Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005002.1

Orthogroup ID

OG0007959

Physical Location & Seq

Genomic Coordinates Reverse (-)

95 .. 8178

Gene Structure 8084 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0005002.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3054 bp

atggagacccttctgggtcgagcgctggagtatactctcaagtactggctcaaatccttctccagagaccagttcaagtggcagggacggacggttcagctttccaatttagatatggacggcgatgctttgcactccagcatgggattaccgccggcgctgcacgtgaccacggccagagtcggcaaacttgtgatagtgctcccatcatcgttgagcaatgttcaagtggaaccgatagtagtgcagattgacaagctggatttggttttagaggagaattcggagttggatgcgagaaacagtcctagcagttcgccatcatccactagctccgggaaaggaagtggttatggatttgctgataagattgcagatggaatgactatagagattcacacagttaatcttctacttgaaacttgtgggggtggtcgccaaggaggggcagcttgggcatctcctctggcttctatcactatacacaaccttttgctgtattctactaatgaaaattggcaggtagtaaatcttaaggaagcgcgggagttctccaccaacaaaaagttcatttatgttttcaaaaaacttgagtgggaatctttgtccatcgatctcctgcctcaccctgatatgttcacggatgctaatatagcgagcactcaaaatggaggaacccagagagatgatgatggtgcgaagcgagctttctttggtggggagcgctttatagaaggaatttcaggagaagcttatatcacagtgcaaaggactgaattaaatagtccactcgggcttgaggttcagttacatatcacagaagccatttgtcctgcaataagtgaaccaggactacgtgctcttctccgctttatgactggattatatgtctgtctgaatagaggagatgttgattcaaatactcagcagcggtcaactgaagcagcaggccgttctatcgtttcaattgttgtagatcacatatttctctgcattaaagatactgaattcaagcttgaacttttgatgcagtcactcttcttttcacggacaagtgtttctgatggagaaattgacaataacttgtctaaggttatgattggtgggctctttttaagggatacctattcaagacctccttgcaccttagtgcaaccatcaatggatgccatttccgacgaacctgtgcatgttcctgactttggtaaggacttttgccctcccatatatcctttgggagctcagcagtggcagttgatcgtgggtgtccctcttttatgccttcattctcttcagaccaagccctcccctgtgcctccagcttttgctacacaaacagtcattaattgccaacccctgatgcatcaactggttgaccttcccagagacagaagcaagaagaaatggactaccacagcatcacaccttactttgtctctcgaaacgtgtactgcatcagctggacttcagagttctcttgatgggacctcaggcttgtggagatgtgttgagctgaaagatgcttgcatagaagtagctatggtaactgctgatgggagcccattaacaaatgttcctcctcctggtggtattgtcaggatagggctagcttgtgaaaagtatctctcaaatacttctgttgaacagttgtattttgttttggatctttatgcgtactttggcagagttagtgaaaagatagttcttgttggaaaatatactagaccaaagacgagtacggatgatacgttcaaggggaagctaattgacaaggttcccaatgatacagcagttagtttaatggtgaataatcttcagctacgatttctggaatcatcttccatgcatgttgaaggaacgcctctagttcagtttgttgggcatgatctctttataagagttactcacagaactcttggtggtgcagttgctgtttcctccattatacgttgggatagcgttgaggtggactgtatagacagtgagggaaacttggcatctgagaatggcagagatttaatttctattgaaaatggtcatggtgttttggcgagtggaaatgggtatcctcaactaagacctgtcttttggatagatagccaaataaaccattcatcaaatggtaaagctattgtagatcgatttcttgacataaacgtggaacatgtaattcctttaaatgaacaagatgtagagtgtcacagtttgaatgtgtcagcttgtatttctggcattcgcctaggtggcggaatgaactatgctgaatccttgctgcatcgctttggaatacttgaggctgatggtggtcctgggaaggggctatctaaagagttggagaatttacgagcaggccccctttcaaaaatttttgaaccatcacctttcattgttgattcaaaagaggatggaagttcaggagatgggaaagagagtgaggttttgcacttgggaaagccagatgatgtgaacgtgtccatagaattgaaaaattggttatttgctcttgaaggcgcacaggaaatggcagtgtttagaagttcctccaatcaggagggtgatagcagagaagagaggtcttggcacacaacattccacaatctgcacctaaaaggaaaaagccgtccaaaacaagtgatgaatggcattagaaagtcatactggacgccaaaatatcctttagaattggtgacggttggtgtggaaggcttgcagatattgaagccacatgcccataactatcataatcctgctatcttacatgtgaatgggaccaaggaatctgcaggtgtaaatctggaacttcgcctggtgacaatggaggacagtgttgatcatgaaatggtggaatgggtagtagaaaatgtgaaattttctgttgagcaaccgattgaggcagttgtatctaaggatgagctgcaacatcttgttttattgtgcaagtcggaagttgactcaatgggtcgaataacagctggaattctgcggctatttaagttggaggagaccataggccaggctgctatggatcaactgaccaaccttggtatttactaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Chorein_N

