Rw6G011270

Amino-acid acetyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0002453
Physical Location & Seq
Forward (+)
19792373 .. 19794587
2215 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G011270.1

Sequence Viewer

Length: 948 bp
ATGACTTCGCAGCTCACCTTGTCGACCTCATCATTCTCCAAGCTGAAGTTCGTCAAGTCCCGACCTCCTTCTCCGACCCAAGCCGACTGGAGCCGCCTCCAATCTGACCCCGAGTCCCCGACCTCAGTCTCTGACCCCGATATTGCTTTTCTTCATCACCTGGGGATCAAGTTTGTTCTTGTTCCAGGGACCCATGTCGAAATCGATACCCTTTTGGCTCAGAGAAGCAAGAGTCCAAAGTTTGCTGGTCAGTATAGAGTGACCGACTCGGATTCTCTAACAGCTGCAAAGGAAGCTGCTGGGAAGATTTCCATGGATATAGAGGCAAAGCTTTCGCCCGGACCGTCGATATGCAATATTCGTCGGCATGGTGACAGTAGTCGTTGGCATGAAGTTGGCGTCAGTGTAGCTAGTGGTAACTTTCTTGCACCCAGGAGGAGAGGAGTCGTTGCTGGTGTTGATTATGGGGCAACAGGTGAAGTTAAGAAAGTGGATGTAGTTCGCATGCGAGAGAGGCTTGATGCGGGTTGTATTGTGCTATTGAGCAACCTTGGTTATTCGAGCTCTGGAGAAGTTTTAAATTGCAACACATATGAAGTTGCAACAGCTTGTTCCTTGGCTATTGGAGCAGATAAGCTTATCTGCATAATGGATGGTCCAATTCTTGATGAGAGTGGACGTCTGATTCGTTTCTTGACTCTTGAAGAAGCAGACAAGTTGATTCGTCAGCGGGCTAAGCAAAGTGAAATAGCCGCTAGCTATGTGAAAGCTGTTGATGAAGAAAATCTCCATTATCTTGGACATGATAGTGGGAATTTTCTTAAGGAAAAGCATATTCCAAGGTTTAACAATGGTGTTGGTTTTGAGAATGGCAATGGATTGTGTCGATTAAGCGGTTACCTTTCAGAATTGGCTGCCGCAGCCTTTGTTTGCAGGGTAAGACCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00220 ko01100 ko01110 ko01130 ko01210 ko01230 map00220 map01100 map01110 map01130 map01210 map01230
Pfam Domains
Protein Families
AA_kinase Acetyltransf_1

Protein Analysis

315

Amino Acids

34.18

Weight (kDa)

8.12

Isoelectric Point (pI)

