Rmu_sc0004559.1_g000001

Amino-acid acetyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004559.1
OG0002453
Physical Location & Seq
Forward (+)
260 .. 1919
1660 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1149 bp
atggccgccaccttcctctccacccactgccacgtcacttccaccgccgcccactctccctcgctccgccgcttttccctcaccgcaaccgctaatccctcccggctggcgatggtaaatagtcggccggcgaagggcagaattggaatgtcgcacaaggccaatgctgctgcgttcgggccggtgatggaggacagcgagagcgacggcgagaactataactcgacggaggacgagctgttcgtgcggtggttccgggaggcttggccgtacctctgggcccaccgcggcgccactttcgtcgtgatcatctgcggcgaaattgtgaacagccctcatcacttggaccctattctaaaggatattgcttttcttcatcacctggggatcaagtttgttcttgttccagggacccatgtcgaaatcgatacccttttggctcagagaagcaagagtccaaagtttgctggtcagtatagagtgaccgactcggattctctaacagctgcaaaggaagctgctgggaagatttctatggatatagaggcaaagctttcgcccggaccctccatatgcaatattcgtcggcatggtgatagtagtcgttggcatgaagttggcgtcagtgtagctagtggtaactttcttgcagccaagaggagaggagtcgttgctggtgttgattatggggcaacaggtgaagttaagaaagtggatgtggttcgcatgcgagagaggcttgatgcgggttgtattgtgctattgagcaaccttggttattcgagctctggagaagttttaaattgcaacacgtatgaagttgcaacagcttgttccttggctattggagcagataagcttatctgcataatggatggtccaattcttgatgagagtggacgtctgattcgtttcttgactcttgaagaagcagacaagttgattcgtcagcgggctaagcaaagtgaaatagccgctagctatgtgaaagctgttgatgaagaaaatctccattatcttggacatgatagtgggaattttcttaaggaaaagcatattccaaggtttaacaatggtgttggttttgagaatggcaatggattgtggtctggtgaacaaggttttgccacgagcgccaaagtcgattaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00220 ko01100 ko01110 ko01130 ko01210 ko01230 map00220 map01100 map01110 map01130 map01210 map01230
Pfam Domains
Protein Families
AA_kinase Acetyltransf_1

Protein Analysis

382

Amino Acids

41.55

Weight (kDa)

6.74

Isoelectric Point (pI)