Protein Analysis

1017

Amino Acids

111.82

Weight (kDa)

5.34

Isoelectric Point (pI)

38.67

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007959)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G20720 AT3G20720
fragaria_vesca	FvH4_3g21780 FvH4_3g21780 FvH4_3g21780 FvH4_3g21780 FvH4_3g21780 FvH4_3g21780
malus_domestica	MD03G1211800.v1.1 MD11G1227200.v1.1
prunus_persica	Prupe.4G202100_v2.0.a1
pyrus_communis	pycom03g16050 pycom11g19980
rosa_chinensis	RchiOBHm_Chr5g0037331
rosa_laevigata	RLG00000033774
rosa_multiflora	Rmu_co8408591.1_g000001 Rmu_sc0005002.1_g000001
rosa_roxburghii	Rroxscaffold_1G00043640
rosa_rugosa	Rorug05G0164100
rosa_samantha	Rh5AG253800 Rh5BG255800 Rh5CG288900 Rh5DG264200
rosa_wichuraiana	Rw5G023490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1895
AarI	CACCTGC	1 cut(s)	2774
Acc36I	ACCTGC	2 cut(s)	511, 2774
AccI	GTMKAC	1 cut(s)	32
AccII	CGCG	1 cut(s)	544
AciI	CCGC	6 cut(s)	152, 544, 868, 931, 2247, 2983
AclWI	GGATC	2 cut(s)	1671, 3033
AcoI	YGGCCR	1 cut(s)	174
AcsI	RAATTY	7 cut(s)	280, 738, 1007, 2338, 2364, 2867, 2976
AcuI	CTGAAG	4 cut(s)	960, 1277, 1451, 1799
AcvI	CACGTG	1 cut(s)	166
AcyI	GRCGYC	1 cut(s)	2663
AfaI	GTAC	4 cut(s)	44, 1450, 1676, 1738
AfeI	AGCGCT	2 cut(s)	24, 725
AfiI	CCNNNNNNNGG	5 cut(s)	445, 1202, 1583, 1586, 2315
AflII	CTTAAG	1 cut(s)	533
AflIII	ACRYGT	4 cut(s)	1445, 2164, 2469, 2758
AjnI	CCWGG	5 cut(s)	847, 1582, 2308, 2805, 3012
AjuI	GAANNNNNNNTTGG	4 cut(s)	272, 304, 551, 583
AleI	CACNNNNGTG	1 cut(s)	1148
AloI	GAACNNNNNNTCC	4 cut(s)	78, 110, 1733, 1765
Alw21I	GWGCWC	4 cut(s)	204, 662, 862, 1243
Alw26I	GTCTC	4 cut(s)	60, 1380, 1440, 2996
AlwI	GGATC	2 cut(s)	1671, 3033
AlwNI	CAGNNNCTG	1 cut(s)	1931
Ama87I	CYCGRG	1 cut(s)	791
Aor51HI	AGCGCT	2 cut(s)	24, 725
AoxI	GGCC	4 cut(s)	174, 949, 2350, 3010
ApeKI	GCWGC	7 cut(s)	160, 449, 928, 944, 2272, 2914, 3017
ApoI	RAATTY	7 cut(s)	280, 738, 1007, 2338, 2364, 2867, 2976
ArsI	GACNNNNNNTTYG	2 cut(s)	2070, 2102
AseI	ATTAAT	1 cut(s)	1344
AspA2I	CCTAGG	1 cut(s)	2239
AspLEI	GCGC	5 cut(s)	25, 160, 544, 726, 2513
AspS9I	GGNCC	4 cut(s)	1485, 2306, 2351, 2769
AsuC2I	CCSGG	1 cut(s)	337
AsuHPI	GGTGA	6 cut(s)	617, 1816, 2370, 2567, 2698, 2821
AsuNHI	GCTAGC	1 cut(s)	1606
