DDB1- and CUL4-associated factor homolog
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G31160 |
| fragaria_vesca | FvH4_2g30560 |
| malus_domestica | MD08G1132100.v1.1 MD15G1113300.v1.1 |
| prunus_persica | Prupe.1G463700_v2.0.a1 |
| pyrus_communis | pycom08g11060 pycom15g10160 |
| rosa_chinensis | RchiOBHm_Chr6g0312521 |
| rosa_laevigata | RLG00000010322 |
| rosa_multiflora | Rmu_sc0003094.1_g000015 Rmu_sc0035272.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00156780 |
| rosa_rugosa | Rorug06G0396000 |
| rosa_samantha | Rh6AG513400 Rh6BG526600 Rh6CG531500 Rh6DG515500 |
| rosa_wichuraiana | Rw6G044640 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 5186 |
| AarI | CACCTGC | 4 cut(s) | 3384, 3955, 4243, 6370 |
| AatII | GACGTC | 2 cut(s) | 674, 6102 |
| Acc16I | TGCGCA | 1 cut(s) | 7278 |
| Acc36I | ACCTGC | 7 cut(s) | 3110, 3384, 3955, 4243, 6370, 6727, 6903 |
| Acc65I | GGTACC | 2 cut(s) | 2692, 4625 |
| AccB1I | GGYRCC | 4 cut(s) | 85, 2692, 4517, 4625 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 968, 4085 |
| AccBSI | CCGCTC | 2 cut(s) | 1541, 6067 |
| AccI | GTMKAC | 3 cut(s) | 1788, 3259, 4165 |
| AccII | CGCG | 7 cut(s) | 59, 5343, 6012, 6165, 6171, 6173, 6312 |
| AccIII | TCCGGA | 3 cut(s) | 674, 5208, 5298 |
| AclI | AACGTT | 1 cut(s) | 940 |
| AcoI | YGGCCR | 8 cut(s) | 165, 3603, 3906, 4595, 5934, 6166, 6249, 6759 |
| AcvI | CACGTG | 1 cut(s) | 7325 |
| AcyI | GRCGYC | 3 cut(s) | 86, 671, 6099 |
| AfeI | AGCGCT | 2 cut(s) | 2636, 6126 |
| AflII | CTTAAG | 1 cut(s) | 3919 |
| AflIII | ACRYGT | 1 cut(s) | 4456 |
| AgeI | ACCGGT | 1 cut(s) | 4980 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 645, 7023 |
| AjiI | CACGTC | 3 cut(s) | 1243, 3458, 5024 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 551, 583, 3818, 3850, 4305, 4337 |
| AleI | CACNNNNGTG | 1 cut(s) | 2346 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 6299, 6331 |
| Alw21I | GWGCWC | 5 cut(s) | 1885, 2041, 2099, 2377, 4698 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 428, 1400, 1942, 4387 |
| Ama87I | CYCGRG | 3 cut(s) | 2090, 2798, 5957 |
| Aor13HI | TCCGGA | 3 cut(s) | 674, 5208, 5298 |
| Aor51HI | AGCGCT | 2 cut(s) | 2636, 6126 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 6574, 6606 |
| AseI | ATTAAT | 1 cut(s) | 371 |
| AsiGI | ACCGGT | 1 cut(s) | 4980 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 3360, 3875, 6230, 7044 |
| Asp718I | GGTACC | 2 cut(s) | 2692, 4625 |
| AsuC2I | CCSGG | 4 cut(s) | 83, 1176, 4105, 4510 |
| AsuII | TTCGAA | 2 cut(s) | 2284, 6993 |
