Rw2G043840

Amino-acid acetyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0002453
Physical Location & Seq
Forward (+)
70379737 .. 70387253
7517 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G043840.1

Sequence Viewer

Length: 1377 bp
ATGACTTCGCAGCTCACCTTGTCGACCTCATCATTCTCCAAGCTGAAGTTCGTCAAGTCCCGACCTCCTTCTCCGACCCAAGCCGACTGGAGCCGCCTCCAATCTGACCCCGAGTCCCCGACCTCAGTCTCTGACCCCGATATTGCTTTTCTTCATCACCTGGGGATCAAGTTTGTTCTTGTTCCAGGGACCCATGTCGAAATCGATACCCTTTTGGCTCAGAGAAGCAAGAGTCCAAAGTTTGCTGGTCAGTATAGAGTGACCGACTCGGATTCTCTAACAGCTGCAAAGGAAGCTGCTGGGAAGATTTCCATGGATATAGAGGCAAAGCTTTCGCCCGGACCGTCGATATGCAATATTCGTCGGCATGGTGACAGTAGTCGTTGGCATGAAGTTGGCGTCAGTGTAGCTAGTGGTAACTTTCTTGCACCCAGGAGGAGAGGAGTCGTTGCTGGTGTTGATTATGGGGCAACAGGTGAAGTTAAGAAAGTGGATGTAGTTCGCATGCGAGAGAGGCTTGATGCGGGTTGTATTGTGCTATTGAGCAACCTTGGTTATTCGAGCTCTGGAGAAGTTTTAAATTGCAACACATATGAAGTTGCAACAGCTTGTTCCTTGGCTATTGGAGCAGATAAGCTTATCTGCATAATGGATGGTCCAATTCTTGATGAGAGTGGACGTCTGATTCGTTTCTTGACTCTTGAAGAAGCAGACAAGTTGATTCGTCAGCGGGCTAAGCAAAGTGAAATAGCCGCTAGCTATGTGAAAGCTGTTGATGAAGAAAATCTCCATTATCTTGGACATGATAGTGGGAATTTTCTTAAGGAAAAGCATATTCCAAGGTTTAACAATGGTGTTGGTTTTGAGAATGGCAATGGATTGTGTCGATTAAGCGGTTACCTTTCAGAATTGGCTGCCGCAGCCTTTGTTTATGGGAGAGTATCCGGAGTCCTGCTTGATTTTCTAGTACAGGAGTTTCTTTTGACTGATTTCATGTGCAGTAAATATGTTCAGGAGGAAGGATTTGCTGGAACAAGGCGTCATGTGGGTGCCTCATGCTTATTGAGGAAGAACTTGAAAATCTCAATTTGTTCCTTGTCCTTTGATCCTTTCATCACCGTTGCCTTCTTATATTTCCAAGTACTTTGTTGTTTTTCCTTACGCTGCGTATTCACCATGGTGAAATATCAAGACGTTTCGACCGTGATCAAGCAAGATGGAGATGGTGAGACTTCTCATGTACTACTAGAAGTTCTTTTCCTTTTGAGCTTATTCATTCTGATGTATGGGGACCTTCCCGTGAGTCAACCTTGTCTGGCAAACATTGGTTTGTTTTGTTTATTGATGATTATACCTGTCTTACTTGGGTCTCTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00220 ko01100 ko01110 ko01130 ko01210 ko01230 map00220 map01100 map01110 map01130 map01210 map01230
Pfam Domains
Protein Families
AA_kinase Acetyltransf_1

Protein Analysis

458

Amino Acids

50.13

Weight (kDa)

6.56

Isoelectric Point (pI)

