Rh7CG228700

Belongs to the enoyl-CoA hydratase isomerase family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
Physical Location & Seq
Reverse (-)
21319865 .. 21336033
16169 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG228700.1

Sequence Viewer

Length: 1314 bp
ATGGTCATAACTCACAACTCACTAGTAGAATTTACTGATCGCTGGAAGTTTCTCTATGAAGCAAGGAAGTGGTTAAAGCTAGTAGAGCATATATTGGCCATGATAGATTCAGTTATGGCCTTAATGATAGTTTGGGGGATTTTGATGAGCACAATTTATTTGGATATCTTGATTTTCAAAGATTCAGGACCTGATGACTCTTCCTTGGTGCCAAGCCAAGCAGTGAAACCTTTTGGTGTCGCCGGACGGGAGCCTAGTCGAGTCTGTGCACTGGAGGACATCGCGGCTCAGATGCTTCTTCGTCTTGGTGGTGTTTCGTCTAGTCGTTTAAGATGGCAGGCAGAGAGAGTCCAGTCACTGCTTCGTCAGTGTGGAACAAAAATCATGGGTGCTTTCAGAGTTCTAAGCAAGTCCCTCAGACATTACACACCCAAAGCCTCTATATTTCCAGAGAATTCAATCACTCCCAGGCCCAACAAATGGCTTCACCAAACTCGCCGGACTCTGATTCTAGAGTCAGCACCCTCTCAGTCCGTCAACCTCCACAGGCTCTCCGACTCCGATTCCGGAATCGTTGAAGTTAGTTTGGAGAGACCCCAAGTGAGAAATGCAATAGGGAAAGATATGCTCAAAGGTTTGAAGAACACGTTTGAAGCTATCAGTAAAGATTCATCTGCTAATGTTTTGTTGATCCGCAGTAAAGTTCCCAAGGTGTTCTGTGCAGGAGCAGATTTGAAGGAACGCAAGATGATGAGTGCAACTGAGGTTCAAGATTTCGTGAACAAGCTGCGTGCCACATTCTCATTTCTAGAGGTACTTCCCATTCCTACCATCGCTGTCATTGAAGGGGCAGCATTGGGTGGTGGACTTGAAATGGCTTTATCATGCGATCTTCGGATATGTGGAGAAGATGCAGTATTGGGATTGCCAGAAACTGGACTTGCTATAATTCCCGGGGCAGGTGGGACTCAACGACTTCCTAGAGTGGTTGGAAGATCAATAGCAAAGGAACTCATATTGACTGGGAGGAAGATTGGTGGCAGAGAAGCAATGTCAATGGGTCTGGTAAATTACTGTGTCCATGCTGGTGAAGCTCATCTAAAGGCACTTGAAGTTGCTCGCAATATAAATGAGAAGGGTCCAATAGCAATAAGGATGGCGAAAAGAGCTATTGACCAGGGACTTGAGGTAGATAGGGCATCAGCTTTGGCACTGGAAGAAGAATGCTATGAGCAGACCTTGCACACAGAAGATCGTTTGGAAGCCCTGGCAGCATTTGCTGAGAAGCGGAAGCCAAGGTATACTGGAAAATAA

Protein Analysis

437

Amino Acids

48.15

Weight (kDa)

9.22

Isoelectric Point (pI)

