Rw4G017360

Amino-acid acetyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
OG0002453
Physical Location & Seq
Reverse (-)
39034947 .. 39037978
3032 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G017360.1

Sequence Viewer

Length: 1092 bp
ATGGGCAAGACGGCCTCTGTGCCGAACATCATACAAAAAGGAGTTTCGCCGGTGGCGGAGGTTGGAGTTGTTCGGATGGCCCACAGGACCTCTGGGAGCTTTTCCGCCCATAAACCCTTGGCGTTGTCGAGCTTCTTTTTTAACAACTTTTTGATTATCTTGTTCGCTGCTTCGACCTGGCCGTTGGTCTGGGGGTGGGCGACAGATGCAAAACTTAACTTAGTGCCCAAGTTGGCGGTAAAGGAGATGAGTTCCTCATTGTTGAACTGTGTGCCGTTGTCTGATATTGCTTTTCTTCATCACCTGGGGATCAAGTTTGTTCTTGTTCCAGGGACCCATGTCGAAATCGATACCCTTTTGGCTCAGAGAAGCAAGAGTCCAAAGTTTGCTGGTCAGTATAGAGTGACCGACTCGGATTCTCTAACAGCTGCAAAGGAAGCTGCTGGGAAGATTTCCATGGATATAGAGGCAAAGCTTTCGCCCGGACCGTCGATATGCAATATTCGTCGGCATGGTGACAGTAGTCGTTGGCATGAAGTTGGCGTCAGTGTAGCTAGTGGTAACTTTCTTGCAGCCAGGAGGAGAGGAGTCGTTGCTGGTGTTGATTATGGGGCAACAGGTGAAGTTAAGAAAGTGGATGTAGTTCGCATGCGAGAGAGGCTTGATGCGGGTTGTATTGTGCTATTGAGCAACCTTGGTTATTCGAGCGCTGGAGAAGTTTTAAATTGCAACACATATGAAGTTGCAACAGCTTGTTCCTTGGCTATTGGAGCAGATAAGCTTATCTGCATAATGGATGGTCCAATTCTTGATGAGAGTGGACGTCTGATTCGTTTCTTGACTCTTGAAGAAGCAGACAAGTTGATTCGTCAGCGGGCTAAGCAAAGTGAAATAGCCGCTAGCTATGTGAAAGCTGTTGATGAAGAAAATCTCCATTATCTTGGACATGATAGTGGGAATTTTCTTAAGGAAAAGCATATTCCAAGGTTTAACAATGGTGTTGGTTTTGAGAATGGCAATGGATTGTGTCGATTAAGCGGTTACCTTTCAGAATTGGCTGCCGCAGCCTTTGTTTGCAGGGTAAGACCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00220 ko01100 ko01110 ko01130 ko01210 ko01230 map00220 map01100 map01110 map01130 map01210 map01230
Pfam Domains
Protein Families
AA_kinase Acetyltransf_1

Protein Analysis

363

Amino Acids

39.2

Weight (kDa)

8.84

Isoelectric Point (pI)

