Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003642.1

Orthogroup ID

OG0006889

Physical Location & Seq

Genomic Coordinates Reverse (-)

21662 .. 29718

Gene Structure 8057 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003642.1_g000006.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2853 bp

atgaaggtcaaagagtcggtaacacaatcatttagctactaccctggagatgatggaagtgtggtggattacggtgaggatggaaatcctcattttcaggtcactagagtgtacagggaaaaagagcatgctgagattgaatttactatagggcctataccagttgatgatggaataggcaaagagattgtaactaagattacaaccagcatgagaaccaacaaacaattctacacagattctaacgggcgcgattttattcaaagaattcgagactacagaaaagactgggacctggaagtaaaccaacctgtcgcaggaaactattatccgattaatctgggaatctatacaaaagataacaacacagagctgtcagtattagtggatagatctgtagggggatccagcattgtggacgggcaattggaactgatgcttcataggagattgcttgcagatgatgacaaaggtattgcagaacaactagatgaaatggtgtgcattgaacatgattgcaaaggactaacaattacaggaaagtaccacctgagaattgatcctttaggagagggtgctaagtggcgtcgatcatttggtcaggagatatattctccacttctattagccttcacagaacaaaatggagatgactggacaaactctcatgtcacaaccttttcgggaatggatccttcctacactttacctgataatgttgcaattataactctccaggagctggaagatgggaaagttctctttcgcctggcgcatttatacgagataaagcatataacagaaatgagcttatctgctaaccaagaaagaagggaaatggaaaggaagagactggtttggaatgtgcaaggctcttctgaggaaggacggaaaggcttgaggggaggacctgttgatccaacaaagctagtggtaacgtcgaatttagatagaaataacggaccaaggtccaaagccaaaacaaagaaactgcagaggtcactgcgaaaccgccgccggagcaatctcaggatatttgagatggggaaagagaaccagaaccagacgacgtcggctatggagatcgacaatcaaaaggcgaacacctccgatcagatcggtcctaaattctcaatcaacgttttacagctgttgaaatctgctcagatgcagcatggactgcgccatggggattacactcgttatcggaggtattgcactgcaaggttgaggaggctgtataagtcattgaagttcacacacggccgtggcaagtacaaccgccgagcaataaccgaatcaactgttactgaagtgaggtttctccatgtggttctatatacggcagagagggcttggagccatgccatggaaaaaaggcaagttctggatggtccaaatgctcgtcaacgaatctatctgattggtaggctgaggaaggcagtaaaatgggctactctttttgcacagttgtctgcattcaagggagattctagaacttccttagaagctgaggcttatgcctcttttatgaaagggaacctgttgtttgaacaagatcgaaattgggacacagcattactgaacttcaaaagtgccagggcggtttatgaggagcttgcgaaatatggagacctggagaatcaagttttatgccgtgagcgtgttgaggaattagaacctagtatccggtactgtctacacaagattggagagtcaaatctacaaggctctgaacttctacatattggcgagatggaaggacctgctttggacctcttcaaggctaaattggaggctgttatggatgaggcaagatctcaacaggctgcctccatgacagaatttcattggctaggccatagatttccaatttcgaatgcaaaaactcgggtttctattttaaaagctcaagacttggagaaagatgtacttggttcatcagctaattcactccctacagagaaaaggctagccatttttgacaaaattttcactgcataccatgaggcaaggagctgcattcgcagtgatttggtcagtgcaggtagttctgaaaatgttaaagatgacttgaatggccttgataaagctgttagtgctgtattaggacaacggaccattgagcgtaacctacttttggttagcattgcaaagagcaaactcactaagcgacgagatgacaaaaatgagagaactacgaagccagaagagcttgtccgcttgtatgatctcctattacagaatacagctgacctttcagatttagtcagttcgggacgagaaaaaacatcagaggaagtcacatttgctgcagaatgtgagcttaaaagtttggctttccgagcagaaaggtgtttctttttgggtagatcatacagtttggctggtaagagggtggaagcatattcattgtattgccgtgctcgcacacttgctgaggatgccctgcaaaaatttaaagctgttgataatgctgatcaggtggtgatcaaagagttgaagctattgtgcgatgaatgcagatctaacagttgtatagagcatgcaacaggaatcatggaggagctgaaggctcctgaaaatctctcacaacagatttctaacatccatatatctggagttgacacgaaggagaaattcctccttgagaaacttgaggtctacgaatctgcagttggcgattcaaatgtgagaagtgctgcgcgaattgaagctttccctcctccctgccaaacaattcctcgcaatccaattgttctagaccttgcctatgatcatattgagttcccatctcttctaaataggatgaagaaagaaacaaagggcttcattagtaggttttggagatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03060 map03060

