Rroxscaffold_4G00276880

Amino-acid acetyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0002453
Physical Location & Seq
Reverse (-)
323304 .. 333325
10022 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00276880.1

Sequence Viewer

Length: 2793 bp
ATGACCGCCACCTTCCGCTCCACCCACTACCGCGTCACTTCCACCGCTGCCCACTCGCCCTCGCTTCGCCGCTTTTCCCCCACCGCAACCGCTATGCCCTCCCGGCTGGCGATGGTAAATAGTCAGCCGGCGAAGGGCAGAATTGGAATGTCGCACAAGGCCAATGCTGCTGCGTTTGGGCCGGTGATGGATGACAGCGAGAGTGACGGCGAGAACTATAACTCGATGGAGGACGAGCTGTTCGTGCGGTGGTTCCGGGAGGCTTGGCCGTACCTCTGGGCCCACCGCGGCGCCACTTTCGTTGTGATCATCTCCGGCGAAATTGTGAACGACCCTCATCACTTGGACCCTATTCTAAAGGATATTGCTTTTCTTCATCACCTGGGGATCAAGTTTGTTCTTGTTCCAGGGATCCATGTTGAAATCGATACCCTTTTGGCTCAGAGAAGCAAGAGTCCAAAGTTTGCTGGTCAGTATAGAGTGACTGACTCGGATTCTCTAACAGCTGCAAAGGAAGCTGCTGGGAAGATTTCTATGGATATAGAGGCAAAGCTTTCACCCGGACCCTCCATATGCAATATTCGTCGGCATGGTGATAGTAGTCGTTGGCATGAAGTTGGCGTCAGTGTAGCTAGTGGTAACTTTCTTGCAGCCAAGAGGAGAGGAGTCGTTGCCGGTGTTGATTATGGGGCAACAGGTGAAGTTAAGAAAGTGGATGCGGTTCGCATGCGGGAGAGGCTTGATGCGGGTTGTATTGTGCTATTGAGCAACCTTGGTTATTCGAGCTCTGGAGAAGTTTTAAATTGCAACACATATGAAGTTGCAACAGCTTGTTCCTTGGCTATTGGAGCAGATAAGCTTATCTGCATAATGGATGGTCCAATTCTTGATGAGAGTGGACGTCTGATTCGTTTCTTGACTCTTGAAGAAGCAGACAAGTTGATTCGTCAGCGGGCTAAGCAAAGTGAAATAGCCGCTAGCTATGTGAAAGCTGTTGATGAAGAAAATCTCCATTATCTTGGACATGATAGTGGGAATTTTCTTAAGGAAAAGCATATTCCAAGGTTTAACAATGGTGTTGGTTTTGAGAATGGCAATGGATTGTGGTCTGGTGAACAAGGTTTTGCAATAGGGGGTCACGAGCGCCAAAGTCGATTAAGCGGTTACCTTTCAGAATTGGCTGCTGCAGCCTTTGTTTGTAGGGGAGGTGTTCAAAGAGTTCATCTGTTAGATGGCACTAAAGGGGGAGTATTGTTGTTGGAATTATTTAAAAGAGACGGAATGGGGACTATGGTGGCAAGTGACGTTTATGAAGGAACCCGGATGGCTAGGGTGTCGGACCTCTCTGGAATAAGACAAATCATACAACCTTTAGAAGCAGCTGGCACATTGGTTATGAGAACTGACGAAGAGCTACTTGAAGCATTGGATTCTTATGTTGTTGTCGAAAGAGAAGGTCAAATTATTGCATGTGCTGCTCTTTTTCCTTTCCAAGAGGAGAAATGTGCAGAGGTGGCTGCTATTGCAGTTTCTCCGGATTGCCGTGGACAAGGACAAGGAGATAAATTGCTTGATTACATGGAGAAGAAGGCAGCTTCTCTTGGATTGGAAAAGCTTTTCTTGCTAACAACCCGAACTGCAGATTGGTTTAAGAGACGTGGATTTTCTGAATGTTCAATTGAATCAATACCAGAGAAGCGGAGGGAAAAGATTAATCTGTCCCGTAGATCCAAGTATTATATGAAGCAGCTGTTACCTGATACTAGCGGAATTACTGTTGATAGGGTGTCTCAGCAACCAAACCGAGCTGACGACGACGACGACATGCCCGGCGCTCAGTCCGTCTCGATGAGCGGCAGTATGGGCTCGCCGTCCAGCCGCAGCGAGCAGACCCCCGCCGGCGACAATTCTTCTCTCCGATTGAATCATCCCGACGTTAACGGCGACGATGCTGGCTCCGTTGGCAAAAAGAAGAAGAGAGGTCAACGGGCTGCAGGAGGCGATAAGAATGGAAGAGGACTGCGCCAATTTAGCATGAAAGTGTGCGAGAAAGTGGAGAGCAAGGGAAGAACCACTTATAACGAGGTTGCAGATGAACTTGTAGCAGAGTTTTCTGACCCTGTCAATGGTGTTACATCTCCTGATCAGCAACAATATGATGAGAAGAACATCAGGCGGAGGGTATATGATGCCCTGAATGTTCTAATGGCAATGGATATTATATCCAAGGATAAAAAGGAAATACAATGGAAGGGTCTGCCTCGAACCAGCCTGAATGATATTGAAGAACTGAAGACTGAGCGCCTAGGACTAAGGAGTAGGATTGAAAAGAAAGCTGTCTATCTGCAAGAACTAGAGGAACAATATGTAGGTCTTCAAAACCTGATACAACGAAATGAGCAATTATACTGCTCTGGAGATGCTCCCAGTGGGGGTGTGTCTTTACCTTTCATTCTTGTGCAGACTCGCCCCCATGCAACTGTTGAGGTGGAAATATCAGAGGATATGCAACTGGTGCATTTTGACTTCAATAGCACCCCATTTGAGCTTCATGATGATAACTATGTCTTAAAGGCAATGAAATTCTGTGAAAGGTCGCAGGGTGATGGTAATCATGGTATGACACAAAACTACGTTGCAGATGGAGGAGAAGGGTCTAGCATGGCAGCCATGTATCAACAGCAGATCCCTCCGCAGATCCCTCTTCCTCCAATGGTGAACACACCTGTCAGGCCTCCCACCTCACCACCTCTTCCGGGAATAATAAAAGCACGCGTGAAGCATGAGCATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00220 ko01100 ko01110 ko01130 ko01210 ko01230 map00220 map01100 map01110 map01130 map01210 map01230
Pfam Domains
Protein Families
AA_kinase Acetyltransf_1

Protein Analysis

930

Amino Acids

102.44

Weight (kDa)

6.2

Isoelectric Point (pI)

48.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AA_kinase PF00696 99 - 321 4e-12 Amino acid kinase family
Acetyltransf_1 PF00583 475 - 555 1.4e-14 Acetyltransferase (GNAT) family
Acetyltransf_7 PF13508 478 - 557 5.1e-13 Acetyltransferase (GNAT) domain
IDM1_C PF23209 479 - 565 1.6e-07 Increased DNA methylation 1, C-terminal domain
WHD_E2F_TDP PF02319 672 - 752 1.4e-18 E2F/DP family winged-helix DNA-binding domain
DP PF08781 760 - 873 3.9e-37 Transcription factor DP
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2079
AatII GACGTC 1 cut(s) 904
AccB1I GGYRCC 1 cut(s) 290
AccBSI CCGCTC 2 cut(s) 18, 1854
AccII CGCG 3 cut(s) 33, 288, 2775
AccIII TCCGGA 1 cut(s) 1534
AclWI GGATC 6 cut(s) 395, 406, 419, 1722, 2680, 2692
AcoI YGGCCR 1 cut(s) 266
AcsI RAATTY 2 cut(s) 1036, 2582
AcuI CTGAAG 1 cut(s) 2312
AcyI GRCGYC 3 cut(s) 291, 621, 901
AfaI GTAC 1 cut(s) 272
AfiI CCNNNNNNNGG 4 cut(s) 134, 2126, 2432, 2756
AflII CTTAAG 1 cut(s) 1043
AflIII ACRYGT 1 cut(s) 2773
AjiI CACGTC 1 cut(s) 1658
AjnI CCWGG 2 cut(s) 381, 406
