Rmu_sc0005093.1_g000005

Amino-acid acetyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005093.1
OG0002453
Physical Location & Seq
Reverse (-)
31049 .. 34112
3064 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005093.1_g000005.1.cds

Sequence Viewer

Length: 705 bp
atgtggcacaaggccaatgctgctgcgtttgggccggtgatggaggacagcgagagcgacggcgagatcgagggacccatgtcgaaatcgagacatcaagtttgttcttgttctagggacccatgtcgaaatcgatacccttttggctcagaaaatagtcgttggcatgaagttggcgtcagtgtagctagtggtaactttcttgcacccaggaggagaggagtcgttgctggtgttgattatggggcaacaggtgaagttaagaaagtggatgtagttcgcatgcgagagaggcttgatgctggttgtattgtgctattgagcaaccttggttattcgagctctggaaaagttttaaattgcaacacgtatgaagttgcaacagcttgttccttggctattggagcagataagcttatctgcataatggatggtccaattcttgatgagagtggacgtctgattcgtttcttgactcttgaagaagcagacaagttgattcgtcagcgggctaagcaaagtgaaatagccgctagctatgtgaaagctgttgatgaagaaaatctccattatcttggacatgatagtgggaattttcttaaggaaaagcatattccaaggtttaacaatggtgttggttttgagaatggcaatggattgtggtctggtgaacaaggttttgccacgagcgccaaagtcgattaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00220 ko01100 ko01110 ko01130 ko01210 ko01230 map00220 map01100 map01110 map01130 map01210 map01230
Pfam Domains
Protein Families
AA_kinase Acetyltransf_1

Protein Analysis

234

Amino Acids

25.53

Weight (kDa)

6.1

Isoelectric Point (pI)