Pfam Domains

Protein Families

SRP68

Protein Analysis

950

Amino Acids

108.27

Weight (kDa)

8.42

Isoelectric Point (pI)

40.11

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006889)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G61970
fragaria_vesca	FvH4_5g09400 FvH4_5g09400 FvH4_5g09400 FvH4_5g09400 FvH4_5g09400
malus_domestica	MD06G1131700.v1.1 MD06G1146600.v1.1 MD14G1148000.v1.1
prunus_persica	Prupe.5G142700_v2.0.a1 Prupe.5G142700_v2.0.a1 Prupe.5G142700_v2.0.a1 Prupe.5G142700_v2.0.a1
pyrus_communis	pycom06g12330
rosa_chinensis	RchiOBHm_Chr7g0188791
rosa_laevigata	RLG00000004660
rosa_multiflora	Rmu_sc0003642.1_g000006
rosa_roxburghii	Rroxscaffold_3G00266030
rosa_rugosa	Rorug06G0493900 Rorug06G0494000 Rorug06G0494100
rosa_samantha	Rh7AG098500 Rh7BG100300 Rh7CG101800 Rh7DG100300
rosa_wichuraiana	Rw7G008500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	728
AatII	GACGTC	1 cut(s)	1073
Acc36I	ACCTGC	2 cut(s)	1774, 2036
AccB7I	CCANNNNNTGG	2 cut(s)	742, 1369
AccI	GTMKAC	2 cut(s)	1699, 2664
AccII	CGCG	2 cut(s)	252, 2707
AciI	CCGC	5 cut(s)	1012, 1015, 1282, 1604, 2221
AclI	AACGTT	1 cut(s)	1140
AclWI	GGATC	6 cut(s)	399, 412, 554, 686, 699, 911
AcoI	YGGCCR	1 cut(s)	1264
AcsI	RAATTY	8 cut(s)	140, 267, 943, 1127, 1844, 1989, 2456, 2639
AcuI	CTGAAG	2 cut(s)	1332, 2591
AcyI	GRCGYC	2 cut(s)	586, 1070
AfaI	GTAC	5 cut(s)	113, 545, 1277, 1694, 1932
AfiI	CCNNNNNNNGG	5 cut(s)	317, 742, 1369, 1783, 2140
AjnI	CCWGG	6 cut(s)	43, 294, 735, 768, 1598, 1635
AjuI	GAANNNNNNNTTGG	4 cut(s)	212, 244, 2661, 2693
AleI	CACNNNNGTG	2 cut(s)	107, 1266
AloI	GAACNNNNNNTCC	2 cut(s)	1671, 1703
Alw21I	GWGCWC	1 cut(s)	2428
Alw26I	GTCTC	3 cut(s)	267, 844, 1626
AlwI	GGATC	6 cut(s)	399, 412, 554, 686, 699, 911
AlwNI	CAGNNNCTG	1 cut(s)	742
Ama87I	CYCGRG	1 cut(s)	1890
AoxI	GGCC	4 cut(s)	152, 1264, 1858, 2080
ApeKI	GCWGC	5 cut(s)	1171, 1829, 2019, 2312, 2702
ApoI	RAATTY	8 cut(s)	140, 267, 943, 1127, 1844, 1989, 2456, 2639
AseI	ATTAAT	1 cut(s)	336