40.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AA_kinase PF00696 99 - 321 2.5e-12 Amino acid kinase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 904
AccB1I GGYRCC 1 cut(s) 290
AccII CGCG 1 cut(s) 288
AclWI GGATC 1 cut(s) 395
AcoI YGGCCR 3 cut(s) 3, 125, 266
AcsI RAATTY 1 cut(s) 1036
AcyI GRCGYC 3 cut(s) 291, 621, 901
AfaI GTAC 1 cut(s) 272
AfiI CCNNNNNNNGG 1 cut(s) 134
AflII CTTAAG 1 cut(s) 1043
AflIII ACRYGT 1 cut(s) 810
AgsI TTSAA 1 cut(s) 926
AjiI CACGTC 1 cut(s) 34
AjnI CCWGG 2 cut(s) 381, 406
AloI GAACNNNNNNTCC 2 cut(s) 224, 256
Alw21I GWGCWC 1 cut(s) 788
AlwI GGATC 1 cut(s) 395
AoxI GGCC 6 cut(s) 3, 125, 159, 179, 266, 279
ApaI GGGCCC 1 cut(s) 283
ApeKI GCWGC 5 cut(s) 167, 170, 506, 518, 650
ApoI RAATTY 1 cut(s) 1036
ArsI GACNNNNNNTTYG 4 cut(s) 224, 256, 891, 923
AspLEI GCGC 2 cut(s) 293, 1136
AspS9I GGNCC 7 cut(s) 179, 279, 280, 346, 411, 563, 878
AsuC2I CCSGG 3 cut(s) 103, 257, 561
AsuHPI GGTGA 6 cut(s) 73, 196, 371, 605, 710, 1124
AsuNHI GCTAGC 1 cut(s) 977
AvaII GGWCC 4 cut(s) 346, 411, 563, 878
BaeGI GKGCMC 1 cut(s) 283
BanI GGYRCC 1 cut(s) 290
BanII GRGCYC 2 cut(s) 283, 788
BauI CACGAG 1 cut(s) 1129
Bbv12I GWGCWC 1 cut(s) 788
BbvI GCAGC 5 cut(s) 154, 157, 493, 505, 662
BccI CCATC 3 cut(s) 106, 181, 869
BceAI ACGGC 2 cut(s) 223, 253
BcgI CGANNNNNNTGC 2 cut(s) 537, 571
BciT130I CCWGG 2 cut(s) 383, 408
BclI TGATCA 1 cut(s) 306
BcnI CCSGG 3 cut(s) 103, 257, 561
BfaI CTAG 2 cut(s) 633, 978
BfoI RGCGCY 2 cut(s) 294, 1137
BfrI CTTAAG 1 cut(s) 1043
BlpI GCTNAGC 1 cut(s) 957
Bme1390I CCNGG 5 cut(s) 103, 257, 383, 408, 561
Bme18I GGWCC 4 cut(s) 346, 411, 563, 878
BmgBI CACGTC 1 cut(s) 34
BmgT120I GGNCC 7 cut(s) 179, 279, 280, 346, 411, 563, 878
BmiI GGNNCC 7 cut(s) 254, 281, 292, 348, 412, 413, 565
BmrFI CCNGG 5 cut(s) 103, 257, 383, 408, 561
BmsI GCATC 1 cut(s) 733
BmtI GCTAGC 1 cut(s) 981
BoxI GACNNNNGTC 1 cut(s) 416
BpmI CTGGAG 1 cut(s) 810
Bpu1102I GCTNAGC 1 cut(s) 957
BpuMI CCSGG 3 cut(s) 103, 257, 561
Bsa29I ATCGAT 1 cut(s) 426
BsaAI YACGTR 1 cut(s) 813
BsaHI GRCGYC 3 cut(s) 291, 621, 901
BsaJI CCNNGG 6 cut(s) 286, 382, 407, 772, 837, 1061
Bsc4I CCNNNNNNNGG 1 cut(s) 134
Bse118I RCCGGY 2 cut(s) 127, 181
Bse3DI GCAATG 1 cut(s) 1102
BseBI CCWGG 2 cut(s) 383, 408
BseCI ATCGAT 1 cut(s) 426
BseDI CCNNGG 6 cut(s) 286, 382, 407, 772, 837, 1061
BseGI GGATG 2 cut(s) 721, 880
BseLI CCNNNNNNNGG 1 cut(s) 134
BseMI GCAATG 1 cut(s) 1102
BseMII CTCAG 1 cut(s) 455
BseRI GAGGAG 2 cut(s) 673, 678
BseSI GKGCMC 1 cut(s) 283
BseX3I CGGCCG 1 cut(s) 125
BseXI GCAGC 5 cut(s) 154, 157, 493, 505, 662
BseYI CCCAGC 1 cut(s) 521
Bsh1236I CGCG 1 cut(s) 288
Bsh1285I CGRYCG 1 cut(s) 128
BshFI GGCC 6 cut(s) 5, 127, 161, 181, 268, 281
BshNI GGYRCC 1 cut(s) 290