47.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ECH_1 PF00378 188 - 436 3.2e-61 Enoyl-CoA hydratase/isomerase
ECH_2 PF16113 194 - 364 1.4e-31 Enoyl-CoA hydratase/isomerase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0013516)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 950
Acc36I ACCTGC 1 cut(s) 950
AccB1I GGYRCC 1 cut(s) 208
AccB7I CCANNNNNTGG 2 cut(s) 480, 935
AccI GTMKAC 1 cut(s) 1301
AccII CGCG 1 cut(s) 284
AccIII TCCGGA 1 cut(s) 566
AciI CCGC 3 cut(s) 284, 694, 1288
AclWI GGATC 1 cut(s) 685
AcoI YGGCCR 1 cut(s) 96
AcsI RAATTY 2 cut(s) 29, 454
AfaI GTAC 1 cut(s) 816
AfiI CCNNNNNNNGG 3 cut(s) 480, 935, 959
AflIII ACRYGT 1 cut(s) 645
AhlI ACTAGT 1 cut(s) 22
AjnI CCWGG 3 cut(s) 467, 1176, 1266
AluBI AGCT 6 cut(s) 79, 656, 787, 1094, 1169, 1205
AluI AGCT 6 cut(s) 79, 656, 787, 1094, 1169, 1205
Alw21I GWGCWC 2 cut(s) 152, 271
Alw26I GTCTC 1 cut(s) 586
Alw44I GTGCAC 1 cut(s) 267
AlwI GGATC 1 cut(s) 685
AlwNI CAGNNNCTG 3 cut(s) 191, 358, 935
Ama87I CYCGRG 1 cut(s) 953
Aor13HI TCCGGA 1 cut(s) 566
AoxI GGCC 3 cut(s) 96, 117, 470
ApaLI GTGCAC 1 cut(s) 267
ApeKI GCWGC 3 cut(s) 787, 851, 1271
ApoI RAATTY 2 cut(s) 29, 454
AspS9I GGNCC 3 cut(s) 188, 471, 1139
AsuC2I CCSGG 2 cut(s) 954, 955
AsuHPI GGTGA 2 cut(s) 479, 1100
AvaI CYCGRG 1 cut(s) 953
AvaII GGWCC 2 cut(s) 188, 1139
BaeGI GKGCMC 1 cut(s) 271
BalI TGGCCA 1 cut(s) 98
BanI GGYRCC 1 cut(s) 208
Bbv12I GWGCWC 2 cut(s) 152, 271
BbvI GCAGC 3 cut(s) 774, 863, 1283
BccI CCATC 3 cut(s) 327, 839, 1150
BciT130I CCWGG 3 cut(s) 469, 1178, 1268
BcnI CCSGG 2 cut(s) 954, 955
BcoDI GTCTC 1 cut(s) 586
BcuI ACTAGT 1 cut(s) 22
BfaI CTAG 7 cut(s) 23, 80, 255, 321, 512, 809, 981
BfuAI ACCTGC 1 cut(s) 950
BisI GCNGC 4 cut(s) 285, 788, 852, 1272
BlsI GCNGC 4 cut(s) 286, 789, 853, 1273
Bme1390I CCNGG 5 cut(s) 469, 954, 955, 1178, 1268
Bme18I GGWCC 2 cut(s) 188, 1139
BmeT110I CYCGRG 1 cut(s) 953
BmgT120I GGNCC 3 cut(s) 188, 471, 1139
BmiI GGNNCC 3 cut(s) 210, 252, 1140
BmrFI CCNGG 5 cut(s) 469, 954, 955, 1178, 1268
BmrI ACTGGG 1 cut(s) 1032
BmsI GCATC 3 cut(s) 282, 901, 1208
BmuI ACTGGG 1 cut(s) 1032
BpmI CTGGAG 1 cut(s) 293
BpuEI CTTGAG 1 cut(s) 1205
BpuMI CCSGG 2 cut(s) 954, 955
BsaI GGTCTC 1 cut(s) 586
BsaJI CCNNGG 8 cut(s) 204, 467, 708, 953, 954, 1177, 1266, 1295
BsaWI WCCGGW 1 cut(s) 566
BsaXI ACNNNNNCTCC 2 cut(s) 536, 566
Bsc4I CCNNNNNNNGG 3 cut(s) 480, 935, 959
Bse1I ACTGG 6 cut(s) 276, 352, 940, 1027, 1218, 1309
Bse3DI GCAATG 1 cut(s) 1056
BseAI TCCGGA 1 cut(s) 566
BseBI CCWGG 3 cut(s) 469, 1178, 1268