AvaI	CYCGRG	1 cut(s)	791
AvaII	GGWCC	3 cut(s)	1485, 2306, 2769
AvrII	CCTAGG	1 cut(s)	2239
AxyI	CCTNAGG	1 cut(s)	1489
BaeI	ACNNNNGTAYC	2 cut(s)	1776, 1809
BanII	GRGCYC	3 cut(s)	1110, 1243, 1562
BbrPI	CACGTG	1 cut(s)	166
Bbv12I	GWGCWC	4 cut(s)	204, 662, 862, 1243
BbvI	GCAGC	7 cut(s)	147, 461, 940, 956, 2259, 2901, 3004
BceAI	ACGGC	4 cut(s)	136, 189, 936, 2604
BcgI	CGANNNNNNTGC	2 cut(s)	226, 260
BciT130I	CCWGG	5 cut(s)	849, 1584, 2310, 2807, 3014
BciVI	GTATCC	2 cut(s)	1114, 2076
BclI	TGATCA	1 cut(s)	2830
BcnI	CCSGG	1 cut(s)	337
BcoDI	GTCTC	4 cut(s)	60, 1380, 1440, 2996
BfaI	CTAG	6 cut(s)	309, 330, 1607, 1722, 1865, 2240
BfmI	CTRYAG	2 cut(s)	387, 2781
BfoI	RGCGCY	3 cut(s)	26, 161, 727
BfrI	CTTAAG	1 cut(s)	533
BfuAI	ACCTGC	2 cut(s)	511, 2774
BfuI	GTATCC	2 cut(s)	1114, 2076
BglI	GCCNNNNNGGC	1 cut(s)	2244
BisI	GCNGC	8 cut(s)	161, 450, 929, 945, 2273, 2915, 2984, 3018
BlnI	CCTAGG	1 cut(s)	2239
BlpI	GCTNAGC	1 cut(s)	1242
BlsI	GCNGC	8 cut(s)	162, 451, 930, 946, 2274, 2916, 2985, 3019
BmcAI	AGTACT	1 cut(s)	44
Bme1390I	CCNGG	6 cut(s)	337, 849, 1584, 2310, 2807, 3014
Bme18I	GGWCC	3 cut(s)	1485, 2306, 2769
BmeT110I	CYCGRG	1 cut(s)	791
BmgT120I	GGNCC	4 cut(s)	1485, 2306, 2351, 2769
BmiI	GGNNCC	7 cut(s)	234, 676, 1486, 1559, 1776, 2353, 2770
BmrFI	CCNGG	6 cut(s)	337, 849, 1584, 2310, 2807, 3014
BmtI	GCTAGC	1 cut(s)	1610
BpmI	CTGGAG	4 cut(s)	46, 47, 121, 1302
Bpu1102I	GCTNAGC	1 cut(s)	1242
BpuEI	CTTGAG	4 cut(s)	23, 611, 818, 2312
BpuMI	CCSGG	1 cut(s)	337
Bsa29I	ATCGAT	2 cut(s)	612, 2140
BsaAI	YACGTR	2 cut(s)	166, 857
BsaHI	GRCGYC	1 cut(s)	2663
BsaI	GGTCTC	2 cut(s)	60, 2996
BsaJI	CCNNGG	6 cut(s)	171, 439, 2239, 2309, 2772, 3040
Bsc4I	CCNNNNNNNGG	5 cut(s)	445, 1202, 1583, 1586, 2315
Bse118I	RCCGGY	1 cut(s)	154
Bse1I	ACTGG	5 cut(s)	50, 70, 883, 1374, 2663
Bse21I	CCTNAGG	1 cut(s)	1489
Bse3DI	GCAATG	1 cut(s)	226
BseBI	CCWGG	5 cut(s)	849, 1584, 2310, 2807, 3014
BseCI	ATCGAT	2 cut(s)	612, 2140
BseDI	CCNNGG	6 cut(s)	171, 439, 2239, 2309, 2772, 3040
BseGI	GGATG	7 cut(s)	298, 323, 649, 1171, 1747, 2410, 2914
BseLI	CCNNNNNNNGG	5 cut(s)	445, 1202, 1583, 1586, 2315
BseMI	GCAATG	1 cut(s)	226
BseMII	CTCAG	4 cut(s)	938, 1256, 1503, 1992
BseNI	ACTGG	5 cut(s)	50, 70, 883, 1374, 2663
