Rmu_sc0005054.1_g000011

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005054.1
OG0005085
Physical Location & Seq
Forward (+)
35397 .. 49433
14037 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2802 bp
atggaaggtgcaatcttggtctctgcgccgtcctctcctctatcttcaacttctcttccctctgtgactctaacccaagatgagctgaagaaaatcgcggcctacaaggccgtcgagtacgtcgagtccggcatggttctcggcctcggcaccggctccacggccaagcacgccgtcgaccgaatcggcgatctcctccgccaggggaagctccacaacattgtcggaatacccacctccagaaagacccacgagcaagctgtctccgtcggaatcccactcgccgacctcgactcccatcccgtcatcgatctcgccatcgacggcgccgacgaggtggacccccacctgaacctggtcaagggccgaggtgggtcgctgctgagagagaagatggtggagggtgcctgccggaaatttgtggtcattgtcgatgagtccaagcttgtgaagcatttgggtggtagtgggctggctatgccggtggaggttgtgccgttttgctggaaattcactgccaggaggctccagaacttgtttgaggattcgggttgtgttgcgaagctgaggacttcctcgggggcaaatggtgagccttatgtgacagacaatgggaactacattgtggacctgtatttcaaggaggacattggggatttgaaggccgcgagtgatgtgattttgcagcttgctggagttgtggagcatgggatgttcctggacatggccaccactgtgattgttgcaggagagatgggcataacgcttgaactcaagtcagacaaatttagccaaggggatcaaactctgggggctgtggagaaatggaatctgggagactatacaatcctcagggcctgcgagccttgcacctcaaggcgcagggcatctggaggatcttattcctcccttcttgttttctcatattttcttaatcaatctatcccaaacttttccagatctgactttatcctccatgaactcttccgccaacaccttatatcatcactcctccctttacctgagttcttccatgaaagttttcatggccactgctctaaagtgaaaatcacttacctaggtgagtatgggtgctcacgcacggatggtgcatcactgttggagaaagacgaaggtgcttccagatgtggtttcaaactttccaacccatgtctcagatctgttctttggggttttttgattactgagttacgcggcggctttgggcagcttcgagatgagaatctggggtcttggcaaaatgagctatctgagactgcagaggccccagggccttcgagcgatggtcctgagcttgtattggcggcgaaaaggaccaagaggcctgatattcttgatgggttcaagcgttatcgaggaggctgggacatagcgaatcgccattactgggcctctgttggattcacaggtgccgctggtttcattatttctgtcctatggtttgttgcttttggcatcgttcttgtggttcatcattgctgtggatggagaattaacattaaagatgaaggatcaccccgctcacagaggatgtgtctgattattctgatagtcttcacatgtgctgccacggttggatgcattcttctttctgttgggcaagctgagtttcatgaagaagtcctgcatactctaaatttcgttgtaaaccagtcagactacactgtacagaccttgagaaatgtgacagagtatctgtcccttgcaaaggatattaatgtggcccaggttttcctacctactgatgtcatggatagtattgacaagttgaatgtggatctcaacactgcagcagatacattaacagagaagacgagtgaaaattctgataaagtgaaaaaagtcttcagtattgtgcgttccgttttaattgccgtagcagcagtaatgcttttcctagctgtgatcggtcttcttctgtccgtccttcggcaccaacatgcaattcacatattcattgttagtggatggctacttgttgcaattacattcattctttgtggtgcctttgtgatcctcaacaatgctgtttctgacacctgtatggcaatggaagaatgggtagaaaatccccatgctgaaacagcacttagcaacgtccttccatgtgttgaccagaaaaccacaaaccagacactgagccagagtaaaggaattatcaatgacatggtcactgttgtcaacacgttcatctacacctatgccaatacgtatccgtcgcattctgatccgtattattacaatcagtctggacctctgatgccagctctttgttacccctatgattctgagttaagagatactcagtgtggggatcaacaggtttctattacaaatgcttctttggtttggcagaactatacatgtgaagtctcagcatctgggatgtgcatcactcccggaagggtgaagccagagatctacactcagctagttgcagcagttaatgagagctatgcactacagcactatacccctcctttactcagcctccaagattgtaattttgtccgagacacatttcgaacaatcacctcgagttattgccccccattggaccactacctgaaaattgtgaatgcaggtttggccctaatatcagttggagtcttgctctgtcttcttctctgggtactctatgcaaaccgcccccaaagggaggaagcgtttgcgaaacagtccttacccgtaaaagacaggagtatgaagagcagttcaaacaatcatagtcataatagcagcagcgatgtaacaacatcgaacatatcaaacggagtctaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

933

Amino Acids

102.32

Weight (kDa)

5.77

Isoelectric Point (pI)