BseDI CCNNGG 8 cut(s) 204, 467, 708, 953, 954, 1177, 1266, 1295
BseGI GGATG 1 cut(s) 1161
BseLI CCNNNNNNNGG 3 cut(s) 480, 935, 959
BseMI GCAATG 1 cut(s) 1056
BseMII CTCAG 5 cut(s) 302, 430, 542, 753, 1272
BseNI ACTGG 6 cut(s) 276, 352, 940, 1027, 1218, 1309
BseSI GKGCMC 1 cut(s) 271
BseXI GCAGC 3 cut(s) 774, 863, 1283
BsgI GTGCAG 1 cut(s) 741
Bsh1236I CGCG 1 cut(s) 284
BshFI GGCC 3 cut(s) 98, 119, 472
BshNI GGYRCC 1 cut(s) 208
BsiHKAI GWGCWC 2 cut(s) 152, 271
BsiHKCI CYCGRG 1 cut(s) 953
BsiSI CCGG 4 cut(s) 243, 499, 567, 954
BslFI GGGAC 3 cut(s) 397, 979, 1194
BslI CCNNNNNNNGG 3 cut(s) 480, 935, 959
BsmAI GTCTC 1 cut(s) 586
BsmFI GGGAC 3 cut(s) 397, 979, 1194
BsmI GAATGC 1 cut(s) 1229
BsnI GGCC 3 cut(s) 98, 119, 472
Bso31I GGTCTC 1 cut(s) 586
BsoBI CYCGRG 1 cut(s) 953
Bsp1286I GDGCHC 2 cut(s) 152, 271
Bsp13I TCCGGA 1 cut(s) 566
Bsp143I GATC 5 cut(s) 37, 690, 889, 995, 1252
BspACI CCGC 3 cut(s) 284, 694, 1288
BspANI GGCC 3 cut(s) 98, 119, 472
BspCNI CTCAG 5 cut(s) 301, 429, 541, 754, 1273
BspEI TCCGGA 1 cut(s) 566
BspFNI CGCG 1 cut(s) 284
BspLI GGNNCC 3 cut(s) 210, 252, 1140
BspMI ACCTGC 1 cut(s) 950
BspPI GGATC 1 cut(s) 685
BspT107I GGYRCC 1 cut(s) 208
BspTNI GGTCTC 1 cut(s) 586
BsrDI GCAATG 1 cut(s) 1056
BsrI ACTGG 6 cut(s) 276, 352, 940, 1027, 1218, 1309
BssECI CCNNGG 8 cut(s) 204, 467, 708, 953, 954, 1177, 1266, 1295
BssMI GATC 5 cut(s) 37, 690, 889, 995, 1252
BssNAI GTATAC 1 cut(s) 1302
BssT1I CCWWGG 3 cut(s) 204, 708, 1295
Bst1107I GTATAC 1 cut(s) 1302
Bst2UI CCWGG 3 cut(s) 469, 1178, 1268
Bst4CI ACNGT 1 cut(s) 1076
Bst6I CTCTTC 1 cut(s) 205
BstAPI GCANNNNNTGC 2 cut(s) 1240, 1277
BstC8I GCNNGC 3 cut(s) 339, 792, 1120
BstDEI CTNAG 6 cut(s) 288, 404, 416, 528, 762, 1281
BstF5I GGATG 1 cut(s) 1161
BstFNI CGCG 1 cut(s) 284
BstKTI GATC 5 cut(s) 40, 693, 892, 998, 1255
BstMAI GTCTC 1 cut(s) 586
BstMBI GATC 5 cut(s) 37, 690, 889, 995, 1252
BstMWI GCNNNNNNNGC 6 cut(s) 85, 1091, 1166, 1240, 1271, 1277
BstNI CCWGG 3 cut(s) 469, 1178, 1268
BstSCI CCNGG 5 cut(s) 467, 952, 953, 1176, 1266
BstSLI GKGCMC 1 cut(s) 271
BstUI CGCG 1 cut(s) 284
BstV1I GCAGC 3 cut(s) 774, 863, 1283
BstZ17I GTATAC 1 cut(s) 1302
BsuRI GGCC 3 cut(s) 98, 119, 472
BtgZI GCGATG 2 cut(s) 265, 817
BtsCI GGATG 1 cut(s) 1161
BtsI GCAGTG 2 cut(s) 228, 356
BtsIMutI CAGTG 5 cut(s) 228, 269, 356, 374, 1211
BveI ACCTGC 1 cut(s) 950
Cac8I GCNNGC 3 cut(s) 339, 792, 1120
CaiI CAGNNNCTG 3 cut(s) 191, 358, 935
Cfr13I GGNCC 3 cut(s) 188, 471, 1139
Cfr9I CCCGGG 1 cut(s) 953
Csp6I GTAC 1 cut(s) 815
CviAII CATG 4 cut(s) 100, 385, 885, 1082
CviQI GTAC 1 cut(s) 815