BshVI ATCGAT 1 cut(s) 426
BsiEI CGRYCG 1 cut(s) 128
BsiHKAI GWGCWC 1 cut(s) 788
BsiSI CCGG 5 cut(s) 103, 128, 182, 256, 561
BslFI GGGAC 1 cut(s) 424
BslI CCNNNNNNNGG 1 cut(s) 134
BsmFI GGGAC 1 cut(s) 424
BsnI GGCC 6 cut(s) 5, 127, 161, 181, 268, 281
Bsp120I GGGCCC 1 cut(s) 279
Bsp1286I GDGCHC 2 cut(s) 283, 788
Bsp143I GATC 2 cut(s) 306, 387
Bsp1720I GCTNAGC 1 cut(s) 957
BspANI GGCC 6 cut(s) 5, 127, 161, 181, 268, 281
BspCNI CTCAG 1 cut(s) 454
BspDI ATCGAT 1 cut(s) 426
BspFNI CGCG 1 cut(s) 288
BspLI GGNNCC 7 cut(s) 254, 281, 292, 348, 412, 413, 565
BspOI GCTAGC 1 cut(s) 981
BspPI GGATC 1 cut(s) 395
BspT107I GGYRCC 1 cut(s) 290
BspTI CTTAAG 1 cut(s) 1043
BsrDI GCAATG 1 cut(s) 1102
BsrFI RCCGGY 2 cut(s) 127, 181
BssAI RCCGGY 2 cut(s) 127, 181
BssECI CCNNGG 6 cut(s) 286, 382, 407, 772, 837, 1061
BssMI GATC 2 cut(s) 306, 387
BssNI GRCGYC 3 cut(s) 291, 621, 901
BssSI CACGAG 1 cut(s) 1129
BssT1I CCWWGG 3 cut(s) 772, 837, 1061
Bst2BI CACGAG 1 cut(s) 1129
Bst2UI CCWGG 2 cut(s) 383, 408
BstACI GRCGYC 3 cut(s) 291, 621, 901
BstAFI CTTAAG 1 cut(s) 1043
BstBAI YACGTR 1 cut(s) 813
BstC8I GCNNGC 5 cut(s) 108, 129, 728, 954, 979
BstDEI CTNAG 2 cut(s) 441, 957
BstDSI CCRYGG 1 cut(s) 286
BstF5I GGATG 2 cut(s) 721, 880
BstFNI CGCG 1 cut(s) 288
BstH2I RGCGCY 2 cut(s) 294, 1137
BstHHI GCGC 2 cut(s) 293, 1136
BstKTI GATC 2 cut(s) 309, 390
BstMBI GATC 2 cut(s) 306, 387
BstMCI CGRYCG 1 cut(s) 128
BstMWI GCNNNNNNNGC 7 cut(s) 167, 244, 515, 736, 848, 958, 1133
BstNI CCWGG 2 cut(s) 383, 408
BstNSI RCATGY 1 cut(s) 730
BstPAI GACNNNNGTC 1 cut(s) 416
BstSCI CCNGG 5 cut(s) 101, 255, 381, 406, 559
BstSLI GKGCMC 1 cut(s) 283
BstUI CGCG 1 cut(s) 288
BstV1I GCAGC 5 cut(s) 154, 157, 493, 505, 662
BstXI CCANNNNNNTGG 1 cut(s) 1019
BstZI CGGCCG 1 cut(s) 125
Bsu15I ATCGAT 1 cut(s) 426
BsuRI GGCC 6 cut(s) 5, 127, 161, 181, 268, 281
BsuTUI ATCGAT 1 cut(s) 426
BtgI CCRYGG 1 cut(s) 286
BtgZI GCGATG 1 cut(s) 125
BtrI CACGTC 1 cut(s) 34
BtsCI GGATG 2 cut(s) 721, 880
BtsI GCAGTG 1 cut(s) 25
BtsIMutI CAGTG 2 cut(s) 25, 631
Cac8I GCNNGC 5 cut(s) 108, 129, 728, 954, 979
CfoI GCGC 2 cut(s) 293, 1136
Cfr10I RCCGGY 2 cut(s) 127, 181
Cfr13I GGNCC 7 cut(s) 179, 279, 280, 346, 411, 563, 878
Cfr42I CCGCGG 1 cut(s) 289
ClaI ATCGAT 1 cut(s) 426
CseI GACGC 1 cut(s) 610
Csp6I GTAC 1 cut(s) 271
CviAII CATG 5 cut(s) 416, 590, 611, 727, 1025
CviQI GTAC 1 cut(s) 271
DdeI CTNAG 2 cut(s) 441, 957
DinI GGCGCC 1 cut(s) 292
DpnI GATC 2 cut(s) 308, 389
DpnII GATC 2 cut(s) 306, 387
DraI TTTAAA 1 cut(s) 801
EaeI YGGCCR 3 cut(s) 3, 125, 266
EagI CGGCCG 1 cut(s) 125
EciI GGCGGA 1 cut(s) 56
Ecl136II GAGCTC 1 cut(s) 786
EclXI CGGCCG 1 cut(s) 125
Eco130I CCWWGG 3 cut(s) 772, 837, 1061
Eco24I GRGCYC 2 cut(s) 283, 788