32.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AA_kinase PF00696 94 - 295 2.4e-09 Amino acid kinase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 826
AciI CCGC 8 cut(s) 56, 105, 236, 668, 874, 897, 1038, 1062
AclWI GGATC 1 cut(s) 317
AcoI YGGCCR 1 cut(s) 179
AcsI RAATTY 1 cut(s) 958
AcyI GRCGYC 2 cut(s) 543, 823
AfeI AGCGCT 1 cut(s) 709
AflII CTTAAG 1 cut(s) 965
AgsI TTSAA 2 cut(s) 265, 848
AjnI CCWGG 4 cut(s) 176, 303, 328, 575
AlwI GGATC 1 cut(s) 317
Aor51HI AGCGCT 1 cut(s) 709
AoxI GGCC 3 cut(s) 12, 78, 179
ApeKI GCWGC 6 cut(s) 167, 428, 440, 572, 1058, 1064
ApoI RAATTY 1 cut(s) 958
ArsI GACNNNNNNTTYG 2 cut(s) 813, 845
AspLEI GCGC 1 cut(s) 710
AspS9I GGNCC 5 cut(s) 79, 87, 333, 485, 800
AsuC2I CCSGG 1 cut(s) 483
AsuHPI GGTGA 3 cut(s) 293, 527, 632
AsuNHI GCTAGC 1 cut(s) 899
AvaII GGWCC 4 cut(s) 87, 333, 485, 800
BaeGI GKGCMC 1 cut(s) 228
BbvI GCAGC 6 cut(s) 154, 415, 427, 584, 1045, 1076
BccI CCATC 2 cut(s) 70, 791
BceAI ACGGC 3 cut(s) 27, 166, 259
BcgI CGANNNNNNTGC 2 cut(s) 459, 493
BciT130I CCWGG 4 cut(s) 178, 305, 330, 577
BcnI CCSGG 1 cut(s) 483
BfaI CTAG 2 cut(s) 555, 900
BfoI RGCGCY 1 cut(s) 711
BfrI CTTAAG 1 cut(s) 965
BisI GCNGC 8 cut(s) 168, 429, 441, 573, 897, 1059, 1062, 1065
BlpI GCTNAGC 1 cut(s) 879
BlsI GCNGC 8 cut(s) 169, 430, 442, 574, 898, 1060, 1063, 1066
Bme1390I CCNGG 5 cut(s) 178, 305, 330, 483, 577
Bme18I GGWCC 4 cut(s) 87, 333, 485, 800
BmgT120I GGNCC 5 cut(s) 79, 87, 333, 485, 800
BmiI GGNNCC 2 cut(s) 334, 335
BmrFI CCNGG 5 cut(s) 178, 305, 330, 483, 577
BmsI GCATC 2 cut(s) 196, 655
BmtI GCTAGC 1 cut(s) 903
BoxI GACNNNNGTC 2 cut(s) 338, 522
BpmI CTGGAG 1 cut(s) 732
Bpu1102I GCTNAGC 1 cut(s) 879
BpuMI CCSGG 1 cut(s) 483
Bsa29I ATCGAT 1 cut(s) 348
BsaHI GRCGYC 2 cut(s) 543, 823
BsaJI CCNNGG 7 cut(s) 117, 304, 329, 456, 694, 759, 983
Bse118I RCCGGY 1 cut(s) 49
Bse3DI GCAATG 1 cut(s) 1024
BseBI CCWGG 4 cut(s) 178, 305, 330, 577
BseCI ATCGAT 1 cut(s) 348
BseDI CCNNGG 7 cut(s) 117, 304, 329, 456, 694, 759, 983
BseGI GGATG 3 cut(s) 81, 643, 802
BseMI GCAATG 1 cut(s) 1024
BseMII CTCAG 1 cut(s) 377
BseRI GAGGAG 2 cut(s) 595, 600
BseSI GKGCMC 1 cut(s) 228
BseXI GCAGC 6 cut(s) 154, 415, 427, 584, 1045, 1076
BseYI CCCAGC 1 cut(s) 443
BshFI GGCC 3 cut(s) 14, 80, 181
BshVI ATCGAT 1 cut(s) 348
BsiSI CCGG 2 cut(s) 50, 483
BslFI GGGAC 1 cut(s) 346
BsmFI GGGAC 1 cut(s) 346
BsnI GGCC 3 cut(s) 14, 80, 181
