Rmu_sc0004296.1_g000017

IAA-amino acid hydrolase ILR1-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004296.1
Physical Location & Seq
Reverse (-)
65310 .. 70104
4795 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004296.1_g000017.1.cds

Sequence Viewer

Length: 1455 bp
atgtggaaggcatacacttttctctggattgcccttcaagaaaaggacttagccgaatgcctgaacggtatggctgcttttattggcagtagaaaggtggaaatgattagagatgaaggaattagctctgaatccgaactagtggctgagtttaaagataaatgcacctttggtcagaagggtaaccccagtgtgagagcactccctcacaacacacctatctctaatattcttgaagctgaagcggaagcagctgatgttcttccaaaagtctatccaccgggttatgttcctccaaagggatacgcaatggtttcatatgctactgttgtaagaaattggtctgcaagataccctttggctgaaaccggcgttgttggccttgttgggaccggtggtccgccctttgttgcaatcagagcagacatggatgctttggctatgcaggagagtgtggagtgggagcacaagagtaaaattccagggaagatgcatggatgtggacatgatgctcatgttgccatgcttcttggagctgcaactatacttcaagagtatcgccacaaattacaggggactgttgttcttgttttccaaccagctgaggaaggaggtgcaggagcaaagaaaatgatagatgaaggtgcagtggagcatgtcagtgccatctttgggttacatgtcgctgctgaccaccccattggttcagtggccaccaggcctggccctattttggctgcgagtggattttttgaagccgtaataagtgggaagggaggtcatgctgcaattccacagcacacaatagacccaatattggctgcttccaatgttattgttagtctgcaacatcttgtttcacgtgaagccgaccccttggattcacaggttgtgactgttggaaaattccacggaggtggtgcatttaatgttattccggattctgttacaattggtggtactttcagggcattttcaaaggacagctttatccaacttaaacaaagaatcgaagaggttattactagacaagccagtgttcagaggtgcaatgcaaccgtcttattcaatgaaattgcacagcccttttaccctgcaactgtaaatgacaaagatttgcatgagtacttccggaaagttgcagtcgatttggtgggccctcagaatgtatttgagaagcaaccactgatgggggcggaagacttctcattctatcaagaagtaattccagggtacttcttctttctgggtatgaagaatgacactcaaggacagttcaaaccaatgcattcaccatatttcagagtaaacgaagacgtgcttccttatggagctgcattccatgcatcactggccgccaggtacctcctggaaaagcaaccgaaatctacctcaacagcagaccaaaaaacgaaatccacttccatgaaagggaactttcatgatgaactatga

Protein Analysis

484

Amino Acids

52.68

Weight (kDa)

6.02

Isoelectric Point (pI)

