Rorug01G0445400

Amino-acid acetyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0002453
Physical Location & Seq
Forward (+)
54165297 .. 54167284
1988 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0445400.1

Sequence Viewer

Length: 996 bp
ATGAAAATCTTCCTGAAATTCTGCTGCCTATTTTCTTCTTCTTCTTGTTCTGAATCTTCAATGGCTTCTTCGCTTCTCTCAATCTTTCTTCTTTTGCCCATCTTCTCCATCTCCTCCTGCTCTGCCGAAACTAGCAGGAAGGAGTTAAGGAGTAAGGAATTCAACCAGGAAGCATTGATACAGTTGGGTCACTCGGTTGATTACAACAGAATTGACCCGTCAAGGGTTGTTCAACTTTCTTGGCGACCAAGGGTGTTTCTGTACAAAGGATTCCTATCTGATGAGGAGTGTGACCACCTTATTTCTTTGGCAAATGGTGGAGGAGAGAAGTCTTCAACAGAATATGATGAAGCTGGAAACAGCAACACAAATAGGATGCTTAAAAGTTTAGACCTTCCCTTGAGCACGGAGGATGGTATAGTTTCAAAGATTGAGGAAAAGATCTCGGCCTGGACTTTCCTTCCTAAAGAGAACAGCAGAGCTTTACAGGTTTTGCATTACGACCTTGAGGAGGCAGAGAAGAATTACAATTATTTTGGCAACAAATCCACATTGGAACAAAGTGAGCCCTTGTTAGCAACAGTTCTTCTTTATCTCTCAAACGTCACTCGTGGTGGTGAGATTCTATTCCCGGAGTCAGAGCTGAAGAGCAATGCCCAGTCTGGTTGTGGAAAGAGTAGCAGTATCTTGAAACCAACCAAAGGAAATGCAATTCTGTTTTTCAATCTCCATCCTAACGCTTCTCCCGACAAGAGCAGTTCCCATGCCCGATGCCCCGTACTCGAAGGCGAAATGTGGTGCGCCACAAAGTTCCTTCATGCGAAAGCCATTCCTCGGGAAAATTCCTCCTCCAATTCTGATAGCAGCGATTGCACTGATGAAGACGATAGCTGTCCCAGGTGGGCAGACATTGGGGAGTGTCAAAGGAACCCTGTATTCATGATTGGCTCCGATGATTACTACGGTACATGCACGAAGAGTTGTAATGCATGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00220 ko01100 ko01110 ko01130 ko01210 ko01230 map00220 map01100 map01110 map01130 map01210 map01230
Pfam Domains
Protein Families
AA_kinase Acetyltransf_1

Protein Analysis

331

Amino Acids

36.7

Weight (kDa)

5.15

Isoelectric Point (pI)