39.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AA_kinase PF00696 47 - 247 9.3e-09 Amino acid kinase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 682
AccI GTMKAC 1 cut(s) 23
AciI CCGC 6 cut(s) 94, 524, 730, 753, 894, 918
AclWI GGATC 1 cut(s) 173
AcsI RAATTY 1 cut(s) 814
AcuI CTGAAG 1 cut(s) 65
AcyI GRCGYC 2 cut(s) 399, 679
AflII CTTAAG 1 cut(s) 821
AgsI TTSAA 1 cut(s) 704
AhdI GACNNNNNGTC 1 cut(s) 112
AjnI CCWGG 3 cut(s) 159, 184, 431
AjuI GAANNNNNNNTTGG 2 cut(s) 32, 64
Alw21I GWGCWC 1 cut(s) 566
Alw26I GTCTC 1 cut(s) 133
AlwI GGATC 1 cut(s) 173
AlwNI CAGNNNCTG 1 cut(s) 131
Ama87I CYCGRG 1 cut(s) 110
ApeKI GCWGC 5 cut(s) 10, 284, 296, 914, 920
ApoI RAATTY 1 cut(s) 814
ArsI GACNNNNNNTTYG 2 cut(s) 669, 701
AspS9I GGNCC 3 cut(s) 189, 341, 656
AsuC2I CCSGG 1 cut(s) 339
AsuHPI GGTGA 4 cut(s) 7, 149, 383, 488
AsuNHI GCTAGC 1 cut(s) 755
AvaI CYCGRG 1 cut(s) 110
AvaII GGWCC 3 cut(s) 189, 341, 656
BanII GRGCYC 1 cut(s) 566
Bbv12I GWGCWC 1 cut(s) 566
BbvI GCAGC 5 cut(s) 22, 271, 283, 901, 932
BccI CCATC 1 cut(s) 647
BcgI CGANNNNNNTGC 2 cut(s) 315, 349
BciT130I CCWGG 3 cut(s) 161, 186, 433
BcnI CCSGG 1 cut(s) 339
BcoDI GTCTC 1 cut(s) 133
BfaI CTAG 2 cut(s) 411, 756
BfrI CTTAAG 1 cut(s) 821
BisI GCNGC 8 cut(s) 11, 94, 285, 297, 753, 915, 918, 921
BlpI GCTNAGC 1 cut(s) 735
BlsI GCNGC 8 cut(s) 12, 95, 286, 298, 754, 916, 919, 922
Bme1390I CCNGG 4 cut(s) 161, 186, 339, 433
Bme18I GGWCC 3 cut(s) 189, 341, 656
BmeRI GACNNNNNGTC 1 cut(s) 112
BmeT110I CYCGRG 1 cut(s) 110
BmgT120I GGNCC 3 cut(s) 189, 341, 656
BmiI GGNNCC 3 cut(s) 92, 190, 191
BmrFI CCNGG 4 cut(s) 161, 186, 339, 433
BmsI GCATC 1 cut(s) 511
BmtI GCTAGC 1 cut(s) 759
BoxI GACNNNNGTC 3 cut(s) 125, 194, 378
BpmI CTGGAG 2 cut(s) 109, 588
Bpu1102I GCTNAGC 1 cut(s) 735
BpuMI CCSGG 1 cut(s) 339
Bsa29I ATCGAT 1 cut(s) 204
BsaHI GRCGYC 2 cut(s) 399, 679
BsaJI CCNNGG 7 cut(s) 160, 185, 312, 431, 550, 615, 839
Bse1I ACTGG 1 cut(s) 92
Bse3DI GCAATG 1 cut(s) 880
BseBI CCWGG 3 cut(s) 161, 186, 433
BseCI ATCGAT 1 cut(s) 204
BseDI CCNNGG 7 cut(s) 160, 185, 312, 431, 550, 615, 839
BseGI GGATG 2 cut(s) 499, 658
BseMI GCAATG 1 cut(s) 880
BseMII CTCAG 2 cut(s) 138, 233
BseNI ACTGG 1 cut(s) 92
BseRI GAGGAG 2 cut(s) 451, 456
BseXI GCAGC 5 cut(s) 22, 271, 283, 901, 932
BseYI CCCAGC 1 cut(s) 299
BshVI ATCGAT 1 cut(s) 204
BsiHKAI GWGCWC 1 cut(s) 566
BsiHKCI CYCGRG 1 cut(s) 110