BseRI	GAGGAG	5 cut(s)	290, 453, 918, 1569, 3014
BseXI	GCAGC	7 cut(s)	147, 461, 940, 956, 2259, 2901, 3004
BsgI	GTGCAG	4 cut(s)	146, 266, 1944, 2585
Bsh1236I	CGCG	1 cut(s)	544
BshFI	GGCC	4 cut(s)	176, 951, 2352, 3012
BshVI	ATCGAT	2 cut(s)	612, 2140
BsiHKAI	GWGCWC	4 cut(s)	204, 662, 862, 1243
BsiHKCI	CYCGRG	1 cut(s)	791
BsiSI	CCGG	2 cut(s)	155, 336
BslFI	GGGAC	4 cut(s)	99, 1253, 1498, 2782
BslI	CCNNNNNNNGG	5 cut(s)	445, 1202, 1583, 1586, 2315
BsmAI	GTCTC	4 cut(s)	60, 1380, 1440, 2996
BsmFI	GGGAC	4 cut(s)	99, 1253, 1498, 2782
BsmI	GAATGC	1 cut(s)	2232
BsnI	GGCC	4 cut(s)	176, 951, 2352, 3012
Bso31I	GGTCTC	2 cut(s)	60, 2996
BsoBI	CYCGRG	1 cut(s)	791
Bsp1286I	GDGCHC	6 cut(s)	204, 662, 862, 1110, 1243, 1562
Bsp143I	GATC	8 cut(s)	613, 976, 1257, 1663, 1885, 2137, 2830, 3025
Bsp1720I	GCTNAGC	1 cut(s)	1242
BspACI	CCGC	6 cut(s)	152, 544, 868, 931, 2247, 2983
BspANI	GGCC	4 cut(s)	176, 951, 2352, 3012
BspCNI	CTCAG	4 cut(s)	937, 1255, 1502, 1993
BspDI	ATCGAT	2 cut(s)	612, 2140
BspFNI	CGCG	1 cut(s)	544
BspHI	TCATGA	1 cut(s)	2833
BspLI	GGNNCC	7 cut(s)	234, 676, 1486, 1559, 1776, 2353, 2770
BspMAI	CTGCAG	1 cut(s)	2785
BspMI	ACCTGC	2 cut(s)	511, 2774
BspOI	GCTAGC	1 cut(s)	1610
BspPI	GGATC	2 cut(s)	1671, 3033
BspQI	GCTCTTC	1 cut(s)	867
BspTI	CTTAAG	1 cut(s)	533
BspTNI	GGTCTC	2 cut(s)	60, 2996
BsrDI	GCAATG	1 cut(s)	226
BsrFI	RCCGGY	1 cut(s)	154
BsrI	ACTGG	5 cut(s)	50, 70, 883, 1374, 2663
BssAI	RCCGGY	1 cut(s)	154
BssECI	CCNNGG	6 cut(s)	171, 439, 2239, 2309, 2772, 3040
BssMI	GATC	8 cut(s)	613, 976, 1257, 1663, 1885, 2137, 2830, 3025
BssNAI	GTATAC	1 cut(s)	33
BssNI	GRCGYC	1 cut(s)	2663
BssT1I	CCWWGG	4 cut(s)	439, 2239, 2772, 3040
Bst1107I	GTATAC	1 cut(s)	33
Bst2UI	CCWGG	5 cut(s)	849, 1584, 2310, 2807, 3014
Bst6I	CTCTTC	4 cut(s)	867, 1043, 1296, 2562
BstACI	GRCGYC	1 cut(s)	2663
BstAFI	CTTAAG	1 cut(s)	533
BstBAI	YACGTR	2 cut(s)	166, 857
BstC8I	GCNNGC	8 cut(s)	156, 658, 705, 949, 1525, 1608, 2350, 2708
BstDEI	CTNAG	8 cut(s)	924, 1089, 1147, 1242, 1489, 2001, 2075, 2904
BstDSI	CCRYGG	1 cut(s)	171
BstF5I	GGATG	7 cut(s)	298, 323, 649, 1171, 1747, 2410, 2914
BstFNI	CGCG	1 cut(s)	544
BstH2I	RGCGCY	3 cut(s)	26, 161, 727
BstHHI	GCGC	5 cut(s)	25, 160, 544, 726, 2513