55.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 3 cut(s) 17, 158, 841
AcuI CTGAAG 1 cut(s) 665
AfaI GTAC 3 cut(s) 263, 780, 967
AfiI CCNNNNNNNGG 4 cut(s) 223, 511, 701, 834
AgsI TTSAA 7 cut(s) 60, 163, 233, 336, 426, 691, 724
AjnI CCWGG 3 cut(s) 165, 449, 896
AluBI AGCT 4 cut(s) 353, 482, 643, 891
AluI AGCT 4 cut(s) 353, 482, 643, 891
Alw21I GWGCWC 1 cut(s) 407
Ama87I CYCGRG 1 cut(s) 834
AoxI GGCC 1 cut(s) 447
ApeKI GCWGC 2 cut(s) 24, 864
ApoI RAATTY 3 cut(s) 17, 158, 841
Asp700I GAANNNNTTC 1 cut(s) 8
AspLEI GCGC 1 cut(s) 803
AsuC2I CCSGG 1 cut(s) 632
AsuHPI GGTGA 1 cut(s) 629
AvaI CYCGRG 1 cut(s) 834
BanII GRGCYC 1 cut(s) 570
BarI GAAGNNNNNNTAC 2 cut(s) 162, 194
BauI CACGAG 1 cut(s) 609
BbsI GAAGAC 2 cut(s) 324, 888
Bbv12I GWGCWC 1 cut(s) 407
BbvI GCAGC 2 cut(s) 11, 876
BccI CCATC 4 cut(s) 107, 116, 407, 738
BciT130I CCWGG 3 cut(s) 167, 451, 898
BcnI CCSGG 1 cut(s) 632
BfaI CTAG 1 cut(s) 132
BglII AGATCT 1 cut(s) 441
BisI GCNGC 2 cut(s) 25, 865
BlsI GCNGC 2 cut(s) 26, 866
Bme1390I CCNGG 4 cut(s) 167, 451, 632, 898
BmeT110I CYCGRG 1 cut(s) 834
BmiI GGNNCC 2 cut(s) 929, 949
BmrFI CCNGG 4 cut(s) 167, 451, 632, 898
BmrI ACTGGG 1 cut(s) 652
BmsI GCATC 2 cut(s) 366, 761
BmuI ACTGGG 1 cut(s) 652
BpiI GAAGAC 2 cut(s) 324, 888
BpuEI CTTGAG 2 cut(s) 421, 527
BpuMI CCSGG 1 cut(s) 632
BsaBI GATNNNNATC 1 cut(s) 274
BsaJI CCNNGG 3 cut(s) 248, 833, 896
Bsc4I CCNNNNNNNGG 4 cut(s) 223, 511, 701, 834
Bse1I ACTGG 1 cut(s) 658
Bse3DI GCAATG 1 cut(s) 658
Bse8I GATNNNNATC 1 cut(s) 274
BseBI CCWGG 3 cut(s) 167, 451, 898
BseDI CCNNGG 3 cut(s) 248, 833, 896
BseGI GGATG 3 cut(s) 381, 418, 730
BseJI GATNNNNATC 1 cut(s) 274
BseLI CCNNNNNNNGG 4 cut(s) 223, 511, 701, 834
BseMI GCAATG 1 cut(s) 658
BseNI ACTGG 1 cut(s) 658
BseRI GAGGAG 5 cut(s) 103, 299, 336, 524, 838
BseXI GCAGC 2 cut(s) 11, 876
BshFI GGCC 1 cut(s) 449
BsiHKAI GWGCWC 1 cut(s) 407
BsiHKCI CYCGRG 1 cut(s) 834
BsiSI CCGG 1 cut(s) 632
BslFI GGGAC 1 cut(s) 879
BslI CCNNNNNNNGG 4 cut(s) 223, 511, 701, 834
BsmFI GGGAC 1 cut(s) 879
BsnI GGCC 1 cut(s) 449
BsoBI CYCGRG 1 cut(s) 834
Bsp1286I GDGCHC 2 cut(s) 407, 570
Bsp1407I TGTACA 1 cut(s) 261
Bsp143I GATC 1 cut(s) 441
BspANI GGCC 1 cut(s) 449
BspHI TCATGA 1 cut(s) 939
BspLI GGNNCC 2 cut(s) 929, 949
BspQI GCTCTTC 1 cut(s) 641
BsrDI GCAATG 1 cut(s) 658
BsrGI TGTACA 1 cut(s) 261
BsrI ACTGG 1 cut(s) 658
BssECI CCNNGG 3 cut(s) 248, 833, 896
BssMI GATC 1 cut(s) 441
BssSI CACGAG 1 cut(s) 609
BssT1I CCWWGG 1 cut(s) 248
Bst2BI CACGAG 1 cut(s) 609
