Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003396.1

Orthogroup ID

OG0011738

Physical Location & Seq

Genomic Coordinates Forward (+)

37742 .. 40455

Gene Structure 2714 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003396.1_g000009.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1722 bp

atgggatggggccgagagtgtggccggggtagcgatacagagctgcaagcgcacgggctcgcaggctgcagcgaagaagcgcagggacgcgtagcccggggagcgcgagggcaggctgcagagaaggctcagctagctcgagctaggggctgcggtggtgaaagaagattttcgggtttttgtactcaactgatccacacacaatcagcaccaaacaatgttgtcagagccatctgtgattctttcagaaccggttggaactgggatgctctgacatcaagatttgattctctcaaattagatggaaagcttgttgagagtgtgttgttagaactgaaggaaccagttgatgcaaaacgtgctctgggtttcttccactgggcatcaaacaggaaagggtttgatcatgaggtctggtcctactccatagccattcatattttggtcagagccaagatggtcatggatgctagagctttgatcgaatcggttttgaagaagaatgttggaaatgagttgaagttttcggtggtggattcgttacttagtagttacgaggtcactgcttcgaacccttttgtgtttgatttgcttgtacaggcttatgctaaaatgagaatgtttgagactggttttgatgtttgttgctatttgagggatcgtgggttgcctttaagtcttacaagttacaatagtttgcttcgagttgttcaaagatcggaccgaaatggtctggtttggaagatttatgagcatattgtggaaaggaggagttatccgaatgatgagacggtgaggatcttgattgatgctttgtgcaaggaaggggagttgcggaaatgtgctgacatgttggagaggattcatgggaagaaatgttctccttctgtgattgtgaatgctagtttggtttttaggattttggaggagggtagagttgaagaaggtgtggtattgttgaagagaatgttgcagaagaatatggttcttgatacgattgcttactcattgattgttcatgctaaagttaaactaggaaatttaagctctgcacagcaggtgtatgaagaaatgcttaagagaggttttcgagcaaactcttttgtttataccttgttcattgaggcttattgtaaagctgaaagaattgatgaagcacaatccatgatgaatgagatgggaaatatggatttgaagccatatgctgagagctataattttcttattgagggatgtgctagagctggtagagtggaagaaagtgtgagttacttgaagcagatggtggagagcaggttcattcctagtcttggggctttcaatgagatggttggaaagctatgcgaaattggggatgtggaccaagccaatgtgatgttaacgatactgttagataaagggttcttaccgaatgacattacatactctcttctgattgacgggtatgcgagaaaaggggagaatgatgaagttctgaagctctattatgagatggagtccaggtcacttcctcctggaatattggtttttacatcattgataaaaagcttttgccaatgcgggaaattggaggaagcaaacaagtatttcagaatcatgaaagatcgatcaatagccccaagtttatctacatatgagacattgattgcgaaccactttgagcagggaaatacagagaaggctgattgcttgccttgcaatgaaatggttttacaggactga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko05134 map05134

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

573

Amino Acids

64.68

Weight (kDa)

6.56

Isoelectric Point (pI)