39.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AA_kinase PF00696 47 - 247 2.5e-08 Amino acid kinase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 682
AccB1I GGYRCC 1 cut(s) 1049
AccI GTMKAC 1 cut(s) 23
AccIII TCCGGA 1 cut(s) 944
AciI CCGC 6 cut(s) 94, 524, 730, 753, 894, 918
AclWI GGATC 2 cut(s) 173, 1100
AcsI RAATTY 1 cut(s) 814
AcuI CTGAAG 1 cut(s) 65
AcyI GRCGYC 3 cut(s) 399, 679, 1039
AfaI GTAC 3 cut(s) 969, 1143, 1242
AflII CTTAAG 1 cut(s) 821
AgsI TTSAA 2 cut(s) 704, 1078
AhdI GACNNNNNGTC 1 cut(s) 112
AjnI CCWGG 3 cut(s) 159, 184, 431
AjuI GAANNNNNNNTTGG 2 cut(s) 32, 64
AleI CACNNNNGTG 1 cut(s) 1178
Alw21I GWGCWC 1 cut(s) 566
Alw26I GTCTC 2 cut(s) 133, 1223
AlwI GGATC 2 cut(s) 173, 1100
AlwNI CAGNNNCTG 1 cut(s) 131
Ama87I CYCGRG 1 cut(s) 110
Aor13HI TCCGGA 1 cut(s) 944
ApeKI GCWGC 6 cut(s) 10, 284, 296, 914, 920, 1164
ApoI RAATTY 1 cut(s) 814
ArsI GACNNNNNNTTYG 2 cut(s) 669, 701
AspS9I GGNCC 4 cut(s) 189, 341, 656, 1291
AsuC2I CCSGG 1 cut(s) 339
AsuHPI GGTGA 8 cut(s) 7, 149, 383, 488, 1108, 1165, 1192, 1238
AsuNHI GCTAGC 1 cut(s) 755
AvaI CYCGRG 1 cut(s) 110
AvaII GGWCC 4 cut(s) 189, 341, 656, 1291
BanI GGYRCC 1 cut(s) 1049
BanII GRGCYC 1 cut(s) 566
Bbv12I GWGCWC 1 cut(s) 566
BbvI GCAGC 6 cut(s) 22, 271, 283, 901, 932, 1151
BccI CCATC 3 cut(s) 647, 1211, 1217
BcgI CGANNNNNNTGC 2 cut(s) 315, 349
BciT130I CCWGG 3 cut(s) 161, 186, 433
BciVI GTATCC 1 cut(s) 952
BclI TGATCA 1 cut(s) 1206
BcnI CCSGG 1 cut(s) 339
BcoDI GTCTC 2 cut(s) 133, 1223
BfaI CTAG 4 cut(s) 411, 756, 965, 1247
BfrI CTTAAG 1 cut(s) 821
BfuI GTATCC 1 cut(s) 952
BisI GCNGC 9 cut(s) 11, 94, 285, 297, 753, 915, 918, 921, 1165
BlpI GCTNAGC 1 cut(s) 735
BlsI GCNGC 9 cut(s) 12, 95, 286, 298, 754, 916, 919, 922, 1166
BmcAI AGTACT 1 cut(s) 1143
Bme1390I CCNGG 4 cut(s) 161, 186, 339, 433
Bme18I GGWCC 4 cut(s) 189, 341, 656, 1291
BmeRI GACNNNNNGTC 1 cut(s) 112
BmeT110I CYCGRG 1 cut(s) 110
BmgT120I GGNCC 4 cut(s) 189, 341, 656, 1291
BmiI GGNNCC 5 cut(s) 92, 190, 191, 1051, 1292
BmrFI CCNGG 4 cut(s) 161, 186, 339, 433
BmsI GCATC 1 cut(s) 511
BmtI GCTAGC 1 cut(s) 759
BoxI GACNNNNGTC 3 cut(s) 125, 194, 378
BpmI CTGGAG 2 cut(s) 109, 588
Bpu1102I GCTNAGC 1 cut(s) 735
