Rmu_sc0003221.1_g000066

Belongs to the enoyl-CoA hydratase isomerase family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003221.1
Physical Location & Seq
Forward (+)
312376 .. 323604
11229 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003221.1_g000066.1.cds

Sequence Viewer

Length: 1509 bp
atgtcatggagaaacctaatcgatgctggtgcggggtcttctgctggagatgacaggacatcgcggctcagatgcttcttcatcttggcggtgtttcgtccggtcgttaaagatggtaggcagatcggtggctggcaactcagtagcaggcaggttggtgggcgtagtgaccgcggcactaatttttctggcgagaggaaagaggctgggcttccatgcttatcacacacgggctcagtgcattgggccaggagagtccagtcactgcttcgtcagtgtggaacaaaaatcatgggtgctttcagagttctaagcaagtccctgagacattacacacccaaagcctctatatttccagagaattcaatcactcccaggcccaacaaatggctttaccaaactcgccggactctgattctagagtcagcaccctctcagtccgtcaacctccacaggctctccgactccgactccggaatcgttgaagttagtttggagagaccccaagtgagaaatgcaatagggaaagatatgctcaaaggtttgcagaacacgtttgaagctatcagtaaagattcatctgctaatgttttgttgatccgcagtaaagttcccaaggtgttctgtgcaggagcagatttgaaggaacgcaagatgatgagtgcaactgaggttcaagatttcgtgaacaagctgcgtgccacattctcatttctagaggtacttcccattcctaccatcgctgtcattgaaggggcagcattgggtggtggacttgaaatggctttatcatgcgatcttcggatatgtggagaagatgcagtattgggattgccagaaactggacttgctataattcccggggcaggtgggactcaacgacttcctagagtggttggaagatcaatagcaaaggaactcatattgactgggaggaagattggtggcagagaagcaatgtcaatgggtctggtaaactactgtgtccatgctggtgaagcttatctaaaggcacttgaagttgctcgcaatataaatgagaaggaaaccaaagataatgtttattttatgaaacaaaccgtgggcaatgcttgtggaactattggacttctgcatgctgttggaaacatcacttcagagatcaaacttgttgacgggtcattcttggatagattttttaaaagtactgcaagcatggatccattggagcgtgcagcattccttgaaaatgacaatgaaatggaagttgctcattcagtagcagctactgctggtgacacggaggctacagatgaggttgacactcactttatcagctatgcatgtgtggacggggaactatatgagcttgatgggaggaagtcaggtccgatctctcacggcccgtcttcaccaaccactatattacaggatgcagctaaagtcatacagggcatgatccagaaaaatcccgagtctctcaacttcaacgtcattgccatttcgaagaaatctgggggattttcttaa

Protein Analysis

502

Amino Acids

54.38

Weight (kDa)

8.85

Isoelectric Point (pI)