Bst2UI CCWGG 3 cut(s) 167, 451, 898
Bst4CI ACNGT 3 cut(s) 183, 583, 965
Bst6I CTCTTC 2 cut(s) 641, 971
BstAPI GCANNNNNTGC 1 cut(s) 870
BstAUI TGTACA 1 cut(s) 261
BstC8I GCNNGC 1 cut(s) 991
BstENI CCTNNNNNAGG 1 cut(s) 509
BstF5I GGATG 3 cut(s) 381, 418, 730
BstHHI GCGC 1 cut(s) 803
BstKTI GATC 1 cut(s) 444
BstMBI GATC 1 cut(s) 441
BstMWI GCNNNNNNNGC 1 cut(s) 870
BstNI CCWGG 3 cut(s) 167, 451, 898
BstNSI RCATGY 2 cut(s) 972, 993
BstSCI CCNGG 4 cut(s) 165, 449, 630, 896
BstV1I GCAGC 2 cut(s) 11, 876
BstV2I GAAGAC 2 cut(s) 324, 888
BstX2I RGATCY 1 cut(s) 441
BstYI RGATCY 1 cut(s) 441
BsuRI GGCC 1 cut(s) 449
BtsCI GGATG 3 cut(s) 381, 418, 730
BtsIMutI CAGTG 1 cut(s) 873
Cac8I GCNNGC 1 cut(s) 991
CciI TCATGA 1 cut(s) 939
CfoI GCGC 1 cut(s) 803
Csp6I GTAC 3 cut(s) 262, 779, 966
CviAII CATG 5 cut(s) 764, 818, 940, 969, 990
CviJI RGCY 9 cut(s) 65, 353, 449, 482, 568, 643, 827, 891, 948
CviKI_1 RGCY 9 cut(s) 65, 353, 449, 482, 568, 643, 827, 891, 948
CviQI GTAC 3 cut(s) 262, 779, 966
DpnI GATC 1 cut(s) 443
DpnII GATC 1 cut(s) 441
Eam1104I CTCTTC 2 cut(s) 641, 971
EarI CTCTTC 2 cut(s) 641, 971
Eco130I CCWWGG 1 cut(s) 248
Eco24I GRGCYC 1 cut(s) 570
Eco57I CTGAAG 1 cut(s) 665
Eco88I CYCGRG 1 cut(s) 834
EcoNI CCTNNNNNAGG 1 cut(s) 509
EcoRI GAATTC 1 cut(s) 158
EcoRII CCWGG 3 cut(s) 165, 449, 896
EcoT14I CCWWGG 1 cut(s) 248
EcoT22I ATGCAT 1 cut(s) 991
EcoT38I GRGCYC 1 cut(s) 570
ErhI CCWWGG 1 cut(s) 248
FaeI CATG 5 cut(s) 767, 821, 943, 972, 993
FaiI YATR 7 cut(s) 345, 419, 765, 819, 941, 970, 991
FaqI GGGAC 1 cut(s) 879
FatI CATG 5 cut(s) 763, 817, 939, 968, 989
Fnu4HI GCNGC 2 cut(s) 25, 865
FokI GGATG 3 cut(s) 388, 425, 717
FriOI GRGCYC 1 cut(s) 570
Fsp4HI GCNGC 2 cut(s) 25, 865
FspBI CTAG 1 cut(s) 132
GlaI GCGC 1 cut(s) 802
GluI GCNGC 2 cut(s) 25, 865
HaeIII GGCC 1 cut(s) 449
HapII CCGG 1 cut(s) 632
HhaI GCGC 1 cut(s) 803
Hin1II CATG 5 cut(s) 767, 821, 943, 972, 993
Hin6I GCGC 1 cut(s) 801
HinP1I GCGC 1 cut(s) 801
HinfI GANTC 4 cut(s) 53, 270, 622, 635
HpaII CCGG 1 cut(s) 632
HphI GGTGA 1 cut(s) 629
Hpy188I TCNGA 5 cut(s) 52, 280, 640, 859, 952
Hpy188III TCNNGA 5 cut(s) 13, 688, 746, 836, 940
HpyAV CCTTC 5 cut(s) 133, 404, 470, 779, 824
HpyCH4III ACNGT 3 cut(s) 183, 583, 965
HpyCH4IV ACGT 1 cut(s) 603
HpyCH4V TGCA 5 cut(s) 496, 710, 873, 972, 989
HpyF10VI GCNNNNNNNGC 1 cut(s) 870
HpySE526I ACGT 1 cut(s) 603
Hsp92II CATG 5 cut(s) 767, 821, 943, 972, 993
HspAI GCGC 1 cut(s) 801
Kzo9I GATC 1 cut(s) 441
LguI GCTCTTC 1 cut(s) 641