AjuI GAANNNNNNNTTGG 2 cut(s) 1627, 1659
AloI GAACNNNNNNTCC 2 cut(s) 224, 256
Alw21I GWGCWC 1 cut(s) 788
Alw26I GTCTC 4 cut(s) 1269, 1648, 1794, 1849
AlwI GGATC 6 cut(s) 395, 406, 419, 1722, 2680, 2692
Aor13HI TCCGGA 1 cut(s) 1534
AoxI GGCC 5 cut(s) 159, 179, 266, 279, 2732
ApaI GGGCCC 1 cut(s) 283
ApoI RAATTY 2 cut(s) 1036, 2582
ArsI GACNNNNNNTTYG 4 cut(s) 224, 256, 891, 923
AseI ATTAAT 1 cut(s) 1713
AspA2I CCTAGG 1 cut(s) 2305
AspLEI GCGC 5 cut(s) 293, 1146, 1835, 2025, 2304
AspS9I GGNCC 7 cut(s) 179, 279, 280, 346, 563, 878, 1339
AsuC2I CCSGG 6 cut(s) 103, 257, 561, 1321, 1830, 2757
AsuHPI GGTGA 9 cut(s) 196, 371, 549, 605, 710, 1124, 2615, 2728, 2736
AsuNHI GCTAGC 1 cut(s) 977
AvaII GGWCC 4 cut(s) 346, 563, 878, 1339
AvrII CCTAGG 1 cut(s) 2305
BaeGI GKGCMC 1 cut(s) 283
BamHI GGATCC 1 cut(s) 411
BanI GGYRCC 1 cut(s) 290
BanII GRGCYC 3 cut(s) 283, 788, 1868
BauI CACGAG 1 cut(s) 1139
BbsI GAAGAC 2 cut(s) 2300, 2366
Bbv12I GWGCWC 1 cut(s) 788
BccI CCATC 8 cut(s) 106, 181, 220, 869, 1226, 1318, 2600, 2636
BceAI ACGGC 5 cut(s) 223, 253, 1527, 1855, 1957
BciT130I CCWGG 2 cut(s) 383, 408
BclI TGATCA 2 cut(s) 306, 2143
BcnI CCSGG 6 cut(s) 103, 257, 561, 1321, 1830, 2757
BcoDI GTCTC 4 cut(s) 1269, 1648, 1794, 1849
BfaI CTAG 7 cut(s) 633, 978, 1329, 1764, 2306, 2354, 2658
BfmI CTRYAG 3 cut(s) 1185, 1638, 1992
BfoI RGCGCY 4 cut(s) 294, 1147, 1836, 2305
BfrI CTTAAG 1 cut(s) 1043
BglI GCCNNNNNGGC 1 cut(s) 103
BlnI CCTAGG 1 cut(s) 2305
BlpI GCTNAGC 1 cut(s) 957
Bme1390I CCNGG 8 cut(s) 103, 257, 383, 408, 561, 1321, 1830, 2757
Bme18I GGWCC 4 cut(s) 346, 563, 878, 1339
BmgBI CACGTC 1 cut(s) 1658
BmgT120I GGNCC 7 cut(s) 179, 279, 280, 346, 563, 878, 1339
BmiI GGNNCC 8 cut(s) 254, 281, 292, 348, 413, 565, 1318, 1957
BmrFI CCNGG 8 cut(s) 103, 257, 383, 408, 561, 1321, 1830, 2757
BmrI ACTGGG 1 cut(s) 2421
BmsI GCATC 5 cut(s) 706, 733, 1939, 2179, 2410
BmtI GCTAGC 1 cut(s) 981
BmuI ACTGGG 1 cut(s) 2421
BpiI GAAGAC 2 cut(s) 2300, 2366
BpmI CTGGAG 2 cut(s) 810, 2436
Bpu1102I GCTNAGC 1 cut(s) 957
BpuMI CCSGG 6 cut(s) 103, 257, 561, 1321, 1830, 2757
Bsa29I ATCGAT 1 cut(s) 426
BsaBI GATNNNNATC 1 cut(s) 2610
BsaHI GRCGYC 3 cut(s) 291, 621, 901
BsaJI CCNNGG 9 cut(s) 286, 382, 407, 772, 837, 1061, 1543, 2226, 2305
