Rmu_sc0023787.1_g000002

IAA-amino acid hydrolase ILR1-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0023787.1
Physical Location & Seq
Forward (+)
4816 .. 7532
2717 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0023787.1_g000002.1.cds

Sequence Viewer

Length: 1329 bp
atgattacgccactgcccatttcctcaaaccaatcttcgagcccagaagtggagctggctcaaatcccagtcttgtttcttgaacatgctaaaagaaacgagcttttcgatcgtatggtgagtatcagaaggaaaatccatgaaaacccagagctttgttatgaggaatttgaaaccagtaagcttatcagagctgaacttgaccggctgggcatcccttacagataccctttggctgaaaccggcgttgttggccttgttgggaccggtggtccgccctttgttgcaatcagagcagacatggatgctttggctatgcaggagagtgtggagtgggagcacaagagtaaaattccagggaagatgcatggatgtggacatgatgctcatgttgccatgcttcttggagctgcaactatacttcaagagtatcgccacaaattacaggggactgttgttcttgttttccaaccagctgaggaaggaggtgcaggagcaaagaaaatgatagatgaaggtgcagtggagcatgtcagtgccatctttgggttacatgtcgctgctgaccaccccattggttcagtggccaccaggcctggccctattttggctgcgagtggattttttgaagccgtaataagtgggaagggaggtcatgctgcaattccacagcacacaatagacccaatattggctgcttccaatgttattgttagtctgcaacatcttgtttcacgtgaagccgaccccttggattcacaggttgtgactgttggaaaattccacggaggtggtgcatttaatgttattccggattctgttacaattggtggtactttcagggcattttcaaaggacagctttatccaacttaaacaaagaatcgaagaggttattactagacaagccagtgttcagaggtgcaatgcaaccgtcttattcaatgaaattgcacagcccttttaccctgcaactgtaaatgacaaagatttgcatgagtacttccggaaagttgcagtcgatttggtgggccctcagaatgtatttgagaagcaaccactgatgggggcggaagacttctcattctatcaagaagtaattccagggtacttcttctttctgggtatgaagaatgacactcaaggacagttcaaaccaatgcattcaccatatttcagagtaaacgaagacgtgcttccttatggagctgcattccatgcatcactggccgccaggtacctcctggaaaagcaaccgaaatctacctcaacagcagaccaaaaaacgaaatccacttccatgaaagggaactttcatgatgaactatga

Protein Analysis

442

Amino Acids

48.49

Weight (kDa)

5.98

Isoelectric Point (pI)