BpuMI CCSGG 1 cut(s) 339
Bsa29I ATCGAT 1 cut(s) 204
BsaHI GRCGYC 3 cut(s) 399, 679, 1039
BsaJI CCNNGG 8 cut(s) 160, 185, 312, 431, 550, 615, 839, 1176
BsaWI WCCGGW 1 cut(s) 944
Bse1I ACTGG 1 cut(s) 92
Bse3DI GCAATG 1 cut(s) 880
BseAI TCCGGA 1 cut(s) 944
BseBI CCWGG 3 cut(s) 161, 186, 433
BseCI ATCGAT 1 cut(s) 204
BseDI CCNNGG 8 cut(s) 160, 185, 312, 431, 550, 615, 839, 1176
BseGI GGATG 2 cut(s) 499, 658
BseMI GCAATG 1 cut(s) 880
BseMII CTCAG 2 cut(s) 138, 233
BseNI ACTGG 1 cut(s) 92
BseRI GAGGAG 2 cut(s) 451, 456
BseXI GCAGC 6 cut(s) 22, 271, 283, 901, 932, 1151
BseYI CCCAGC 1 cut(s) 299
BsgI GTGCAG 1 cut(s) 1018
Bsh1285I CGRYCG 1 cut(s) 1203
BshNI GGYRCC 1 cut(s) 1049
BshVI ATCGAT 1 cut(s) 204
BsiEI CGRYCG 1 cut(s) 1203
BsiHKAI GWGCWC 1 cut(s) 566
BsiHKCI CYCGRG 1 cut(s) 110
BsiSI CCGG 2 cut(s) 339, 945
BslFI GGGAC 4 cut(s) 43, 100, 202, 1304
BsmAI GTCTC 2 cut(s) 133, 1223
BsmFI GGGAC 4 cut(s) 43, 100, 202, 1304
BsoBI CYCGRG 1 cut(s) 110
Bsp1286I GDGCHC 1 cut(s) 566
Bsp13I TCCGGA 1 cut(s) 944
Bsp143I GATC 3 cut(s) 165, 1105, 1206
Bsp1720I GCTNAGC 1 cut(s) 735
Bsp19I CCATGG 2 cut(s) 312, 1176
BspACI CCGC 6 cut(s) 94, 524, 730, 753, 894, 918
BspCNI CTCAG 2 cut(s) 137, 232
BspDI ATCGAT 1 cut(s) 204
BspEI TCCGGA 1 cut(s) 944
BspLI GGNNCC 5 cut(s) 92, 190, 191, 1051, 1292
BspOI GCTAGC 1 cut(s) 759
BspPI GGATC 2 cut(s) 173, 1100
BspT107I GGYRCC 1 cut(s) 1049
BspTI CTTAAG 1 cut(s) 821
BsrDI GCAATG 1 cut(s) 880
BsrI ACTGG 1 cut(s) 92
BssECI CCNNGG 8 cut(s) 160, 185, 312, 431, 550, 615, 839, 1176
BssMI GATC 3 cut(s) 165, 1105, 1206
BssNI GRCGYC 3 cut(s) 399, 679, 1039
BssT1I CCWWGG 5 cut(s) 312, 550, 615, 839, 1176
Bst2UI CCWGG 3 cut(s) 161, 186, 433
Bst4CI ACNGT 4 cut(s) 345, 377, 1120, 1204
BstACI GRCGYC 3 cut(s) 399, 679, 1039
BstAFI CTTAAG 1 cut(s) 821
BstC8I GCNNGC 3 cut(s) 506, 732, 757
BstDEI CTNAG 3 cut(s) 124, 219, 735
BstDSI CCRYGG 2 cut(s) 312, 1176
BstEII GGTNACC 1 cut(s) 896
BstF5I GGATG 2 cut(s) 499, 658
BstKTI GATC 3 cut(s) 168, 1108, 1209
BstMAI GTCTC 2 cut(s) 133, 1223
BstMBI GATC 3 cut(s) 165, 1105, 1206
BstMCI CGRYCG 1 cut(s) 1203
BstMWI GCNNNNNNNGC 5 cut(s) 293, 514, 626, 736, 920
BstNI CCWGG 3 cut(s) 161, 186, 433
BstNSI RCATGY 1 cut(s) 508