BsaWI WCCGGW 1 cut(s) 1534
Bsc4I CCNNNNNNNGG 4 cut(s) 134, 2126, 2432, 2756
Bse118I RCCGGY 4 cut(s) 127, 181, 674, 1898
Bse1I ACTGG 2 cut(s) 2427, 2517
Bse3DI GCAATG 3 cut(s) 1102, 2217, 2583
Bse8I GATNNNNATC 1 cut(s) 2610
BseAI TCCGGA 1 cut(s) 1534
BseBI CCWGG 2 cut(s) 383, 408
BseCI ATCGAT 1 cut(s) 426
BseDI CCNNGG 9 cut(s) 286, 382, 407, 772, 837, 1061, 1543, 2226, 2305
BseGI GGATG 5 cut(s) 196, 721, 880, 1329, 1927
BseJI GATNNNNATC 1 cut(s) 2610
BseLI CCNNNNNNNGG 4 cut(s) 134, 2126, 2432, 2756
BseMI GCAATG 3 cut(s) 1102, 2217, 2583
BseMII CTCAG 4 cut(s) 455, 1805, 1850, 2289
BseNI ACTGG 2 cut(s) 2427, 2517
BseRI GAGGAG 4 cut(s) 673, 678, 1511, 2661
BseSI GKGCMC 1 cut(s) 283
BseYI CCCAGC 1 cut(s) 521
BsgI GTGCAG 2 cut(s) 1527, 2480
Bsh1236I CGCG 3 cut(s) 33, 288, 2775
BshFI GGCC 5 cut(s) 161, 181, 268, 281, 2734
BshNI GGYRCC 1 cut(s) 290
BshVI ATCGAT 1 cut(s) 426
BsiHKAI GWGCWC 1 cut(s) 788
BslFI GGGAC 2 cut(s) 1300, 1705
BslI CCNNNNNNNGG 4 cut(s) 134, 2126, 2432, 2756
BsmAI GTCTC 4 cut(s) 1269, 1648, 1794, 1849
BsmBI CGTCTC 3 cut(s) 1269, 1648, 1849
BsmFI GGGAC 2 cut(s) 1300, 1705
BsnI GGCC 5 cut(s) 161, 181, 268, 281, 2734
Bsp120I GGGCCC 1 cut(s) 279
Bsp1286I GDGCHC 3 cut(s) 283, 788, 1868
Bsp13I TCCGGA 1 cut(s) 1534
Bsp143I GATC 7 cut(s) 306, 387, 411, 1727, 2143, 2685, 2697
Bsp1720I GCTNAGC 1 cut(s) 957
BspANI GGCC 5 cut(s) 161, 181, 268, 281, 2734
BspCNI CTCAG 4 cut(s) 454, 1804, 1849, 2290
BspDI ATCGAT 1 cut(s) 426
BspEI TCCGGA 1 cut(s) 1534
BspFNI CGCG 3 cut(s) 33, 288, 2775
BspHI TCATGA 1 cut(s) 2551
BspLI GGNNCC 8 cut(s) 254, 281, 292, 348, 413, 565, 1318, 1957
BspMAI CTGCAG 3 cut(s) 1189, 1642, 1996
BspOI GCTAGC 1 cut(s) 981
BspPI GGATC 6 cut(s) 395, 406, 419, 1722, 2680, 2692
BspQI GCTCTTC 1 cut(s) 1404
BspT107I GGYRCC 1 cut(s) 290
BspTI CTTAAG 1 cut(s) 1043
BsrBI CCGCTC 2 cut(s) 18, 1854
BsrDI GCAATG 3 cut(s) 1102, 2217, 2583
BsrFI RCCGGY 4 cut(s) 127, 181, 674, 1898
BsrI ACTGG 2 cut(s) 2427, 2517
BssAI RCCGGY 4 cut(s) 127, 181, 674, 1898
BssECI CCNNGG 9 cut(s) 286, 382, 407, 772, 837, 1061, 1543, 2226, 2305
BssMI GATC 7 cut(s) 306, 387, 411, 1727, 2143, 2685, 2697
BssNI GRCGYC 3 cut(s) 291, 621, 901