| AsuNHI | GCTAGC | 1 cut(s) | 3461 |
| AvaI | CYCGRG | 3 cut(s) | 2090, 2798, 5957 |
| AvaII | GGWCC | 8 cut(s) | 1763, 2521, 2534, 2794, 4108, 6034, 6145, 7090 |
| BaeGI | GKGCMC | 1 cut(s) | 1111 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 895, 928, 2676, 2709 |
| BalI | TGGCCA | 5 cut(s) | 167, 3605, 3908, 6251, 6761 |
| BamHI | GGATCC | 1 cut(s) | 4063 |
| BanI | GGYRCC | 4 cut(s) | 85, 2692, 4517, 4625 |
| BanII | GRGCYC | 3 cut(s) | 2377, 4698, 5886 |
| BauI | CACGAG | 1 cut(s) | 1017 |
| BbrPI | CACGTG | 1 cut(s) | 7325 |
| Bbv12I | GWGCWC | 5 cut(s) | 1885, 2041, 2099, 2377, 4698 |
| BbvCI | CCTCAGC | 2 cut(s) | 5868, 6813 |
| BceAI | ACGGC | 4 cut(s) | 344, 6070, 6173, 6261 |
| BcgI | CGANNNNNNTGC | 8 cut(s) | 1499, 1533, 3140, 3174, 4382, 4416, 5594, 5628 |
| BciVI | GTATCC | 3 cut(s) | 6514, 6996, 7295 |
| BclI | TGATCA | 2 cut(s) | 5128, 5472 |
| BcnI | CCSGG | 4 cut(s) | 83, 1176, 4105, 4510 |
| BfoI | RGCGCY | 4 cut(s) | 89, 2638, 6128, 6372 |
| BfrI | CTTAAG | 1 cut(s) | 3919 |
| BfuAI | ACCTGC | 7 cut(s) | 3110, 3384, 3955, 4243, 6370, 6727, 6903 |
| BfuI | GTATCC | 3 cut(s) | 6514, 6996, 7295 |
| BglII | AGATCT | 1 cut(s) | 2234 |
| BlpI | GCTNAGC | 1 cut(s) | 3384 |
| BmcAI | AGTACT | 3 cut(s) | 2366, 6543, 7007 |
| Bme18I | GGWCC | 8 cut(s) | 1763, 2521, 2534, 2794, 4108, 6034, 6145, 7090 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 645, 7023 |
| BmeT110I | CYCGRG | 3 cut(s) | 2090, 2798, 5957 |
| BmgBI | CACGTC | 3 cut(s) | 1243, 3458, 5024 |
| BmrI | ACTGGG | 6 cut(s) | 520, 651, 2213, 3026, 3631, 6727 |
| BmtI | GCTAGC | 1 cut(s) | 3465 |
| BmuI | ACTGGG | 6 cut(s) | 520, 651, 2213, 3026, 3631, 6727 |
| BoxI | GACNNNNGTC | 3 cut(s) | 1794, 6116, 6777 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 5900, 5932 |
| BpmI | CTGGAG | 4 cut(s) | 2259, 3167, 3317, 6513 |
| Bpu10I | CCTNAGC | 4 cut(s) | 2181, 2477, 5868, 6813 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 3384 |
| Bpu14I | TTCGAA | 2 cut(s) | 2284, 6993 |
| BpuEI | CTTGAG | 3 cut(s) | 1066, 1751, 5789 |
| BpuMI | CCSGG | 4 cut(s) | 83, 1176, 4105, 4510 |
| Bsa29I | ATCGAT | 1 cut(s) | 6083 |
| BsaAI | YACGTR | 4 cut(s) | 1028, 3263, 6295, 7325 |
| BsaBI | GATNNNNATC | 3 cut(s) | 5556, 6089, 6761 |
| BsaHI | GRCGYC | 3 cut(s) | 86, 671, 6099 |
| BsaI | GGTCTC | 3 cut(s) | 589, 4128, 6860 |
| BsaWI | WCCGGW | 7 cut(s) | 674, 1896, 2523, 4980, 5208, 5298, 5413 |
| Bse118I | RCCGGY | 3 cut(s) | 8, 4980, 6559 |
| Bse3DI | GCAATG | 4 cut(s) | 307, 1854, 3052, 5400 |
| Bse8I | GATNNNNATC | 3 cut(s) | 5556, 6089, 6761 |