33.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0010736)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1236
AccB1I GGYRCC 1 cut(s) 1236
AccIII TCCGGA 2 cut(s) 811, 1005
AciI CCGC 3 cut(s) 275, 1070, 1230
AcoI YGGCCR 2 cut(s) 585, 1227
AcsI RAATTY 3 cut(s) 167, 351, 779
AcvI CACGTG 1 cut(s) 737
AfaI GTAC 4 cut(s) 835, 1001, 1109, 1238
AfiI CCNNNNNNNGG 6 cut(s) 49, 546, 607, 691, 1064, 1305
AflIII ACRYGT 1 cut(s) 553
AgeI ACCGGT 1 cut(s) 266
AgsI TTSAA 7 cut(s) 83, 173, 425, 629, 852, 943, 1153
AhdI GACNNNNNGTC 1 cut(s) 270
AjiI CACGTC 1 cut(s) 1192
AjnI CCWGG 6 cut(s) 355, 590, 595, 1102, 1232, 1242
AleI CACNNNNGTG 1 cut(s) 789
AluBI AGCT 9 cut(s) 55, 103, 154, 184, 194, 410, 476, 861, 1208
AluI AGCT 9 cut(s) 55, 103, 154, 184, 194, 410, 476, 861, 1208
Alw21I GWGCWC 1 cut(s) 342
Aor13HI TCCGGA 2 cut(s) 811, 1005
AoxI GGCC 6 cut(s) 253, 585, 593, 598, 1030, 1227
ApaI GGGCCC 1 cut(s) 1034
ApeKI GCWGC 6 cut(s) 410, 560, 611, 659, 695, 1208
ApoI RAATTY 3 cut(s) 167, 351, 779
AsiGI ACCGGT 1 cut(s) 266
Asp700I GAANNNNTTC 1 cut(s) 1098
Asp718I GGTACC 1 cut(s) 1236
AspS9I GGNCC 5 cut(s) 264, 272, 599, 1030, 1031
AsuHPI GGTGA 2 cut(s) 130, 1158
AvaII GGWCC 2 cut(s) 264, 272
BaeGI GKGCMC 1 cut(s) 1034
BalI TGGCCA 1 cut(s) 587
BanI GGYRCC 1 cut(s) 1236
BanII GRGCYC 2 cut(s) 44, 1034
BbrPI CACGTG 1 cut(s) 737
BbsI GAAGAC 2 cut(s) 1080, 1194
Bbv12I GWGCWC 1 cut(s) 342
BbvCI CCTCAGC 1 cut(s) 477
BbvI GCAGC 6 cut(s) 397, 547, 598, 646, 682, 1195
BccI CCATC 2 cut(s) 548, 1057
BceAI ACGGC 1 cut(s) 617
BciT130I CCWGG 6 cut(s) 357, 592, 597, 1104, 1234, 1244
BfaI CTAG 1 cut(s) 900
BisI GCNGC 7 cut(s) 411, 561, 612, 660, 696, 1209, 1230
BlsI GCNGC 7 cut(s) 412, 562, 613, 661, 697, 1210, 1231
BmcAI AGTACT 1 cut(s) 1001
Bme1390I CCNGG 6 cut(s) 357, 592, 597, 1104, 1234, 1244
Bme18I GGWCC 2 cut(s) 264, 272
BmeRI GACNNNNNGTC 1 cut(s) 270
BmgBI CACGTC 1 cut(s) 1192
BmgT120I GGNCC 5 cut(s) 264, 272, 599, 1030, 1031
BmiI GGNNCC 3 cut(s) 265, 1032, 1238
BmrFI CCNGG 6 cut(s) 357, 592, 597, 1104, 1234, 1244
BmrI ACTGGG 1 cut(s) 62
BmsI GCATC 5 cut(s) 222, 295, 354, 373, 1229
BmuI ACTGGG 1 cut(s) 62
BpiI GAAGAC 2 cut(s) 1080, 1194
Bpu10I CCTNAGC 1 cut(s) 477
BpuEI CTTGAG 1 cut(s) 1125
BsaAI YACGTR 1 cut(s) 737
BsaJI CCNNGG 4 cut(s) 356, 750, 784, 1103
BsaWI WCCGGW 3 cut(s) 266, 811, 1005
Bsc4I CCNNNNNNNGG 6 cut(s) 49, 546, 607, 691, 1064, 1305
Bse118I RCCGGY 3 cut(s) 204, 242, 266
Bse1I ACTGG 4 cut(s) 68, 177, 909, 1230
Bse3DI GCAATG 1 cut(s) 931
BseAI TCCGGA 2 cut(s) 811, 1005
BseBI CCWGG 6 cut(s) 357, 592, 597, 1104, 1234, 1244
BseDI CCNNGG 4 cut(s) 356, 750, 784, 1103
BseGI GGATG 3 cut(s) 213, 310, 377
BseLI CCNNNNNNNGG 6 cut(s) 49, 546, 607, 691, 1064, 1305