BsiSI CCGG 1 cut(s) 339
BslFI GGGAC 3 cut(s) 43, 100, 202
BsmAI GTCTC 1 cut(s) 133
BsmFI GGGAC 3 cut(s) 43, 100, 202
BsoBI CYCGRG 1 cut(s) 110
Bsp1286I GDGCHC 1 cut(s) 566
Bsp143I GATC 1 cut(s) 165
Bsp1720I GCTNAGC 1 cut(s) 735
Bsp19I CCATGG 1 cut(s) 312
BspACI CCGC 6 cut(s) 94, 524, 730, 753, 894, 918
BspCNI CTCAG 2 cut(s) 137, 232
BspDI ATCGAT 1 cut(s) 204
BspLI GGNNCC 3 cut(s) 92, 190, 191
BspOI GCTAGC 1 cut(s) 759
BspPI GGATC 1 cut(s) 173
BspTI CTTAAG 1 cut(s) 821
BsrDI GCAATG 1 cut(s) 880
BsrI ACTGG 1 cut(s) 92
BssECI CCNNGG 7 cut(s) 160, 185, 312, 431, 550, 615, 839
BssMI GATC 1 cut(s) 165
BssNI GRCGYC 2 cut(s) 399, 679
BssT1I CCWWGG 4 cut(s) 312, 550, 615, 839
Bst2UI CCWGG 3 cut(s) 161, 186, 433
Bst4CI ACNGT 2 cut(s) 345, 377
BstACI GRCGYC 2 cut(s) 399, 679
BstAFI CTTAAG 1 cut(s) 821
BstC8I GCNNGC 3 cut(s) 506, 732, 757
BstDEI CTNAG 3 cut(s) 124, 219, 735
BstDSI CCRYGG 1 cut(s) 312
BstEII GGTNACC 1 cut(s) 896
BstF5I GGATG 2 cut(s) 499, 658
BstKTI GATC 1 cut(s) 168
BstMAI GTCTC 1 cut(s) 133
BstMBI GATC 1 cut(s) 165
BstMWI GCNNNNNNNGC 5 cut(s) 293, 514, 626, 736, 920
BstNI CCWGG 3 cut(s) 161, 186, 433
BstNSI RCATGY 1 cut(s) 508
BstPAI GACNNNNGTC 3 cut(s) 125, 194, 378
BstPI GGTNACC 1 cut(s) 896
BstSCI CCNGG 4 cut(s) 159, 184, 337, 431
BstV1I GCAGC 5 cut(s) 22, 271, 283, 901, 932
BstXI CCANNNNNNTGG 1 cut(s) 797
Bsu15I ATCGAT 1 cut(s) 204
BsuTUI ATCGAT 1 cut(s) 204
BtgI CCRYGG 1 cut(s) 312
BtsCI GGATG 2 cut(s) 499, 658
BtsIMutI CAGTG 1 cut(s) 409
Cac8I GCNNGC 3 cut(s) 506, 732, 757
CaiI CAGNNNCTG 1 cut(s) 131
Cfr13I GGNCC 3 cut(s) 189, 341, 656
ClaI ATCGAT 1 cut(s) 204
CpoI CGGWCCG 1 cut(s) 341
CseI GACGC 1 cut(s) 388
CspI CGGWCCG 1 cut(s) 341
CviAII CATG 6 cut(s) 194, 313, 368, 389, 505, 803
DdeI CTNAG 3 cut(s) 124, 219, 735
DpnI GATC 1 cut(s) 167
DpnII GATC 1 cut(s) 165
DraI TTTAAA 1 cut(s) 579
DriI GACNNNNNGTC 1 cut(s) 112
Eam1105I GACNNNNNGTC 1 cut(s) 112
Ecl136II GAGCTC 1 cut(s) 564
Eco130I CCWWGG 4 cut(s) 312, 550, 615, 839
Eco24I GRGCYC 1 cut(s) 566
Eco47I GGWCC 3 cut(s) 189, 341, 656
Eco53kI GAGCTC 1 cut(s) 564
Eco57I CTGAAG 1 cut(s) 65
Eco88I CYCGRG 1 cut(s) 110
Eco91I GGTNACC 1 cut(s) 896
EcoICRI GAGCTC 1 cut(s) 564
EcoO109I RGGNCCY 1 cut(s) 189
EcoO65I GGTNACC 1 cut(s) 896
EcoRII CCWGG 3 cut(s) 159, 184, 431
EcoT14I CCWWGG 4 cut(s) 312, 550, 615, 839
EcoT38I GRGCYC 1 cut(s) 566