BstKTI	GATC	8 cut(s)	616, 979, 1260, 1666, 1888, 2140, 2833, 3028
BstMAI	GTCTC	4 cut(s)	60, 1380, 1440, 2996
BstMBI	GATC	8 cut(s)	613, 976, 1257, 1663, 1885, 2137, 2830, 3025
BstMWI	GCNNNNNNNGC	5 cut(s)	160, 455, 653, 704, 2244
BstNI	CCWGG	5 cut(s)	849, 1584, 2310, 2807, 3014
BstNSI	RCATGY	5 cut(s)	1193, 1850, 2168, 2729, 2762
BstSCI	CCNGG	6 cut(s)	335, 847, 1582, 2308, 2805, 3012
BstSFI	CTRYAG	2 cut(s)	387, 2781
BstUI	CGCG	1 cut(s)	544
BstV1I	GCAGC	7 cut(s)	147, 461, 940, 956, 2259, 2901, 3004
BstX2I	RGATCY	1 cut(s)	1663
BstYI	RGATCY	1 cut(s)	1663
BstZ17I	GTATAC	1 cut(s)	33
Bsu15I	ATCGAT	2 cut(s)	612, 2140
Bsu36I	CCTNAGG	1 cut(s)	1489
BsuI	GTATCC	2 cut(s)	1114, 2076
BsuRI	GGCC	4 cut(s)	176, 951, 2352, 3012
BsuTUI	ATCGAT	2 cut(s)	612, 2140
BtgI	CCRYGG	1 cut(s)	171
BtgZI	GCGATG	2 cut(s)	138, 2261
BtsCI	GGATG	7 cut(s)	298, 323, 649, 1171, 1747, 2410, 2914
BtsI	GCAGTG	2 cut(s)	1253, 2532
BtsIMutI	CAGTG	5 cut(s)	768, 1253, 1987, 2532, 2830
BveI	ACCTGC	2 cut(s)	511, 2774
Cac8I	GCNNGC	8 cut(s)	156, 658, 705, 949, 1525, 1608, 2350, 2708
CaiI	CAGNNNCTG	1 cut(s)	1931
CciI	TCATGA	1 cut(s)	2833
CfoI	GCGC	5 cut(s)	25, 160, 544, 726, 2513
Cfr10I	RCCGGY	1 cut(s)	154
Cfr13I	GGNCC	4 cut(s)	1485, 2306, 2351, 2769
ClaI	ATCGAT	2 cut(s)	612, 2140
CseI	GACGC	1 cut(s)	2671
Csp6I	GTAC	4 cut(s)	43, 1449, 1675, 1737
CviQI	GTAC	4 cut(s)	43, 1449, 1675, 1737
DdeI	CTNAG	8 cut(s)	924, 1089, 1147, 1242, 1489, 2001, 2075, 2904
DpnI	GATC	8 cut(s)	615, 978, 1259, 1665, 1887, 2139, 2832, 3027
DpnII	GATC	8 cut(s)	613, 976, 1257, 1663, 1885, 2137, 2830, 3025
DraI	TTTAAA	1 cut(s)	2178
EaeI	YGGCCR	1 cut(s)	174
Eam1104I	CTCTTC	4 cut(s)	867, 1043, 1296, 2562
EarI	CTCTTC	4 cut(s)	867, 1043, 1296, 2562
EciI	GGCGGA	1 cut(s)	2262
Ecl136II	GAGCTC	1 cut(s)	1241
Eco130I	CCWWGG	4 cut(s)	439, 2239, 2772, 3040
Eco24I	GRGCYC	3 cut(s)	1110, 1243, 1562
Eco31I	GGTCTC	2 cut(s)	60, 2996
Eco47I	GGWCC	3 cut(s)	1485, 2306, 2769
Eco47III	AGCGCT	2 cut(s)	24, 725
Eco53kI	GAGCTC	1 cut(s)	1241
Eco57I	CTGAAG	4 cut(s)	960, 1277, 1451, 1799
Eco72I	CACGTG	1 cut(s)	166
Eco81I	CCTNAGG	1 cut(s)	1489
Eco88I	CYCGRG	1 cut(s)	791
EcoICRI	GAGCTC	1 cut(s)	1241
EcoO109I	RGGNCCY	2 cut(s)	1485, 2351
EcoRI	GAATTC	3 cut(s)	280, 1007, 2976