34.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0010736)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1362
AccB1I GGYRCC 1 cut(s) 1362
AccIII TCCGGA 2 cut(s) 937, 1131
AciI CCGC 4 cut(s) 245, 401, 1196, 1356
AcoI YGGCCR 2 cut(s) 711, 1353
AcsI RAATTY 2 cut(s) 477, 905
AcuI CTGAAG 1 cut(s) 261
AcvI CACGTG 1 cut(s) 863
AfaI GTAC 4 cut(s) 961, 1127, 1235, 1364
AfiI CCNNNNNNNGG 6 cut(s) 299, 672, 733, 817, 1190, 1431
AflIII ACRYGT 1 cut(s) 679
AgeI ACCGGT 1 cut(s) 392
AgsI TTSAA 7 cut(s) 38, 236, 551, 755, 978, 1069, 1279
AhdI GACNNNNNGTC 1 cut(s) 396
AhlI ACTAGT 1 cut(s) 139
AjiI CACGTC 1 cut(s) 1318
AjnI CCWGG 6 cut(s) 481, 716, 721, 1228, 1358, 1368
AleI CACNNNNGTG 1 cut(s) 915
AluBI AGCT 7 cut(s) 126, 239, 254, 536, 602, 987, 1334
AluI AGCT 7 cut(s) 126, 239, 254, 536, 602, 987, 1334
Alw21I GWGCWC 2 cut(s) 202, 468
Aor13HI TCCGGA 2 cut(s) 937, 1131
AoxI GGCC 6 cut(s) 379, 711, 719, 724, 1156, 1353
ApaI GGGCCC 1 cut(s) 1160
ApeKI GCWGC 8 cut(s) 74, 251, 536, 686, 737, 785, 821, 1334
ApoI RAATTY 2 cut(s) 477, 905
AsiGI ACCGGT 1 cut(s) 392
Asp700I GAANNNNTTC 1 cut(s) 1224
Asp718I GGTACC 1 cut(s) 1362
AspS9I GGNCC 5 cut(s) 390, 398, 725, 1156, 1157
AsuC2I CCSGG 1 cut(s) 282
AsuHPI GGTGA 1 cut(s) 1284
AvaII GGWCC 2 cut(s) 390, 398
BaeGI GKGCMC 1 cut(s) 1160
BalI TGGCCA 1 cut(s) 713
BanI GGYRCC 1 cut(s) 1362
BanII GRGCYC 1 cut(s) 1160
BbrPI CACGTG 1 cut(s) 863
BbsI GAAGAC 2 cut(s) 1206, 1320
Bbv12I GWGCWC 2 cut(s) 202, 468
BbvCI CCTCAGC 1 cut(s) 603
BbvI GCAGC 8 cut(s) 61, 263, 523, 673, 724, 772, 808, 1321
BccI CCATC 2 cut(s) 674, 1183
BceAI ACGGC 1 cut(s) 743
BciT130I CCWGG 6 cut(s) 483, 718, 723, 1230, 1360, 1370
BciVI GTATCC 1 cut(s) 296
BcnI CCSGG 1 cut(s) 282
BcuI ACTAGT 1 cut(s) 139
BfaI CTAG 2 cut(s) 140, 1026
BfuI GTATCC 1 cut(s) 296
BisI GCNGC 9 cut(s) 75, 252, 537, 687, 738, 786, 822, 1335, 1356
BlsI GCNGC 9 cut(s) 76, 253, 538, 688, 739, 787, 823, 1336, 1357
BmcAI AGTACT 1 cut(s) 1127
Bme1390I CCNGG 7 cut(s) 282, 483, 718, 723, 1230, 1360, 1370
Bme18I GGWCC 2 cut(s) 390, 398
BmeRI GACNNNNNGTC 1 cut(s) 396
BmgBI CACGTC 1 cut(s) 1318
BmgT120I GGNCC 5 cut(s) 390, 398, 725, 1156, 1157
BmiI GGNNCC 3 cut(s) 391, 1158, 1364