ErhI CCWWGG 4 cut(s) 312, 550, 615, 839
FaeI CATG 6 cut(s) 197, 316, 371, 392, 508, 806
FaqI GGGAC 3 cut(s) 43, 100, 202
FatI CATG 6 cut(s) 193, 312, 367, 388, 504, 802
FauI CCCGC 2 cut(s) 517, 723
FauNDI CATATG 1 cut(s) 592
FblI GTMKAC 1 cut(s) 23
Fnu4HI GCNGC 8 cut(s) 11, 94, 285, 297, 753, 915, 918, 921
FokI GGATG 2 cut(s) 506, 665
FriOI GRGCYC 1 cut(s) 566
Fsp4HI GCNGC 8 cut(s) 11, 94, 285, 297, 753, 915, 918, 921
FspBI CTAG 2 cut(s) 411, 756
GluI GCNGC 8 cut(s) 11, 94, 285, 297, 753, 915, 918, 921
GsaI CCCAGC 1 cut(s) 303
GsuI CTGGAG 2 cut(s) 109, 588
HapII CCGG 1 cut(s) 339
HgaI GACGC 1 cut(s) 388
Hin1I GRCGYC 2 cut(s) 399, 679
Hin1II CATG 6 cut(s) 197, 316, 371, 392, 508, 806
HincII GTYRAC 1 cut(s) 24
HindII GTYRAC 1 cut(s) 24
HindIII AAGCTT 2 cut(s) 329, 635
HinfI GANTC 8 cut(s) 113, 232, 266, 272, 444, 685, 697, 721
HpaII CCGG 1 cut(s) 339
HphI GGTGA 4 cut(s) 7, 149, 383, 488
Hpy166II GTNNAC 2 cut(s) 24, 677
Hpy188I TCNGA 7 cut(s) 75, 106, 133, 222, 271, 684, 907
Hpy188III TCNNGA 5 cut(s) 60, 567, 665, 694, 701
Hpy8I GTNNAC 2 cut(s) 24, 677
Hpy99I CGWCG 2 cut(s) 349, 366
HpyAV CCTTC 1 cut(s) 78
HpyCH4III ACNGT 2 cut(s) 345, 377
HpyCH4IV ACGT 1 cut(s) 679
HpyCH4V TGCA 7 cut(s) 287, 354, 428, 585, 602, 645, 933
HpyF10VI GCNNNNNNNGC 5 cut(s) 293, 514, 626, 736, 920
HpyF3I CTNAG 3 cut(s) 124, 219, 735
HpySE526I ACGT 1 cut(s) 679
Hsp92I GRCGYC 2 cut(s) 399, 679
Hsp92II CATG 6 cut(s) 197, 316, 371, 392, 508, 806
KflI GGGWCCC 1 cut(s) 189
Kzo9I GATC 1 cut(s) 165
LmnI GCTCC 2 cut(s) 90, 626
Lsp1109I GCAGC 5 cut(s) 22, 271, 283, 901, 932
LweI GCATC 1 cut(s) 511
MaeI CTAG 2 cut(s) 411, 756
MaeII ACGT 1 cut(s) 679
MaeIII GTNAC 4 cut(s) 259, 371, 416, 896
MalI GATC 1 cut(s) 167
MboI GATC 1 cut(s) 165
MboII GAAGA 4 cut(s) 143, 316, 716, 791
MhlI GDGCHC 1 cut(s) 566
MluCI AATT 4 cut(s) 580, 660, 814, 908
MlyI GAGTC 5 cut(s) 122, 241, 260, 453, 691
MmeI TCCRAC 1 cut(s) 98
MnlI CCTC 8 cut(s) 37, 75, 107, 133, 316, 429, 434, 507
MseI TTAA 5 cut(s) 483, 578, 822, 846, 890
MslI CAYNNNNRTG 1 cut(s) 807
MspA1I CMGCKG 2 cut(s) 284, 730
MspCI CTTAAG 1 cut(s) 821
MspI CCGG 1 cut(s) 339
MspR9I CCNGG 4 cut(s) 161, 186, 339, 433
MvaI CCWGG 3 cut(s) 161, 186, 433
MwoI GCNNNNNNNGC 5 cut(s) 293, 514, 626, 736, 920
NciI CCSGG 1 cut(s) 339
NcoI CCATGG 1 cut(s) 312
NdeI CATATG 1 cut(s) 592
NdeII GATC 1 cut(s) 165
NheI GCTAGC 1 cut(s) 755
