Rorug02G0151900

Amino-acid acetyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0002453
Physical Location & Seq
Reverse (-)
13427920 .. 13430622
2703 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0151900.1

Sequence Viewer

Length: 936 bp
ATGAACATTCCGATGACCGAATCTTCTTCTCGCCGTCAGCTTACAGGTGACTCTTTGATTTTCAGCTTTCTGTGTAATTTGGCTCTTGGTTGTATTCGTGTTCTGATTTTGGGTCTGTATGGGATAGAACAAAAACTTGAGGAGGGAGGAACCCCCAAAACGAATTCGAATAAAAACCCCCAAAAAGATTCTAACTTTGAAATCGGAGGACTCCCAAAACCTATAAAGTTTCAGACTTTGAGTCTTCTTCGTGGAAGCAAGTGCATACTGGACTCGGCCACAGCTTCAGTTTCAGTCAACCCTGTGTCTCTCTTTTGCTTTGATGAAGCAAATTTGAAGGCTGCTGTCGCTGTTCAAGCAGGTGTTTGCGTAGACATCTTTGCTGTTACAAATGAGTATACAGATTTGGCGTCTCTGAAGTTTCTTAGCGTAGAAAGTGGAGGCTCATTGTACTTTTATTCAAATACTGATGATTCAACACTTCCACAGGACATGTACCGGATGCTAAGTCGACCATATGCTTTTGGCTGTGTGCTGCGATTGAGGACATCATCTGAATTCAAAACTGGTCATTCTGTAAGTTTCCTTATGGTTGTGGTATACCCATTCGGGTCGCCACAGTGGGGTGAGGCGCGCTCCCAGATAGGCGGACCTCACAATGGTCACTTCTTTCCAGATCCACAGTATGAGAATGGTCAACACATTATCTGTTGTGATTCTTCCGCCACATATGCTTATGACTTTGAGTTTGAAGCTACCAAGGAATTTGCAAAAGCTCTGGAAGCACATTTAGATCCCAAACAACAGCCCACTTCCGTTTGTAGGAAGCATCCAGTAATGGATAATAGCTTACTGTGCAGCTGTTTTGACTTTTATGTGGTTCTCATGGCAAAAAGAGCAAAGCAAATGAAAGCAAGTGCAAAGCTCACAAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00220 ko01100 ko01110 ko01130 ko01210 ko01230 map00220 map01100 map01110 map01130 map01210 map01230
Pfam Domains
Protein Families
AA_kinase Acetyltransf_1

Protein Analysis

311

Amino Acids

34.33

Weight (kDa)

6.97

Isoelectric Point (pI)