| BseAI | TCCGGA | 3 cut(s) | 674, 5208, 5298 |
| BseCI | ATCGAT | 1 cut(s) | 6083 |
| BseJI | GATNNNNATC | 3 cut(s) | 5556, 6089, 6761 |
| BseMI | GCAATG | 4 cut(s) | 307, 1854, 3052, 5400 |
| BsePI | GCGCGC | 1 cut(s) | 6171 |
| BseSI | GKGCMC | 1 cut(s) | 1111 |
| BseX3I | CGGCCG | 1 cut(s) | 6166 |
| BseYI | CCCAGC | 4 cut(s) | 215, 2975, 3128, 5168 |
| BsgI | GTGCAG | 3 cut(s) | 1497, 2660, 6278 |
| Bsh1236I | CGCG | 7 cut(s) | 59, 5343, 6012, 6165, 6171, 6173, 6312 |
| Bsh1285I | CGRYCG | 3 cut(s) | 543, 2004, 6169 |
| BshNI | GGYRCC | 4 cut(s) | 85, 2692, 4517, 4625 |
| BshTI | ACCGGT | 1 cut(s) | 4980 |
| BshVI | ATCGAT | 1 cut(s) | 6083 |
| BsiEI | CGRYCG | 3 cut(s) | 543, 2004, 6169 |
| BsiHKAI | GWGCWC | 5 cut(s) | 1885, 2041, 2099, 2377, 4698 |
| BsiHKCI | CYCGRG | 3 cut(s) | 2090, 2798, 5957 |
| BsmBI | CGTCTC | 1 cut(s) | 7031 |
| BsmI | GAATGC | 4 cut(s) | 1288, 1597, 4867, 5769 |
| Bso31I | GGTCTC | 3 cut(s) | 589, 4128, 6860 |
| BsoBI | CYCGRG | 3 cut(s) | 2090, 2798, 5957 |
| Bsp119I | TTCGAA | 2 cut(s) | 2284, 6993 |
| Bsp1286I | GDGCHC | 7 cut(s) | 1111, 1885, 2041, 2099, 2377, 4698, 5886 |
| Bsp13I | TCCGGA | 3 cut(s) | 674, 5208, 5298 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 3384 |
| Bsp19I | CCATGG | 1 cut(s) | 4598 |
| BspDI | ATCGAT | 1 cut(s) | 6083 |
| BspEI | TCCGGA | 3 cut(s) | 674, 5208, 5298 |
| BspFNI | CGCG | 7 cut(s) | 59, 5343, 6012, 6165, 6171, 6173, 6312 |
| BspMAI | CTGCAG | 7 cut(s) | 1396, 1522, 2016, 2511, 2566, 3714, 6007 |
| BspMI | ACCTGC | 7 cut(s) | 3110, 3384, 3955, 4243, 6370, 6727, 6903 |
| BspOI | GCTAGC | 1 cut(s) | 3465 |
| BspQI | GCTCTTC | 1 cut(s) | 2046 |
| BspT104I | TTCGAA | 2 cut(s) | 2284, 6993 |
| BspT107I | GGYRCC | 4 cut(s) | 85, 2692, 4517, 4625 |
| BspTI | CTTAAG | 1 cut(s) | 3919 |
| BspTNI | GGTCTC | 3 cut(s) | 589, 4128, 6860 |
| BsrBI | CCGCTC | 2 cut(s) | 1541, 6067 |
| BsrDI | GCAATG | 4 cut(s) | 307, 1854, 3052, 5400 |
| BsrFI | RCCGGY | 3 cut(s) | 8, 4980, 6559 |
| BssAI | RCCGGY | 3 cut(s) | 8, 4980, 6559 |
| BssHII | GCGCGC | 1 cut(s) | 6171 |
| BssNI | GRCGYC | 3 cut(s) | 86, 671, 6099 |
| BssSI | CACGAG | 1 cut(s) | 1017 |
| BssT1I | CCWWGG | 5 cut(s) | 46, 168, 851, 3657, 4598 |
| Bst2BI | CACGAG | 1 cut(s) | 1017 |
| Bst6I | CTCTTC | 3 cut(s) | 2046, 2406, 4434 |
| BstACI | GRCGYC | 3 cut(s) | 86, 671, 6099 |
| BstAFI | CTTAAG | 1 cut(s) | 3919 |
| BstAPI | GCANNNNNTGC | 5 cut(s) | 428, 1418, 1942, 3125, 6619 |
| BstBAI | YACGTR | 4 cut(s) | 1028, 3263, 6295, 7325 |
| BstBI | TTCGAA | 2 cut(s) | 2284, 6993 |