36.22

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011738)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G66345
fragaria_vesca	FvH4_5g33100 FvH4_5g33100
prunus_persica	Prupe.4G237400_v2.0.a1
pyrus_communis	pycom11g17530
rosa_chinensis	RchiOBHm_Chr7g0231271 RchiOBHm_Chr7g0231291
rosa_laevigata	RLG00000001422
rosa_multiflora	Rmu_co8271321.1_g000001 Rmu_sc0003396.1_g000009 Rmu_sc0004571.1_g000005
rosa_rugosa	Rorug07G0266200
rosa_samantha	Rh7AG419400 Rh7AG419600 Rh7BG394600 Rh7CG439100 Rh7CG439200 Rh7DG413000
rosa_wichuraiana	Rw7G034670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1048
Acc36I	ACCTGC	2 cut(s)	1048, 1284
AccII	CGCG	2 cut(s)	90, 106
AciI	CCGC	3 cut(s)	153, 835, 1560
AclWI	GGATC	3 cut(s)	187, 666, 806
AcoI	YGGCCR	1 cut(s)	22
AcsI	RAATTY	1 cut(s)	1039
AcuI	CTGAAG	2 cut(s)	356, 1496
AfaI	GTAC	2 cut(s)	184, 597
AfiI	CCNNNNNNNGG	1 cut(s)	1310
AflII	CTTAAG	1 cut(s)	1076
AflIII	ACRYGT	2 cut(s)	88, 849
AgeI	ACCGGT	1 cut(s)	251
AgsI	TTSAA	8 cut(s)	496, 520, 713, 941, 961, 1195, 1276, 1321
AjnI	CCWGG	2 cut(s)	1499, 1513
AjuI	GAANNNNNNNTTGG	2 cut(s)	890, 922
AloI	GAACNNNNNNTCC	4 cut(s)	862, 894, 1280, 1312
Alw21I	GWGCWC	1 cut(s)	364
Alw26I	GTCTC	3 cut(s)	620, 782, 1631
AlwI	GGATC	3 cut(s)	187, 666, 806
Ama87I	CYCGRG	2 cut(s)	96, 138
AoxI	GGCC	2 cut(s)	10, 22
ApeKI	GCWGC	5 cut(s)	43, 66, 69, 116, 150
ApoI	RAATTY	1 cut(s)	1039
AsiGI	ACCGGT	1 cut(s)	251
Asp700I	GAANNNNTTC	1 cut(s)	169
AspLEI	GCGC	3 cut(s)	52, 82, 106
AspS9I	GGNCC	4 cut(s)	10, 417, 721, 1360
AsuC2I	CCSGG	3 cut(s)	26, 97, 98
AsuHPI	GGTGA	2 cut(s)	170, 805
AsuII	TTCGAA	1 cut(s)	569
AsuNHI	GCTAGC	1 cut(s)	133
AvaI	CYCGRG	2 cut(s)	96, 138
AvaII	GGWCC	3 cut(s)	417, 721, 1360
BanII	GRGCYC	1 cut(s)	60
Bbv12I	GWGCWC	1 cut(s)	364
BbvI	GCAGC	5 cut(s)	30, 53, 81, 103, 137
BccI	CCATC	7 cut(s)	239, 296, 451, 1171, 1276, 1321, 1486
BcgI	CGANNNNNNTGC	2 cut(s)	545, 579
BciT130I	CCWGG	2 cut(s)	1501, 1515
BclI	TGATCA	1 cut(s)	403
BcnI	CCSGG	3 cut(s)	26, 97, 98
BcoDI	GTCTC	3 cut(s)	620, 782, 1631
BfaI	CTAG	7 cut(s)	134, 144, 471, 903, 1034, 1239, 1305
BfmI	CTRYAG	2 cut(s)	67, 117
BfrI	CTTAAG	1 cut(s)	1076
BfuAI	ACCTGC	2 cut(s)	1048, 1284
BisI	GCNGC	5 cut(s)	44, 67, 70, 117, 151
BlpI	GCTNAGC	1 cut(s)	129
BlsI	GCNGC	5 cut(s)	45, 68, 71, 118, 152
Bme1390I	CCNGG	5 cut(s)	26, 97, 98, 1501, 1515
Bme18I	GGWCC	3 cut(s)	417, 721, 1360
BmeT110I	CYCGRG	2 cut(s)	96, 138