DdeI CTNAG 6 cut(s) 288, 404, 416, 528, 762, 1281
DpnI GATC 5 cut(s) 39, 692, 891, 997, 1254
DpnII GATC 5 cut(s) 37, 690, 889, 995, 1252
EaeI YGGCCR 1 cut(s) 96
Eam1104I CTCTTC 1 cut(s) 205
EarI CTCTTC 1 cut(s) 205
Eco130I CCWWGG 3 cut(s) 204, 708, 1295
Eco31I GGTCTC 1 cut(s) 586
Eco32I GATATC 1 cut(s) 166
Eco47I GGWCC 2 cut(s) 188, 1139
Eco88I CYCGRG 1 cut(s) 953
EcoO109I RGGNCCY 1 cut(s) 188
EcoRI GAATTC 1 cut(s) 454
EcoRII CCWGG 3 cut(s) 467, 1176, 1266
EcoRV GATATC 1 cut(s) 166
EcoT14I CCWWGG 3 cut(s) 204, 708, 1295
ErhI CCWWGG 3 cut(s) 204, 708, 1295
FaeI CATG 4 cut(s) 103, 388, 888, 1085
FaqI GGGAC 3 cut(s) 397, 979, 1194
FatI CATG 4 cut(s) 99, 384, 884, 1081
FblI GTMKAC 1 cut(s) 1301
Fnu4HI GCNGC 4 cut(s) 285, 788, 852, 1272
FokI GGATG 1 cut(s) 1168
Fsp4HI GCNGC 4 cut(s) 285, 788, 852, 1272
FspBI CTAG 7 cut(s) 23, 80, 255, 321, 512, 809, 981
GluI GCNGC 4 cut(s) 285, 788, 852, 1272
GsuI CTGGAG 1 cut(s) 293
HaeIII GGCC 3 cut(s) 98, 119, 472
HapII CCGG 4 cut(s) 243, 499, 567, 954
Hin1II CATG 4 cut(s) 103, 388, 888, 1085
HincII GTYRAC 1 cut(s) 538
HindII GTYRAC 1 cut(s) 538
HpaII CCGG 4 cut(s) 243, 499, 567, 954
HphI GGTGA 2 cut(s) 479, 1100
Hpy166II GTNNAC 5 cut(s) 269, 538, 781, 866, 1302
Hpy188I TCNGA 7 cut(s) 291, 398, 419, 507, 556, 562, 897
Hpy188III TCNNGA 8 cut(s) 169, 186, 449, 512, 567, 770, 778, 809
Hpy8I GTNNAC 5 cut(s) 269, 538, 781, 866, 1302
HpyAV CCTTC 3 cut(s) 730, 839, 1129
HpyCH4III ACNGT 1 cut(s) 1076
HpyCH4IV ACGT 1 cut(s) 647
HpyCH4V TGCA 6 cut(s) 269, 611, 722, 758, 914, 1243
HpyF10VI GCNNNNNNNGC 6 cut(s) 85, 1091, 1166, 1240, 1271, 1277
HpyF3I CTNAG 6 cut(s) 288, 404, 416, 528, 762, 1281
HpySE526I ACGT 1 cut(s) 647
Hsp92II CATG 4 cut(s) 103, 388, 888, 1085
Kpn2I TCCGGA 1 cut(s) 566
Kzo9I GATC 5 cut(s) 37, 690, 889, 995, 1252
LmnI GCTCC 2 cut(s) 250, 725
Lsp1109I GCAGC 3 cut(s) 774, 863, 1283
LweI GCATC 3 cut(s) 282, 901, 1208
MaeI CTAG 7 cut(s) 23, 80, 255, 321, 512, 809, 981
MaeII ACGT 1 cut(s) 647
MaeIII GTNAC 1 cut(s) 354
MalI GATC 5 cut(s) 39, 692, 891, 997, 1254
MboI GATC 5 cut(s) 37, 690, 889, 995, 1252
MhlI GDGCHC 2 cut(s) 152, 271
MlsI TGGCCA 1 cut(s) 98
MluCI AATT 5 cut(s) 29, 153, 454, 948, 1069
MluNI TGGCCA 1 cut(s) 98
MlyI GAGTC 7 cut(s) 191, 270, 357, 496, 524, 551, 961
MmeI TCCRAC 2 cut(s) 579, 970
MnlI CCTC 9 cut(s) 268, 425, 448, 535, 551, 757, 805, 1020, 1180
Mox20I TGGCCA 1 cut(s) 98
MroI TCCGGA 1 cut(s) 566
MscI TGGCCA 1 cut(s) 98
MseI TTAA 3 cut(s) 74, 122, 329
MslI CAYNNNNRTG 1 cut(s) 1086
Msp20I TGGCCA 1 cut(s) 98
MspI CCGG 4 cut(s) 243, 499, 567, 954