45.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sec23_trunk PF04811 116 - 168 3e-08 Sec23/Sec24 trunk domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 350
Acc36I ACCTGC 1 cut(s) 350
AccI GTMKAC 4 cut(s) 372, 398, 511, 600
AccII CGCG 1 cut(s) 634
AciI CCGC 2 cut(s) 648, 723
AclWI GGATC 2 cut(s) 671, 788
AcoI YGGCCR 1 cut(s) 276
AcsI RAATTY 4 cut(s) 163, 331, 557, 764
AcuI CTGAAG 2 cut(s) 270, 437
AcyI GRCGYC 1 cut(s) 410
AfaI GTAC 2 cut(s) 452, 497
AfiI CCNNNNNNNGG 3 cut(s) 623, 659, 822
AflIII ACRYGT 1 cut(s) 492
AgsI TTSAA 7 cut(s) 200, 337, 356, 462, 477, 562, 752
AhdI GACNNNNNGTC 1 cut(s) 240
AluBI AGCT 8 cut(s) 40, 66, 284, 755, 776, 849, 861, 925
AluI AGCT 8 cut(s) 40, 66, 284, 755, 776, 849, 861, 925
Alw26I GTCTC 2 cut(s) 312, 417
AlwI GGATC 2 cut(s) 671, 788
AoxI GGCC 1 cut(s) 276
ApeKI GCWGC 3 cut(s) 341, 535, 858
ApoI RAATTY 4 cut(s) 163, 331, 557, 764
ArsI GACNNNNNNTTYG 2 cut(s) 731, 763
AspLEI GCGC 2 cut(s) 634, 636
AspS9I GGNCC 1 cut(s) 650
AsuHPI GGTGA 2 cut(s) 59, 638
AsuII TTCGAA 1 cut(s) 167
AvaII GGWCC 1 cut(s) 650
BbsI GAAGAC 1 cut(s) 236
BbvI GCAGC 3 cut(s) 328, 522, 870
BceAI ACGGC 1 cut(s) 18
BcoDI GTCTC 2 cut(s) 312, 417
BfuAI ACCTGC 1 cut(s) 350
BisI GCNGC 3 cut(s) 342, 536, 859
BlsI GCNGC 3 cut(s) 343, 537, 860
Bme18I GGWCC 1 cut(s) 650
BmeRI GACNNNNNGTC 1 cut(s) 240
BmgT120I GGNCC 1 cut(s) 650
BmiI GGNNCC 1 cut(s) 151
BmsI GCATC 2 cut(s) 492, 838
BpiI GAAGAC 1 cut(s) 236
BplI GAGNNNNNCTC 2 cut(s) 620, 652
Bpu14I TTCGAA 1 cut(s) 167
BpuEI CTTGAG 1 cut(s) 158
BsaHI GRCGYC 1 cut(s) 410
BsaJI CCNNGG 1 cut(s) 759
BsaWI WCCGGW 1 cut(s) 498
Bsc4I CCNNNNNNNGG 3 cut(s) 623, 659, 822
Bse1I ACTGG 3 cut(s) 273, 571, 833
BseDI CCNNGG 1 cut(s) 759
BseGI GGATG 2 cut(s) 507, 829
BseLI CCNNNNNNNGG 3 cut(s) 623, 659, 822
BseNI ACTGG 3 cut(s) 273, 571, 833
BsePI GCGCGC 1 cut(s) 632
BseRI GAGGAG 1 cut(s) 155
BseXI GCAGC 3 cut(s) 328, 522, 870
BsgI GTGCAG 1 cut(s) 877
Bsh1236I CGCG 1 cut(s) 634
BshFI GGCC 1 cut(s) 278
BsiSI CCGG 1 cut(s) 499
BslI CCNNNNNNNGG 3 cut(s) 623, 659, 822
BsmAI GTCTC 2 cut(s) 312, 417
BsmBI CGTCTC 1 cut(s) 417
BsnI GGCC 1 cut(s) 278
Bsp119I TTCGAA 1 cut(s) 167
Bsp143I GATC 2 cut(s) 676, 793
BspACI CCGC 2 cut(s) 648, 723
BspANI GGCC 1 cut(s) 278
BspFNI CGCG 1 cut(s) 634
BspLI GGNNCC 1 cut(s) 151
BspMI ACCTGC 1 cut(s) 350
BspPI GGATC 2 cut(s) 671, 788
BspT104I TTCGAA 1 cut(s) 167
BsrI ACTGG 3 cut(s) 273, 571, 833
BssECI CCNNGG 1 cut(s) 759