AspLEI	GCGC	4 cut(s)	252, 775, 1185, 2707
AsuHPI	GGTGA	2 cut(s)	86, 2500
AsuII	TTCGAA	1 cut(s)	1877
AsuNHI	GCTAGC	1 cut(s)	1972
AvaI	CYCGRG	1 cut(s)	1890
AvaII	GGWCC	9 cut(s)	292, 908, 962, 969, 1121, 1394, 1763, 1774, 2118
BamHI	GGATCC	2 cut(s)	404, 691
Bbv12I	GWGCWC	1 cut(s)	2428
BbvCI	CCTCAGC	3 cut(s)	1433, 1512, 2439
BbvI	GCAGC	5 cut(s)	1183, 1816, 2006, 2299, 2689
BccI	CCATC	8 cut(s)	47, 74, 164, 743, 1036, 1385, 1750, 2800
BceAI	ACGGC	5 cut(s)	1251, 1279, 1359, 1641, 2406
BciT130I	CCWGG	6 cut(s)	45, 296, 737, 770, 1600, 1637
BciVI	GTATCC	1 cut(s)	1697
BclI	TGATCA	3 cut(s)	2479, 2490, 2776
BcoDI	GTCTC	3 cut(s)	267, 844, 1626
BfaI	CTAG	8 cut(s)	105, 488, 929, 1494, 1683, 1856, 1973, 2762
BfmI	CTRYAG	7 cut(s)	147, 277, 396, 992, 1959, 2313, 2673
BfuAI	ACCTGC	2 cut(s)	1774, 2036
BfuI	GTATCC	1 cut(s)	1697
BglII	AGATCT	3 cut(s)	392, 1817, 2525
BisI	GCNGC	6 cut(s)	1015, 1172, 1830, 2020, 2313, 2703
BlsI	GCNGC	6 cut(s)	1016, 1173, 1831, 2021, 2314, 2704
Bme1390I	CCNGG	6 cut(s)	45, 296, 737, 770, 1600, 1637
Bme18I	GGWCC	9 cut(s)	292, 908, 962, 969, 1121, 1394, 1763, 1774, 2118
BmeT110I	CYCGRG	1 cut(s)	1890
BmiI	GGNNCC	6 cut(s)	293, 406, 693, 1361, 1541, 2577
BmrFI	CCNGG	6 cut(s)	45, 296, 737, 770, 1600, 1637
BmrI	ACTGGG	1 cut(s)	298
BmsI	GCATC	3 cut(s)	426, 1158, 2434
BmtI	GCTAGC	1 cut(s)	1976
BmuI	ACTGGG	1 cut(s)	298
BoxI	GACNNNNGTC	1 cut(s)	967
BpmI	CTGGAG	4 cut(s)	66, 719, 1658, 2640
Bpu10I	CCTNAGC	3 cut(s)	1433, 1512, 2439
Bpu14I	TTCGAA	1 cut(s)	1877
BpuEI	CTTGAG	4 cut(s)	919, 1896, 2669, 2678
BsaBI	GATNNNNATC	1 cut(s)	84
BsaHI	GRCGYC	2 cut(s)	586, 1070
BsaI	GGTCTC	1 cut(s)	1626
BsaJI	CCNNGG	6 cut(s)	43, 965, 1186, 1267, 1368, 1599
BsaWI	WCCGGW	1 cut(s)	1689
BsaXI	ACNNNNNCTCC	2 cut(s)	897, 927
Bsc4I	CCNNNNNNNGG	5 cut(s)	317, 742, 1369, 1783, 2140
Bse1I	ACTGG	4 cut(s)	161, 293, 659, 858
Bse3DI	GCAATG	1 cut(s)	2148
Bse8I	GATNNNNATC	1 cut(s)	84
BseBI	CCWGG	6 cut(s)	45, 296, 737, 770, 1600, 1637
BseDI	CCNNGG	6 cut(s)	43, 965, 1186, 1267, 1368, 1599