Bsp1286I GDGCHC 1 cut(s) 228
Bsp143I GATC 1 cut(s) 309
Bsp1720I GCTNAGC 1 cut(s) 879
Bsp19I CCATGG 1 cut(s) 456
BspACI CCGC 8 cut(s) 56, 105, 236, 668, 874, 897, 1038, 1062
BspANI GGCC 3 cut(s) 14, 80, 181
BspCNI CTCAG 1 cut(s) 376
BspDI ATCGAT 1 cut(s) 348
BspLI GGNNCC 2 cut(s) 334, 335
BspOI GCTAGC 1 cut(s) 903
BspPI GGATC 1 cut(s) 317
BspTI CTTAAG 1 cut(s) 965
BsrDI GCAATG 1 cut(s) 1024
BsrFI RCCGGY 1 cut(s) 49
BssAI RCCGGY 1 cut(s) 49
BssECI CCNNGG 7 cut(s) 117, 304, 329, 456, 694, 759, 983
BssMI GATC 1 cut(s) 309
BssNI GRCGYC 2 cut(s) 543, 823
BssT1I CCWWGG 5 cut(s) 117, 456, 694, 759, 983
Bst2UI CCWGG 4 cut(s) 178, 305, 330, 577
Bst4CI ACNGT 3 cut(s) 269, 489, 521
BstACI GRCGYC 2 cut(s) 543, 823
BstAFI CTTAAG 1 cut(s) 965
BstC8I GCNNGC 3 cut(s) 650, 876, 901
BstDEI CTNAG 3 cut(s) 220, 363, 879
BstDSI CCRYGG 1 cut(s) 456
BstEII GGTNACC 1 cut(s) 1040
BstF5I GGATG 3 cut(s) 81, 643, 802
BstH2I RGCGCY 1 cut(s) 711
BstHHI GCGC 1 cut(s) 710
BstKTI GATC 1 cut(s) 312
BstMBI GATC 1 cut(s) 309
BstMWI GCNNNNNNNGC 6 cut(s) 206, 437, 658, 770, 880, 1064
BstNI CCWGG 4 cut(s) 178, 305, 330, 577
BstNSI RCATGY 1 cut(s) 652
BstPAI GACNNNNGTC 2 cut(s) 338, 522
BstPI GGTNACC 1 cut(s) 1040
BstSCI CCNGG 5 cut(s) 176, 303, 328, 481, 575
BstSLI GKGCMC 1 cut(s) 228
BstV1I GCAGC 6 cut(s) 154, 415, 427, 584, 1045, 1076
BstXI CCANNNNNNTGG 1 cut(s) 941
Bsu15I ATCGAT 1 cut(s) 348
BsuRI GGCC 3 cut(s) 14, 80, 181
BsuTUI ATCGAT 1 cut(s) 348
BtgI CCRYGG 1 cut(s) 456
BtsCI GGATG 3 cut(s) 81, 643, 802
BtsIMutI CAGTG 1 cut(s) 553
Cac8I GCNNGC 3 cut(s) 650, 876, 901
CfoI GCGC 1 cut(s) 710
Cfr10I RCCGGY 1 cut(s) 49
Cfr13I GGNCC 5 cut(s) 79, 87, 333, 485, 800
ClaI ATCGAT 1 cut(s) 348
CpoI CGGWCCG 1 cut(s) 485
CseI GACGC 1 cut(s) 532
CspI CGGWCCG 1 cut(s) 485
CviAII CATG 6 cut(s) 338, 457, 512, 533, 649, 947
DdeI CTNAG 3 cut(s) 220, 363, 879
DpnI GATC 1 cut(s) 311
DpnII GATC 1 cut(s) 309
DraI TTTAAA 1 cut(s) 723
EaeI YGGCCR 1 cut(s) 179
EciI GGCGGA 2 cut(s) 71, 94
Eco130I CCWWGG 5 cut(s) 117, 456, 694, 759, 983
Eco47I GGWCC 4 cut(s) 87, 333, 485, 800
Eco47III AGCGCT 1 cut(s) 709
Eco91I GGTNACC 1 cut(s) 1040
EcoO109I RGGNCCY 2 cut(s) 87, 333
EcoO65I GGTNACC 1 cut(s) 1040
EcoRII CCWGG 4 cut(s) 176, 303, 328, 575
EcoT14I CCWWGG 5 cut(s) 117, 456, 694, 759, 983
ErhI CCWWGG 5 cut(s) 117, 456, 694, 759, 983
FaeI CATG 6 cut(s) 341, 460, 515, 536, 652, 950