39.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0013516)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 857
Acc36I ACCTGC 2 cut(s) 142, 857
AccB7I CCANNNNNTGG 2 cut(s) 387, 842
AccII CGCG 2 cut(s) 64, 174
AccIII TCCGGA 1 cut(s) 473
AciI CCGC 6 cut(s) 32, 64, 89, 172, 174, 601
AclWI GGATC 4 cut(s) 592, 1193, 1206, 1432
AcsI RAATTY 1 cut(s) 361
AcuI CTGAAG 1 cut(s) 1119
AfaI GTAC 2 cut(s) 723, 1186
AfiI CCNNNNNNNGG 3 cut(s) 387, 842, 866
AflIII ACRYGT 1 cut(s) 552
AjnI CCWGG 2 cut(s) 248, 374
AluBI AGCT 7 cut(s) 563, 694, 1001, 1265, 1317, 1348, 1418
AluI AGCT 7 cut(s) 563, 694, 1001, 1265, 1317, 1348, 1418
Alw26I GTCTC 3 cut(s) 319, 493, 1461
AlwI GGATC 4 cut(s) 592, 1193, 1206, 1432
AlwNI CAGNNNCTG 3 cut(s) 265, 842, 1268
Ama87I CYCGRG 2 cut(s) 860, 1451
Aor13HI TCCGGA 1 cut(s) 473
AoxI GGCC 3 cut(s) 246, 377, 1381
ApeKI GCWGC 5 cut(s) 694, 758, 1214, 1262, 1415
ApoI RAATTY 1 cut(s) 361
AspS9I GGNCC 4 cut(s) 246, 378, 1367, 1382
AsuC2I CCSGG 2 cut(s) 861, 862
AsuHPI GGTGA 3 cut(s) 1007, 1286, 1383
AsuII TTCGAA 1 cut(s) 1484
AvaI CYCGRG 2 cut(s) 860, 1451
AvaII GGWCC 1 cut(s) 1367
BamHI GGATCC 1 cut(s) 1198
BanII GRGCYC 1 cut(s) 236
BbsI GAAGAC 2 cut(s) 30, 1380
BbvI GCAGC 5 cut(s) 681, 770, 1226, 1274, 1427
BccI CCATC 3 cut(s) 107, 746, 1346
BceAI ACGGC 1 cut(s) 1396
BcgI CGANNNNNNTGC 2 cut(s) 11, 45
BciT130I CCWGG 2 cut(s) 250, 376
BcnI CCSGG 2 cut(s) 861, 862
BcoDI GTCTC 3 cut(s) 319, 493, 1461
BfaI CTAG 3 cut(s) 419, 716, 888
BfmI CTRYAG 1 cut(s) 1287
BfuAI ACCTGC 2 cut(s) 142, 857
BisI GCNGC 7 cut(s) 65, 175, 695, 759, 1215, 1263, 1416
BlsI GCNGC 7 cut(s) 66, 176, 696, 760, 1216, 1264, 1417
BmcAI AGTACT 1 cut(s) 1186
Bme1390I CCNGG 4 cut(s) 250, 376, 861, 862
Bme18I GGWCC 1 cut(s) 1367
BmeT110I CYCGRG 2 cut(s) 860, 1451
BmgT120I GGNCC 4 cut(s) 246, 378, 1367, 1382
BmiI GGNNCC 1 cut(s) 1200
BmrFI CCNGG 4 cut(s) 250, 376, 861, 862
BmrI ACTGGG 1 cut(s) 939
BmsI GCATC 4 cut(s) 13, 62, 808, 1402
BmuI ACTGGG 1 cut(s) 939
BpiI GAAGAC 2 cut(s) 30, 1380
BpmI CTGGAG 1 cut(s) 66
Bpu14I TTCGAA 1 cut(s) 1484
BpuMI CCSGG 2 cut(s) 861, 862
Bsa29I ATCGAT 1 cut(s) 21
BsaI GGTCTC 1 cut(s) 493
BsaJI CCNNGG 6 cut(s) 172, 374, 615, 860, 861, 1080
BsaWI WCCGGW 2 cut(s) 100, 473