BmrFI CCNGG 7 cut(s) 282, 483, 718, 723, 1230, 1360, 1370
BmrI ACTGGG 1 cut(s) 183
BmsI GCATC 4 cut(s) 421, 480, 499, 1355
BmuI ACTGGG 1 cut(s) 183
BpiI GAAGAC 2 cut(s) 1206, 1320
Bpu10I CCTNAGC 1 cut(s) 603
BpuEI CTTGAG 1 cut(s) 1251
BpuMI CCSGG 1 cut(s) 282
BsaAI YACGTR 1 cut(s) 863
BsaJI CCNNGG 4 cut(s) 482, 876, 910, 1229
BsaWI WCCGGW 3 cut(s) 392, 937, 1131
Bsc4I CCNNNNNNNGG 6 cut(s) 299, 672, 733, 817, 1190, 1431
Bse118I RCCGGY 2 cut(s) 368, 392
Bse1I ACTGG 3 cut(s) 189, 1035, 1356
Bse3DI GCAATG 2 cut(s) 315, 1057
BseAI TCCGGA 2 cut(s) 937, 1131
BseBI CCWGG 6 cut(s) 483, 718, 723, 1230, 1360, 1370
BseDI CCNNGG 4 cut(s) 482, 876, 910, 1229
BseGI GGATG 2 cut(s) 436, 503
BseLI CCNNNNNNNGG 6 cut(s) 299, 672, 733, 817, 1190, 1431
BseMI GCAATG 2 cut(s) 315, 1057
BseMII CTCAG 3 cut(s) 138, 594, 1175
BseNI ACTGG 3 cut(s) 189, 1035, 1356
BseSI GKGCMC 1 cut(s) 1160
BseXI GCAGC 8 cut(s) 61, 263, 523, 673, 724, 772, 808, 1321
BsgI GTGCAG 2 cut(s) 636, 666
BshFI GGCC 6 cut(s) 381, 713, 721, 726, 1158, 1355
BshNI GGYRCC 1 cut(s) 1362
BshTI ACCGGT 1 cut(s) 392
BsiHKAI GWGCWC 2 cut(s) 202, 468
BsiSI CCGG 5 cut(s) 281, 369, 393, 938, 1132
BslFI GGGAC 2 cut(s) 403, 589
BslI CCNNNNNNNGG 6 cut(s) 299, 672, 733, 817, 1190, 1431
BsmFI GGGAC 2 cut(s) 403, 589
BsmI GAATGC 3 cut(s) 62, 1288, 1337
BsnI GGCC 6 cut(s) 381, 713, 721, 726, 1158, 1355
Bsp120I GGGCCC 1 cut(s) 1156
Bsp1286I GDGCHC 3 cut(s) 202, 468, 1160
Bsp13I TCCGGA 2 cut(s) 937, 1131
BspACI CCGC 4 cut(s) 245, 401, 1196, 1356
BspANI GGCC 6 cut(s) 381, 713, 721, 726, 1158, 1355
BspCNI CTCAG 3 cut(s) 139, 595, 1174
BspEI TCCGGA 2 cut(s) 937, 1131
BspHI TCATGA 1 cut(s) 1441
BspLI GGNNCC 3 cut(s) 391, 1158, 1364
BspT107I GGYRCC 1 cut(s) 1362
BsrDI GCAATG 2 cut(s) 315, 1057
BsrFI RCCGGY 2 cut(s) 368, 392
BsrI ACTGG 3 cut(s) 189, 1035, 1356
BssAI RCCGGY 2 cut(s) 368, 392
BssECI CCNNGG 4 cut(s) 482, 876, 910, 1229
BssT1I CCWWGG 1 cut(s) 876
Bst2UI CCWGG 6 cut(s) 483, 718, 723, 1230, 1360, 1370
Bst4CI ACNGT 7 cut(s) 68, 328, 580, 898, 1060, 1102, 1275
Bst6I CTCTTC 1 cut(s) 1008
BstAPI GCANNNNNTGC 1 cut(s) 1343
BstBAI YACGTR 1 cut(s) 863
BstDEI CTNAG 4 cut(s) 49, 147, 603, 1161
BstDSI CCRYGG 1 cut(s) 910
BstEII GGTNACC 1 cut(s) 182