BssSI CACGAG 1 cut(s) 1139
BssT1I CCWWGG 5 cut(s) 772, 837, 1061, 2226, 2305
Bst2BI CACGAG 1 cut(s) 1139
Bst2UI CCWGG 2 cut(s) 383, 408
Bst4CI ACNGT 2 cut(s) 1777, 2482
Bst6I CTCTTC 5 cut(s) 1404, 1970, 2008, 2709, 2757
BstACI GRCGYC 3 cut(s) 291, 621, 901
BstAFI CTTAAG 1 cut(s) 1043
BstAPI GCANNNNNTGC 2 cut(s) 1475, 2515
BstDEI CTNAG 6 cut(s) 441, 957, 1791, 1836, 2298, 2312
BstDSI CCRYGG 2 cut(s) 286, 1543
BstEII GGTNACC 1 cut(s) 1163
BstF5I GGATG 5 cut(s) 196, 721, 880, 1329, 1927
BstFNI CGCG 3 cut(s) 33, 288, 2775
BstH2I RGCGCY 4 cut(s) 294, 1147, 1836, 2305
BstHHI GCGC 5 cut(s) 293, 1146, 1835, 2025, 2304
BstKTI GATC 7 cut(s) 309, 390, 414, 1730, 2146, 2688, 2700
BstMAI GTCTC 4 cut(s) 1269, 1648, 1794, 1849
BstMBI GATC 7 cut(s) 306, 387, 411, 1727, 2143, 2685, 2697
BstNI CCWGG 2 cut(s) 383, 408
BstNSI RCATGY 3 cut(s) 730, 1473, 1828
BstPI GGTNACC 1 cut(s) 1163
BstSCI CCNGG 8 cut(s) 101, 255, 381, 406, 559, 1319, 1828, 2755
BstSFI CTRYAG 3 cut(s) 1185, 1638, 1992
BstSLI GKGCMC 1 cut(s) 283
BstUI CGCG 3 cut(s) 33, 288, 2775
BstV2I GAAGAC 2 cut(s) 2300, 2366
BstX2I RGATCY 4 cut(s) 411, 1727, 2685, 2697
BstXI CCANNNNNNTGG 1 cut(s) 1019
BstYI RGATCY 4 cut(s) 411, 1727, 2685, 2697
Bsu15I ATCGAT 1 cut(s) 426
BsuRI GGCC 5 cut(s) 161, 181, 268, 281, 2734
BsuTUI ATCGAT 1 cut(s) 426
BtgI CCRYGG 2 cut(s) 286, 1543
BtgZI GCGATG 1 cut(s) 125
BtrI CACGTC 1 cut(s) 1658
BtsCI GGATG 5 cut(s) 196, 721, 880, 1329, 1927
BtsIMutI CAGTG 2 cut(s) 631, 2434
CciI TCATGA 1 cut(s) 2551
CfoI GCGC 5 cut(s) 293, 1146, 1835, 2025, 2304
Cfr10I RCCGGY 4 cut(s) 127, 181, 674, 1898
Cfr13I GGNCC 7 cut(s) 179, 279, 280, 346, 563, 878, 1339
Cfr42I CCGCGG 1 cut(s) 289
ClaI ATCGAT 1 cut(s) 426
CseI GACGC 2 cut(s) 22, 610
Csp6I GTAC 1 cut(s) 271
CspCI CAANNNNNGTGG 2 cut(s) 283, 318
CviQI GTAC 1 cut(s) 271
DdeI CTNAG 6 cut(s) 441, 957, 1791, 1836, 2298, 2312
DinI GGCGCC 1 cut(s) 292
DpnI GATC 7 cut(s) 308, 389, 413, 1729, 2145, 2687, 2699
DpnII GATC 7 cut(s) 306, 387, 411, 1727, 2143, 2685, 2697
DraI TTTAAA 2 cut(s) 801, 1270
EaeI YGGCCR 1 cut(s) 266
Eam1104I CTCTTC 5 cut(s) 1404, 1970, 2008, 2709, 2757
EarI CTCTTC 5 cut(s) 1404, 1970, 2008, 2709, 2757
EciI GGCGGA 1 cut(s) 2191