BmgT120I	GGNCC	4 cut(s)	10, 417, 721, 1360
BmiI	GGNNCC	2 cut(s)	11, 342
BmrFI	CCNGG	5 cut(s)	26, 97, 98, 1501, 1515
BmrI	ACTGGG	2 cut(s)	271, 388
BmsI	GCATC	5 cut(s)	256, 340, 392, 457, 799
BmtI	GCTAGC	1 cut(s)	137
BmuI	ACTGGG	2 cut(s)	271, 388
Bpu1102I	GCTNAGC	1 cut(s)	129
Bpu14I	TTCGAA	1 cut(s)	569
BpuMI	CCSGG	3 cut(s)	26, 97, 98
Bsa29I	ATCGAT	1 cut(s)	1606
BsaJI	CCNNGG	3 cut(s)	25, 96, 97
BsaWI	WCCGGW	1 cut(s)	251
BsaXI	ACNNNNNCTCC	4 cut(s)	1280, 1310, 1487, 1517
Bsc4I	CCNNNNNNNGG	1 cut(s)	1310
Bse118I	RCCGGY	1 cut(s)	251
Bse1I	ACTGG	4 cut(s)	266, 344, 383, 634
Bse3DI	GCAATG	1 cut(s)	1705
BseBI	CCWGG	2 cut(s)	1501, 1515
BseCI	ATCGAT	1 cut(s)	1606
BseDI	CCNNGG	3 cut(s)	25, 96, 97
BseGI	GGATG	5 cut(s)	11, 271, 472, 1238, 1360
BseLI	CCNNNNNNNGG	1 cut(s)	1310
BseMI	GCAATG	1 cut(s)	1705
BseMII	CTCAG	2 cut(s)	143, 1197
BseNI	ACTGG	4 cut(s)	266, 344, 383, 634
BseRI	GAGGAG	2 cut(s)	784, 941
BseXI	GCAGC	5 cut(s)	30, 53, 81, 103, 137
BsgI	GTGCAG	1 cut(s)	1035
Bsh1236I	CGCG	2 cut(s)	90, 106
BshFI	GGCC	2 cut(s)	12, 24
BshTI	ACCGGT	1 cut(s)	251
BshVI	ATCGAT	1 cut(s)	1606
BsiHKAI	GWGCWC	1 cut(s)	364
BsiHKCI	CYCGRG	2 cut(s)	96, 138
BsiSI	CCGG	3 cut(s)	25, 97, 252
BslFI	GGGAC	1 cut(s)	99
BslI	CCNNNNNNNGG	1 cut(s)	1310
BsmAI	GTCTC	3 cut(s)	620, 782, 1631
BsmBI	CGTCTC	1 cut(s)	782
BsmFI	GGGAC	1 cut(s)	99
BsmI	GAATGC	1 cut(s)	904
BsnI	GGCC	2 cut(s)	12, 24
BsoBI	CYCGRG	2 cut(s)	96, 138
Bsp119I	TTCGAA	1 cut(s)	569
Bsp1286I	GDGCHC	2 cut(s)	60, 364
Bsp1407I	TGTACA	1 cut(s)	595
Bsp143I	GATC	8 cut(s)	192, 403, 480, 658, 716, 798, 1603, 1607
Bsp1720I	GCTNAGC	1 cut(s)	129
BspACI	CCGC	3 cut(s)	153, 835, 1560
BspANI	GGCC	2 cut(s)	12, 24
BspCNI	CTCAG	2 cut(s)	142, 1198
BspDI	ATCGAT	1 cut(s)	1606
BspFNI	CGCG	2 cut(s)	90, 106
BspHI	TCATGA	2 cut(s)	406, 1596
BspLI	GGNNCC	2 cut(s)	11, 342
BspMAI	CTGCAG	2 cut(s)	71, 121
BspMI	ACCTGC	2 cut(s)	1048, 1284
BspOI	GCTAGC	1 cut(s)	137
BspPI	GGATC	3 cut(s)	187, 666, 806
BspT104I	TTCGAA	1 cut(s)	569
BspTI	CTTAAG	1 cut(s)	1076
BsrDI	GCAATG	1 cut(s)	1705
BsrFI	RCCGGY	1 cut(s)	251
BsrGI	TGTACA	1 cut(s)	595
BsrI	ACTGG	4 cut(s)	266, 344, 383, 634
BssAI	RCCGGY	1 cut(s)	251
BssECI	CCNNGG	3 cut(s)	25, 96, 97
BssMI	GATC	8 cut(s)	192, 403, 480, 658, 716, 798, 1603, 1607
Bst2UI	CCWGG	2 cut(s)	1501, 1515
Bst4CI	ACNGT	2 cut(s)	793, 1389
Bst6I	CTCTTC	2 cut(s)	956, 1434
BstAFI	CTTAAG	1 cut(s)	1076
BstAPI	GCANNNNNTGC	1 cut(s)	359
BstAUI	TGTACA	1 cut(s)	595