FaqI GGGAC 1 cut(s) 346
FatI CATG 6 cut(s) 337, 456, 511, 532, 648, 946
FauI CCCGC 2 cut(s) 661, 867
FauNDI CATATG 1 cut(s) 736
Fnu4HI GCNGC 8 cut(s) 168, 429, 441, 573, 897, 1059, 1062, 1065
FokI GGATG 3 cut(s) 88, 650, 809
Fsp4HI GCNGC 8 cut(s) 168, 429, 441, 573, 897, 1059, 1062, 1065
FspBI CTAG 2 cut(s) 555, 900
GlaI GCGC 1 cut(s) 709
GluI GCNGC 8 cut(s) 168, 429, 441, 573, 897, 1059, 1062, 1065
GsaI CCCAGC 1 cut(s) 447
GsuI CTGGAG 1 cut(s) 732
HaeII RGCGCY 1 cut(s) 711
HaeIII GGCC 3 cut(s) 14, 80, 181
HapII CCGG 2 cut(s) 50, 483
HgaI GACGC 1 cut(s) 532
HhaI GCGC 1 cut(s) 710
Hin1I GRCGYC 2 cut(s) 543, 823
Hin1II CATG 6 cut(s) 341, 460, 515, 536, 652, 950
Hin6I GCGC 1 cut(s) 708
HinP1I GCGC 1 cut(s) 708
HindIII AAGCTT 2 cut(s) 473, 779
HinfI GANTC 7 cut(s) 376, 410, 416, 588, 829, 841, 865
HpaII CCGG 2 cut(s) 50, 483
HphI GGTGA 3 cut(s) 293, 527, 632
Hpy166II GTNNAC 1 cut(s) 821
Hpy188I TCNGA 6 cut(s) 75, 283, 366, 415, 828, 1051
Hpy188III TCNNGA 3 cut(s) 809, 838, 845
Hpy8I GTNNAC 1 cut(s) 821
Hpy99I CGWCG 2 cut(s) 493, 510
HpyCH4III ACNGT 3 cut(s) 269, 489, 521
HpyCH4IV ACGT 1 cut(s) 823
HpyCH4V TGCA 8 cut(s) 209, 431, 498, 572, 729, 746, 789, 1077
HpyF10VI GCNNNNNNNGC 6 cut(s) 206, 437, 658, 770, 880, 1064
HpyF3I CTNAG 3 cut(s) 220, 363, 879
HpySE526I ACGT 1 cut(s) 823
Hsp92I GRCGYC 2 cut(s) 543, 823
Hsp92II CATG 6 cut(s) 341, 460, 515, 536, 652, 950
HspAI GCGC 1 cut(s) 708
KflI GGGWCCC 1 cut(s) 333
Kzo9I GATC 1 cut(s) 309
LmnI GCTCC 2 cut(s) 96, 770
Lsp1109I GCAGC 6 cut(s) 154, 415, 427, 584, 1045, 1076
LweI GCATC 2 cut(s) 196, 655
MaeI CTAG 2 cut(s) 555, 900
MaeII ACGT 1 cut(s) 823
MaeIII GTNAC 4 cut(s) 403, 515, 560, 1040
MalI GATC 1 cut(s) 311
MboI GATC 1 cut(s) 309
MboII GAAGA 4 cut(s) 287, 460, 860, 935
MhlI GDGCHC 1 cut(s) 228
MluCI AATT 4 cut(s) 724, 804, 958, 1052
MlyI GAGTC 4 cut(s) 385, 404, 597, 835
MmeI TCCRAC 1 cut(s) 43
MnlI CCTC 8 cut(s) 25, 52, 100, 265, 460, 573, 578, 651
MseI TTAA 7 cut(s) 141, 216, 627, 722, 966, 990, 1034
MslI CAYNNNNRTG 1 cut(s) 951
MspA1I CMGCKG 2 cut(s) 428, 874
MspCI CTTAAG 1 cut(s) 965
MspI CCGG 2 cut(s) 50, 483
MspR9I CCNGG 5 cut(s) 178, 305, 330, 483, 577
MvaI CCWGG 4 cut(s) 178, 305, 330, 577
MwoI GCNNNNNNNGC 6 cut(s) 206, 437, 658, 770, 880, 1064
NciI CCSGG 1 cut(s) 483
NcoI CCATGG 1 cut(s) 456
NdeI CATATG 1 cut(s) 736
NdeII GATC 1 cut(s) 309
NheI GCTAGC 1 cut(s) 899