BseGI	GGATG	6 cut(s)	85, 1396, 1813, 2449, 2607, 2814
BseJI	GATNNNNATC	1 cut(s)	84
BseLI	CCNNNNNNNGG	5 cut(s)	317, 742, 1369, 1783, 2140
BseMI	GCAATG	1 cut(s)	2148
BseMII	CTCAG	8 cut(s)	123, 542, 870, 1042, 1178, 1424, 1503, 2430
BseNI	ACTGG	4 cut(s)	161, 293, 659, 858
BseRI	GAGGAG	4 cut(s)	1246, 1628, 2579, 2715
BseX3I	CGGCCG	1 cut(s)	1264
BseXI	GCAGC	5 cut(s)	1183, 1816, 2006, 2299, 2689
BsgI	GTGCAG	1 cut(s)	2064
Bsh1236I	CGCG	2 cut(s)	252, 2707
Bsh1285I	CGRYCG	1 cut(s)	1267
BshFI	GGCC	4 cut(s)	154, 1266, 1860, 2082
BsiEI	CGRYCG	1 cut(s)	1267
BsiHKAI	GWGCWC	1 cut(s)	2428
BsiHKCI	CYCGRG	1 cut(s)	1890
BsiSI	CCGG	2 cut(s)	1018, 1690
BslFI	GGGAC	3 cut(s)	305, 1583, 2292
BslI	CCNNNNNNNGG	5 cut(s)	317, 742, 1369, 1783, 2140
BsmAI	GTCTC	3 cut(s)	267, 844, 1626
BsmFI	GGGAC	3 cut(s)	305, 1583, 2292
BsmI	GAATGC	4 cut(s)	1478, 1885, 2022, 2525
BsnI	GGCC	4 cut(s)	154, 1266, 1860, 2082
Bso31I	GGTCTC	1 cut(s)	1626
BsoBI	CYCGRG	1 cut(s)	1890
Bsp119I	TTCGAA	1 cut(s)	1877
Bsp1286I	GDGCHC	1 cut(s)	2428
Bsp1407I	TGTACA	1 cut(s)	111
Bsp19I	CCATGG	2 cut(s)	1186, 1368
BspACI	CCGC	5 cut(s)	1012, 1015, 1282, 1604, 2221
BspANI	GGCC	4 cut(s)	154, 1266, 1860, 2082
BspCNI	CTCAG	8 cut(s)	124, 543, 871, 1041, 1177, 1425, 1504, 2431
BspFNI	CGCG	2 cut(s)	252, 2707
BspLI	GGNNCC	6 cut(s)	293, 406, 693, 1361, 1541, 2577
BspMAI	CTGCAG	3 cut(s)	996, 2317, 2677
BspMI	ACCTGC	2 cut(s)	1774, 2036
BspOI	GCTAGC	1 cut(s)	1976
BspPI	GGATC	6 cut(s)	399, 412, 554, 686, 699, 911
BspQI	GCTCTTC	2 cut(s)	880, 2205
BspT104I	TTCGAA	1 cut(s)	1877
BspTNI	GGTCTC	1 cut(s)	1626
BsrDI	GCAATG	1 cut(s)	2148
BsrGI	TGTACA	1 cut(s)	111
BsrI	ACTGG	4 cut(s)	161, 293, 659, 858
BssECI	CCNNGG	6 cut(s)	43, 965, 1186, 1267, 1368, 1599
BssNI	GRCGYC	2 cut(s)	586, 1070
BssT1I	CCWWGG	3 cut(s)	965, 1186, 1368
Bst2UI	CCWGG	6 cut(s)	45, 296, 737, 770, 1600, 1637
Bst4CI	ACNGT	6 cut(s)	74, 1306, 1470, 1697, 2381, 2534
Bst6I	CTCTTC	5 cut(s)	842, 880, 1784, 2205, 2802