BstPAI GACNNNNGTC 3 cut(s) 125, 194, 378
BstPI GGTNACC 1 cut(s) 896
BstSCI CCNGG 4 cut(s) 159, 184, 337, 431
BstV1I GCAGC 6 cut(s) 22, 271, 283, 901, 932, 1151
BstXI CCANNNNNNTGG 1 cut(s) 797
Bsu15I ATCGAT 1 cut(s) 204
BsuI GTATCC 1 cut(s) 952
BsuTUI ATCGAT 1 cut(s) 204
BtgI CCRYGG 2 cut(s) 312, 1176
BtsCI GGATG 2 cut(s) 499, 658
BtsIMutI CAGTG 1 cut(s) 409
Cac8I GCNNGC 3 cut(s) 506, 732, 757
CaiI CAGNNNCTG 1 cut(s) 131
Cfr13I GGNCC 4 cut(s) 189, 341, 656, 1291
ClaI ATCGAT 1 cut(s) 204
CpoI CGGWCCG 1 cut(s) 341
CseI GACGC 2 cut(s) 388, 1028
Csp6I GTAC 3 cut(s) 968, 1142, 1241
CspI CGGWCCG 1 cut(s) 341
CviQI GTAC 3 cut(s) 968, 1142, 1241
DdeI CTNAG 3 cut(s) 124, 219, 735
DpnI GATC 3 cut(s) 167, 1107, 1208
DpnII GATC 3 cut(s) 165, 1105, 1206
DraI TTTAAA 1 cut(s) 579
DriI GACNNNNNGTC 1 cut(s) 112
Eam1105I GACNNNNNGTC 1 cut(s) 112
Ecl136II GAGCTC 1 cut(s) 564
Eco130I CCWWGG 5 cut(s) 312, 550, 615, 839, 1176
Eco24I GRGCYC 1 cut(s) 566
Eco47I GGWCC 4 cut(s) 189, 341, 656, 1291
Eco53kI GAGCTC 1 cut(s) 564
Eco57I CTGAAG 1 cut(s) 65
Eco88I CYCGRG 1 cut(s) 110
Eco91I GGTNACC 1 cut(s) 896
EcoICRI GAGCTC 1 cut(s) 564
EcoO109I RGGNCCY 2 cut(s) 189, 1291
EcoO65I GGTNACC 1 cut(s) 896
EcoRII CCWGG 3 cut(s) 159, 184, 431
EcoT14I CCWWGG 5 cut(s) 312, 550, 615, 839, 1176
EcoT38I GRGCYC 1 cut(s) 566
ErhI CCWWGG 5 cut(s) 312, 550, 615, 839, 1176
FaqI GGGAC 4 cut(s) 43, 100, 202, 1304
FauI CCCGC 2 cut(s) 517, 723
FauNDI CATATG 1 cut(s) 592
FbaI TGATCA 1 cut(s) 1206
FblI GTMKAC 1 cut(s) 23
Fnu4HI GCNGC 9 cut(s) 11, 94, 285, 297, 753, 915, 918, 921, 1165
FokI GGATG 2 cut(s) 506, 665
FriOI GRGCYC 1 cut(s) 566
Fsp4HI GCNGC 9 cut(s) 11, 94, 285, 297, 753, 915, 918, 921, 1165
FspBI CTAG 4 cut(s) 411, 756, 965, 1247
GluI GCNGC 9 cut(s) 11, 94, 285, 297, 753, 915, 918, 921, 1165
GsaI CCCAGC 1 cut(s) 303
GsuI CTGGAG 2 cut(s) 109, 588
HapII CCGG 2 cut(s) 339, 945
HgaI GACGC 2 cut(s) 388, 1028
Hin1I GRCGYC 3 cut(s) 399, 679, 1039
HincII GTYRAC 2 cut(s) 24, 1307
HindII GTYRAC 2 cut(s) 24, 1307
HindIII AAGCTT 2 cut(s) 329, 635
HpaII CCGG 2 cut(s) 339, 945
HphI GGTGA 8 cut(s) 7, 149, 383, 488, 1108, 1165, 1192, 1238
Hpy166II GTNNAC 3 cut(s) 24, 677, 1307