NlaIII CATG 6 cut(s) 197, 316, 371, 392, 508, 806
NlaIV GGNNCC 3 cut(s) 92, 190, 191
NmuCI GTSAC 2 cut(s) 259, 371
NspI RCATGY 1 cut(s) 508
PaeI GCATGC 1 cut(s) 508
PcsI WCGNNNNNNNCGW 2 cut(s) 341, 685
PfeI GAWTC 3 cut(s) 272, 685, 721
PkrI GCNGC 8 cut(s) 12, 95, 286, 298, 754, 916, 919, 922
PleI GAGTC 5 cut(s) 121, 240, 260, 452, 691
PpsI GAGTC 5 cut(s) 121, 240, 260, 452, 691
PpuMI RGGWCCY 1 cut(s) 189
PshAI GACNNNNGTC 3 cut(s) 125, 194, 378
Psp124BI GAGCTC 1 cut(s) 566
Psp5II RGGWCCY 1 cut(s) 189
Psp6I CCWGG 3 cut(s) 159, 184, 431
PspEI GGTNACC 1 cut(s) 896
PspFI CCCAGC 1 cut(s) 299
PspGI CCWGG 3 cut(s) 159, 184, 431
PspN4I GGNNCC 3 cut(s) 92, 190, 191
PspPI GGNCC 3 cut(s) 189, 341, 656
PspPPI RGGWCCY 1 cut(s) 189
PstNI CAGNNNCTG 1 cut(s) 131
PvuII CAGCTG 1 cut(s) 284
RseI CAYNNNNRTG 1 cut(s) 807
Rsr2I CGGWCCG 1 cut(s) 341
RsrII CGGWCCG 1 cut(s) 341
SacI GAGCTC 1 cut(s) 566
SalI GTCGAC 1 cut(s) 22
SaqAI TTAA 5 cut(s) 483, 578, 822, 846, 890
SatI GCNGC 8 cut(s) 11, 94, 285, 297, 753, 915, 918, 921
Sau3AI GATC 1 cut(s) 165
Sau96I GGNCC 3 cut(s) 189, 341, 656
SchI GAGTC 5 cut(s) 122, 241, 260, 453, 691
ScrFI CCNGG 4 cut(s) 161, 186, 339, 433
SduI GDGCHC 1 cut(s) 566
SfaNI GCATC 1 cut(s) 511
SinI GGWCC 3 cut(s) 189, 341, 656
SmiMI CAYNNNNRTG 1 cut(s) 807
SmlI CTYRAG 1 cut(s) 821
SmoI CTYRAG 1 cut(s) 821
SphI GCATGC 1 cut(s) 508
Sse9I AATT 4 cut(s) 580, 660, 814, 908
SsiI CCGC 6 cut(s) 94, 524, 730, 753, 894, 918
SspI AATATT 1 cut(s) 358
SspMI CTAG 2 cut(s) 411, 756
SstI GAGCTC 1 cut(s) 566
StyD4I CCNGG 4 cut(s) 159, 184, 337, 431
StyI CCWWGG 4 cut(s) 312, 550, 615, 839
TaaI ACNGT 2 cut(s) 345, 377
TaiI ACGT 1 cut(s) 682
TaqI TCGA 6 cut(s) 23, 198, 204, 347, 560, 886
TaqII GACCGA 1 cut(s) 278
TasI AATT 4 cut(s) 580, 660, 814, 908
TauI GCSGC 3 cut(s) 96, 755, 920
TfiI GAWTC 3 cut(s) 272, 685, 721
Tru1I TTAA 5 cut(s) 483, 578, 822, 846, 890
Tru9I TTAA 5 cut(s) 483, 578, 822, 846, 890
TscAI CASTG 1 cut(s) 409
TseFI GTSAC 2 cut(s) 259, 371
TseI GCWGC 5 cut(s) 10, 284, 296, 914, 920
Tsp45I GTSAC 2 cut(s) 259, 371
TspDTI ATGAA 4 cut(s) 143, 405, 609, 792
TspRI CASTG 1 cut(s) 409
Vha464I CTTAAG 1 cut(s) 821
VpaK11BI GGWCC 3 cut(s) 189, 341, 656
XapI RAATTY 1 cut(s) 814
XceI RCATGY 1 cut(s) 508
XmiI GTMKAC 1 cut(s) 23
XspI CTAG 2 cut(s) 411, 756
ZraI GACGTC 1 cut(s) 680
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.