BstF5I GGATG 2 cut(s) 436, 503
BstMWI GCNNNNNNNGC 6 cut(s) 251, 378, 419, 518, 1343, 1352
BstNI CCWGG 6 cut(s) 483, 718, 723, 1230, 1360, 1370
BstNSI RCATGY 2 cut(s) 659, 683
BstPI GGTNACC 1 cut(s) 182
BstSCI CCNGG 7 cut(s) 280, 481, 716, 721, 1228, 1358, 1368
BstSLI GKGCMC 1 cut(s) 1160
BstV1I GCAGC 8 cut(s) 61, 263, 523, 673, 724, 772, 808, 1321
BstV2I GAAGAC 2 cut(s) 1206, 1320
BstXI CCANNNNNNTGG 2 cut(s) 701, 917
BsuI GTATCC 1 cut(s) 296
BsuRI GGCC 6 cut(s) 381, 713, 721, 726, 1158, 1355
BtgI CCRYGG 1 cut(s) 910
BtrI CACGTC 1 cut(s) 1318
BtsCI GGATG 2 cut(s) 436, 503
BtsI GCAGTG 1 cut(s) 654
BtsIMutI CAGTG 7 cut(s) 196, 654, 667, 714, 1042, 1184, 1349
CciI TCATGA 1 cut(s) 1441
Cfr10I RCCGGY 2 cut(s) 368, 392
Cfr13I GGNCC 5 cut(s) 390, 398, 725, 1156, 1157
Csp6I GTAC 4 cut(s) 960, 1126, 1234, 1363
CspAI ACCGGT 1 cut(s) 392
CviQI GTAC 4 cut(s) 960, 1126, 1234, 1363
DdeI CTNAG 4 cut(s) 49, 147, 603, 1161
DraI TTTAAA 1 cut(s) 154
DriI GACNNNNNGTC 1 cut(s) 396
EaeI YGGCCR 2 cut(s) 711, 1353
Eam1104I CTCTTC 1 cut(s) 1008
Eam1105I GACNNNNNGTC 1 cut(s) 396
EarI CTCTTC 1 cut(s) 1008
EciI GGCGGA 2 cut(s) 390, 1211
Eco130I CCWWGG 1 cut(s) 876
Eco147I AGGCCT 1 cut(s) 721
Eco24I GRGCYC 1 cut(s) 1160
Eco47I GGWCC 2 cut(s) 390, 398
Eco57I CTGAAG 1 cut(s) 261
Eco72I CACGTG 1 cut(s) 863
Eco91I GGTNACC 1 cut(s) 182
EcoO109I RGGNCCY 1 cut(s) 1157
EcoO65I GGTNACC 1 cut(s) 182
EcoRII CCWGG 6 cut(s) 481, 716, 721, 1228, 1358, 1368
EcoT14I CCWWGG 1 cut(s) 876
EcoT22I ATGCAT 3 cut(s) 495, 1290, 1348
EcoT38I GRGCYC 1 cut(s) 1160
ErhI CCWWGG 1 cut(s) 876
FalI AAGNNNNNCTT 6 cut(s) 340, 372, 971, 1003, 1305, 1337
FaqI GGGAC 2 cut(s) 403, 589
FauNDI CATATG 1 cut(s) 319
Fnu4HI GCNGC 9 cut(s) 75, 252, 537, 687, 738, 786, 822, 1335, 1356
FokI GGATG 2 cut(s) 443, 510
FriOI GRGCYC 1 cut(s) 1160
Fsp4HI GCNGC 9 cut(s) 75, 252, 537, 687, 738, 786, 822, 1335, 1356
FspBI CTAG 2 cut(s) 140, 1026
GluI GCNGC 9 cut(s) 75, 252, 537, 687, 738, 786, 822, 1335, 1356
HaeIII GGCC 6 cut(s) 381, 713, 721, 726, 1158, 1355
HapII CCGG 5 cut(s) 281, 369, 393, 938, 1132
HinfI GANTC 4 cut(s) 131, 881, 941, 1008
HpaII CCGG 5 cut(s) 281, 369, 393, 938, 1132
HphI GGTGA 1 cut(s) 1284