BseMI GCAATG 1 cut(s) 931
BseMII CTCAG 2 cut(s) 468, 1049
BseNI ACTGG 4 cut(s) 68, 177, 909, 1230
BseSI GKGCMC 1 cut(s) 1034
BseXI GCAGC 6 cut(s) 397, 547, 598, 646, 682, 1195
BseYI CCCAGC 1 cut(s) 208
BsgI GTGCAG 2 cut(s) 510, 540
Bsh1285I CGRYCG 1 cut(s) 112
BshFI GGCC 6 cut(s) 255, 587, 595, 600, 1032, 1229
BshNI GGYRCC 1 cut(s) 1236
BshTI ACCGGT 1 cut(s) 266
BsiEI CGRYCG 1 cut(s) 112
BsiHKAI GWGCWC 1 cut(s) 342
BsiSI CCGG 5 cut(s) 205, 243, 267, 812, 1006
BslFI GGGAC 2 cut(s) 277, 463
BslI CCNNNNNNNGG 6 cut(s) 49, 546, 607, 691, 1064, 1305
BsmFI GGGAC 2 cut(s) 277, 463
BsmI GAATGC 2 cut(s) 1162, 1211
BsnI GGCC 6 cut(s) 255, 587, 595, 600, 1032, 1229
Bsp120I GGGCCC 1 cut(s) 1030
Bsp1286I GDGCHC 3 cut(s) 44, 342, 1034
Bsp13I TCCGGA 2 cut(s) 811, 1005
Bsp143I GATC 1 cut(s) 109
BspACI CCGC 3 cut(s) 275, 1070, 1230
BspANI GGCC 6 cut(s) 255, 587, 595, 600, 1032, 1229
BspCNI CTCAG 2 cut(s) 469, 1048
BspEI TCCGGA 2 cut(s) 811, 1005
BspHI TCATGA 1 cut(s) 1315
BspLI GGNNCC 3 cut(s) 265, 1032, 1238
BspT107I GGYRCC 1 cut(s) 1236
BsrDI GCAATG 1 cut(s) 931
BsrFI RCCGGY 3 cut(s) 204, 242, 266
BsrI ACTGG 4 cut(s) 68, 177, 909, 1230
BssAI RCCGGY 3 cut(s) 204, 242, 266
BssECI CCNNGG 4 cut(s) 356, 750, 784, 1103
BssMI GATC 1 cut(s) 109
BssT1I CCWWGG 1 cut(s) 750
Bst2UI CCWGG 6 cut(s) 357, 592, 597, 1104, 1234, 1244
Bst4CI ACNGT 5 cut(s) 454, 772, 934, 976, 1149
Bst6I CTCTTC 1 cut(s) 882
BstAPI GCANNNNNTGC 1 cut(s) 1217
BstBAI YACGTR 1 cut(s) 737
BstC8I GCNNGC 1 cut(s) 57
BstDEI CTNAG 2 cut(s) 477, 1035
BstDSI CCRYGG 1 cut(s) 784
BstF5I GGATG 3 cut(s) 213, 310, 377
BstKTI GATC 1 cut(s) 112
BstMBI GATC 1 cut(s) 109
BstMCI CGRYCG 1 cut(s) 112
BstMWI GCNNNNNNNGC 5 cut(s) 252, 293, 392, 1217, 1226
BstNI CCWGG 6 cut(s) 357, 592, 597, 1104, 1234, 1244
BstNSI RCATGY 3 cut(s) 89, 533, 557
BstSCI CCNGG 6 cut(s) 355, 590, 595, 1102, 1232, 1242
BstSLI GKGCMC 1 cut(s) 1034
BstV1I GCAGC 6 cut(s) 397, 547, 598, 646, 682, 1195
BstV2I GAAGAC 2 cut(s) 1080, 1194
BstXI CCANNNNNNTGG 2 cut(s) 575, 791
BsuRI GGCC 6 cut(s) 255, 587, 595, 600, 1032, 1229
BtgI CCRYGG 1 cut(s) 784
BtrI CACGTC 1 cut(s) 1192
BtsCI GGATG 3 cut(s) 213, 310, 377
BtsI GCAGTG 2 cut(s) 11, 528
BtsIMutI CAGTG 7 cut(s) 11, 528, 541, 588, 916, 1058, 1223
Cac8I GCNNGC 1 cut(s) 57
CciI TCATGA 1 cut(s) 1315
Cfr10I RCCGGY 3 cut(s) 204, 242, 266
Cfr13I GGNCC 5 cut(s) 264, 272, 599, 1030, 1031
Csp6I GTAC 4 cut(s) 834, 1000, 1108, 1237
CspAI ACCGGT 1 cut(s) 266
CviQI GTAC 4 cut(s) 834, 1000, 1108, 1237
DdeI CTNAG 2 cut(s) 477, 1035
DpnI GATC 1 cut(s) 111
DpnII GATC 1 cut(s) 109
DriI GACNNNNNGTC 1 cut(s) 270
EaeI YGGCCR 2 cut(s) 585, 1227
Eam1104I CTCTTC 1 cut(s) 882