BsaXI ACNNNNNCTCC 4 cut(s) 443, 455, 473, 485
Bsc4I CCNNNNNNNGG 3 cut(s) 387, 842, 866
Bse1I ACTGG 3 cut(s) 259, 847, 934
Bse3DI GCAATG 3 cut(s) 963, 1093, 1473
BseAI TCCGGA 1 cut(s) 473
BseBI CCWGG 2 cut(s) 250, 376
BseCI ATCGAT 1 cut(s) 21
BseDI CCNNGG 6 cut(s) 172, 374, 615, 860, 861, 1080
BseGI GGATG 1 cut(s) 1417
BseLI CCNNNNNNNGG 3 cut(s) 387, 842, 866
BseMI GCAATG 3 cut(s) 963, 1093, 1473
BseMII CTCAG 6 cut(s) 82, 154, 249, 314, 449, 660
BseNI ACTGG 3 cut(s) 259, 847, 934
BseXI GCAGC 5 cut(s) 681, 770, 1226, 1274, 1427
BseYI CCCAGC 1 cut(s) 206
BsgI GTGCAG 2 cut(s) 648, 1233
Bsh1236I CGCG 2 cut(s) 64, 174
Bsh1285I CGRYCG 1 cut(s) 105
BshFI GGCC 3 cut(s) 248, 379, 1383
BshVI ATCGAT 1 cut(s) 21
BsiEI CGRYCG 1 cut(s) 105
BsiHKCI CYCGRG 2 cut(s) 860, 1451
BsiSI CCGG 4 cut(s) 101, 406, 474, 861
BslFI GGGAC 2 cut(s) 304, 886
BslI CCNNNNNNNGG 3 cut(s) 387, 842, 866
BsmAI GTCTC 3 cut(s) 319, 493, 1461
BsmFI GGGAC 2 cut(s) 304, 886
BsmI GAATGC 1 cut(s) 1217
BsnI GGCC 3 cut(s) 248, 379, 1383
Bso31I GGTCTC 1 cut(s) 493
BsoBI CYCGRG 2 cut(s) 860, 1451
Bsp119I TTCGAA 1 cut(s) 1484
Bsp1286I GDGCHC 1 cut(s) 236
Bsp13I TCCGGA 1 cut(s) 473
Bsp143I GATC 8 cut(s) 123, 597, 796, 902, 1140, 1198, 1371, 1437
BspACI CCGC 6 cut(s) 32, 64, 89, 172, 174, 601
BspANI GGCC 3 cut(s) 248, 379, 1383
BspCNI CTCAG 6 cut(s) 81, 153, 248, 315, 448, 661
BspDI ATCGAT 1 cut(s) 21
BspEI TCCGGA 1 cut(s) 473
BspFNI CGCG 2 cut(s) 64, 174
BspLI GGNNCC 1 cut(s) 1200
BspMI ACCTGC 2 cut(s) 142, 857
BspPI GGATC 4 cut(s) 592, 1193, 1206, 1432
BspT104I TTCGAA 1 cut(s) 1484
BspTNI GGTCTC 1 cut(s) 493
BsrDI GCAATG 3 cut(s) 963, 1093, 1473
BsrI ACTGG 3 cut(s) 259, 847, 934
BssECI CCNNGG 6 cut(s) 172, 374, 615, 860, 861, 1080
BssMI GATC 8 cut(s) 123, 597, 796, 902, 1140, 1198, 1371, 1437
BssT1I CCWWGG 1 cut(s) 615
Bst2UI CCWGG 2 cut(s) 250, 376
Bst4CI ACNGT 2 cut(s) 983, 1081
BstAPI GCANNNNNTGC 1 cut(s) 1268
BstBI TTCGAA 1 cut(s) 1484
BstC8I GCNNGC 7 cut(s) 134, 149, 699, 1027, 1116, 1192, 1212
BstDEI CTNAG 7 cut(s) 68, 140, 235, 311, 323, 435, 669
BstDSI CCRYGG 2 cut(s) 172, 1080
BstF5I GGATG 1 cut(s) 1417
BstFNI CGCG 2 cut(s) 64, 174
BstKTI GATC 8 cut(s) 126, 600, 799, 905, 1143, 1201, 1374, 1440
BstMAI GTCTC 3 cut(s) 319, 493, 1461
