI TCCRAC 5 cut(s) 1852, 2213, 2388, 2807, 3154
MroXI GAANNNNTTC 3 cut(s) 1407, 1611, 1966
MseI TTAA 9 cut(s) 431, 965, 1170, 1626, 1893, 1910, 1982, 1997, 2351
MslI CAYNNNNRTG 4 cut(s) 905, 1599, 1830, 2119
MspA1I CMGCKG 1 cut(s) 614
MspCI CTTAAG 1 cut(s) 1996
MspI CCGG 3 cut(s) 765, 3007, 3038
MspR9I CCNGG 9 cut(s) 179, 573, 1157, 1542, 1992, 2472, 2671, 2866, 3107
MunI CAATTG 5 cut(s) 981, 1017, 1071, 1242, 1671
Mva1269I GAATGC 1 cut(s) 2492
MvaI CCWGG 9 cut(s) 179, 573, 1157, 1542, 1992, 2472, 2671, 2866, 3107
MvnI CGCG 3 cut(s) 116, 2853, 2942
NdeI CATATG 1 cut(s) 2591
NdeII GATC 9 cut(s) 6, 15, 652, 1273, 1414, 1582, 2200, 3065, 3184
NlaIV GGNNCC 5 cut(s) 323, 393, 1989, 2179, 2931
NmuCI GTSAC 4 cut(s) 685, 1006, 1106, 1658
NspI RCATGY 4 cut(s) 729, 1717, 1868, 2900
PagI TCATGA 1 cut(s) 2184
PaqCI CACCTGC 2 cut(s) 1912, 2968
PauI GCGCGC 1 cut(s) 2851
PceI AGGCCT 1 cut(s) 3110
PciI ACATGT 3 cut(s) 725, 1713, 2896
PctI GAATGC 1 cut(s) 2492
PdmI GAANNNNTTC 3 cut(s) 1407, 1611, 1966
PfeI GAWTC 6 cut(s) 53, 942, 1231, 1408, 1943, 2903
PinAI ACCGGT 1 cut(s) 3037
PleI GAGTC 4 cut(s) 682, 1355, 1643, 2594
PmaCI CACGTG 1 cut(s) 1289
PmlI CACGTG 1 cut(s) 1289
PpsI GAGTC 4 cut(s) 682, 1355, 1643, 2594
Ppu21I YACGTR 1 cut(s) 1289
PpuMI RGGWCCY 2 cut(s) 392, 838
PscI ACATGT 3 cut(s) 725, 1713, 2896
PshBI ATTAAT 1 cut(s) 431
Psp124BI GAGCTC 2 cut(s) 1399, 2479
Psp1406I AACGTT 2 cut(s) 502, 925
Psp5II RGGWCCY 2 cut(s) 392, 838
Psp6I CCWGG 9 cut(s) 177, 571, 1155, 1540, 1990, 2470, 2669, 2864, 3105
PspCI CACGTG 1 cut(s) 1289
PspEI GGTNACC 1 cut(s) 1658
PspFI CCCAGC 3 cut(s) 3053, 3060, 3195
PspGI CCWGG 9 cut(s) 177, 571, 1155, 1540, 1990, 2470, 2669, 2864, 3105
PspN4I GGNNCC 5 cut(s) 323, 393, 1989, 2179, 2931
PspPI GGNCC 9 cut(s) 392, 838, 1383, 1547, 1554, 1738, 2178, 2929, 2983
PspPPI RGGWCCY 2 cut(s) 392, 838
PstI CTGCAG 4 cut(s) 352, 3073, 3097, 3123
PstNI CAGNNNCTG 1 cut(s) 1955
PsuI RGATCY 1 cut(s) 1414
PteI GCGCGC 1 cut(s) 2851
PvuII CAGCTG 1 cut(s) 614
RsaI GTAC 4 cut(s) 1342, 1452, 2275, 2751
RsaNI GTAC 4 cut(s) 1341, 1451, 2274, 2750