BstACI	GRCGYC	2 cut(s)	586, 1070
BstAPI	GCANNNNNTGC	1 cut(s)	1180
BstAUI	TGTACA	1 cut(s)	111
BstBI	TTCGAA	1 cut(s)	1877
BstC8I	GCNNGC	6 cut(s)	129, 456, 1620, 1974, 2428, 2547
BstDSI	CCRYGG	3 cut(s)	1186, 1267, 1368
BstENI	CCTNNNNNAGG	2 cut(s)	315, 1781
BstF5I	GGATG	6 cut(s)	85, 1396, 1813, 2449, 2607, 2814
BstFNI	CGCG	2 cut(s)	252, 2707
BstHHI	GCGC	4 cut(s)	252, 775, 1185, 2707
BstMAI	GTCTC	3 cut(s)	267, 844, 1626
BstMCI	CGRYCG	1 cut(s)	1267
BstNI	CCWGG	6 cut(s)	45, 296, 737, 770, 1600, 1637
BstNSI	RCATGY	2 cut(s)	131, 2549
BstPAI	GACNNNNGTC	1 cut(s)	967
BstSCI	CCNGG	6 cut(s)	43, 294, 735, 768, 1598, 1635
BstSFI	CTRYAG	7 cut(s)	147, 277, 396, 992, 1959, 2313, 2673
BstUI	CGCG	2 cut(s)	252, 2707
BstV1I	GCAGC	5 cut(s)	1183, 1816, 2006, 2299, 2689
BstX2I	RGATCY	5 cut(s)	392, 404, 691, 1817, 2525
BstXI	CCANNNNNNTGG	2 cut(s)	415, 2618
BstYI	RGATCY	5 cut(s)	392, 404, 691, 1817, 2525
BstZI	CGGCCG	1 cut(s)	1264
BsuI	GTATCC	1 cut(s)	1697
BsuRI	GGCC	4 cut(s)	154, 1266, 1860, 2082
BtgI	CCRYGG	3 cut(s)	1186, 1267, 1368
BtgZI	GCGATG	1 cut(s)	2529
BtsCI	GGATG	6 cut(s)	85, 1396, 1813, 2449, 2607, 2814
BtsI	GCAGTG	4 cut(s)	1001, 1218, 1995, 2035
BtsIMutI	CAGTG	5 cut(s)	1001, 1218, 1995, 2035, 2047
BveI	ACCTGC	2 cut(s)	1774, 2036
Cac8I	GCNNGC	6 cut(s)	129, 456, 1620, 1974, 2428, 2547
CaiI	CAGNNNCTG	1 cut(s)	742
CfoI	GCGC	4 cut(s)	252, 775, 1185, 2707
CseI	GACGC	1 cut(s)	575
Csp6I	GTAC	5 cut(s)	112, 544, 1276, 1693, 1931
CspCI	CAANNNNNGTGG	2 cut(s)	912, 947
CviQI	GTAC	5 cut(s)	112, 544, 1276, 1693, 1931
DraI	TTTAAA	2 cut(s)	1905, 2461
EaeI	YGGCCR	1 cut(s)	1264
EagI	CGGCCG	1 cut(s)	1264
Eam1104I	CTCTTC	5 cut(s)	842, 880, 1784, 2205, 2802
EarI	CTCTTC	5 cut(s)	842, 880, 1784, 2205, 2802
EclXI	CGGCCG	1 cut(s)	1264
Eco130I	CCWWGG	3 cut(s)	965, 1186, 1368
Eco31I	GGTCTC	1 cut(s)	1626
Eco47I	GGWCC	9 cut(s)	292, 908, 962, 969, 1121, 1394, 1763, 1774, 2118
Eco52I	CGGCCG	1 cut(s)	1264
Eco57I	CTGAAG	2 cut(s)	1332, 2591
Eco88I	CYCGRG	1 cut(s)	1890
EcoNI	CCTNNNNNAGG	2 cut(s)	315, 1781