38.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 460
AciI CCGC 2 cut(s) 508, 531
AcsI RAATTY 1 cut(s) 592
AcyI GRCGYC 2 cut(s) 177, 457
AflII CTTAAG 1 cut(s) 599
AflIII ACRYGT 1 cut(s) 366
AgsI TTSAA 1 cut(s) 482
AjnI CCWGG 1 cut(s) 209
AluBI AGCT 6 cut(s) 188, 342, 386, 415, 537, 548
AluI AGCT 6 cut(s) 188, 342, 386, 415, 537, 548
Alw21I GWGCWC 1 cut(s) 344
Alw26I GTCTC 1 cut(s) 85
AoxI GGCC 2 cut(s) 12, 32
ApeKI GCWGC 2 cut(s) 20, 23
ApoI RAATTY 1 cut(s) 592
ArsI GACNNNNNNTTYG 4 cut(s) 84, 116, 447, 479
AspLEI GCGC 1 cut(s) 692
AspS9I GGNCC 4 cut(s) 32, 74, 118, 434
AsuHPI GGTGA 3 cut(s) 49, 266, 680
AsuNHI GCTAGC 1 cut(s) 533
AvaII GGWCC 3 cut(s) 74, 118, 434
BanII GRGCYC 1 cut(s) 344
BauI CACGAG 1 cut(s) 685
Bbv12I GWGCWC 1 cut(s) 344
BbvI GCAGC 2 cut(s) 7, 10
BccI CCATC 2 cut(s) 34, 425
BceAI ACGGC 1 cut(s) 76
BciT130I CCWGG 1 cut(s) 211
BcoDI GTCTC 1 cut(s) 85
BfaI CTAG 3 cut(s) 114, 189, 534
BfoI RGCGCY 1 cut(s) 693
BfrI CTTAAG 1 cut(s) 599
BisI GCNGC 3 cut(s) 21, 24, 531
BlpI GCTNAGC 1 cut(s) 513
BlsI GCNGC 3 cut(s) 22, 25, 532
Bme1390I CCNGG 1 cut(s) 211
Bme18I GGWCC 3 cut(s) 74, 118, 434
BmgT120I GGNCC 4 cut(s) 32, 74, 118, 434
BmiI GGNNCC 4 cut(s) 75, 76, 119, 120
BmrFI CCNGG 1 cut(s) 211
BmsI GCATC 1 cut(s) 289
BmtI GCTAGC 1 cut(s) 537
BoxI GACNNNNGTC 2 cut(s) 79, 123
Bpu1102I GCTNAGC 1 cut(s) 513
Bsa29I ATCGAT 1 cut(s) 133
BsaAI YACGTR 1 cut(s) 369
BsaHI GRCGYC 2 cut(s) 177, 457
BsaJI CCNNGG 4 cut(s) 209, 328, 393, 617
Bse118I RCCGGY 1 cut(s) 34
Bse3DI GCAATG 1 cut(s) 658
BseBI CCWGG 1 cut(s) 211
BseCI ATCGAT 1 cut(s) 133
BseDI CCNNGG 4 cut(s) 209, 328, 393, 617
BseGI GGATG 2 cut(s) 277, 436
BseMI GCAATG 1 cut(s) 658
BseMII CTCAG 1 cut(s) 162
BseRI GAGGAG 2 cut(s) 229, 234
BseXI GCAGC 2 cut(s) 7, 10
BshFI GGCC 2 cut(s) 14, 34
BshVI ATCGAT 1 cut(s) 133
BsiHKAI GWGCWC 1 cut(s) 344
BsiSI CCGG 1 cut(s) 35
BslFI GGGAC 2 cut(s) 87, 131
BsmAI GTCTC 1 cut(s) 85
BsmFI GGGAC 2 cut(s) 87, 131
BsnI GGCC 2 cut(s) 14, 34
Bsp1286I GDGCHC 1 cut(s) 344
Bsp143I GATC 1 cut(s) 66
Bsp1720I GCTNAGC 1 cut(s) 513
BspACI CCGC 2 cut(s) 508, 531
BspANI GGCC 2 cut(s) 14, 34
BspCNI CTCAG 1 cut(s) 161
BspDI ATCGAT 1 cut(s) 133
BspLI GGNNCC 4 cut(s) 75, 76, 119, 120
BspOI GCTAGC 1 cut(s) 537
BspTI CTTAAG 1 cut(s) 599
BsrDI GCAATG 1 cut(s) 658
BsrFI RCCGGY 1 cut(s) 34
BssAI RCCGGY 1 cut(s) 34
BssECI CCNNGG 4 cut(s) 209, 328, 393, 617
BssMI GATC 1 cut(s) 66
BssNI GRCGYC 2 cut(s) 177, 457
BssSI CACGAG 1 cut(s) 685
BssT1I CCWWGG 3 cut(s) 328, 393, 617
Bst2BI CACGAG 1 cut(s) 685
Bst2UI CCWGG 1 cut(s) 211