LmnI GCTCC 1 cut(s) 953
Lsp1109I GCAGC 2 cut(s) 11, 876
LweI GCATC 2 cut(s) 366, 761
MaeI CTAG 1 cut(s) 132
MaeII ACGT 1 cut(s) 603
MaeIII GTNAC 3 cut(s) 188, 290, 604
MalI GATC 1 cut(s) 443
MboI GATC 1 cut(s) 441
MflI RGATCY 1 cut(s) 441
MhlI GDGCHC 2 cut(s) 407, 570
MluCI AATT 8 cut(s) 17, 158, 210, 523, 529, 711, 841, 853
MlyI GAGTC 1 cut(s) 644
Mph1103I ATGCAT 1 cut(s) 991
MroXI GAANNNNTTC 1 cut(s) 8
MseI TTAA 2 cut(s) 146, 381
MspI CCGG 1 cut(s) 632
MspR9I CCNGG 4 cut(s) 167, 451, 632, 898
MvaI CCWGG 3 cut(s) 167, 451, 898
MwoI GCNNNNNNNGC 1 cut(s) 870
NciI CCSGG 1 cut(s) 632
NdeII GATC 1 cut(s) 441
NlaIII CATG 5 cut(s) 767, 821, 943, 972, 993
NlaIV GGNNCC 2 cut(s) 929, 949
NmeAIII GCCGAG 1 cut(s) 425
NmuCI GTSAC 3 cut(s) 188, 290, 604
NsiI ATGCAT 1 cut(s) 991
NspI RCATGY 2 cut(s) 972, 993
PaeI GCATGC 1 cut(s) 993
PagI TCATGA 1 cut(s) 939
PciSI GCTCTTC 1 cut(s) 641
PcsI WCGNNNNNNNCGW 1 cut(s) 744
PdmI GAANNNNTTC 1 cut(s) 8
PfeI GAWTC 3 cut(s) 53, 270, 622
PfoI TCCNGGA 1 cut(s) 630
PkrI GCNGC 2 cut(s) 26, 866
PleI GAGTC 1 cut(s) 643
PpsI GAGTC 1 cut(s) 643
Psp6I CCWGG 3 cut(s) 165, 449, 896
PspGI CCWGG 3 cut(s) 165, 449, 896
PspN4I GGNNCC 2 cut(s) 929, 949
PsuI RGATCY 1 cut(s) 441
RsaI GTAC 3 cut(s) 263, 780, 967
RsaNI GTAC 3 cut(s) 262, 779, 966
SapI GCTCTTC 1 cut(s) 641
SaqAI TTAA 2 cut(s) 146, 381
SatI GCNGC 2 cut(s) 25, 865
Sau3AI GATC 1 cut(s) 441
SchI GAGTC 1 cut(s) 644
ScrFI CCNGG 4 cut(s) 167, 451, 632, 898
SduI GDGCHC 2 cut(s) 407, 570
SfaNI GCATC 2 cut(s) 366, 761
SmlI CTYRAG 2 cut(s) 400, 506
SmoI CTYRAG 2 cut(s) 400, 506
SphI GCATGC 1 cut(s) 993
Sse9I AATT 8 cut(s) 17, 158, 210, 523, 529, 711, 841, 853
SspMI CTAG 1 cut(s) 132
StyD4I CCNGG 4 cut(s) 165, 449, 630, 896
StyI CCWWGG 1 cut(s) 248
TaaI ACNGT 3 cut(s) 183, 583, 965
TaiI ACGT 1 cut(s) 606
TaqI TCGA 1 cut(s) 783
TasI AATT 8 cut(s) 17, 158, 210, 523, 529, 711, 841, 853
TatI WGTACW 1 cut(s) 261
TfiI GAWTC 3 cut(s) 53, 270, 622
Tru1I TTAA 2 cut(s) 146, 381
Tru9I TTAA 2 cut(s) 146, 381
TscAI CASTG 1 cut(s) 880
TseFI GTSAC 3 cut(s) 188, 290, 604
TseI GCWGC 2 cut(s) 24, 864
Tsp45I GTSAC 3 cut(s) 188, 290, 604
TspDTI ATGAA 5 cut(s) 17, 363, 806, 894, 928
TspGWI ACGGA 1 cut(s) 422
TspRI CASTG 1 cut(s) 880
XagI CCTNNNNNAGG 1 cut(s) 509
XapI RAATTY 3 cut(s) 17, 158, 841
XceI RCATGY 2 cut(s) 972, 993
XcmI CCANNNNNNNNNTGG 1 cut(s) 665
XmnI GAANNNNTTC 1 cut(s) 8
XspI CTAG 1 cut(s) 132
Zsp2I ATGCAT 1 cut(s) 991
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.