RseI CAYNNNNRTG 4 cut(s) 905, 1599, 1830, 2119
SacI GAGCTC 2 cut(s) 1399, 2479
SalI GTCGAC 1 cut(s) 803
SaqAI TTAA 9 cut(s) 431, 965, 1170, 1626, 1893, 1910, 1982, 1997, 2351
Sau3AI GATC 9 cut(s) 6, 15, 652, 1273, 1414, 1582, 2200, 3065, 3184
Sau96I GGNCC 9 cut(s) 392, 838, 1383, 1547, 1554, 1738, 2178, 2929, 2983
SchI GAGTC 4 cut(s) 683, 1355, 1644, 2595
ScrFI CCNGG 9 cut(s) 179, 573, 1157, 1542, 1992, 2472, 2671, 2866, 3107
SduI GDGCHC 3 cut(s) 1399, 1624, 2479
SexAI ACCWGGT 1 cut(s) 1155
SfcI CTRYAG 6 cut(s) 348, 750, 873, 3069, 3093, 3119
SinI GGWCC 6 cut(s) 392, 838, 1547, 1554, 2178, 2929
SmiMI CAYNNNNRTG 4 cut(s) 905, 1599, 1830, 2119
SmlI CTYRAG 3 cut(s) 1996, 2462, 2656
SmoI CTYRAG 3 cut(s) 1996, 2462, 2656
SseBI AGGCCT 1 cut(s) 3110
SspI AATATT 1 cut(s) 1297
SspMI CTAG 4 cut(s) 1412, 2282, 2808, 3221
SstI GAGCTC 2 cut(s) 1399, 2479
StuI AGGCCT 1 cut(s) 3110
StyD4I CCNGG 9 cut(s) 177, 571, 1155, 1540, 1990, 2470, 2669, 2864, 3105
StyI CCWWGG 4 cut(s) 1277, 1550, 1630, 2622
TaaI ACNGT 8 cut(s) 997, 1144, 1195, 1601, 2231, 2296, 2314, 2372
TaiI ACGT 4 cut(s) 505, 928, 1291, 3088
TaqI TCGA 7 cut(s) 56, 159, 804, 1030, 1359, 2029, 3088
TatI WGTACW 1 cut(s) 1450
TauI GCSGC 3 cut(s) 1743, 2565, 2994
TfiI GAWTC 6 cut(s) 53, 942, 1231, 1408, 1943, 2903
Tru1I TTAA 9 cut(s) 431, 965, 1170, 1626, 1893, 1910, 1982, 1997, 2351
Tru9I TTAA 9 cut(s) 431, 965, 1170, 1626, 1893, 1910, 1982, 1997, 2351
TseFI GTSAC 4 cut(s) 685, 1006, 1106, 1658
Tsp45I GTSAC 4 cut(s) 685, 1006, 1106, 1658
TspDTI ATGAA 8 cut(s) 213, 445, 720, 1719, 1848, 2063, 2134, 2373
TspGWI ACGGA 1 cut(s) 2000
Vha464I CTTAAG 1 cut(s) 1996
VpaK11BI GGWCC 6 cut(s) 392, 838, 1547, 1554, 2178, 2929
VspI ATTAAT 1 cut(s) 431
XagI CCTNNNNNAGG 1 cut(s) 1160
XapI RAATTY 7 cut(s) 294, 856, 975, 1469, 2674, 2818, 2923
XbaI TCTAGA 1 cut(s) 1411
XceI RCATGY 4 cut(s) 729, 1717, 1868, 2900
XcmI CCANNNNNNNNNTGG 1 cut(s) 817
XmiI GTMKAC 2 cut(s) 625, 804
XmnI GAANNNNTTC 3 cut(s) 1407, 1611, 1966
XspI CTAG 4 cut(s) 1412, 2282, 2808, 3221
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.