Eco47I GGWCC 4 cut(s) 346, 411, 563, 878
Eco52I CGGCCG 1 cut(s) 125
Eco53kI GAGCTC 1 cut(s) 786
EcoICRI GAGCTC 1 cut(s) 786
EcoO109I RGGNCCY 1 cut(s) 411
EcoRII CCWGG 2 cut(s) 381, 406
EcoT14I CCWWGG 3 cut(s) 772, 837, 1061
EcoT38I GRGCYC 2 cut(s) 283, 788
EgeI GGCGCC 1 cut(s) 292
EheI GGCGCC 1 cut(s) 292
ErhI CCWWGG 3 cut(s) 772, 837, 1061
FaeI CATG 5 cut(s) 419, 593, 614, 730, 1028
FaqI GGGAC 1 cut(s) 424
FatI CATG 5 cut(s) 415, 589, 610, 726, 1024
FauI CCCGC 2 cut(s) 739, 945
FauNDI CATATG 1 cut(s) 572
FbaI TGATCA 1 cut(s) 306
FokI GGATG 2 cut(s) 728, 887
FriOI GRGCYC 2 cut(s) 283, 788
FspBI CTAG 2 cut(s) 633, 978
GlaI GCGC 2 cut(s) 292, 1135
GsaI CCCAGC 1 cut(s) 525
GsuI CTGGAG 1 cut(s) 810
HaeII RGCGCY 2 cut(s) 294, 1137
HaeIII GGCC 6 cut(s) 5, 127, 161, 181, 268, 281
HapII CCGG 5 cut(s) 103, 128, 182, 256, 561
HgaI GACGC 1 cut(s) 610
HhaI GCGC 2 cut(s) 293, 1136
Hin1I GRCGYC 3 cut(s) 291, 621, 901
Hin1II CATG 5 cut(s) 419, 593, 614, 730, 1028
Hin6I GCGC 2 cut(s) 291, 1134
HinP1I GCGC 2 cut(s) 291, 1134
HindIII AAGCTT 2 cut(s) 551, 857
HinfI GANTC 7 cut(s) 454, 488, 494, 666, 907, 919, 943
HpaII CCGG 5 cut(s) 103, 128, 182, 256, 561
HphI GGTGA 6 cut(s) 73, 196, 371, 605, 710, 1124
Hpy166II GTNNAC 3 cut(s) 328, 899, 1115
Hpy188I TCNGA 3 cut(s) 444, 493, 906
Hpy188III TCNNGA 5 cut(s) 304, 789, 887, 916, 923
Hpy8I GTNNAC 3 cut(s) 328, 899, 1115
Hpy99I CGWCG 4 cut(s) 209, 229, 305, 588
HpyAV CCTTC 2 cut(s) 22, 127
HpyCH4IV ACGT 3 cut(s) 33, 812, 901
HpyCH4V TGCA 6 cut(s) 509, 576, 650, 807, 824, 867
HpyF10VI GCNNNNNNNGC 7 cut(s) 167, 244, 515, 736, 848, 958, 1133
HpyF3I CTNAG 2 cut(s) 441, 957
HpySE526I ACGT 3 cut(s) 33, 812, 901
Hsp92I GRCGYC 3 cut(s) 291, 621, 901
Hsp92II CATG 5 cut(s) 419, 593, 614, 730, 1028
HspAI GCGC 2 cut(s) 291, 1134
KasI GGCGCC 1 cut(s) 290
KflI GGGWCCC 1 cut(s) 411
KroI GCCGGC 1 cut(s) 127
KroNI GCCGGC 1 cut(s) 129
Ksp22I TGATCA 1 cut(s) 306
KspI CCGCGG 1 cut(s) 289
Kzo9I GATC 2 cut(s) 306, 387
LmnI GCTCC 2 cut(s) 69, 848
Lsp1109I GCAGC 5 cut(s) 154, 157, 493, 505, 662
LweI GCATC 1 cut(s) 733
MaeI CTAG 2 cut(s) 633, 978
MaeII ACGT 3 cut(s) 33, 812, 901
MaeIII GTNAC 3 cut(s) 34, 481, 638
MalI GATC 2 cut(s) 308, 389
MboI GATC 2 cut(s) 306, 387
MboII GAAGA 4 cut(s) 365, 538, 938, 1013
MhlI GDGCHC 2 cut(s) 283, 788
MluCI AATT 5 cut(s) 141, 321, 802, 882, 1036
Mly113I GGCGCC 1 cut(s) 291
MlyI GAGTC 4 cut(s) 463, 482, 675, 913
MroNI GCCGGC 1 cut(s) 127
MseI TTAA 5 cut(s) 705, 800, 1044, 1068, 1147
MslI CAYNNNNRTG 1 cut(s) 1029
MspA1I CMGCKG 3 cut(s) 288, 506, 952
MspCI CTTAAG 1 cut(s) 1043
MspI CCGG 5 cut(s) 103, 128, 182, 256, 561
MspR9I CCNGG 5 cut(s) 103, 257, 383, 408, 561
MvaI CCWGG 2 cut(s) 383, 408
MvnI CGCG 1 cut(s) 288