38.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rib_5-P_isom_A PF06026 75 - 252 6.9e-62 Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 2594
AccB1I GGYRCC 6 cut(s) 149, 326, 404, 1430, 1953, 2024
AccBSI CCGCTC 1 cut(s) 1542
AccI GTMKAC 1 cut(s) 177
AccII CGCG 3 cut(s) 98, 668, 1215
AclWI GGATC 7 cut(s) 807, 904, 1540, 1806, 2029, 2243, 2343
AcoI YGGCCR 3 cut(s) 162, 726, 1048
AcsI RAATTY 5 cut(s) 416, 509, 785, 1657, 1843
AcuI CTGAAG 2 cut(s) 107, 1852
AcyI GRCGYC 1 cut(s) 327
AfaI GTAC 3 cut(s) 119, 1689, 2655
AflIII ACRYGT 3 cut(s) 1580, 2205, 2384
AgsI TTSAA 8 cut(s) 48, 640, 661, 770, 1156, 1366, 1792, 2739
AjnI CCWGG 6 cut(s) 201, 354, 518, 717, 1288, 1746
AjuI GAANNNNNNNTTGG 4 cut(s) 1950, 1982, 2591, 2623
AleI CACNNNNGTG 1 cut(s) 734
Alw21I GWGCWC 1 cut(s) 1097
Alw26I GTCTC 7 cut(s) 25, 268, 831, 1178, 1268, 2398, 2529
AlwI GGATC 7 cut(s) 807, 904, 1540, 1806, 2029, 2243, 2343
AlwNI CAGNNNCTG 3 cut(s) 858, 2158, 2402
Ama87I CYCGRG 2 cut(s) 577, 2557
ApeKI GCWGC 9 cut(s) 379, 685, 1228, 1586, 1811, 1901, 2459, 2760, 2763
ApoI RAATTY 5 cut(s) 416, 509, 785, 1657, 1843
AseI ATTAAT 1 cut(s) 1737
Asp700I GAANNNNTTC 1 cut(s) 1041
AspA2I CCTAGG 1 cut(s) 1078
AspLEI GCGC 3 cut(s) 28, 329, 882
AsuC2I CCSGG 1 cut(s) 2421
AsuHPI GGTGA 5 cut(s) 602, 1094, 1527, 2440, 2545
AsuII TTCGAA 1 cut(s) 2545
AvaI CYCGRG 2 cut(s) 577, 2557
AvaII GGWCC 6 cut(s) 340, 628, 1307, 1335, 2273, 2578
AvrII CCTAGG 1 cut(s) 1078
AxyI CCTNAGG 1 cut(s) 851
BalI TGGCCA 2 cut(s) 728, 1050
BanI GGYRCC 6 cut(s) 149, 326, 404, 1430, 1953, 2024
BauI CACGAG 1 cut(s) 251
BbsI GAAGAC 5 cut(s) 1567, 1838, 1858, 1925, 2633
Bbv12I GWGCWC 1 cut(s) 1097
BbvCI CCTCAGC 1 cut(s) 566
BbvI GCAGC 9 cut(s) 366, 697, 1240, 1573, 1823, 1913, 2471, 2772, 2775
BccI CCATC 9 cut(s) 306, 326, 388, 748, 1100, 1298, 1352, 1500, 1983
BceAI ACGGC 7 cut(s) 13, 95, 158, 177, 340, 481, 1880
BcgI CGANNNNNNTGC 2 cut(s) 121, 155
BciT130I CCWGG 6 cut(s) 203, 356, 520, 719, 1290, 1748
BciVI GTATCC 1 cut(s) 2244
BcnI CCSGG 1 cut(s) 2421
BcoDI GTCTC 7 cut(s) 25, 268, 831, 1178, 1268, 2398, 2529
BfaI CTAG 3 cut(s) 1079, 1919, 2453
BfmI CTRYAG 3 cut(s) 1278, 1809, 2483
BfoI RGCGCY 1 cut(s) 330
BfuAI ACCTGC 1 cut(s) 2594
BfuI GTATCC 1 cut(s) 2244
BglI GCCNNNNNGGC 1 cut(s) 107
BglII AGATCT 3 cut(s) 959, 1178, 2439
BlnI CCTAGG 1 cut(s) 1078
Bme1390I CCNGG 7 cut(s) 203, 356, 520, 719, 1290, 1748, 2421
Bme18I GGWCC 6 cut(s) 340, 628, 1307, 1335, 2273, 2578
BmeT110I CYCGRG 2 cut(s) 577, 2557
BmrFI CCNGG 7 cut(s) 203, 356, 520, 719, 1290, 1748, 2421
BmrI ACTGGG 1 cut(s) 1417
BmsI GCATC 7 cut(s) 896, 1121, 1485, 1589, 2271, 2408, 2421