EcoO109I	RGGNCCY	4 cut(s)	152, 292, 908, 1763
EcoRI	GAATTC	1 cut(s)	267
EcoRII	CCWGG	6 cut(s)	43, 294, 735, 768, 1598, 1635
EcoT14I	CCWWGG	3 cut(s)	965, 1186, 1368
ErhI	CCWWGG	3 cut(s)	965, 1186, 1368
FalI	AAGNNNNNCTT	4 cut(s)	1917, 1949, 2323, 2355
FaqI	GGGAC	3 cut(s)	305, 1583, 2292
FbaI	TGATCA	3 cut(s)	2479, 2490, 2776
FblI	GTMKAC	2 cut(s)	1699, 2664
Fnu4HI	GCNGC	6 cut(s)	1015, 1172, 1830, 2020, 2313, 2703
FokI	GGATG	6 cut(s)	92, 1403, 1820, 2456, 2594, 2821
Fsp4HI	GCNGC	6 cut(s)	1015, 1172, 1830, 2020, 2313, 2703
FspBI	CTAG	8 cut(s)	105, 488, 929, 1494, 1683, 1856, 1973, 2762
GlaI	GCGC	4 cut(s)	251, 774, 1184, 2706
GluI	GCNGC	6 cut(s)	1015, 1172, 1830, 2020, 2313, 2703
GsuI	CTGGAG	4 cut(s)	66, 719, 1658, 2640
HaeIII	GGCC	4 cut(s)	154, 1266, 1860, 2082
HapII	CCGG	2 cut(s)	1018, 1690
HgaI	GACGC	1 cut(s)	575
HhaI	GCGC	4 cut(s)	252, 775, 1185, 2707
Hin1I	GRCGYC	2 cut(s)	586, 1070
Hin6I	GCGC	4 cut(s)	250, 773, 1183, 2705
HinP1I	GCGC	4 cut(s)	250, 773, 1183, 2705
HincII	GTYRAC	2 cut(s)	1409, 2626
HindII	GTYRAC	2 cut(s)	1409, 2626
HindIII	AAGCTT	1 cut(s)	2715
HpaII	CCGG	2 cut(s)	1018, 1690
HphI	GGTGA	2 cut(s)	86, 2500
Hpy166II	GTNNAC	8 cut(s)	112, 304, 418, 1257, 1409, 1700, 2626, 2665
Hpy8I	GTNNAC	8 cut(s)	112, 304, 418, 1257, 1409, 1700, 2626, 2665
Hpy99I	CGWCG	5 cut(s)	591, 943, 1072, 1075, 2178
HpyAV	CCTTC	8 cut(s)	640, 705, 825, 878, 1432, 1754, 2566, 2626
HpyCH4III	ACNGT	6 cut(s)	74, 1306, 1470, 1697, 2381, 2534
HpyCH4IV	ACGT	3 cut(s)	938, 1070, 1140
HpySE526I	ACGT	3 cut(s)	938, 1070, 1140
Hsp92I	GRCGYC	2 cut(s)	586, 1070
HspAI	GCGC	4 cut(s)	250, 773, 1183, 2705
Ksp22I	TGATCA	3 cut(s)	2479, 2490, 2776
LguI	GCTCTTC	2 cut(s)	880, 2205
LmnI	GCTCC	7 cut(s)	739, 1020, 1359, 1615, 2016, 2566, 2581
Lsp1109I	GCAGC	5 cut(s)	1183, 1816, 2006, 2299, 2689
LweI	GCATC	3 cut(s)	426, 1158, 2434
MaeI	CTAG	8 cut(s)	105, 488, 929, 1494, 1683, 1856, 1973, 2762
MaeII	ACGT	3 cut(s)	938, 1070, 1140