MwoI GCNNNNNNNGC 7 cut(s) 167, 244, 515, 736, 848, 958, 1133
NaeI GCCGGC 1 cut(s) 129
NarI GGCGCC 1 cut(s) 291
NciI CCSGG 3 cut(s) 103, 257, 561
NdeI CATATG 1 cut(s) 572
NdeII GATC 2 cut(s) 306, 387
NgoMIV GCCGGC 1 cut(s) 127
NheI GCTAGC 1 cut(s) 977
NlaIII CATG 5 cut(s) 419, 593, 614, 730, 1028
NlaIV GGNNCC 7 cut(s) 254, 281, 292, 348, 412, 413, 565
NmuCI GTSAC 2 cut(s) 34, 481
NspI RCATGY 1 cut(s) 730
PaeI GCATGC 1 cut(s) 730
PcsI WCGNNNNNNNCGW 2 cut(s) 240, 907
PdiI GCCGGC 1 cut(s) 129
PfeI GAWTC 3 cut(s) 494, 907, 943
PfoI TCCNGGA 1 cut(s) 255
PleI GAGTC 4 cut(s) 462, 482, 674, 913
PluTI GGCGCC 1 cut(s) 294
PpsI GAGTC 4 cut(s) 462, 482, 674, 913
Ppu21I YACGTR 1 cut(s) 813
PpuMI RGGWCCY 1 cut(s) 411
PshAI GACNNNNGTC 1 cut(s) 416
Psp124BI GAGCTC 1 cut(s) 788
Psp5II RGGWCCY 1 cut(s) 411
Psp6I CCWGG 2 cut(s) 381, 406
PspFI CCCAGC 1 cut(s) 521
PspGI CCWGG 2 cut(s) 381, 406
PspN4I GGNNCC 7 cut(s) 254, 281, 292, 348, 412, 413, 565
PspOMI GGGCCC 1 cut(s) 279
PspPI GGNCC 7 cut(s) 179, 279, 280, 346, 411, 563, 878
PspPPI RGGWCCY 1 cut(s) 411
PvuII CAGCTG 1 cut(s) 506
RsaI GTAC 1 cut(s) 272
RsaNI GTAC 1 cut(s) 271
RseI CAYNNNNRTG 1 cut(s) 1029
SacI GAGCTC 1 cut(s) 788
SacII CCGCGG 1 cut(s) 289
SaqAI TTAA 5 cut(s) 705, 800, 1044, 1068, 1147
Sau3AI GATC 2 cut(s) 306, 387
Sau96I GGNCC 7 cut(s) 179, 279, 280, 346, 411, 563, 878
SchI GAGTC 4 cut(s) 463, 482, 675, 913
ScrFI CCNGG 5 cut(s) 103, 257, 383, 408, 561
SduI GDGCHC 2 cut(s) 283, 788
SfaNI GCATC 1 cut(s) 733
SfoI GGCGCC 1 cut(s) 292
Sfr303I CCGCGG 1 cut(s) 289
SgrBI CCGCGG 1 cut(s) 289
SinI GGWCC 4 cut(s) 346, 411, 563, 878
SmiMI CAYNNNNRTG 1 cut(s) 1029
SmlI CTYRAG 1 cut(s) 1043
SmoI CTYRAG 1 cut(s) 1043
SphI GCATGC 1 cut(s) 730
Sse9I AATT 5 cut(s) 141, 321, 802, 882, 1036
SspDI GGCGCC 1 cut(s) 290
SspI AATATT 1 cut(s) 580
SspMI CTAG 2 cut(s) 633, 978
SstI GAGCTC 1 cut(s) 788
StyD4I CCNGG 5 cut(s) 101, 255, 381, 406, 559
StyI CCWWGG 3 cut(s) 772, 837, 1061
TaiI ACGT 3 cut(s) 36, 815, 904
TaqI TCGA 5 cut(s) 224, 420, 426, 782, 1143
TaqII GACCGA 1 cut(s) 500
TasI AATT 5 cut(s) 141, 321, 802, 882, 1036
TauI GCSGC 6 cut(s) 8, 50, 72, 291, 318, 977
TfiI GAWTC 3 cut(s) 494, 907, 943
Tru1I TTAA 5 cut(s) 705, 800, 1044, 1068, 1147
Tru9I TTAA 5 cut(s) 705, 800, 1044, 1068, 1147
TscAI CASTG 2 cut(s) 32, 631
TseFI GTSAC 2 cut(s) 34, 481
TseI GCWGC 5 cut(s) 167, 170, 506, 518, 650
Tsp45I GTSAC 2 cut(s) 34, 481
TspDTI ATGAA 4 cut(s) 365, 627, 831, 1014
TspGWI ACGGA 1 cut(s) 242
TspRI CASTG 2 cut(s) 32, 631
Vha464I CTTAAG 1 cut(s) 1043
VpaK11BI GGWCC 4 cut(s) 346, 411, 563, 878
XapI RAATTY 1 cut(s) 1036
XceI RCATGY 1 cut(s) 730
XspI CTAG 2 cut(s) 633, 978
ZraI GACGTC 1 cut(s) 902
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.