| BstDSI | CCRYGG | 4 cut(s) | 1099, 4598, 5272, 6252 |
| BstEII | GGTNACC | 1 cut(s) | 2295 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 5708 |
| BstFNI | CGCG | 7 cut(s) | 59, 5343, 6012, 6165, 6171, 6173, 6312 |
| BstH2I | RGCGCY | 4 cut(s) | 89, 2638, 6128, 6372 |
| BstMCI | CGRYCG | 3 cut(s) | 543, 2004, 6169 |
| BstNSI | RCATGY | 3 cut(s) | 1936, 4460, 4641 |
| BstPAI | GACNNNNGTC | 3 cut(s) | 1794, 6116, 6777 |
| BstPI | GGTNACC | 1 cut(s) | 2295 |
| BstSLI | GKGCMC | 1 cut(s) | 1111 |
| BstUI | CGCG | 7 cut(s) | 59, 5343, 6012, 6165, 6171, 6173, 6312 |
| BstX2I | RGATCY | 5 cut(s) | 1178, 2234, 4063, 5203, 7078 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 5168 |
| BstYI | RGATCY | 5 cut(s) | 1178, 2234, 4063, 5203, 7078 |
| BstZI | CGGCCG | 1 cut(s) | 6166 |
| Bsu15I | ATCGAT | 1 cut(s) | 6083 |
| BsuI | GTATCC | 3 cut(s) | 6514, 6996, 7295 |
| BsuTUI | ATCGAT | 1 cut(s) | 6083 |
| BtgI | CCRYGG | 4 cut(s) | 1099, 4598, 5272, 6252 |
| BtgZI | GCGATG | 1 cut(s) | 4385 |
| BtrI | CACGTC | 3 cut(s) | 1243, 3458, 5024 |
| BtsI | GCAGTG | 5 cut(s) | 1015, 3010, 3620, 4659, 5839 |
| BveI | ACCTGC | 7 cut(s) | 3110, 3384, 3955, 4243, 6370, 6727, 6903 |
| CaiI | CAGNNNCTG | 4 cut(s) | 428, 1400, 1942, 4387 |
| CciNI | GCGGCCGC | 1 cut(s) | 6166 |
| Cfr10I | RCCGGY | 3 cut(s) | 8, 4980, 6559 |
| ClaI | ATCGAT | 1 cut(s) | 6083 |
| CseI | GACGC | 1 cut(s) | 2348 |
| CsiI | ACCWGGT | 2 cut(s) | 2052, 2061 |
| CspAI | ACCGGT | 1 cut(s) | 4980 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 3377, 3412 |
| DinI | GGCGCC | 1 cut(s) | 87 |
| DraI | TTTAAA | 2 cut(s) | 2214, 6697 |
| DriI | GACNNNNNGTC | 2 cut(s) | 645, 7023 |
| EaeI | YGGCCR | 8 cut(s) | 165, 3603, 3906, 4595, 5934, 6166, 6249, 6759 |
| EagI | CGGCCG | 1 cut(s) | 6166 |
| Eam1104I | CTCTTC | 3 cut(s) | 2046, 2406, 4434 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 645, 7023 |
| EarI | CTCTTC | 3 cut(s) | 2046, 2406, 4434 |
| EciI | GGCGGA | 4 cut(s) | 60, 4618, 5902, 6010 |
| Ecl136II | GAGCTC | 2 cut(s) | 2375, 4696 |
| EclXI | CGGCCG | 1 cut(s) | 6166 |
| Eco130I | CCWWGG | 5 cut(s) | 46, 168, 851, 3657, 4598 |
| Eco147I | AGGCCT | 1 cut(s) | 7189 |
| Eco24I | GRGCYC | 3 cut(s) | 2377, 4698, 5886 |
| Eco31I | GGTCTC | 3 cut(s) | 589, 4128, 6860 |
| Eco32I | GATATC | 4 cut(s) | 1360, 3102, 3976, 4118 |
| Eco47I | GGWCC | 8 cut(s) | 1763, 2521, 2534, 2794, 4108, 6034, 6145, 7090 |
| Eco47III | AGCGCT | 2 cut(s) | 2636, 6126 |
| Eco52I | CGGCCG | 1 cut(s) | 6166 |
| Eco53kI | GAGCTC | 2 cut(s) | 2375, 4696 |
| Eco72I | CACGTG | 1 cut(s) | 7325 |