BstBI	TTCGAA	1 cut(s)	569
BstC8I	GCNNGC	6 cut(s)	48, 60, 64, 114, 135, 1691
BstDEI	CTNAG	3 cut(s)	129, 545, 1206
BstF5I	GGATG	5 cut(s)	11, 271, 472, 1238, 1360
BstFNI	CGCG	2 cut(s)	90, 106
BstHHI	GCGC	3 cut(s)	52, 82, 106
BstKTI	GATC	8 cut(s)	195, 406, 483, 661, 719, 801, 1606, 1610
BstMAI	GTCTC	3 cut(s)	620, 782, 1631
BstMBI	GATC	8 cut(s)	192, 403, 480, 658, 716, 798, 1603, 1607
BstMWI	GCNNNNNNNGC	7 cut(s)	30, 49, 101, 125, 134, 359, 1695
BstNI	CCWGG	2 cut(s)	1501, 1515
BstNSI	RCATGY	1 cut(s)	853
BstSCI	CCNGG	5 cut(s)	24, 95, 96, 1499, 1513
BstSFI	CTRYAG	2 cut(s)	67, 117
BstUI	CGCG	2 cut(s)	90, 106
BstV1I	GCAGC	5 cut(s)	30, 53, 81, 103, 137
BstX2I	RGATCY	1 cut(s)	798
BstYI	RGATCY	1 cut(s)	798
Bsu15I	ATCGAT	1 cut(s)	1606
BsuRI	GGCC	2 cut(s)	12, 24
BsuTUI	ATCGAT	1 cut(s)	1606
BtsCI	GGATG	5 cut(s)	11, 271, 472, 1238, 1360
BtsI	GCAGTG	1 cut(s)	561
BtsIMutI	CAGTG	2 cut(s)	376, 561
BveI	ACCTGC	2 cut(s)	1048, 1284
Cac8I	GCNNGC	6 cut(s)	48, 60, 64, 114, 135, 1691
CciI	TCATGA	2 cut(s)	406, 1596
CfoI	GCGC	3 cut(s)	52, 82, 106
Cfr10I	RCCGGY	1 cut(s)	251
Cfr13I	GGNCC	4 cut(s)	10, 417, 721, 1360
Cfr9I	CCCGGG	1 cut(s)	96
ClaI	ATCGAT	1 cut(s)	1606
CpoI	CGGWCCG	1 cut(s)	721
CseI	GACGC	1 cut(s)	96
Csp6I	GTAC	2 cut(s)	183, 596
CspAI	ACCGGT	1 cut(s)	251
CspI	CGGWCCG	1 cut(s)	721
CviAII	CATG	7 cut(s)	407, 463, 850, 866, 1019, 1165, 1597
CviQI	GTAC	2 cut(s)	183, 596
DdeI	CTNAG	3 cut(s)	129, 545, 1206
DpnI	GATC	8 cut(s)	194, 405, 482, 660, 718, 800, 1605, 1609
DpnII	GATC	8 cut(s)	192, 403, 480, 658, 716, 798, 1603, 1607
EaeI	YGGCCR	1 cut(s)	22
Eam1104I	CTCTTC	2 cut(s)	956, 1434
EarI	CTCTTC	2 cut(s)	956, 1434
Eco24I	GRGCYC	1 cut(s)	60
Eco47I	GGWCC	3 cut(s)	417, 721, 1360
Eco57I	CTGAAG	2 cut(s)	356, 1496
Eco88I	CYCGRG	2 cut(s)	96, 138
EcoRII	CCWGG	2 cut(s)	1499, 1513
EcoT38I	GRGCYC	1 cut(s)	60
Esp3I	CGTCTC	1 cut(s)	782
FaeI	CATG	7 cut(s)	410, 466, 853, 869, 1022, 1168, 1600
FalI	AAGNNNNNCTT	2 cut(s)	1059, 1091
FaqI	GGGAC	1 cut(s)	99
FatI	CATG	7 cut(s)	406, 462, 849, 865, 1018, 1164, 1596
FauI	CCCGC	1 cut(s)	1553
FauNDI	CATATG	2 cut(s)	1201, 1633
FbaI	TGATCA	1 cut(s)	403
Fnu4HI	GCNGC	5 cut(s)	44, 67, 70, 117, 151
FokI	GGATG	5 cut(s)	18, 278, 479, 1245, 1367
FriOI	GRGCYC	1 cut(s)	60
Fsp4HI	GCNGC	5 cut(s)	44, 67, 70, 117, 151
FspBI	CTAG	7 cut(s)	134, 144, 471, 903, 1034, 1239, 1305
GlaI	GCGC	3 cut(s)	51, 81, 105
GluI	GCNGC	5 cut(s)	44, 67, 70, 117, 151
HaeIII	GGCC	2 cut(s)	12, 24