BstACI GRCGYC 2 cut(s) 177, 457
BstAFI CTTAAG 1 cut(s) 599
BstBAI YACGTR 1 cut(s) 369
BstC8I GCNNGC 3 cut(s) 284, 510, 535
BstDEI CTNAG 2 cut(s) 148, 513
BstF5I GGATG 2 cut(s) 277, 436
BstH2I RGCGCY 1 cut(s) 693
BstHHI GCGC 1 cut(s) 692
BstKTI GATC 1 cut(s) 69
BstMAI GTCTC 1 cut(s) 85
BstMBI GATC 1 cut(s) 66
BstMWI GCNNNNNNNGC 5 cut(s) 20, 292, 404, 514, 689
BstNI CCWGG 1 cut(s) 211
BstNSI RCATGY 1 cut(s) 286
BstPAI GACNNNNGTC 2 cut(s) 79, 123
BstSCI CCNGG 1 cut(s) 209
BstV1I GCAGC 2 cut(s) 7, 10
BstXI CCANNNNNNTGG 1 cut(s) 575
Bsu15I ATCGAT 1 cut(s) 133
BsuRI GGCC 2 cut(s) 14, 34
BsuTUI ATCGAT 1 cut(s) 133
BtsCI GGATG 2 cut(s) 277, 436
BtsIMutI CAGTG 1 cut(s) 187
Cac8I GCNNGC 3 cut(s) 284, 510, 535
CfoI GCGC 1 cut(s) 692
Cfr10I RCCGGY 1 cut(s) 34
Cfr13I GGNCC 4 cut(s) 32, 74, 118, 434
ClaI ATCGAT 1 cut(s) 133
CseI GACGC 1 cut(s) 166
CviAII CATG 5 cut(s) 79, 123, 167, 283, 581
DdeI CTNAG 2 cut(s) 148, 513
DpnI GATC 1 cut(s) 68
DpnII GATC 1 cut(s) 66
DraI TTTAAA 1 cut(s) 357
Ecl136II GAGCTC 1 cut(s) 342
Eco130I CCWWGG 3 cut(s) 328, 393, 617
Eco24I GRGCYC 1 cut(s) 344
Eco47I GGWCC 3 cut(s) 74, 118, 434
Eco53kI GAGCTC 1 cut(s) 342
EcoICRI GAGCTC 1 cut(s) 342
EcoO109I RGGNCCY 2 cut(s) 74, 118
EcoRII CCWGG 1 cut(s) 209
EcoT14I CCWWGG 3 cut(s) 328, 393, 617
EcoT38I GRGCYC 1 cut(s) 344
ErhI CCWWGG 3 cut(s) 328, 393, 617
FaeI CATG 5 cut(s) 82, 126, 170, 286, 584
FaqI GGGAC 2 cut(s) 87, 131
FatI CATG 5 cut(s) 78, 122, 166, 282, 580
FauI CCCGC 1 cut(s) 501
Fnu4HI GCNGC 3 cut(s) 21, 24, 531
FokI GGATG 2 cut(s) 284, 443
FriOI GRGCYC 1 cut(s) 344
Fsp4HI GCNGC 3 cut(s) 21, 24, 531
FspBI CTAG 3 cut(s) 114, 189, 534
GlaI GCGC 1 cut(s) 691
GluI GCNGC 3 cut(s) 21, 24, 531
HaeII RGCGCY 1 cut(s) 693
HaeIII GGCC 2 cut(s) 14, 34
HapII CCGG 1 cut(s) 35
HgaI GACGC 1 cut(s) 166
HhaI GCGC 1 cut(s) 692
Hin1I GRCGYC 2 cut(s) 177, 457
Hin1II CATG 5 cut(s) 82, 126, 170, 286, 584
Hin6I GCGC 1 cut(s) 690
HinP1I GCGC 1 cut(s) 690
HindIII AAGCTT 1 cut(s) 413
HinfI GANTC 4 cut(s) 222, 463, 475, 499
HpaII CCGG 1 cut(s) 35
HphI GGTGA 3 cut(s) 49, 266, 680
Hpy166II GTNNAC 2 cut(s) 455, 671
Hpy188I TCNGA 2 cut(s) 151, 462
Hpy188III TCNNGA 5 cut(s) 90, 345, 443, 472, 479
Hpy8I GTNNAC 2 cut(s) 455, 671
Hpy99I CGWCG 1 cut(s) 62
HpyCH4IV ACGT 2 cut(s) 368, 457
HpyCH4V TGCA 4 cut(s) 206, 363, 380, 423
HpyF10VI GCNNNNNNNGC 5 cut(s) 20, 292, 404, 514, 689
HpyF3I CTNAG 2 cut(s) 148, 513
HpySE526I ACGT 2 cut(s) 368, 457
Hsp92I GRCGYC 2 cut(s) 177, 457
Hsp92II CATG 5 cut(s) 82, 126, 170, 286, 584
HspAI GCGC 1 cut(s) 690
KflI GGGWCCC 2 cut(s) 74, 118