| Eco88I | CYCGRG | 3 cut(s) | 2090, 2798, 5957 |
| Eco91I | GGTNACC | 1 cut(s) | 2295 |
| EcoICRI | GAGCTC | 2 cut(s) | 2375, 4696 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 5708 |
| EcoO109I | RGGNCCY | 4 cut(s) | 2620, 5636, 6034, 7090 |
| EcoO65I | GGTNACC | 1 cut(s) | 2295 |
| EcoRI | GAATTC | 4 cut(s) | 1234, 1490, 2719, 3448 |
| EcoRV | GATATC | 4 cut(s) | 1360, 3102, 3976, 4118 |
| EcoT14I | CCWWGG | 5 cut(s) | 46, 168, 851, 3657, 4598 |
| EcoT22I | ATGCAT | 3 cut(s) | 4643, 4843, 4869 |
| EcoT38I | GRGCYC | 3 cut(s) | 2377, 4698, 5886 |
| EgeI | GGCGCC | 1 cut(s) | 87 |
| EheI | GGCGCC | 1 cut(s) | 87 |
| ErhI | CCWWGG | 5 cut(s) | 46, 168, 851, 3657, 4598 |
| Esp3I | CGTCTC | 1 cut(s) | 7031 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 1465, 1497, 2443, 2475, 5221, 5253 |
| FauI | CCCGC | 1 cut(s) | 5094 |
| FauNDI | CATATG | 2 cut(s) | 1877, 4873 |
| FbaI | TGATCA | 2 cut(s) | 5128, 5472 |
| FblI | GTMKAC | 3 cut(s) | 1788, 3259, 4165 |
| FriOI | GRGCYC | 3 cut(s) | 2377, 4698, 5886 |
| FspI | TGCGCA | 1 cut(s) | 7278 |
| GsaI | CCCAGC | 4 cut(s) | 219, 2979, 3132, 5172 |
| GsuI | CTGGAG | 4 cut(s) | 2259, 3167, 3317, 6513 |
| HaeII | RGCGCY | 4 cut(s) | 89, 2638, 6128, 6372 |
| HgaI | GACGC | 1 cut(s) | 2348 |
| Hin1I | GRCGYC | 3 cut(s) | 86, 671, 6099 |
| HincII | GTYRAC | 4 cut(s) | 669, 1167, 5389, 6103 |
| HindII | GTYRAC | 4 cut(s) | 669, 1167, 5389, 6103 |
| HindIII | AAGCTT | 2 cut(s) | 1207, 3790 |
| HpaI | GTTAAC | 1 cut(s) | 5389 |
| Hpy99I | CGWCG | 8 cut(s) | 23, 128, 5343, 5609, 5612, 5973, 6101, 6194 |
| Hsp92I | GRCGYC | 3 cut(s) | 86, 671, 6099 |
| KasI | GGCGCC | 1 cut(s) | 85 |
| Kpn2I | TCCGGA | 3 cut(s) | 674, 5208, 5298 |
| KpnI | GGTACC | 2 cut(s) | 2696, 4629 |
| KroI | GCCGGC | 1 cut(s) | 8 |
| KroNI | GCCGGC | 1 cut(s) | 10 |
| Ksp22I | TGATCA | 2 cut(s) | 5128, 5472 |
| KspAI | GTTAAC | 1 cut(s) | 5389 |
| LguI | GCTCTTC | 1 cut(s) | 2046 |
| MabI | ACCWGGT | 2 cut(s) | 2052, 2061 |
| MbiI | CCGCTC | 2 cut(s) | 1541, 6067 |
| MfeI | CAATTG | 2 cut(s) | 1572, 3309 |
| MflI | RGATCY | 5 cut(s) | 1178, 2234, 4063, 5203, 7078 |
| MhlI | GDGCHC | 7 cut(s) | 1111, 1885, 2041, 2099, 2377, 4698, 5886 |
| MlsI | TGGCCA | 5 cut(s) | 167, 3605, 3908, 6251, 6761 |
| MluNI | TGGCCA | 5 cut(s) | 167, 3605, 3908, 6251, 6761 |
| Mly113I | GGCGCC | 1 cut(s) | 86 |
| MmeI | TCCRAC | 8 cut(s) | 1327, 2586, 3244, 3319, 4227, 4965, 6100, 6577 |
| Mox20I | TGGCCA | 5 cut(s) | 167, 3605, 3908, 6251, 6761 |
| Mph1103I | ATGCAT | 3 cut(s) | 4643, 4843, 4869 |