BstMBI GATC 8 cut(s) 123, 597, 796, 902, 1140, 1198, 1371, 1437
BstMCI CGRYCG 1 cut(s) 105
BstMWI GCNNNNNNNGC 2 cut(s) 998, 1268
BstNI CCWGG 2 cut(s) 250, 376
BstNSI RCATGY 2 cut(s) 1118, 1326
BstSCI CCNGG 4 cut(s) 248, 374, 859, 860
BstSFI CTRYAG 1 cut(s) 1287
BstUI CGCG 2 cut(s) 64, 174
BstV1I GCAGC 5 cut(s) 681, 770, 1226, 1274, 1427
BstV2I GAAGAC 2 cut(s) 30, 1380
BstX2I RGATCY 1 cut(s) 1198
BstYI RGATCY 1 cut(s) 1198
Bsu15I ATCGAT 1 cut(s) 21
BsuRI GGCC 3 cut(s) 248, 379, 1383
BsuTUI ATCGAT 1 cut(s) 21
BtgI CCRYGG 2 cut(s) 172, 1080
BtgZI GCGATG 2 cut(s) 45, 724
BtsCI GGATG 1 cut(s) 1417
BtsI GCAGTG 1 cut(s) 263
BtsIMutI CAGTG 3 cut(s) 243, 263, 281
BveI ACCTGC 2 cut(s) 142, 857
Cac8I GCNNGC 7 cut(s) 134, 149, 699, 1027, 1116, 1192, 1212
CaiI CAGNNNCTG 3 cut(s) 265, 842, 1268
Cfr13I GGNCC 4 cut(s) 246, 378, 1367, 1382
Cfr42I CCGCGG 1 cut(s) 175
Cfr9I CCCGGG 1 cut(s) 860
ClaI ATCGAT 1 cut(s) 21
Csp6I GTAC 2 cut(s) 722, 1185
CspCI CAANNNNNGTGG 2 cut(s) 1075, 1110
CviAII CATG 9 cut(s) 6, 216, 292, 792, 989, 1115, 1195, 1323, 1435
CviQI GTAC 2 cut(s) 722, 1185
DdeI CTNAG 7 cut(s) 68, 140, 235, 311, 323, 435, 669
DpnI GATC 8 cut(s) 125, 599, 798, 904, 1142, 1200, 1373, 1439
DpnII GATC 8 cut(s) 123, 597, 796, 902, 1140, 1198, 1371, 1437
DraI TTTAAA 1 cut(s) 1180
Eco130I CCWWGG 1 cut(s) 615
Eco24I GRGCYC 1 cut(s) 236
Eco31I GGTCTC 1 cut(s) 493
Eco47I GGWCC 1 cut(s) 1367
Eco57I CTGAAG 1 cut(s) 1119
Eco88I CYCGRG 2 cut(s) 860, 1451
EcoRI GAATTC 1 cut(s) 361
EcoRII CCWGG 2 cut(s) 248, 374
EcoT14I CCWWGG 1 cut(s) 615
EcoT22I ATGCAT 1 cut(s) 1324
EcoT38I GRGCYC 1 cut(s) 236
ErhI CCWWGG 1 cut(s) 615
FaeI CATG 9 cut(s) 9, 219, 295, 795, 992, 1118, 1198, 1326, 1438
FaqI GGGAC 2 cut(s) 304, 886
FatI CATG 9 cut(s) 5, 215, 291, 791, 988, 1114, 1194, 1322, 1434
FauI CCCGC 1 cut(s) 25
Fnu4HI GCNGC 7 cut(s) 65, 175, 695, 759, 1215, 1263, 1416
FokI GGATG 1 cut(s) 1424
FriOI GRGCYC 1 cut(s) 236
Fsp4HI GCNGC 7 cut(s) 65, 175, 695, 759, 1215, 1263, 1416
FspBI CTAG 3 cut(s) 419, 716, 888
GluI GCNGC 7 cut(s) 65, 175, 695, 759, 1215, 1263, 1416
GsaI CCCAGC 1 cut(s) 210
GsuI CTGGAG 1 cut(s) 66
HaeIII GGCC 3 cut(s) 248, 379, 1383
HapII CCGG 4 cut(s) 101, 406, 474, 861