Hpy166II GTNNAC 2 cut(s) 503, 1309
Hpy188I TCNGA 7 cut(s) 130, 136, 177, 419, 1044, 1164, 1304
Hpy188III TCNNGA 8 cut(s) 25, 38, 233, 551, 938, 1132, 1217, 1442
Hpy8I GTNNAC 2 cut(s) 503, 1309
HpyAV CCTTC 6 cut(s) 44, 110, 172, 602, 635, 766
HpyCH4III ACNGT 7 cut(s) 68, 328, 580, 898, 1060, 1102, 1275
HpyCH4IV ACGT 2 cut(s) 862, 1317
HpyF10VI GCNNNNNNNGC 6 cut(s) 251, 378, 419, 518, 1343, 1352
HpyF3I CTNAG 4 cut(s) 49, 147, 603, 1161
HpySE526I ACGT 2 cut(s) 862, 1317
Kpn2I TCCGGA 2 cut(s) 937, 1131
KpnI GGTACC 1 cut(s) 1366
LmnI GCTCC 5 cut(s) 463, 533, 620, 652, 1331
Lsp1109I GCAGC 8 cut(s) 61, 263, 523, 673, 724, 772, 808, 1321
LweI GCATC 4 cut(s) 421, 480, 499, 1355
MaeI CTAG 2 cut(s) 140, 1026
MaeII ACGT 2 cut(s) 862, 1317
MaeIII GTNAC 4 cut(s) 182, 675, 892, 946
MboII GAAGA 7 cut(s) 254, 499, 1025, 1211, 1231, 1267, 1325
MfeI CAATTG 1 cut(s) 951
MhlI GDGCHC 3 cut(s) 202, 468, 1160
MlsI TGGCCA 1 cut(s) 713
MluCI AATT 9 cut(s) 120, 337, 477, 566, 789, 905, 951, 1074, 1224
MluNI TGGCCA 1 cut(s) 713
MmeI TCCRAC 3 cut(s) 619, 880, 1018
Mox20I TGGCCA 1 cut(s) 713
Mph1103I ATGCAT 3 cut(s) 495, 1290, 1348
MroI TCCGGA 2 cut(s) 937, 1131
MroXI GAANNNNTTC 1 cut(s) 1224
MscI TGGCCA 1 cut(s) 713
MseI TTAA 3 cut(s) 153, 927, 999
MslI CAYNNNNRTG 4 cut(s) 498, 660, 915, 1424
Msp20I TGGCCA 1 cut(s) 713
MspA1I CMGCKG 2 cut(s) 254, 602
MspI CCGG 5 cut(s) 281, 369, 393, 938, 1132
MspR9I CCNGG 7 cut(s) 282, 483, 718, 723, 1230, 1360, 1370
MunI CAATTG 1 cut(s) 951
Mva1269I GAATGC 3 cut(s) 62, 1288, 1337
MvaI CCWGG 6 cut(s) 483, 718, 723, 1230, 1360, 1370
MwoI GCNNNNNNNGC 6 cut(s) 251, 378, 419, 518, 1343, 1352
NciI CCSGG 1 cut(s) 282
NdeI CATATG 1 cut(s) 319
NlaIV GGNNCC 3 cut(s) 391, 1158, 1364
NmuCI GTSAC 1 cut(s) 892
NsiI ATGCAT 3 cut(s) 495, 1290, 1348
NspI RCATGY 2 cut(s) 659, 683
OliI CACNNNNGTG 1 cut(s) 915
PagI TCATGA 1 cut(s) 1441
PceI AGGCCT 1 cut(s) 721
PciI ACATGT 1 cut(s) 679
PctI GAATGC 3 cut(s) 62, 1288, 1337
PdmI GAANNNNTTC 1 cut(s) 1224
PfeI GAWTC 4 cut(s) 131, 881, 941, 1008
PfoI TCCNGGA 1 cut(s) 1368
PinAI ACCGGT 1 cut(s) 392
PkrI GCNGC 9 cut(s) 76, 253, 538, 688, 739, 787, 823, 1336, 1357
PmaCI CACGTG 1 cut(s) 863
PmlI CACGTG 1 cut(s) 863
Ppu21I YACGTR 1 cut(s) 863