Hpy188I TCNGA 8 cut(s) 75, 106, 133, 222, 271, 684, 907, 1281
Hpy188III TCNNGA 8 cut(s) 60, 567, 665, 694, 701, 945, 1013, 1190
Hpy8I GTNNAC 3 cut(s) 24, 677, 1307
Hpy99I CGWCG 2 cut(s) 349, 366
HpyAV CCTTC 4 cut(s) 78, 1013, 1135, 1304
HpyCH4III ACNGT 4 cut(s) 345, 377, 1120, 1204
HpyCH4IV ACGT 2 cut(s) 679, 1194
HpyCH4V TGCA 7 cut(s) 287, 354, 428, 585, 602, 645, 999
HpyF10VI GCNNNNNNNGC 5 cut(s) 293, 514, 626, 736, 920
HpyF3I CTNAG 3 cut(s) 124, 219, 735
HpySE526I ACGT 2 cut(s) 679, 1194
Hsp92I GRCGYC 3 cut(s) 399, 679, 1039
KflI GGGWCCC 1 cut(s) 189
Kpn2I TCCGGA 1 cut(s) 944
Ksp22I TGATCA 1 cut(s) 1206
Kzo9I GATC 3 cut(s) 165, 1105, 1206
LmnI GCTCC 2 cut(s) 90, 626
Lsp1109I GCAGC 6 cut(s) 22, 271, 283, 901, 932, 1151
LweI GCATC 1 cut(s) 511
MaeI CTAG 4 cut(s) 411, 756, 965, 1247
MaeII ACGT 2 cut(s) 679, 1194
MaeIII GTNAC 4 cut(s) 259, 371, 416, 896
MalI GATC 3 cut(s) 167, 1107, 1208
MboI GATC 3 cut(s) 165, 1105, 1206
MboII GAAGA 5 cut(s) 143, 316, 716, 791, 1081
MhlI GDGCHC 1 cut(s) 566
MluCI AATT 5 cut(s) 580, 660, 814, 908, 1086
MlyI GAGTC 7 cut(s) 122, 241, 260, 453, 691, 957, 1312
MmeI TCCRAC 1 cut(s) 98
MroI TCCGGA 1 cut(s) 944
MseI TTAA 6 cut(s) 483, 578, 822, 846, 890, 1375
MslI CAYNNNNRTG 4 cut(s) 807, 1047, 1178, 1280
MspA1I CMGCKG 2 cut(s) 284, 730
MspCI CTTAAG 1 cut(s) 821
MspI CCGG 2 cut(s) 339, 945
MspR9I CCNGG 4 cut(s) 161, 186, 339, 433
MvaI CCWGG 3 cut(s) 161, 186, 433
MwoI GCNNNNNNNGC 5 cut(s) 293, 514, 626, 736, 920
NciI CCSGG 1 cut(s) 339
NcoI CCATGG 2 cut(s) 312, 1176
NdeI CATATG 1 cut(s) 592
NdeII GATC 3 cut(s) 165, 1105, 1206
NheI GCTAGC 1 cut(s) 755
NlaIV GGNNCC 5 cut(s) 92, 190, 191, 1051, 1292
NmuCI GTSAC 2 cut(s) 259, 371
NspI RCATGY 1 cut(s) 508
OliI CACNNNNGTG 1 cut(s) 1178
PaeI GCATGC 1 cut(s) 508
PcsI WCGNNNNNNNCGW 3 cut(s) 341, 685, 1200
PfeI GAWTC 3 cut(s) 272, 685, 721
PkrI GCNGC 9 cut(s) 12, 95, 286, 298, 754, 916, 919, 922, 1166
PleI GAGTC 7 cut(s) 121, 240, 260, 452, 691, 956, 1311
PpsI GAGTC 7 cut(s) 121, 240, 260, 452, 691, 956, 1311
PpuMI RGGWCCY 2 cut(s) 189, 1291
PshAI GACNNNNGTC 3 cut(s) 125, 194, 378
Psp124BI GAGCTC 1 cut(s) 566
Psp5II RGGWCCY 2 cut(s) 189, 1291
Psp6I CCWGG 3 cut(s) 159, 184, 431