BssHII GCGCGC 1 cut(s) 632
BssMI GATC 2 cut(s) 676, 793
BssNAI GTATAC 2 cut(s) 399, 601
BssNI GRCGYC 1 cut(s) 410
BssT1I CCWWGG 1 cut(s) 759
Bst1107I GTATAC 2 cut(s) 399, 601
Bst4CI ACNGT 3 cut(s) 621, 684, 855
BstACI GRCGYC 1 cut(s) 410
BstBI TTCGAA 1 cut(s) 167
BstC8I GCNNGC 1 cut(s) 634
BstDEI CTNAG 2 cut(s) 425, 506
BstF5I GGATG 2 cut(s) 507, 829
BstFNI CGCG 1 cut(s) 634
BstHHI GCGC 2 cut(s) 634, 636
BstKTI GATC 2 cut(s) 679, 796
BstMAI GTCTC 2 cut(s) 312, 417
BstMBI GATC 2 cut(s) 676, 793
BstMWI GCNNNNNNNGC 6 cut(s) 347, 356, 731, 782, 855, 896
BstNSI RCATGY 1 cut(s) 496
BstUI CGCG 1 cut(s) 634
BstV1I GCAGC 3 cut(s) 328, 522, 870
BstV2I GAAGAC 1 cut(s) 236
BstX2I RGATCY 2 cut(s) 676, 793
BstYI RGATCY 2 cut(s) 676, 793
BstZ17I GTATAC 2 cut(s) 399, 601
BsuRI GGCC 1 cut(s) 278
BtsCI GGATG 2 cut(s) 507, 829
BtsIMutI CAGTG 1 cut(s) 626
BveI ACCTGC 1 cut(s) 350
Cac8I GCNNGC 1 cut(s) 634
CfoI GCGC 2 cut(s) 634, 636
Cfr13I GGNCC 1 cut(s) 650
CseI GACGC 1 cut(s) 399
Csp6I GTAC 2 cut(s) 451, 496
CviAII CATG 2 cut(s) 493, 886
CviQI GTAC 2 cut(s) 451, 496
DdeI CTNAG 2 cut(s) 425, 506
DpnI GATC 2 cut(s) 678, 795
DpnII GATC 2 cut(s) 676, 793
DriI GACNNNNNGTC 1 cut(s) 240
EaeI YGGCCR 1 cut(s) 276
Eam1105I GACNNNNNGTC 1 cut(s) 240
EciI GGCGGA 2 cut(s) 663, 712
Eco130I CCWWGG 1 cut(s) 759
Eco47I GGWCC 1 cut(s) 650
Eco57I CTGAAG 2 cut(s) 270, 437
EcoRI GAATTC 2 cut(s) 163, 557
EcoT14I CCWWGG 1 cut(s) 759
ErhI CCWWGG 1 cut(s) 759
Esp3I CGTCTC 1 cut(s) 417
FaeI CATG 2 cut(s) 496, 889
FatI CATG 2 cut(s) 492, 885
FauNDI CATATG 2 cut(s) 517, 730
FblI GTMKAC 4 cut(s) 372, 398, 511, 600
Fnu4HI GCNGC 3 cut(s) 342, 536, 859
FokI GGATG 2 cut(s) 514, 816
Fsp4HI GCNGC 3 cut(s) 342, 536, 859
GlaI GCGC 2 cut(s) 633, 635
GluI GCNGC 3 cut(s) 342, 536, 859
HaeIII GGCC 1 cut(s) 278
HapII CCGG 1 cut(s) 499
HgaI GACGC 1 cut(s) 399
HhaI GCGC 2 cut(s) 634, 636
Hin1I GRCGYC 1 cut(s) 410
Hin1II CATG 2 cut(s) 496, 889
Hin6I GCGC 2 cut(s) 632, 634
HinP1I GCGC 2 cut(s) 632, 634
HincII GTYRAC 3 cut(s) 298, 512, 698
HindII GTYRAC 3 cut(s) 298, 512, 698
HinfI GANTC 8 cut(s) 20, 50, 188, 210, 241, 272, 473, 716
HpaII CCGG 1 cut(s) 499
HphI GGTGA 2 cut(s) 59, 638
Hpy166II GTNNAC 6 cut(s) 298, 373, 399, 512, 601, 698
Hpy188I TCNGA 6 cut(s) 12, 105, 206, 234, 417, 556
Hpy188III TCNNGA 2 cut(s) 674, 779
Hpy8I GTNNAC 6 cut(s) 298, 373, 399, 512, 601, 698
HpyAV CCTTC 1 cut(s) 331
HpyCH4III ACNGT 3 cut(s) 621, 684, 855
HpyCH4V TGCA 4 cut(s) 264, 770, 858, 920