EcoRII	CCWGG	5 cut(s)	847, 1582, 2308, 2805, 3012
EcoT14I	CCWWGG	4 cut(s)	439, 2239, 2772, 3040
EcoT22I	ATGCAT	2 cut(s)	1365, 1848
EcoT38I	GRGCYC	3 cut(s)	1110, 1243, 1562
ErhI	CCWWGG	4 cut(s)	439, 2239, 2772, 3040
FalI	AAGNNNNNCTT	2 cut(s)	1123, 1155
FaqI	GGGAC	4 cut(s)	99, 1253, 1498, 2782
FauI	CCCGC	1 cut(s)	537
FbaI	TGATCA	1 cut(s)	2830
FblI	GTMKAC	1 cut(s)	32
Fnu4HI	GCNGC	8 cut(s)	161, 450, 929, 945, 2273, 2915, 2984, 3018
FokI	GGATG	7 cut(s)	305, 310, 656, 1178, 1754, 2417, 2921
FriOI	GRGCYC	3 cut(s)	1110, 1243, 1562
Fsp4HI	GCNGC	8 cut(s)	161, 450, 929, 945, 2273, 2915, 2984, 3018
FspBI	CTAG	6 cut(s)	309, 330, 1607, 1722, 1865, 2240
GlaI	GCGC	5 cut(s)	24, 159, 543, 725, 2512
GluI	GCNGC	8 cut(s)	161, 450, 929, 945, 2273, 2915, 2984, 3018
GsuI	CTGGAG	4 cut(s)	46, 47, 121, 1302
HaeII	RGCGCY	3 cut(s)	26, 161, 727
HaeIII	GGCC	4 cut(s)	176, 951, 2352, 3012
HapII	CCGG	2 cut(s)	155, 336
HgaI	GACGC	1 cut(s)	2671
HhaI	GCGC	5 cut(s)	25, 160, 544, 726, 2513
Hin1I	GRCGYC	1 cut(s)	2663
Hin6I	GCGC	5 cut(s)	23, 158, 542, 724, 2511
HinP1I	GCGC	5 cut(s)	23, 158, 542, 724, 2511
HincII	GTYRAC	3 cut(s)	936, 1375, 2950
HindII	GTYRAC	3 cut(s)	936, 1375, 2950
HindIII	AAGCTT	2 cut(s)	750, 1013
HinfI	GANTC	9 cut(s)	180, 394, 599, 914, 1832, 2264, 2393, 2777, 2951
HpaII	CCGG	2 cut(s)	155, 336
HphI	GGTGA	6 cut(s)	617, 1816, 2370, 2567, 2698, 2821
Hpy188I	TCNGA	8 cut(s)	286, 897, 1063, 1177, 1296, 1470, 2002, 2944
Hpy99I	CGWCG	1 cut(s)	1181
HpyAV	CCTTC	9 cut(s)	20, 67, 728, 1292, 1388, 1847, 2308, 2501, 2696
HpyCH4IV	ACGT	7 cut(s)	165, 856, 1445, 1748, 1948, 2157, 2469
HpyF10VI	GCNNNNNNNGC	5 cut(s)	160, 455, 653, 704, 2244
HpyF3I	CTNAG	8 cut(s)	924, 1089, 1147, 1242, 1489, 2001, 2075, 2904
HpySE526I	ACGT	7 cut(s)	165, 856, 1445, 1748, 1948, 2157, 2469
Hsp92I	GRCGYC	1 cut(s)	2663
HspAI	GCGC	5 cut(s)	23, 158, 542, 724, 2511
KroI	GCCGGC	1 cut(s)	154
KroNI	GCCGGC	1 cut(s)	156
Ksp22I	TGATCA	1 cut(s)	2830
Kzo9I	GATC	8 cut(s)	613, 976, 1257, 1663, 1885, 2137, 2830, 3025
LguI	GCTCTTC	1 cut(s)	867
LmnI	GCTCC	5 cut(s)	207, 338, 721, 1238, 1557
Lsp1109I	GCAGC	7 cut(s)	147, 461, 940, 956, 2259, 2901, 3004
MaeI	CTAG	6 cut(s)	309, 330, 1607, 1722, 1865, 2240
MaeII	ACGT	7 cut(s)	165, 856, 1445, 1748, 1948, 2157, 2469