NlaIII CATG 6 cut(s) 341, 460, 515, 536, 652, 950
NlaIV GGNNCC 2 cut(s) 334, 335
NmuCI GTSAC 2 cut(s) 403, 515
NspI RCATGY 1 cut(s) 652
PaeI GCATGC 1 cut(s) 652
PcsI WCGNNNNNNNCGW 3 cut(s) 179, 485, 829
PfeI GAWTC 3 cut(s) 416, 829, 865
PkrI GCNGC 8 cut(s) 169, 430, 442, 574, 898, 1060, 1063, 1066
PleI GAGTC 4 cut(s) 384, 404, 596, 835
PpsI GAGTC 4 cut(s) 384, 404, 596, 835
PpuMI RGGWCCY 2 cut(s) 87, 333
PshAI GACNNNNGTC 2 cut(s) 338, 522
Psp5II RGGWCCY 2 cut(s) 87, 333
Psp6I CCWGG 4 cut(s) 176, 303, 328, 575
PspEI GGTNACC 1 cut(s) 1040
PspFI CCCAGC 1 cut(s) 443
PspGI CCWGG 4 cut(s) 176, 303, 328, 575
PspN4I GGNNCC 2 cut(s) 334, 335
PspPI GGNCC 5 cut(s) 79, 87, 333, 485, 800
PspPPI RGGWCCY 2 cut(s) 87, 333
PvuII CAGCTG 1 cut(s) 428
RseI CAYNNNNRTG 1 cut(s) 951
Rsr2I CGGWCCG 1 cut(s) 485
RsrII CGGWCCG 1 cut(s) 485
SaqAI TTAA 7 cut(s) 141, 216, 627, 722, 966, 990, 1034
SatI GCNGC 8 cut(s) 168, 429, 441, 573, 897, 1059, 1062, 1065
Sau3AI GATC 1 cut(s) 309
Sau96I GGNCC 5 cut(s) 79, 87, 333, 485, 800
SchI GAGTC 4 cut(s) 385, 404, 597, 835
ScrFI CCNGG 5 cut(s) 178, 305, 330, 483, 577
SduI GDGCHC 1 cut(s) 228
SfaNI GCATC 2 cut(s) 196, 655
SgrAI CRCCGGYG 1 cut(s) 49
SinI GGWCC 4 cut(s) 87, 333, 485, 800
SmiMI CAYNNNNRTG 1 cut(s) 951
SmlI CTYRAG 1 cut(s) 965
SmoI CTYRAG 1 cut(s) 965
SphI GCATGC 1 cut(s) 652
Sse9I AATT 4 cut(s) 724, 804, 958, 1052
SsiI CCGC 8 cut(s) 56, 105, 236, 668, 874, 897, 1038, 1062
SspI AATATT 1 cut(s) 502
SspMI CTAG 2 cut(s) 555, 900
StyD4I CCNGG 5 cut(s) 176, 303, 328, 481, 575
StyI CCWWGG 5 cut(s) 117, 456, 694, 759, 983
TaaI ACNGT 3 cut(s) 269, 489, 521
TaiI ACGT 1 cut(s) 826
TaqI TCGA 7 cut(s) 128, 173, 342, 348, 491, 704, 1030
TaqII GACCGA 1 cut(s) 422
TasI AATT 4 cut(s) 724, 804, 958, 1052
TauI GCSGC 2 cut(s) 899, 1064
TfiI GAWTC 3 cut(s) 416, 829, 865
Tru1I TTAA 7 cut(s) 141, 216, 627, 722, 966, 990, 1034
Tru9I TTAA 7 cut(s) 141, 216, 627, 722, 966, 990, 1034
TscAI CASTG 1 cut(s) 553
TseFI GTSAC 2 cut(s) 403, 515
TseI GCWGC 6 cut(s) 167, 428, 440, 572, 1058, 1064
Tsp45I GTSAC 2 cut(s) 403, 515
TspDTI ATGAA 4 cut(s) 287, 549, 753, 936
TspRI CASTG 1 cut(s) 553
Vha464I CTTAAG 1 cut(s) 965
VpaK11BI GGWCC 4 cut(s) 87, 333, 485, 800
XapI RAATTY 1 cut(s) 958
XceI RCATGY 1 cut(s) 652
XcmI CCANNNNNNNNNTGG 1 cut(s) 89
XspI CTAG 2 cut(s) 555, 900
ZraI GACGTC 1 cut(s) 824
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.