PspEI GGTNACC 1 cut(s) 896
PspFI CCCAGC 1 cut(s) 299
PspGI CCWGG 3 cut(s) 159, 184, 431
PspN4I GGNNCC 5 cut(s) 92, 190, 191, 1051, 1292
PspPI GGNCC 4 cut(s) 189, 341, 656, 1291
PspPPI RGGWCCY 2 cut(s) 189, 1291
PstNI CAGNNNCTG 1 cut(s) 131
PvuII CAGCTG 1 cut(s) 284
RsaI GTAC 3 cut(s) 969, 1143, 1242
RsaNI GTAC 3 cut(s) 968, 1142, 1241
RseI CAYNNNNRTG 4 cut(s) 807, 1047, 1178, 1280
Rsr2I CGGWCCG 1 cut(s) 341
RsrII CGGWCCG 1 cut(s) 341
SacI GAGCTC 1 cut(s) 566
SalI GTCGAC 1 cut(s) 22
SaqAI TTAA 6 cut(s) 483, 578, 822, 846, 890, 1375
SatI GCNGC 9 cut(s) 11, 94, 285, 297, 753, 915, 918, 921, 1165
Sau3AI GATC 3 cut(s) 165, 1105, 1206
Sau96I GGNCC 4 cut(s) 189, 341, 656, 1291
ScaI AGTACT 1 cut(s) 1143
SchI GAGTC 7 cut(s) 122, 241, 260, 453, 691, 957, 1312
ScrFI CCNGG 4 cut(s) 161, 186, 339, 433
SduI GDGCHC 1 cut(s) 566
SfaNI GCATC 1 cut(s) 511
SinI GGWCC 4 cut(s) 189, 341, 656, 1291
SmiMI CAYNNNNRTG 4 cut(s) 807, 1047, 1178, 1280
SmlI CTYRAG 1 cut(s) 821
SmoI CTYRAG 1 cut(s) 821
SphI GCATGC 1 cut(s) 508
Sse9I AATT 5 cut(s) 580, 660, 814, 908, 1086
SsiI CCGC 6 cut(s) 94, 524, 730, 753, 894, 918
SspI AATATT 1 cut(s) 358
SspMI CTAG 4 cut(s) 411, 756, 965, 1247
SstI GAGCTC 1 cut(s) 566
StyD4I CCNGG 4 cut(s) 159, 184, 337, 431
StyI CCWWGG 5 cut(s) 312, 550, 615, 839, 1176
TaaI ACNGT 4 cut(s) 345, 377, 1120, 1204
TaiI ACGT 2 cut(s) 682, 1197
TaqI TCGA 7 cut(s) 23, 198, 204, 347, 560, 886, 1199
TaqII GACCGA 1 cut(s) 278
TasI AATT 5 cut(s) 580, 660, 814, 908, 1086
TatI WGTACW 3 cut(s) 967, 1141, 1240
TauI GCSGC 3 cut(s) 96, 755, 920
TfiI GAWTC 3 cut(s) 272, 685, 721
Tru1I TTAA 6 cut(s) 483, 578, 822, 846, 890, 1375
Tru9I TTAA 6 cut(s) 483, 578, 822, 846, 890, 1375
TscAI CASTG 1 cut(s) 409
TseFI GTSAC 2 cut(s) 259, 371
TseI GCWGC 6 cut(s) 10, 284, 296, 914, 920, 1164
Tsp45I GTSAC 2 cut(s) 259, 371
TspDTI ATGAA 7 cut(s) 143, 405, 609, 792, 982, 1102, 1264
TspRI CASTG 1 cut(s) 409
Vha464I CTTAAG 1 cut(s) 821
VpaK11BI GGWCC 4 cut(s) 189, 341, 656, 1291
XapI RAATTY 1 cut(s) 814
XceI RCATGY 1 cut(s) 508
XmiI GTMKAC 1 cut(s) 23
XspI CTAG 4 cut(s) 411, 756, 965, 1247
ZraI GACGTC 1 cut(s) 680
ZrmI AGTACT 1 cut(s) 1143
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.