MaeIII	GTNAC	8 cut(s)	166, 807, 1032, 1543, 1900, 2198, 2686, 2809
MalI	GATC	8 cut(s)	615, 978, 1259, 1665, 1887, 2139, 2832, 3027
MboI	GATC	8 cut(s)	613, 976, 1257, 1663, 1885, 2137, 2830, 3025
MboII	GAAGA	8 cut(s)	401, 854, 1030, 1283, 1411, 1805, 1830, 2579
MfeI	CAATTG	1 cut(s)	966
MflI	RGATCY	1 cut(s)	1663
MhlI	GDGCHC	6 cut(s)	204, 662, 862, 1110, 1243, 1562
MlyI	GAGTC	2 cut(s)	189, 2945
MmeI	TCCRAC	6 cut(s)	270, 1200, 1690, 2313, 2922, 2976
Mph1103I	ATGCAT	2 cut(s)	1365, 1848
MreI	CGCCGGCG	1 cut(s)	154
MroNI	GCCGGC	1 cut(s)	154
MslI	CAYNNNNRTG	3 cut(s)	1148, 2156, 2763
MspA1I	CMGCKG	3 cut(s)	931, 1460, 2972
MspCI	CTTAAG	1 cut(s)	533
MspI	CCGG	2 cut(s)	155, 336
MspR9I	CCNGG	6 cut(s)	337, 849, 1584, 2310, 2807, 3014
MunI	CAATTG	1 cut(s)	966
Mva1269I	GAATGC	1 cut(s)	2232
MvaI	CCWGG	5 cut(s)	849, 1584, 2310, 2807, 3014
MvnI	CGCG	1 cut(s)	544
MwoI	GCNNNNNNNGC	5 cut(s)	160, 455, 653, 704, 2244
NaeI	GCCGGC	1 cut(s)	156
NciI	CCSGG	1 cut(s)	337
NdeII	GATC	8 cut(s)	613, 976, 1257, 1663, 1885, 2137, 2830, 3025
NgoMIV	GCCGGC	1 cut(s)	154
NheI	GCTAGC	1 cut(s)	1606
NlaIV	GGNNCC	7 cut(s)	234, 676, 1486, 1559, 1776, 2353, 2770
NmuCI	GTSAC	5 cut(s)	166, 1032, 2198, 2686, 2809
NsiI	ATGCAT	2 cut(s)	1365, 1848
NspI	RCATGY	5 cut(s)	1193, 1850, 2168, 2729, 2762
OliI	CACNNNNGTG	1 cut(s)	1148
PagI	TCATGA	1 cut(s)	2833
PaqCI	CACCTGC	1 cut(s)	2774
PciI	ACATGT	2 cut(s)	2164, 2758
PciSI	GCTCTTC	1 cut(s)	867
PcsI	WCGNNNNNNNCGW	1 cut(s)	1745
PctI	GAATGC	1 cut(s)	2232
PdiI	GCCGGC	1 cut(s)	156
PfeI	GAWTC	7 cut(s)	394, 599, 914, 1832, 2264, 2393, 2777
PfoI	TCCNGGA	1 cut(s)	335
PkrI	GCNGC	8 cut(s)	162, 451, 930, 946, 2274, 2916, 2985, 3019
PleI	GAGTC	2 cut(s)	188, 2945
PmaCI	CACGTG	1 cut(s)	166
PmlI	CACGTG	1 cut(s)	166
PpsI	GAGTC	2 cut(s)	188, 2945
Ppu21I	YACGTR	2 cut(s)	166, 857
PpuMI	RGGWCCY	1 cut(s)	1485
PscI	ACATGT	2 cut(s)	2164, 2758
PshBI	ATTAAT	1 cut(s)	1344
PsiI	TTATAA	1 cut(s)	1895
Psp124BI	GAGCTC	1 cut(s)	1243
Psp5II	RGGWCCY	1 cut(s)	1485
Psp6I	CCWGG	5 cut(s)	847, 1582, 2308, 2805, 3012
PspCI	CACGTG	1 cut(s)	166
PspGI	CCWGG	5 cut(s)	847, 1582, 2308, 2805, 3012
PspN4I	GGNNCC	7 cut(s)	234, 676, 1486, 1559, 1776, 2353, 2770
PspPI	GGNCC	4 cut(s)	1485, 2306, 2351, 2769