HapII	CCGG	3 cut(s)	25, 97, 252
HgaI	GACGC	1 cut(s)	96
HhaI	GCGC	3 cut(s)	52, 82, 106
Hin1II	CATG	7 cut(s)	410, 466, 853, 869, 1022, 1168, 1600
Hin6I	GCGC	3 cut(s)	50, 80, 104
HinP1I	GCGC	3 cut(s)	50, 80, 104
HincII	GTYRAC	1 cut(s)	1380
HindII	GTYRAC	1 cut(s)	1380
HindIII	AAGCTT	2 cut(s)	308, 1546
HinfI	GANTC	7 cut(s)	239, 287, 485, 536, 862, 1496, 1593
HpaI	GTTAAC	1 cut(s)	1380
HpaII	CCGG	3 cut(s)	25, 97, 252
HphI	GGTGA	2 cut(s)	170, 805
Hpy166II	GTNNAC	2 cut(s)	1360, 1380
Hpy188I	TCNGA	9 cut(s)	227, 248, 273, 449, 721, 780, 1434, 1476, 1592
Hpy188III	TCNNGA	5 cut(s)	279, 407, 802, 989, 1597
Hpy8I	GTNNAC	2 cut(s)	1360, 1380
HpyAV	CCTTC	6 cut(s)	118, 331, 818, 894, 938, 1672
HpyCH4III	ACNGT	2 cut(s)	793, 1389
HpyCH4IV	ACGT	1 cut(s)	358
HpyCH4V	TGCA	8 cut(s)	46, 69, 119, 353, 819, 973, 1052, 1698
HpyF10VI	GCNNNNNNNGC	7 cut(s)	30, 49, 101, 125, 134, 359, 1695
HpyF3I	CTNAG	3 cut(s)	129, 545, 1206
HpySE526I	ACGT	1 cut(s)	358
Hsp92II	CATG	7 cut(s)	410, 466, 853, 869, 1022, 1168, 1600
HspAI	GCGC	3 cut(s)	50, 80, 104
Ksp22I	TGATCA	1 cut(s)	403
KspAI	GTTAAC	1 cut(s)	1380
Kzo9I	GATC	8 cut(s)	192, 403, 480, 658, 716, 798, 1603, 1607
LmnI	GCTCC	1 cut(s)	101
Lsp1109I	GCAGC	5 cut(s)	30, 53, 81, 103, 137
LweI	GCATC	5 cut(s)	256, 340, 392, 457, 799
MaeI	CTAG	7 cut(s)	134, 144, 471, 903, 1034, 1239, 1305
MaeII	ACGT	1 cut(s)	358
MaeIII	GTNAC	6 cut(s)	540, 551, 559, 686, 1268, 1503
MalI	GATC	8 cut(s)	194, 405, 482, 660, 718, 800, 1605, 1609
MboI	GATC	8 cut(s)	192, 403, 480, 658, 716, 798, 1603, 1607
MflI	RGATCY	1 cut(s)	798
MhlI	GDGCHC	2 cut(s)	60, 364
MluCI	AATT	6 cut(s)	296, 1039, 1146, 1216, 1347, 1565
MluI	ACGCGT	1 cut(s)	88
MlyI	GAGTC	1 cut(s)	1505
MmeI	TCCRAC	4 cut(s)	236, 487, 834, 1312
MroXI	GAANNNNTTC	1 cut(s)	169
MseI	TTAA	5 cut(s)	674, 1029, 1043, 1077, 1379
MspCI	CTTAAG	1 cut(s)	1076
MspI	CCGG	3 cut(s)	25, 97, 252
MspR9I	CCNGG	5 cut(s)	26, 97, 98, 1501, 1515
Mva1269I	GAATGC	1 cut(s)	904
MvaI	CCWGG	2 cut(s)	1501, 1515
MvnI	CGCG	2 cut(s)	90, 106
MwoI	GCNNNNNNNGC	7 cut(s)	30, 49, 101, 125, 134, 359, 1695
NciI	CCSGG	3 cut(s)	26, 97, 98
NdeI	CATATG	2 cut(s)	1201, 1633
NdeII	GATC	8 cut(s)	192, 403, 480, 658, 716, 798, 1603, 1607
NheI	GCTAGC	1 cut(s)	133
NlaIII	CATG	7 cut(s)	410, 466, 853, 869, 1022, 1168, 1600
NlaIV	GGNNCC	2 cut(s)	11, 342
NmeAIII	GCCGAG	1 cut(s)	38
NmuCI	GTSAC	2 cut(s)	559, 1503
NspI	RCATGY	1 cut(s)	853
NspV	TTCGAA	1 cut(s)	569