Hin1II CATG 9 cut(s) 9, 219, 295, 795, 992, 1118, 1198, 1326, 1438
HincII GTYRAC 3 cut(s) 445, 1153, 1300
HindII GTYRAC 3 cut(s) 445, 1153, 1300
HindIII AAGCTT 1 cut(s) 999
HpaII CCGG 4 cut(s) 101, 406, 474, 861
HphI GGTGA 3 cut(s) 1007, 1286, 1383
Hpy166II GTNNAC 7 cut(s) 445, 688, 773, 976, 1153, 1300, 1330
Hpy188I TCNGA 8 cut(s) 71, 305, 414, 463, 469, 804, 1138, 1371
Hpy188III TCNNGA 8 cut(s) 356, 419, 474, 677, 685, 716, 1441, 1451
Hpy8I GTNNAC 7 cut(s) 445, 688, 773, 976, 1153, 1300, 1330
HpyAV CCTTC 3 cut(s) 637, 746, 1036
HpyCH4III ACNGT 2 cut(s) 983, 1081
HpyCH4IV ACGT 2 cut(s) 554, 1470
HpyF10VI GCNNNNNNNGC 2 cut(s) 998, 1268
HpyF3I CTNAG 7 cut(s) 68, 140, 235, 311, 323, 435, 669
HpySE526I ACGT 2 cut(s) 554, 1470
Hsp92II CATG 9 cut(s) 9, 219, 295, 795, 992, 1118, 1198, 1326, 1438
Kpn2I TCCGGA 1 cut(s) 473
KspI CCGCGG 1 cut(s) 175
Kzo9I GATC 8 cut(s) 123, 597, 796, 902, 1140, 1198, 1371, 1437
LmnI GCTCC 2 cut(s) 632, 1207
Lsp1109I GCAGC 5 cut(s) 681, 770, 1226, 1274, 1427
LweI GCATC 4 cut(s) 13, 62, 808, 1402
MaeI CTAG 3 cut(s) 419, 716, 888
MaeII ACGT 2 cut(s) 554, 1470
MaeIII GTNAC 3 cut(s) 167, 261, 1274
MalI GATC 8 cut(s) 125, 599, 798, 904, 1142, 1200, 1373, 1439
MboI GATC 8 cut(s) 123, 597, 796, 902, 1140, 1198, 1371, 1437
MboII GAAGA 8 cut(s) 30, 70, 791, 827, 912, 949, 1380, 1498
MflI RGATCY 1 cut(s) 1198
MhlI GDGCHC 1 cut(s) 236
MluCI AATT 3 cut(s) 181, 361, 855
MlyI GAGTC 7 cut(s) 264, 403, 431, 458, 464, 868, 1463
MmeI TCCRAC 4 cut(s) 486, 492, 877, 1102
Mph1103I ATGCAT 1 cut(s) 1324
MroI TCCGGA 1 cut(s) 473
MseI TTAA 3 cut(s) 108, 1179, 1507
MslI CAYNNNNRTG 1 cut(s) 993
MspA1I CMGCKG 1 cut(s) 174
MspI CCGG 4 cut(s) 101, 406, 474, 861
MspR9I CCNGG 4 cut(s) 250, 376, 861, 862
Mva1269I GAATGC 1 cut(s) 1217
MvaI CCWGG 2 cut(s) 250, 376
MvnI CGCG 2 cut(s) 64, 174
MwoI GCNNNNNNNGC 2 cut(s) 998, 1268
NciI CCSGG 2 cut(s) 861, 862
NdeII GATC 8 cut(s) 123, 597, 796, 902, 1140, 1198, 1371, 1437
NlaIII CATG 9 cut(s) 9, 219, 295, 795, 992, 1118, 1198, 1326, 1438
NlaIV GGNNCC 1 cut(s) 1200
NmuCI GTSAC 3 cut(s) 167, 261, 1274
NsiI ATGCAT 1 cut(s) 1324
NspI RCATGY 2 cut(s) 1118, 1326
NspV TTCGAA 1 cut(s) 1484
PaeI GCATGC 1 cut(s) 1118
PaqCI CACCTGC 1 cut(s) 857
PctI GAATGC 1 cut(s) 1217
PfeI GAWTC 3 cut(s) 415, 477, 575