| MroI | TCCGGA | 3 cut(s) | 674, 5208, 5298 |
| MroNI | GCCGGC | 1 cut(s) | 8 |
| MroXI | GAANNNNTTC | 4 cut(s) | 3360, 3875, 6230, 7044 |
| MscI | TGGCCA | 5 cut(s) | 167, 3605, 3908, 6251, 6761 |
| MslI | CAYNNNNRTG | 6 cut(s) | 843, 1656, 2346, 4785, 4872, 6840 |
| Msp20I | TGGCCA | 5 cut(s) | 167, 3605, 3908, 6251, 6761 |
| MspA1I | CMGCKG | 4 cut(s) | 425, 1162, 2987, 3614 |
| MspCI | CTTAAG | 1 cut(s) | 3919 |
| MssI | GTTTAAAC | 1 cut(s) | 6697 |
| MunI | CAATTG | 2 cut(s) | 1572, 3309 |
| Mva1269I | GAATGC | 4 cut(s) | 1288, 1597, 4867, 5769 |
| MvnI | CGCG | 7 cut(s) | 59, 5343, 6012, 6165, 6171, 6173, 6312 |
| NaeI | GCCGGC | 1 cut(s) | 10 |
| NarI | GGCGCC | 1 cut(s) | 86 |
| NciI | CCSGG | 4 cut(s) | 83, 1176, 4105, 4510 |
| NcoI | CCATGG | 1 cut(s) | 4598 |
| NdeI | CATATG | 2 cut(s) | 1877, 4873 |
| NgoMIV | GCCGGC | 1 cut(s) | 8 |
| NheI | GCTAGC | 1 cut(s) | 3461 |
| NmeAIII | GCCGAG | 3 cut(s) | 3302, 5596, 6049 |
| NmuCI | GTSAC | 6 cut(s) | 2295, 3442, 4655, 6735, 6770, 7211 |
| NotI | GCGGCCGC | 1 cut(s) | 6166 |
| NsbI | TGCGCA | 1 cut(s) | 7278 |
| NsiI | ATGCAT | 3 cut(s) | 4643, 4843, 4869 |
| NspI | RCATGY | 3 cut(s) | 1936, 4460, 4641 |
| NspV | TTCGAA | 2 cut(s) | 2284, 6993 |
| OliI | CACNNNNGTG | 1 cut(s) | 2346 |
| PaeI | GCATGC | 1 cut(s) | 1936 |
| PaeR7I | CTCGAG | 2 cut(s) | 2090, 5957 |
| PaqCI | CACCTGC | 4 cut(s) | 3384, 3955, 4243, 6370 |
| PasI | CCCWGGG | 1 cut(s) | 34 |
| PauI | GCGCGC | 1 cut(s) | 6171 |
| PceI | AGGCCT | 1 cut(s) | 7189 |
| PciI | ACATGT | 1 cut(s) | 4456 |
| PciSI | GCTCTTC | 1 cut(s) | 2046 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 129, 1024 |
| PctI | GAATGC | 4 cut(s) | 1288, 1597, 4867, 5769 |
| PdiI | GCCGGC | 1 cut(s) | 10 |
| PdmI | GAANNNNTTC | 4 cut(s) | 3360, 3875, 6230, 7044 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 968, 4085 |
| PfoI | TCCNGGA | 2 cut(s) | 1332, 4066 |
| PinAI | ACCGGT | 1 cut(s) | 4980 |
| Ple19I | CGATCG | 1 cut(s) | 2004 |
| PluTI | GGCGCC | 1 cut(s) | 89 |
| PmaCI | CACGTG | 1 cut(s) | 7325 |
| PmeI | GTTTAAAC | 1 cut(s) | 6697 |
| PmlI | CACGTG | 1 cut(s) | 7325 |
| Ppu21I | YACGTR | 4 cut(s) | 1028, 3263, 6295, 7325 |
| PpuMI | RGGWCCY | 2 cut(s) | 6034, 7090 |
| PscI | ACATGT | 1 cut(s) | 4456 |
| PshAI | GACNNNNGTC | 3 cut(s) | 1794, 6116, 6777 |
| PshBI | ATTAAT | 1 cut(s) | 371 |
| PsiI | TTATAA | 1 cut(s) | 5186 |
| Psp124BI | GAGCTC | 2 cut(s) | 2377, 4698 |
| Psp1406I | AACGTT | 1 cut(s) | 940 |
| Psp5II | RGGWCCY | 2 cut(s) | 6034, 7090 |
| PspCI | CACGTG | 1 cut(s) | 7325 |
| PspEI | GGTNACC | 1 cut(s) | 2295 |