Ecl136II GAGCTC 1 cut(s) 786
Eco130I CCWWGG 5 cut(s) 772, 837, 1061, 2226, 2305
Eco147I AGGCCT 1 cut(s) 2734
Eco24I GRGCYC 3 cut(s) 283, 788, 1868
Eco47I GGWCC 4 cut(s) 346, 563, 878, 1339
Eco53kI GAGCTC 1 cut(s) 786
Eco57I CTGAAG 1 cut(s) 2312
Eco91I GGTNACC 1 cut(s) 1163
EcoICRI GAGCTC 1 cut(s) 786
EcoO65I GGTNACC 1 cut(s) 1163
EcoRII CCWGG 2 cut(s) 381, 406
EcoT14I CCWWGG 5 cut(s) 772, 837, 1061, 2226, 2305
EcoT38I GRGCYC 3 cut(s) 283, 788, 1868
EgeI GGCGCC 1 cut(s) 292
EheI GGCGCC 1 cut(s) 292
ErhI CCWWGG 5 cut(s) 772, 837, 1061, 2226, 2305
Esp3I CGTCTC 3 cut(s) 1269, 1648, 1849
FalI AAGNNNNNCTT 6 cut(s) 1401, 1433, 1604, 1636, 2059, 2091
FaqI GGGAC 2 cut(s) 1300, 1705
FauI CCCGC 4 cut(s) 723, 739, 945, 1903
FauNDI CATATG 2 cut(s) 572, 814
FbaI TGATCA 2 cut(s) 306, 2143
FokI GGATG 5 cut(s) 203, 728, 887, 1336, 1914
FriOI GRGCYC 3 cut(s) 283, 788, 1868
FspBI CTAG 7 cut(s) 633, 978, 1329, 1764, 2306, 2354, 2658
GlaI GCGC 5 cut(s) 292, 1145, 1834, 2024, 2303
GsaI CCCAGC 1 cut(s) 525
GsuI CTGGAG 2 cut(s) 810, 2436
HaeII RGCGCY 4 cut(s) 294, 1147, 1836, 2305
HaeIII GGCC 5 cut(s) 161, 181, 268, 281, 2734
HgaI GACGC 2 cut(s) 22, 610
HhaI GCGC 5 cut(s) 293, 1146, 1835, 2025, 2304
Hin1I GRCGYC 3 cut(s) 291, 621, 901
Hin6I GCGC 5 cut(s) 291, 1144, 1833, 2023, 2302
HinP1I GCGC 5 cut(s) 291, 1144, 1833, 2023, 2302
HincII GTYRAC 2 cut(s) 1939, 1985
HindII GTYRAC 2 cut(s) 1939, 1985
HindIII AAGCTT 3 cut(s) 551, 857, 1613
HpaI GTTAAC 1 cut(s) 1939
HphI GGTGA 9 cut(s) 196, 371, 549, 605, 710, 1124, 2615, 2728, 2736
Hpy166II GTNNAC 7 cut(s) 328, 899, 1115, 1547, 1939, 1985, 2719
Hpy188I TCNGA 9 cut(s) 444, 493, 906, 1174, 1339, 1669, 1919, 2116, 2500
Hpy8I GTNNAC 7 cut(s) 328, 899, 1115, 1547, 1939, 1985, 2719
Hpy99I CGWCG 6 cut(s) 588, 1817, 1820, 1823, 1937, 1949
HpyAV CCTTC 7 cut(s) 22, 127, 1307, 1448, 1582, 2245, 2645
HpyCH4III ACNGT 2 cut(s) 1777, 2482
HpyCH4IV ACGT 5 cut(s) 901, 1305, 1657, 1935, 2634
HpyF3I CTNAG 6 cut(s) 441, 957, 1791, 1836, 2298, 2312
HpySE526I ACGT 5 cut(s) 901, 1305, 1657, 1935, 2634
Hsp92I GRCGYC 3 cut(s) 291, 621, 901
HspAI GCGC 5 cut(s) 291, 1144, 1833, 2023, 2302
KasI GGCGCC 1 cut(s) 290
Kpn2I TCCGGA 1 cut(s) 1534
KroI GCCGGC 2 cut(s) 127, 1898