MspR9I CCNGG 5 cut(s) 469, 954, 955, 1178, 1268
Mva1269I GAATGC 1 cut(s) 1229
MvaI CCWGG 3 cut(s) 469, 1178, 1268
MvnI CGCG 1 cut(s) 284
MwoI GCNNNNNNNGC 6 cut(s) 85, 1091, 1166, 1240, 1271, 1277
NciI CCSGG 2 cut(s) 954, 955
NdeII GATC 5 cut(s) 37, 690, 889, 995, 1252
NlaIII CATG 4 cut(s) 103, 388, 888, 1085
NlaIV GGNNCC 3 cut(s) 210, 252, 1140
NmuCI GTSAC 1 cut(s) 354
PaqCI CACCTGC 1 cut(s) 950
PctI GAATGC 1 cut(s) 1229
PfeI GAWTC 6 cut(s) 107, 182, 508, 563, 570, 668
PflMI CCANNNNNTGG 2 cut(s) 480, 935
PkrI GCNGC 4 cut(s) 286, 789, 853, 1273
PleI GAGTC 7 cut(s) 191, 269, 356, 496, 523, 551, 961
PpsI GAGTC 7 cut(s) 191, 269, 356, 496, 523, 551, 961
PpuMI RGGWCCY 1 cut(s) 188
Psp5II RGGWCCY 1 cut(s) 188
Psp6I CCWGG 3 cut(s) 467, 1176, 1266
PspGI CCWGG 3 cut(s) 467, 1176, 1266
PspN4I GGNNCC 3 cut(s) 210, 252, 1140
PspPI GGNCC 3 cut(s) 188, 471, 1139
PspPPI RGGWCCY 1 cut(s) 188
PstNI CAGNNNCTG 3 cut(s) 191, 358, 935
RsaI GTAC 1 cut(s) 816
RsaNI GTAC 1 cut(s) 815
RseI CAYNNNNRTG 1 cut(s) 1086
SaqAI TTAA 3 cut(s) 74, 122, 329
SatI GCNGC 4 cut(s) 285, 788, 852, 1272
Sau3AI GATC 5 cut(s) 37, 690, 889, 995, 1252
Sau96I GGNCC 3 cut(s) 188, 471, 1139
SchI GAGTC 7 cut(s) 191, 270, 357, 496, 524, 551, 961
ScrFI CCNGG 5 cut(s) 469, 954, 955, 1178, 1268
SduI GDGCHC 2 cut(s) 152, 271
SfaNI GCATC 3 cut(s) 282, 901, 1208
SinI GGWCC 2 cut(s) 188, 1139
SmaI CCCGGG 1 cut(s) 955
SmiMI CAYNNNNRTG 1 cut(s) 1086
SmlI CTYRAG 1 cut(s) 1184
SmoI CTYRAG 1 cut(s) 1184
SpeI ACTAGT 1 cut(s) 22
Sse9I AATT 5 cut(s) 29, 153, 454, 948, 1069
SsiI CCGC 3 cut(s) 284, 694, 1288
SspMI CTAG 7 cut(s) 23, 80, 255, 321, 512, 809, 981
StyD4I CCNGG 5 cut(s) 467, 952, 953, 1176, 1266
StyI CCWWGG 3 cut(s) 204, 708, 1295
TaaI ACNGT 1 cut(s) 1076
TaiI ACGT 1 cut(s) 650
TaqI TCGA 1 cut(s) 259
TasI AATT 5 cut(s) 29, 153, 454, 948, 1069
TauI GCSGC 1 cut(s) 287
TfiI GAWTC 6 cut(s) 107, 182, 508, 563, 570, 668
Tru1I TTAA 3 cut(s) 74, 122, 329
Tru9I TTAA 3 cut(s) 74, 122, 329
TscAI CASTG 5 cut(s) 228, 276, 363, 374, 1218
TseFI GTSAC 1 cut(s) 354
TseI GCWGC 3 cut(s) 787, 851, 1271
Tsp45I GTSAC 1 cut(s) 354
TspDTI ATGAA 2 cut(s) 72, 660
TspGWI ACGGA 1 cut(s) 523
TspMI CCCGGG 1 cut(s) 953
TspRI CASTG 5 cut(s) 228, 276, 363, 374, 1218
Van91I CCANNNNNTGG 2 cut(s) 480, 935
VneI GTGCAC 1 cut(s) 267
VpaK11BI GGWCC 2 cut(s) 188, 1139
XapI RAATTY 2 cut(s) 29, 454
XbaI TCTAGA 2 cut(s) 511, 808
XmaI CCCGGG 1 cut(s) 953
XmiI GTMKAC 1 cut(s) 1301
XspI CTAG 7 cut(s) 23, 80, 255, 321, 512, 809, 981
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.