HpyF10VI GCNNNNNNNGC 6 cut(s) 347, 356, 731, 782, 855, 896
HpyF3I CTNAG 2 cut(s) 425, 506
Hsp92I GRCGYC 1 cut(s) 410
Hsp92II CATG 2 cut(s) 496, 889
HspAI GCGC 2 cut(s) 632, 634
Kzo9I GATC 2 cut(s) 676, 793
LmnI GCTCC 1 cut(s) 641
Lsp1109I GCAGC 3 cut(s) 328, 522, 870
LweI GCATC 2 cut(s) 492, 838
MaeIII GTNAC 3 cut(s) 47, 385, 662
MalI GATC 2 cut(s) 678, 795
MboI GATC 2 cut(s) 676, 793
MboII GAAGA 5 cut(s) 15, 18, 236, 239, 711
MflI RGATCY 2 cut(s) 676, 793
MluCI AATT 5 cut(s) 76, 163, 331, 557, 764
MlyI GAGTC 4 cut(s) 44, 204, 250, 266
MnlI CCTC 8 cut(s) 133, 136, 140, 200, 434, 537, 622, 663
MslI CAYNNNNRTG 1 cut(s) 11
MspA1I CMGCKG 1 cut(s) 861
MspI CCGG 1 cut(s) 499
MvnI CGCG 1 cut(s) 634
MwoI GCNNNNNNNGC 6 cut(s) 347, 356, 731, 782, 855, 896
NdeI CATATG 2 cut(s) 517, 730
NdeII GATC 2 cut(s) 676, 793
NlaIII CATG 2 cut(s) 496, 889
NlaIV GGNNCC 1 cut(s) 151
NmeAIII GCCGAG 1 cut(s) 254
NmuCI GTSAC 2 cut(s) 47, 662
NspI RCATGY 1 cut(s) 496
NspV TTCGAA 1 cut(s) 167
PaqCI CACCTGC 1 cut(s) 350
PauI GCGCGC 1 cut(s) 632
PciI ACATGT 1 cut(s) 492
PfeI GAWTC 4 cut(s) 20, 188, 473, 716
PkrI GCNGC 3 cut(s) 343, 537, 860
PleI GAGTC 4 cut(s) 44, 204, 249, 266
PpsI GAGTC 4 cut(s) 44, 204, 249, 266
PscI ACATGT 1 cut(s) 492
PspN4I GGNNCC 1 cut(s) 151
PspPI GGNCC 1 cut(s) 650
PsuI RGATCY 2 cut(s) 676, 793
PteI GCGCGC 1 cut(s) 632
PvuII CAGCTG 1 cut(s) 861
RsaI GTAC 2 cut(s) 452, 497
RsaNI GTAC 2 cut(s) 451, 496
RseI CAYNNNNRTG 1 cut(s) 11
SalI GTCGAC 1 cut(s) 510
SatI GCNGC 3 cut(s) 342, 536, 859
Sau3AI GATC 2 cut(s) 676, 793
Sau96I GGNCC 1 cut(s) 650
SchI GAGTC 4 cut(s) 44, 204, 250, 266
SfaNI GCATC 2 cut(s) 492, 838
SfuI TTCGAA 1 cut(s) 167
SinI GGWCC 1 cut(s) 650
SmiMI CAYNNNNRTG 1 cut(s) 11
SmlI CTYRAG 1 cut(s) 137
SmoI CTYRAG 1 cut(s) 137
Sse9I AATT 5 cut(s) 76, 163, 331, 557, 764
SsiI CCGC 2 cut(s) 648, 723
StyI CCWWGG 1 cut(s) 759
TaaI ACNGT 3 cut(s) 621, 684, 855
TaqI TCGA 2 cut(s) 167, 511
TaqII GACCGA 1 cut(s) 32
TasI AATT 5 cut(s) 76, 163, 331, 557, 764
TatI WGTACW 1 cut(s) 450
TfiI GAWTC 4 cut(s) 20, 188, 473, 716
TscAI CASTG 1 cut(s) 626
TseFI GTSAC 2 cut(s) 47, 662
TseI GCWGC 3 cut(s) 341, 535, 858
Tsp45I GTSAC 2 cut(s) 47, 662
TspDTI ATGAA 3 cut(s) 17, 339, 923
TspGWI ACGGA 1 cut(s) 805
TspRI CASTG 1 cut(s) 626
VpaK11BI GGWCC 1 cut(s) 650
XapI RAATTY 4 cut(s) 163, 331, 557, 764
XceI RCATGY 1 cut(s) 496
XmiI GTMKAC 4 cut(s) 372, 398, 511, 600
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.