KroNI GCCGGC 2 cut(s) 129, 1900
Ksp22I TGATCA 2 cut(s) 306, 2143
KspAI GTTAAC 1 cut(s) 1939
KspI CCGCGG 1 cut(s) 289
Kzo9I GATC 7 cut(s) 306, 387, 411, 1727, 2143, 2685, 2697
LguI GCTCTTC 1 cut(s) 1404
LmnI GCTCC 4 cut(s) 23, 848, 1961, 2428
LweI GCATC 5 cut(s) 706, 733, 1939, 2179, 2410
MaeI CTAG 7 cut(s) 633, 978, 1329, 1764, 2306, 2354, 2658
MaeII ACGT 5 cut(s) 901, 1305, 1657, 1935, 2634
MaeIII GTNAC 9 cut(s) 34, 203, 481, 638, 1136, 1163, 1301, 1752, 2131
MalI GATC 7 cut(s) 308, 389, 413, 1729, 2145, 2687, 2699
MbiI CCGCTC 2 cut(s) 18, 1854
MboI GATC 7 cut(s) 306, 387, 411, 1727, 2143, 2685, 2697
MfeI CAATTG 1 cut(s) 1677
MflI RGATCY 4 cut(s) 411, 1727, 2685, 2697
MhlI GDGCHC 3 cut(s) 283, 788, 1868
MluI ACGCGT 1 cut(s) 2773
Mly113I GGCGCC 1 cut(s) 291
MlyI GAGTC 5 cut(s) 463, 482, 675, 913, 2458
MmeI TCCRAC 2 cut(s) 1239, 1317
MreI CGCCGGCG 1 cut(s) 1898
MroI TCCGGA 1 cut(s) 1534
MroNI GCCGGC 2 cut(s) 127, 1898
MslI CAYNNNNRTG 3 cut(s) 1029, 2039, 2456
MspA1I CMGCKG 6 cut(s) 47, 288, 506, 952, 1382, 1750
MspCI CTTAAG 1 cut(s) 1043
MspR9I CCNGG 8 cut(s) 103, 257, 383, 408, 561, 1321, 1830, 2757
MunI CAATTG 1 cut(s) 1677
MvaI CCWGG 2 cut(s) 383, 408
MvnI CGCG 3 cut(s) 33, 288, 2775
NaeI GCCGGC 2 cut(s) 129, 1900
NarI GGCGCC 1 cut(s) 291
NciI CCSGG 6 cut(s) 103, 257, 561, 1321, 1830, 2757
NdeI CATATG 2 cut(s) 572, 814
NdeII GATC 7 cut(s) 306, 387, 411, 1727, 2143, 2685, 2697
NgoMIV GCCGGC 2 cut(s) 127, 1898
NheI GCTAGC 1 cut(s) 977
NlaIV GGNNCC 8 cut(s) 254, 281, 292, 348, 413, 565, 1318, 1957
NmuCI GTSAC 5 cut(s) 34, 203, 481, 1136, 1301
NspI RCATGY 3 cut(s) 730, 1473, 1828
PaeI GCATGC 1 cut(s) 730
PagI TCATGA 1 cut(s) 2551
PceI AGGCCT 1 cut(s) 2734
PciSI GCTCTTC 1 cut(s) 1404
PcsI WCGNNNNNNNCGW 4 cut(s) 240, 907, 1818, 1941
PdiI GCCGGC 2 cut(s) 129, 1900
PfeI GAWTC 6 cut(s) 494, 907, 943, 1430, 1682, 1924
PflFI GACNNNGTC 1 cut(s) 2120
PfoI TCCNGGA 2 cut(s) 255, 2755
PleI GAGTC 5 cut(s) 462, 482, 674, 913, 2458
PluTI GGCGCC 1 cut(s) 294
PpsI GAGTC 5 cut(s) 462, 482, 674, 913, 2458
PshBI ATTAAT 1 cut(s) 1713
PsiI TTATAA 1 cut(s) 2079
Psp124BI GAGCTC 1 cut(s) 788
Psp6I CCWGG 2 cut(s) 381, 406
PspEI GGTNACC 1 cut(s) 1163
PspFI CCCAGC 1 cut(s) 521