MaeIII	GTNAC	9 cut(s)	19, 100, 190, 670, 934, 999, 1306, 2129, 2302
MboII	GAAGA	7 cut(s)	758, 859, 867, 1771, 2222, 2789, 2824
MfeI	CAATTG	2 cut(s)	425, 2754
MflI	RGATCY	5 cut(s)	392, 404, 691, 1817, 2525
MhlI	GDGCHC	1 cut(s)	2428
MlyI	GAGTC	2 cut(s)	23, 1724
MmeI	TCCRAC	1 cut(s)	944
MseI	TTAA	5 cut(s)	336, 1904, 2064, 2328, 2460
MslI	CAYNNNNRTG	2 cut(s)	107, 1266
MspA1I	CMGCKG	2 cut(s)	1150, 2252
MspI	CCGG	2 cut(s)	1018, 1690
MspR9I	CCNGG	6 cut(s)	45, 296, 737, 770, 1600, 1637
MunI	CAATTG	2 cut(s)	425, 2754
Mva1269I	GAATGC	4 cut(s)	1478, 1885, 2022, 2525
MvaI	CCWGG	6 cut(s)	45, 296, 737, 770, 1600, 1637
MvnI	CGCG	2 cut(s)	252, 2707
NcoI	CCATGG	2 cut(s)	1186, 1368
NheI	GCTAGC	1 cut(s)	1972
NlaIV	GGNNCC	6 cut(s)	293, 406, 693, 1361, 1541, 2577
NmeAIII	GCCGAG	1 cut(s)	1310
NmuCI	GTSAC	4 cut(s)	100, 670, 999, 2302
NspI	RCATGY	2 cut(s)	131, 2549
NspV	TTCGAA	1 cut(s)	1877
OliI	CACNNNNGTG	2 cut(s)	107, 1266
PaeI	GCATGC	2 cut(s)	131, 2549
PciSI	GCTCTTC	2 cut(s)	880, 2205
PctI	GAATGC	4 cut(s)	1478, 1885, 2022, 2525
PfeI	GAWTC	9 cut(s)	239, 345, 1298, 1413, 1490, 1642, 2556, 2669, 2684
PflFI	GACNNNGTC	1 cut(s)	1069
PflMI	CCANNNNNTGG	2 cut(s)	742, 1369
PfoI	TCCNGGA	1 cut(s)	735
PkrI	GCNGC	6 cut(s)	1016, 1173, 1831, 2021, 2314, 2704
PleI	GAGTC	2 cut(s)	22, 1723
PpsI	GAGTC	2 cut(s)	22, 1723
PpuMI	RGGWCCY	3 cut(s)	292, 908, 1763
PshAI	GACNNNNGTC	1 cut(s)	967
PshBI	ATTAAT	1 cut(s)	336
PsiI	TTATAA	1 cut(s)	728
Psp1406I	AACGTT	1 cut(s)	1140
Psp5II	RGGWCCY	3 cut(s)	292, 908, 1763
Psp6I	CCWGG	6 cut(s)	43, 294, 735, 768, 1598, 1635
PspGI	CCWGG	6 cut(s)	43, 294, 735, 768, 1598, 1635
PspN4I	GGNNCC	6 cut(s)	293, 406, 693, 1361, 1541, 2577
PspPPI	RGGWCCY	3 cut(s)	292, 908, 1763
PstI	CTGCAG	3 cut(s)	996, 2317, 2677
PstNI	CAGNNNCTG	1 cut(s)	742
PsuI	RGATCY	5 cut(s)	392, 404, 691, 1817, 2525
PsyI	GACNNNGTC	1 cut(s)	1069
PvuII	CAGCTG	2 cut(s)	1150, 2252
RsaI	GTAC	5 cut(s)	113, 545, 1277, 1694, 1932
RsaNI	GTAC	5 cut(s)	112, 544, 1276, 1693, 1931
RseI	CAYNNNNRTG	2 cut(s)	107, 1266