PspPPI	RGGWCCY	1 cut(s)	1485
PsrI	GAACNNNNNNTAC	2 cut(s)	837, 869
PstI	CTGCAG	1 cut(s)	2785
PstNI	CAGNNNCTG	1 cut(s)	1931
PsuI	RGATCY	1 cut(s)	1663
PvuII	CAGCTG	2 cut(s)	1460, 2972
RsaI	GTAC	4 cut(s)	44, 1450, 1676, 1738
RsaNI	GTAC	4 cut(s)	43, 1449, 1675, 1737
RseI	CAYNNNNRTG	3 cut(s)	1148, 2156, 2763
SacI	GAGCTC	1 cut(s)	1243
SapI	GCTCTTC	1 cut(s)	867
SatI	GCNGC	8 cut(s)	161, 450, 929, 945, 2273, 2915, 2984, 3018
Sau3AI	GATC	8 cut(s)	613, 976, 1257, 1663, 1885, 2137, 2830, 3025
Sau96I	GGNCC	4 cut(s)	1485, 2306, 2351, 2769
ScaI	AGTACT	1 cut(s)	44
SchI	GAGTC	2 cut(s)	189, 2945
ScrFI	CCNGG	6 cut(s)	337, 849, 1584, 2310, 2807, 3014
SduI	GDGCHC	6 cut(s)	204, 662, 862, 1110, 1243, 1562
SfcI	CTRYAG	2 cut(s)	387, 2781
SgrAI	CRCCGGYG	1 cut(s)	154
SinI	GGWCC	3 cut(s)	1485, 2306, 2769
SmiMI	CAYNNNNRTG	3 cut(s)	1148, 2156, 2763
SmlI	CTYRAG	5 cut(s)	38, 533, 590, 797, 2291
SmoI	CTYRAG	5 cut(s)	38, 533, 590, 797, 2291
SsiI	CCGC	6 cut(s)	152, 544, 868, 931, 2247, 2983
SspMI	CTAG	6 cut(s)	309, 330, 1607, 1722, 1865, 2240
SstI	GAGCTC	1 cut(s)	1243
StyD4I	CCNGG	6 cut(s)	335, 847, 1582, 2308, 2805, 3012
StyI	CCWWGG	4 cut(s)	439, 2239, 2772, 3040
TaiI	ACGT	7 cut(s)	168, 859, 1448, 1751, 1951, 2160, 2472
TaqI	TCGA	5 cut(s)	19, 612, 1440, 2140, 2962
TatI	WGTACW	2 cut(s)	42, 1448
TauI	GCSGC	1 cut(s)	2986
TfiI	GAWTC	7 cut(s)	394, 599, 914, 1832, 2264, 2393, 2777
TscAI	CASTG	5 cut(s)	768, 1253, 1987, 2532, 2830
TseFI	GTSAC	5 cut(s)	166, 1032, 2198, 2686, 2809
TseI	GCWGC	7 cut(s)	160, 449, 928, 944, 2272, 2914, 3017
Tsp45I	GTSAC	5 cut(s)	166, 1032, 2198, 2686, 2809
TspDTI	ATGAA	9 cut(s)	525, 559, 1274, 2103, 2196, 2267, 2374, 2651, 2850
TspGWI	ACGGA	4 cut(s)	103, 656, 1063, 1754
TspRI	CASTG	5 cut(s)	768, 1253, 1987, 2532, 2830
Vha464I	CTTAAG	1 cut(s)	533
VpaK11BI	GGWCC	3 cut(s)	1485, 2306, 2769
VspI	ATTAAT	1 cut(s)	1344
XapI	RAATTY	7 cut(s)	280, 738, 1007, 2338, 2364, 2867, 2976
XceI	RCATGY	5 cut(s)	1193, 1850, 2168, 2729, 2762
XcmI	CCANNNNNNNNNTGG	3 cut(s)	112, 1231, 2117
XmaJI	CCTAGG	1 cut(s)	2239
XmiI	GTMKAC	1 cut(s)	32
XspI	CTAG	6 cut(s)	309, 330, 1607, 1722, 1865, 2240
ZrmI	AGTACT	1 cut(s)	44
Zsp2I	ATGCAT	2 cut(s)	1365, 1848

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.