PspGI CCWGG 2 cut(s) 381, 406
PspN4I GGNNCC 8 cut(s) 254, 281, 292, 348, 413, 565, 1318, 1957
PspOMI GGGCCC 1 cut(s) 279
PspPI GGNCC 7 cut(s) 179, 279, 280, 346, 563, 878, 1339
PstI CTGCAG 3 cut(s) 1189, 1642, 1996
PsuI RGATCY 4 cut(s) 411, 1727, 2685, 2697
PsyI GACNNNGTC 1 cut(s) 2120
PvuII CAGCTG 3 cut(s) 506, 1382, 1750
RsaI GTAC 1 cut(s) 272
RsaNI GTAC 1 cut(s) 271
RseI CAYNNNNRTG 3 cut(s) 1029, 2039, 2456
SacI GAGCTC 1 cut(s) 788
SacII CCGCGG 1 cut(s) 289
SapI GCTCTTC 1 cut(s) 1404
Sau3AI GATC 7 cut(s) 306, 387, 411, 1727, 2143, 2685, 2697
Sau96I GGNCC 7 cut(s) 179, 279, 280, 346, 563, 878, 1339
SchI GAGTC 5 cut(s) 463, 482, 675, 913, 2458
ScrFI CCNGG 8 cut(s) 103, 257, 383, 408, 561, 1321, 1830, 2757
SduI GDGCHC 3 cut(s) 283, 788, 1868
SfaNI GCATC 5 cut(s) 706, 733, 1939, 2179, 2410
SfcI CTRYAG 3 cut(s) 1185, 1638, 1992
SfoI GGCGCC 1 cut(s) 292
Sfr303I CCGCGG 1 cut(s) 289
SgrAI CRCCGGYG 1 cut(s) 1898
SgrBI CCGCGG 1 cut(s) 289
SinI GGWCC 4 cut(s) 346, 563, 878, 1339
SmiMI CAYNNNNRTG 3 cut(s) 1029, 2039, 2456
SmlI CTYRAG 1 cut(s) 1043
SmoI CTYRAG 1 cut(s) 1043
SphI GCATGC 1 cut(s) 730
SseBI AGGCCT 1 cut(s) 2734
SspDI GGCGCC 1 cut(s) 290
SspI AATATT 1 cut(s) 580
SspMI CTAG 7 cut(s) 633, 978, 1329, 1764, 2306, 2354, 2658
SstI GAGCTC 1 cut(s) 788
StuI AGGCCT 1 cut(s) 2734
StyD4I CCNGG 8 cut(s) 101, 255, 381, 406, 559, 1319, 1828, 2755
StyI CCWWGG 5 cut(s) 772, 837, 1061, 2226, 2305
TaaI ACNGT 2 cut(s) 1777, 2482
TaiI ACGT 5 cut(s) 904, 1308, 1660, 1938, 2637
TaqI TCGA 7 cut(s) 224, 426, 782, 1153, 1446, 1847, 2263
TauI GCSGC 5 cut(s) 72, 291, 977, 1857, 1881
TfiI GAWTC 6 cut(s) 494, 907, 943, 1430, 1682, 1924
TscAI CASTG 2 cut(s) 631, 2434
TseFI GTSAC 5 cut(s) 34, 203, 481, 1136, 1301
Tsp45I GTSAC 5 cut(s) 34, 203, 481, 1136, 1301
TspGWI ACGGA 3 cut(s) 1293, 1831, 1948
TspRI CASTG 2 cut(s) 631, 2434
Tth111I GACNNNGTC 1 cut(s) 2120
Vha464I CTTAAG 1 cut(s) 1043
VpaK11BI GGWCC 4 cut(s) 346, 563, 878, 1339
VspI ATTAAT 1 cut(s) 1713
XapI RAATTY 2 cut(s) 1036, 2582
XceI RCATGY 3 cut(s) 730, 1473, 1828
XmaJI CCTAGG 1 cut(s) 2305
XspI CTAG 7 cut(s) 633, 978, 1329, 1764, 2306, 2354, 2658
ZraI GACGTC 1 cut(s) 902
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.