PflMI CCANNNNNTGG 2 cut(s) 387, 842
PkrI GCNGC 7 cut(s) 66, 176, 696, 760, 1216, 1264, 1417
PleI GAGTC 7 cut(s) 263, 403, 430, 458, 464, 868, 1462
PpsI GAGTC 7 cut(s) 263, 403, 430, 458, 464, 868, 1462
Psp6I CCWGG 2 cut(s) 248, 374
PspFI CCCAGC 1 cut(s) 206
PspGI CCWGG 2 cut(s) 248, 374
PspN4I GGNNCC 1 cut(s) 1200
PspPI GGNCC 4 cut(s) 246, 378, 1367, 1382
PstNI CAGNNNCTG 3 cut(s) 265, 842, 1268
PsuI RGATCY 1 cut(s) 1198
RsaI GTAC 2 cut(s) 723, 1186
RsaNI GTAC 2 cut(s) 722, 1185
RseI CAYNNNNRTG 1 cut(s) 993
SacII CCGCGG 1 cut(s) 175
SaqAI TTAA 3 cut(s) 108, 1179, 1507
SatI GCNGC 7 cut(s) 65, 175, 695, 759, 1215, 1263, 1416
Sau3AI GATC 8 cut(s) 123, 597, 796, 902, 1140, 1198, 1371, 1437
Sau96I GGNCC 4 cut(s) 246, 378, 1367, 1382
ScaI AGTACT 1 cut(s) 1186
SchI GAGTC 7 cut(s) 264, 403, 431, 458, 464, 868, 1463
ScrFI CCNGG 4 cut(s) 250, 376, 861, 862
SduI GDGCHC 1 cut(s) 236
SfaNI GCATC 4 cut(s) 13, 62, 808, 1402
SfcI CTRYAG 1 cut(s) 1287
Sfr303I CCGCGG 1 cut(s) 175
SfuI TTCGAA 1 cut(s) 1484
SgrBI CCGCGG 1 cut(s) 175
SinI GGWCC 1 cut(s) 1367
SmaI CCCGGG 1 cut(s) 862
SmiMI CAYNNNNRTG 1 cut(s) 993
SphI GCATGC 1 cut(s) 1118
Sse9I AATT 3 cut(s) 181, 361, 855
SsiI CCGC 6 cut(s) 32, 64, 89, 172, 174, 601
SspMI CTAG 3 cut(s) 419, 716, 888
StyD4I CCNGG 4 cut(s) 248, 374, 859, 860
StyI CCWWGG 1 cut(s) 615
TaaI ACNGT 2 cut(s) 983, 1081
TaiI ACGT 2 cut(s) 557, 1473
TaqI TCGA 2 cut(s) 21, 1484
TasI AATT 3 cut(s) 181, 361, 855
TatI WGTACW 1 cut(s) 1184
TauI GCSGC 2 cut(s) 67, 177
TfiI GAWTC 3 cut(s) 415, 477, 575
Tru1I TTAA 3 cut(s) 108, 1179, 1507
Tru9I TTAA 3 cut(s) 108, 1179, 1507
TscAI CASTG 3 cut(s) 243, 270, 281
TseFI GTSAC 3 cut(s) 167, 261, 1274
TseI GCWGC 5 cut(s) 694, 758, 1214, 1262, 1415
Tsp45I GTSAC 3 cut(s) 167, 261, 1274
TspDTI ATGAA 4 cut(s) 70, 567, 1085, 1251
TspGWI ACGGA 2 cut(s) 430, 1295
TspMI CCCGGG 1 cut(s) 860
TspRI CASTG 3 cut(s) 243, 270, 281
Van91I CCANNNNNTGG 2 cut(s) 387, 842
VpaK11BI GGWCC 1 cut(s) 1367
XapI RAATTY 1 cut(s) 361
XbaI TCTAGA 2 cut(s) 418, 715
XceI RCATGY 2 cut(s) 1118, 1326
XmaI CCCGGG 1 cut(s) 860
XspI CTAG 3 cut(s) 419, 716, 888
ZrmI AGTACT 1 cut(s) 1186
Zsp2I ATGCAT 1 cut(s) 1324
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.