Kzo9I GATC 1 cut(s) 66
LmnI GCTCC 1 cut(s) 404
LpnPI CCDG 8 cut(s) 48, 196, 216, 223, 237, 288, 330, 651
Lsp1109I GCAGC 2 cut(s) 7, 10
LweI GCATC 1 cut(s) 289
MaeI CTAG 3 cut(s) 114, 189, 534
MaeII ACGT 2 cut(s) 368, 457
MaeIII GTNAC 1 cut(s) 194
MalI GATC 1 cut(s) 68
MboI GATC 1 cut(s) 66
MboII GAAGA 2 cut(s) 494, 569
MhlI GDGCHC 1 cut(s) 344
MluCI AATT 3 cut(s) 358, 438, 592
MlyI GAGTC 2 cut(s) 231, 469
MnlI CCTC 5 cut(s) 37, 64, 207, 212, 285
MseI TTAA 5 cut(s) 261, 356, 600, 624, 703
MslI CAYNNNNRTG 1 cut(s) 585
MspA1I CMGCKG 1 cut(s) 508
MspCI CTTAAG 1 cut(s) 599
MspI CCGG 1 cut(s) 35
MspR9I CCNGG 1 cut(s) 211
MvaI CCWGG 1 cut(s) 211
MwoI GCNNNNNNNGC 5 cut(s) 20, 292, 404, 514, 689
NdeII GATC 1 cut(s) 66
NheI GCTAGC 1 cut(s) 533
NlaIII CATG 5 cut(s) 82, 126, 170, 286, 584
NlaIV GGNNCC 4 cut(s) 75, 76, 119, 120
NspI RCATGY 1 cut(s) 286
PaeI GCATGC 1 cut(s) 286
PcsI WCGNNNNNNNCGW 2 cut(s) 66, 463
PfeI GAWTC 2 cut(s) 463, 499
PkrI GCNGC 3 cut(s) 22, 25, 532
PleI GAGTC 2 cut(s) 230, 469
PpsI GAGTC 2 cut(s) 230, 469
Ppu21I YACGTR 1 cut(s) 369
PpuMI RGGWCCY 2 cut(s) 74, 118
PshAI GACNNNNGTC 2 cut(s) 79, 123
Psp124BI GAGCTC 1 cut(s) 344
Psp5II RGGWCCY 2 cut(s) 74, 118
Psp6I CCWGG 1 cut(s) 209
PspGI CCWGG 1 cut(s) 209
PspN4I GGNNCC 4 cut(s) 75, 76, 119, 120
PspPI GGNCC 4 cut(s) 32, 74, 118, 434
PspPPI RGGWCCY 2 cut(s) 74, 118
RseI CAYNNNNRTG 1 cut(s) 585
SacI GAGCTC 1 cut(s) 344
SaqAI TTAA 5 cut(s) 261, 356, 600, 624, 703
SatI GCNGC 3 cut(s) 21, 24, 531
Sau3AI GATC 1 cut(s) 66
Sau96I GGNCC 4 cut(s) 32, 74, 118, 434
SchI GAGTC 2 cut(s) 231, 469
ScrFI CCNGG 1 cut(s) 211
SduI GDGCHC 1 cut(s) 344
SfaNI GCATC 1 cut(s) 289
SinI GGWCC 3 cut(s) 74, 118, 434
SmiMI CAYNNNNRTG 1 cut(s) 585
SmlI CTYRAG 1 cut(s) 599
SmoI CTYRAG 1 cut(s) 599
SphI GCATGC 1 cut(s) 286
Sse9I AATT 3 cut(s) 358, 438, 592
SsiI CCGC 2 cut(s) 508, 531
SspMI CTAG 3 cut(s) 114, 189, 534
SstI GAGCTC 1 cut(s) 344
StyD4I CCNGG 1 cut(s) 209
StyI CCWWGG 3 cut(s) 328, 393, 617
TaiI ACGT 2 cut(s) 371, 460
TaqI TCGA 7 cut(s) 69, 83, 89, 127, 133, 338, 699
TasI AATT 3 cut(s) 358, 438, 592
TauI GCSGC 1 cut(s) 533
TfiI GAWTC 2 cut(s) 463, 499
Tru1I TTAA 5 cut(s) 261, 356, 600, 624, 703
Tru9I TTAA 5 cut(s) 261, 356, 600, 624, 703
TscAI CASTG 1 cut(s) 187
TseI GCWGC 2 cut(s) 20, 23
TspDTI ATGAA 3 cut(s) 183, 387, 570
TspRI CASTG 1 cut(s) 187
Vha464I CTTAAG 1 cut(s) 599
VpaK11BI GGWCC 3 cut(s) 74, 118, 434
XapI RAATTY 1 cut(s) 592
XceI RCATGY 1 cut(s) 286
XspI CTAG 3 cut(s) 114, 189, 534
ZraI GACGTC 1 cut(s) 458
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.