PaeR7I	CTCGAG	1 cut(s)	138
PagI	TCATGA	2 cut(s)	406, 1596
PaqCI	CACCTGC	1 cut(s)	1048
PciI	ACATGT	1 cut(s)	849
PctI	GAATGC	1 cut(s)	904
PdmI	GAANNNNTTC	1 cut(s)	169
PfeI	GAWTC	6 cut(s)	239, 287, 485, 536, 862, 1593
PfoI	TCCNGGA	1 cut(s)	1513
PinAI	ACCGGT	1 cut(s)	251
PkrI	GCNGC	5 cut(s)	45, 68, 71, 118, 152
PleI	GAGTC	1 cut(s)	1504
PpsI	GAGTC	1 cut(s)	1504
PscI	ACATGT	1 cut(s)	849
Psp6I	CCWGG	2 cut(s)	1499, 1513
PspGI	CCWGG	2 cut(s)	1499, 1513
PspN4I	GGNNCC	2 cut(s)	11, 342
PspPI	GGNCC	4 cut(s)	10, 417, 721, 1360
PspXI	VCTCGAGB	1 cut(s)	138
PstI	CTGCAG	2 cut(s)	71, 121
PsuI	RGATCY	1 cut(s)	798
RsaI	GTAC	2 cut(s)	184, 597
RsaNI	GTAC	2 cut(s)	183, 596
Rsr2I	CGGWCCG	1 cut(s)	721
RsrII	CGGWCCG	1 cut(s)	721
SaqAI	TTAA	5 cut(s)	674, 1029, 1043, 1077, 1379
SatI	GCNGC	5 cut(s)	44, 67, 70, 117, 151
Sau3AI	GATC	8 cut(s)	192, 403, 480, 658, 716, 798, 1603, 1607
Sau96I	GGNCC	4 cut(s)	10, 417, 721, 1360
SchI	GAGTC	1 cut(s)	1505
ScrFI	CCNGG	5 cut(s)	26, 97, 98, 1501, 1515
SduI	GDGCHC	2 cut(s)	60, 364
SfaNI	GCATC	5 cut(s)	256, 340, 392, 457, 799
SfcI	CTRYAG	2 cut(s)	67, 117
Sfr274I	CTCGAG	1 cut(s)	138
SfuI	TTCGAA	1 cut(s)	569
SinI	GGWCC	3 cut(s)	417, 721, 1360
SlaI	CTCGAG	1 cut(s)	138
SmaI	CCCGGG	1 cut(s)	98
SmlI	CTYRAG	2 cut(s)	138, 1076
SmoI	CTYRAG	2 cut(s)	138, 1076
Sse9I	AATT	6 cut(s)	296, 1039, 1146, 1216, 1347, 1565
SsiI	CCGC	3 cut(s)	153, 835, 1560
SspI	AATATT	1 cut(s)	1521
SspMI	CTAG	7 cut(s)	134, 144, 471, 903, 1034, 1239, 1305
StyD4I	CCNGG	5 cut(s)	24, 95, 96, 1499, 1513
TaaI	ACNGT	2 cut(s)	793, 1389
TaiI	ACGT	1 cut(s)	361
TaqI	TCGA	6 cut(s)	139, 483, 569, 703, 1090, 1606
TaqII	GACCGA	1 cut(s)	738
TasI	AATT	6 cut(s)	296, 1039, 1146, 1216, 1347, 1565
TatI	WGTACW	2 cut(s)	182, 595
TfiI	GAWTC	6 cut(s)	239, 287, 485, 536, 862, 1593
Tru1I	TTAA	5 cut(s)	674, 1029, 1043, 1077, 1379
Tru9I	TTAA	5 cut(s)	674, 1029, 1043, 1077, 1379
TscAI	CASTG	2 cut(s)	383, 568
TseFI	GTSAC	2 cut(s)	559, 1503
TseI	GCWGC	5 cut(s)	43, 66, 69, 116, 150
Tsp45I	GTSAC	2 cut(s)	559, 1503
TspMI	CCCGGG	1 cut(s)	96
TspRI	CASTG	2 cut(s)	383, 568
Vha464I	CTTAAG	1 cut(s)	1076
VpaK11BI	GGWCC	3 cut(s)	417, 721, 1360
XapI	RAATTY	1 cut(s)	1039
XceI	RCATGY	1 cut(s)	853
XcmI	CCANNNNNNNNNTGG	2 cut(s)	439, 460
XhoI	CTCGAG	1 cut(s)	138
XmaI	CCCGGG	1 cut(s)	96
XmnI	GAANNNNTTC	1 cut(s)	169
XspI	CTAG	7 cut(s)	134, 144, 471, 903, 1034, 1239, 1305

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.