Eam1105I GACNNNNNGTC 1 cut(s) 270
EarI CTCTTC 1 cut(s) 882
EciI GGCGGA 2 cut(s) 264, 1085
Eco130I CCWWGG 1 cut(s) 750
Eco147I AGGCCT 1 cut(s) 595
Eco24I GRGCYC 2 cut(s) 44, 1034
Eco47I GGWCC 2 cut(s) 264, 272
Eco72I CACGTG 1 cut(s) 737
EcoO109I RGGNCCY 1 cut(s) 1031
EcoRII CCWGG 6 cut(s) 355, 590, 595, 1102, 1232, 1242
EcoT14I CCWWGG 1 cut(s) 750
EcoT22I ATGCAT 3 cut(s) 369, 1164, 1222
EcoT38I GRGCYC 2 cut(s) 44, 1034
ErhI CCWWGG 1 cut(s) 750
FalI AAGNNNNNCTT 4 cut(s) 845, 877, 1179, 1211
FaqI GGGAC 2 cut(s) 277, 463
Fnu4HI GCNGC 7 cut(s) 411, 561, 612, 660, 696, 1209, 1230
FokI GGATG 3 cut(s) 200, 317, 384
FriOI GRGCYC 2 cut(s) 44, 1034
Fsp4HI GCNGC 7 cut(s) 411, 561, 612, 660, 696, 1209, 1230
FspBI CTAG 1 cut(s) 900
GluI GCNGC 7 cut(s) 411, 561, 612, 660, 696, 1209, 1230
GsaI CCCAGC 1 cut(s) 212
HaeIII GGCC 6 cut(s) 255, 587, 595, 600, 1032, 1229
HapII CCGG 5 cut(s) 205, 243, 267, 812, 1006
HindIII AAGCTT 1 cut(s) 182
HinfI GANTC 3 cut(s) 755, 815, 882
HpaII CCGG 5 cut(s) 205, 243, 267, 812, 1006
HphI GGTGA 2 cut(s) 130, 1158
Hpy166II GTNNAC 2 cut(s) 377, 1183
Hpy188I TCNGA 6 cut(s) 128, 191, 293, 918, 1038, 1178
Hpy188III TCNNGA 6 cut(s) 80, 425, 812, 1006, 1091, 1316
Hpy8I GTNNAC 2 cut(s) 377, 1183
HpyAV CCTTC 4 cut(s) 123, 476, 509, 640
HpyCH4III ACNGT 5 cut(s) 454, 772, 934, 976, 1149
HpyCH4IV ACGT 2 cut(s) 736, 1191
HpyF10VI GCNNNNNNNGC 5 cut(s) 252, 293, 392, 1217, 1226
HpyF3I CTNAG 2 cut(s) 477, 1035
HpySE526I ACGT 2 cut(s) 736, 1191
Kpn2I TCCGGA 2 cut(s) 811, 1005
KpnI GGTACC 1 cut(s) 1240
Kzo9I GATC 1 cut(s) 109
LmnI GCTCC 6 cut(s) 52, 337, 407, 494, 526, 1205
Lsp1109I GCAGC 6 cut(s) 397, 547, 598, 646, 682, 1195
LweI GCATC 5 cut(s) 222, 295, 354, 373, 1229
MaeI CTAG 1 cut(s) 900
MaeII ACGT 2 cut(s) 736, 1191
MaeIII GTNAC 3 cut(s) 549, 766, 820
MalI GATC 1 cut(s) 111
MboI GATC 1 cut(s) 109
MboII GAAGA 7 cut(s) 27, 373, 899, 1085, 1105, 1141, 1199
MfeI CAATTG 1 cut(s) 825
MhlI GDGCHC 3 cut(s) 44, 342, 1034
MlsI TGGCCA 1 cut(s) 587
MluCI AATT 8 cut(s) 167, 351, 440, 663, 779, 825, 948, 1098
MluNI TGGCCA 1 cut(s) 587
MmeI TCCRAC 3 cut(s) 493, 754, 892
Mox20I TGGCCA 1 cut(s) 587
Mph1103I ATGCAT 3 cut(s) 369, 1164, 1222
MroI TCCGGA 2 cut(s) 811, 1005
MroXI GAANNNNTTC 1 cut(s) 1098
MscI TGGCCA 1 cut(s) 587
MseI TTAA 2 cut(s) 801, 873
MslI CAYNNNNRTG 4 cut(s) 372, 534, 789, 1298
Msp20I TGGCCA 1 cut(s) 587
MspA1I CMGCKG 1 cut(s) 476
MspI CCGG 5 cut(s) 205, 243, 267, 812, 1006
MspR9I CCNGG 6 cut(s) 357, 592, 597, 1104, 1234, 1244
MunI CAATTG 1 cut(s) 825
Mva1269I GAATGC 2 cut(s) 1162, 1211
MvaI CCWGG 6 cut(s) 357, 592, 597, 1104, 1234, 1244
MwoI GCNNNNNNNGC 5 cut(s) 252, 293, 392, 1217, 1226
NdeII GATC 1 cut(s) 109
NlaIV GGNNCC 3 cut(s) 265, 1032, 1238