PscI ACATGT 1 cut(s) 679
Psp6I CCWGG 6 cut(s) 481, 716, 721, 1228, 1358, 1368
PspCI CACGTG 1 cut(s) 863
PspEI GGTNACC 1 cut(s) 182
PspGI CCWGG 6 cut(s) 481, 716, 721, 1228, 1358, 1368
PspN4I GGNNCC 3 cut(s) 391, 1158, 1364
PspOMI GGGCCC 1 cut(s) 1156
PspPI GGNCC 5 cut(s) 390, 398, 725, 1156, 1157
PvuII CAGCTG 2 cut(s) 254, 602
RsaI GTAC 4 cut(s) 961, 1127, 1235, 1364
RsaNI GTAC 4 cut(s) 960, 1126, 1234, 1363
RseI CAYNNNNRTG 4 cut(s) 498, 660, 915, 1424
SaqAI TTAA 3 cut(s) 153, 927, 999
SatI GCNGC 9 cut(s) 75, 252, 537, 687, 738, 786, 822, 1335, 1356
Sau96I GGNCC 5 cut(s) 390, 398, 725, 1156, 1157
ScaI AGTACT 1 cut(s) 1127
ScrFI CCNGG 7 cut(s) 282, 483, 718, 723, 1230, 1360, 1370
SduI GDGCHC 3 cut(s) 202, 468, 1160
SfaNI GCATC 4 cut(s) 421, 480, 499, 1355
SinI GGWCC 2 cut(s) 390, 398
SmiMI CAYNNNNRTG 4 cut(s) 498, 660, 915, 1424
SmlI CTYRAG 1 cut(s) 1266
SmoI CTYRAG 1 cut(s) 1266
SpeI ACTAGT 1 cut(s) 139
Sse9I AATT 9 cut(s) 120, 337, 477, 566, 789, 905, 951, 1074, 1224
SseBI AGGCCT 1 cut(s) 721
SsiI CCGC 4 cut(s) 245, 401, 1196, 1356
SspI AATATT 2 cut(s) 229, 816
SspMI CTAG 2 cut(s) 140, 1026
StuI AGGCCT 1 cut(s) 721
StyD4I CCNGG 7 cut(s) 280, 481, 716, 721, 1228, 1358, 1368
StyI CCWWGG 1 cut(s) 876
TaaI ACNGT 7 cut(s) 68, 328, 580, 898, 1060, 1102, 1275
TaiI ACGT 2 cut(s) 865, 1320
TaqI TCGA 2 cut(s) 1011, 1146
TasI AATT 9 cut(s) 120, 337, 477, 566, 789, 905, 951, 1074, 1224
TatI WGTACW 1 cut(s) 1125
TauI GCSGC 1 cut(s) 1358
TfiI GAWTC 4 cut(s) 131, 881, 941, 1008
Tru1I TTAA 3 cut(s) 153, 927, 999
Tru9I TTAA 3 cut(s) 153, 927, 999
TscAI CASTG 7 cut(s) 196, 654, 667, 714, 1042, 1191, 1356
TseFI GTSAC 1 cut(s) 892
TseI GCWGC 8 cut(s) 74, 251, 536, 686, 737, 785, 821, 1334
Tsp45I GTSAC 1 cut(s) 892
TspDTI ATGAA 7 cut(s) 129, 306, 654, 1086, 1268, 1430, 1442
TspGWI ACGGA 1 cut(s) 927
TspRI CASTG 7 cut(s) 196, 654, 667, 714, 1042, 1191, 1356
VpaK11BI GGWCC 2 cut(s) 390, 398
XapI RAATTY 2 cut(s) 477, 905
XceI RCATGY 2 cut(s) 659, 683
XcmI CCANNNNNNNNNTGG 2 cut(s) 706, 1366
XmnI GAANNNNTTC 1 cut(s) 1224
XspI CTAG 2 cut(s) 140, 1026
ZrmI AGTACT 1 cut(s) 1127
Zsp2I ATGCAT 3 cut(s) 495, 1290, 1348
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.