| PspFI | CCCAGC | 4 cut(s) | 215, 2975, 3128, 5168 |
| PspPPI | RGGWCCY | 2 cut(s) | 6034, 7090 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 4752, 4784 |
| PstI | CTGCAG | 7 cut(s) | 1396, 1522, 2016, 2511, 2566, 3714, 6007 |
| PstNI | CAGNNNCTG | 4 cut(s) | 428, 1400, 1942, 4387 |
| PsuI | RGATCY | 5 cut(s) | 1178, 2234, 4063, 5203, 7078 |
| PteI | GCGCGC | 1 cut(s) | 6171 |
| PvuI | CGATCG | 1 cut(s) | 2004 |
| PvuII | CAGCTG | 4 cut(s) | 425, 1162, 2987, 3614 |
| RseI | CAYNNNNRTG | 6 cut(s) | 843, 1656, 2346, 4785, 4872, 6840 |
| SacI | GAGCTC | 2 cut(s) | 2377, 4698 |
| SapI | GCTCTTC | 1 cut(s) | 2046 |
| ScaI | AGTACT | 3 cut(s) | 2366, 6543, 7007 |
| SduI | GDGCHC | 7 cut(s) | 1111, 1885, 2041, 2099, 2377, 4698, 5886 |
| SexAI | ACCWGGT | 2 cut(s) | 2052, 2061 |
| SfoI | GGCGCC | 1 cut(s) | 87 |
| Sfr274I | CTCGAG | 2 cut(s) | 2090, 5957 |
| SfuI | TTCGAA | 2 cut(s) | 2284, 6993 |
| SinI | GGWCC | 8 cut(s) | 1763, 2521, 2534, 2794, 4108, 6034, 6145, 7090 |
| SlaI | CTCGAG | 2 cut(s) | 2090, 5957 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 843, 1656, 2346, 4785, 4872, 6840 |
| SmlI | CTYRAG | 6 cut(s) | 1081, 1730, 2090, 3919, 5768, 5957 |
| SmoI | CTYRAG | 6 cut(s) | 1081, 1730, 2090, 3919, 5768, 5957 |
| SphI | GCATGC | 1 cut(s) | 1936 |
| SseBI | AGGCCT | 1 cut(s) | 7189 |
| SspDI | GGCGCC | 1 cut(s) | 85 |
| SspI | AATATT | 1 cut(s) | 4147 |
| SstI | GAGCTC | 2 cut(s) | 2377, 4698 |
| StuI | AGGCCT | 1 cut(s) | 7189 |
| StyI | CCWWGG | 5 cut(s) | 46, 168, 851, 3657, 4598 |
| TaqII | GACCGA | 3 cut(s) | 529, 2522, 4110 |
| TatI | WGTACW | 5 cut(s) | 1223, 2364, 6541, 7005, 7224 |
| TseFI | GTSAC | 6 cut(s) | 2295, 3442, 4655, 6735, 6770, 7211 |
| Tsp45I | GTSAC | 6 cut(s) | 2295, 3442, 4655, 6735, 6770, 7211 |
| TspGWI | ACGGA | 9 cut(s) | 403, 701, 3864, 5153, 5957, 6128, 6146, 6991, 7164 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 968, 4085 |
| Vha464I | CTTAAG | 1 cut(s) | 3919 |
| VpaK11BI | GGWCC | 8 cut(s) | 1763, 2521, 2534, 2794, 4108, 6034, 6145, 7090 |
| VspI | ATTAAT | 1 cut(s) | 371 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 5708 |
| XbaI | TCTAGA | 1 cut(s) | 1115 |
| XceI | RCATGY | 3 cut(s) | 1936, 4460, 4641 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 6593 |
| XhoI | CTCGAG | 2 cut(s) | 2090, 5957 |
| XmiI | GTMKAC | 3 cut(s) | 1788, 3259, 4165 |
| XmnI | GAANNNNTTC | 4 cut(s) | 3360, 3875, 6230, 7044 |
| ZraI | GACGTC | 2 cut(s) | 672, 6100 |
| ZrmI | AGTACT | 3 cut(s) | 2366, 6543, 7007 |
| Zsp2I | ATGCAT | 3 cut(s) | 4643, 4843, 4869 |