NmuCI GTSAC 1 cut(s) 766
NsiI ATGCAT 3 cut(s) 369, 1164, 1222
NspI RCATGY 3 cut(s) 89, 533, 557
OliI CACNNNNGTG 1 cut(s) 789
PagI TCATGA 1 cut(s) 1315
PceI AGGCCT 1 cut(s) 595
PciI ACATGT 1 cut(s) 553
PcsI WCGNNNNNNNCGW 1 cut(s) 105
PctI GAATGC 2 cut(s) 1162, 1211
PdmI GAANNNNTTC 1 cut(s) 1098
PfeI GAWTC 3 cut(s) 755, 815, 882
PfoI TCCNGGA 1 cut(s) 1242
PinAI ACCGGT 1 cut(s) 266
PkrI GCNGC 7 cut(s) 412, 562, 613, 661, 697, 1210, 1231
Ple19I CGATCG 1 cut(s) 112
PmaCI CACGTG 1 cut(s) 737
PmlI CACGTG 1 cut(s) 737
Ppu21I YACGTR 1 cut(s) 737
PscI ACATGT 1 cut(s) 553
Psp6I CCWGG 6 cut(s) 355, 590, 595, 1102, 1232, 1242
PspCI CACGTG 1 cut(s) 737
PspFI CCCAGC 1 cut(s) 208
PspGI CCWGG 6 cut(s) 355, 590, 595, 1102, 1232, 1242
PspN4I GGNNCC 3 cut(s) 265, 1032, 1238
PspOMI GGGCCC 1 cut(s) 1030
PspPI GGNCC 5 cut(s) 264, 272, 599, 1030, 1031
PvuI CGATCG 1 cut(s) 112
PvuII CAGCTG 1 cut(s) 476
RsaI GTAC 4 cut(s) 835, 1001, 1109, 1238
RsaNI GTAC 4 cut(s) 834, 1000, 1108, 1237
RseI CAYNNNNRTG 4 cut(s) 372, 534, 789, 1298
SaqAI TTAA 2 cut(s) 801, 873
SatI GCNGC 7 cut(s) 411, 561, 612, 660, 696, 1209, 1230
Sau3AI GATC 1 cut(s) 109
Sau96I GGNCC 5 cut(s) 264, 272, 599, 1030, 1031
ScaI AGTACT 1 cut(s) 1001
ScrFI CCNGG 6 cut(s) 357, 592, 597, 1104, 1234, 1244
SduI GDGCHC 3 cut(s) 44, 342, 1034
SfaNI GCATC 5 cut(s) 222, 295, 354, 373, 1229
SinI GGWCC 2 cut(s) 264, 272
SmiMI CAYNNNNRTG 4 cut(s) 372, 534, 789, 1298
SmlI CTYRAG 1 cut(s) 1140
SmoI CTYRAG 1 cut(s) 1140
Sse9I AATT 8 cut(s) 167, 351, 440, 663, 779, 825, 948, 1098
SseBI AGGCCT 1 cut(s) 595
SsiI CCGC 3 cut(s) 275, 1070, 1230
SspI AATATT 1 cut(s) 690
SspMI CTAG 1 cut(s) 900
StuI AGGCCT 1 cut(s) 595
StyD4I CCNGG 6 cut(s) 355, 590, 595, 1102, 1232, 1242
StyI CCWWGG 1 cut(s) 750
TaaI ACNGT 5 cut(s) 454, 772, 934, 976, 1149
TaiI ACGT 2 cut(s) 739, 1194
TaqI TCGA 4 cut(s) 38, 108, 885, 1020
TasI AATT 8 cut(s) 167, 351, 440, 663, 779, 825, 948, 1098
TatI WGTACW 1 cut(s) 999
TauI GCSGC 1 cut(s) 1232
TfiI GAWTC 3 cut(s) 755, 815, 882
Tru1I TTAA 2 cut(s) 801, 873
Tru9I TTAA 2 cut(s) 801, 873
TscAI CASTG 7 cut(s) 18, 528, 541, 588, 916, 1065, 1230
TseFI GTSAC 1 cut(s) 766
TseI GCWGC 6 cut(s) 410, 560, 611, 659, 695, 1208
Tsp45I GTSAC 1 cut(s) 766
TspDTI ATGAA 6 cut(s) 156, 528, 960, 1142, 1304, 1316
TspGWI ACGGA 1 cut(s) 801
TspRI CASTG 7 cut(s) 18, 528, 541, 588, 916, 1065, 1230
VpaK11BI GGWCC 2 cut(s) 264, 272
XapI RAATTY 3 cut(s) 167, 351, 779
XceI RCATGY 3 cut(s) 89, 533, 557
XcmI CCANNNNNNNNNTGG 2 cut(s) 580, 1240
XmnI GAANNNNTTC 1 cut(s) 1098
XspI CTAG 1 cut(s) 900
ZrmI AGTACT 1 cut(s) 1001
Zsp2I ATGCAT 3 cut(s) 369, 1164, 1222
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.