SapI	GCTCTTC	2 cut(s)	880, 2205
SaqAI	TTAA	5 cut(s)	336, 1904, 2064, 2328, 2460
SatI	GCNGC	6 cut(s)	1015, 1172, 1830, 2020, 2313, 2703
SchI	GAGTC	2 cut(s)	23, 1724
ScrFI	CCNGG	6 cut(s)	45, 296, 737, 770, 1600, 1637
SduI	GDGCHC	1 cut(s)	2428
SfaNI	GCATC	3 cut(s)	426, 1158, 2434
SfcI	CTRYAG	7 cut(s)	147, 277, 396, 992, 1959, 2313, 2673
SfuI	TTCGAA	1 cut(s)	1877
SinI	GGWCC	9 cut(s)	292, 908, 962, 969, 1121, 1394, 1763, 1774, 2118
SmiMI	CAYNNNNRTG	2 cut(s)	107, 1266
SmlI	CTYRAG	4 cut(s)	898, 1911, 2648, 2657
SmoI	CTYRAG	4 cut(s)	898, 1911, 2648, 2657
SphI	GCATGC	2 cut(s)	131, 2549
SsiI	CCGC	5 cut(s)	1012, 1015, 1282, 1604, 2221
SspMI	CTAG	8 cut(s)	105, 488, 929, 1494, 1683, 1856, 1973, 2762
StyD4I	CCNGG	6 cut(s)	43, 294, 735, 768, 1598, 1635
StyI	CCWWGG	3 cut(s)	965, 1186, 1368
TaaI	ACNGT	6 cut(s)	74, 1306, 1470, 1697, 2381, 2534
TaiI	ACGT	3 cut(s)	941, 1073, 1143
TaqI	TCGA	6 cut(s)	271, 589, 941, 1086, 1561, 1877
TaqII	GACCGA	1 cut(s)	1109
TatI	WGTACW	3 cut(s)	111, 1275, 1930
TauI	GCSGC	1 cut(s)	1017
TfiI	GAWTC	9 cut(s)	239, 345, 1298, 1413, 1490, 1642, 2556, 2669, 2684
Tru1I	TTAA	5 cut(s)	336, 1904, 2064, 2328, 2460
Tru9I	TTAA	5 cut(s)	336, 1904, 2064, 2328, 2460
TscAI	CASTG	5 cut(s)	1008, 1225, 2002, 2035, 2047
TseFI	GTSAC	4 cut(s)	100, 670, 999, 2302
TseI	GCWGC	5 cut(s)	1171, 1829, 2019, 2312, 2702
Tsp45I	GTSAC	4 cut(s)	100, 670, 999, 2302
TspGWI	ACGGA	3 cut(s)	904, 975, 2131
TspRI	CASTG	5 cut(s)	1008, 1225, 2002, 2035, 2047
Tth111I	GACNNNGTC	1 cut(s)	1069
Van91I	CCANNNNNTGG	2 cut(s)	742, 1369
VpaK11BI	GGWCC	9 cut(s)	292, 908, 962, 969, 1121, 1394, 1763, 1774, 2118
VspI	ATTAAT	1 cut(s)	336
XagI	CCTNNNNNAGG	2 cut(s)	315, 1781
XapI	RAATTY	8 cut(s)	140, 267, 943, 1127, 1844, 1989, 2456, 2639
XbaI	TCTAGA	2 cut(s)	1493, 2761
XceI	RCATGY	2 cut(s)	131, 2549
XmiI	GTMKAC	2 cut(s)	1699, 2664
XspI	CTAG	8 cut(s)	105, 488, 929, 1494, 1683, 1856, 1973, 2762
ZraI	GACGTC	1 cut(s)	1071

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.