BmuI ACTGGG 1 cut(s) 1417
BpiI GAAGAC 5 cut(s) 1567, 1838, 1858, 1925, 2633
BplI GAGNNNNNCTC 2 cut(s) 2619, 2651
BpmI CTGGAG 4 cut(s) 223, 512, 714, 912
Bpu10I CCTNAGC 2 cut(s) 566, 1311
Bpu14I TTCGAA 1 cut(s) 2545
BpuEI CTTGAG 3 cut(s) 758, 859, 1717
BpuMI CCSGG 1 cut(s) 2421
Bsa29I ATCGAT 1 cut(s) 309
BsaAI YACGTR 1 cut(s) 2232
BsaBI GATNNNNATC 2 cut(s) 1242, 2411
BsaHI GRCGYC 1 cut(s) 327
BsaI GGTCTC 1 cut(s) 25
BsaXI ACNNNNNCTCC 6 cut(s) 278, 308, 2496, 2526, 2672, 2702
Bse118I RCCGGY 2 cut(s) 152, 481
Bse1I ACTGG 2 cut(s) 1412, 1672
Bse21I CCTNAGG 1 cut(s) 851
Bse3DI GCAATG 2 cut(s) 1495, 2076
Bse8I GATNNNNATC 2 cut(s) 1242, 2411
BseBI CCWGG 6 cut(s) 203, 356, 520, 719, 1290, 1748
BseCI ATCGAT 1 cut(s) 309
BseGI GGATG 8 cut(s) 298, 717, 1111, 1511, 1557, 1604, 1994, 2412
BseJI GATNNNNATC 2 cut(s) 1242, 2411
BseMI GCAATG 2 cut(s) 1495, 2076
BseNI ACTGG 2 cut(s) 1412, 1672
BseRI GAGGAG 4 cut(s) 27, 185, 1001, 1392
BseXI GCAGC 9 cut(s) 366, 697, 1240, 1573, 1823, 1913, 2471, 2772, 2775
BseYI CCCAGC 1 cut(s) 1383
Bsh1236I CGCG 3 cut(s) 98, 668, 1215
Bsh1285I CGRYCG 1 cut(s) 181
BshNI GGYRCC 6 cut(s) 149, 326, 404, 1430, 1953, 2024
BshVI ATCGAT 1 cut(s) 309
BsiEI CGRYCG 1 cut(s) 181
BsiHKAI GWGCWC 1 cut(s) 1097
BsiHKCI CYCGRG 2 cut(s) 577, 2557
BsiSI CCGG 5 cut(s) 129, 153, 412, 482, 2421
BslFI GGGAC 2 cut(s) 1400, 1705
BsmAI GTCTC 7 cut(s) 25, 268, 831, 1178, 1268, 2398, 2529
BsmFI GGGAC 2 cut(s) 1400, 1705
BsmI GAATGC 3 cut(s) 1602, 2242, 2605
Bso31I GGTCTC 1 cut(s) 25
BsoBI CYCGRG 2 cut(s) 577, 2557
Bsp119I TTCGAA 1 cut(s) 2545
Bsp1286I GDGCHC 1 cut(s) 1097
Bsp1407I TGTACA 1 cut(s) 1687
BspDI ATCGAT 1 cut(s) 309
BspFNI CGCG 3 cut(s) 98, 668, 1215
BspHI TCATGA 1 cut(s) 1633
BspMAI CTGCAG 2 cut(s) 1282, 1813
BspMI ACCTGC 1 cut(s) 2594
BspPI GGATC 7 cut(s) 807, 904, 1540, 1806, 2029, 2243, 2343
BspQI GCTCTTC 1 cut(s) 2723
BspT104I TTCGAA 1 cut(s) 2545
BspT107I GGYRCC 6 cut(s) 149, 326, 404, 1430, 1953, 2024
BspTNI GGTCTC 1 cut(s) 25
BsrBI CCGCTC 1 cut(s) 1542
BsrDI GCAATG 2 cut(s) 1495, 2076
BsrFI RCCGGY 2 cut(s) 152, 481
BsrGI TGTACA 1 cut(s) 1687
BsrI ACTGG 2 cut(s) 1412, 1672
BssAI RCCGGY 2 cut(s) 152, 481
BssNI GRCGYC 1 cut(s) 327
BssSI CACGAG 1 cut(s) 251
BssT1I CCWWGG 2 cut(s) 793, 1078
Bst2BI CACGAG 1 cut(s) 251
Bst2UI CCWGG 6 cut(s) 203, 356, 520, 719, 1290, 1748
Bst4CI ACNGT 6 cut(s) 736, 1119, 1594, 1687, 2197, 2700
Bst6I CTCTTC 3 cut(s) 60, 989, 2723
BstACI GRCGYC 1 cut(s) 327
BstAUI TGTACA 1 cut(s) 1687
BstBAI YACGTR 1 cut(s) 2232
BstBI TTCGAA 1 cut(s) 2545
BstC8I GCNNGC 9 cut(s) 171, 258, 409, 474, 690, 859, 863, 1623, 2286
BstDSI CCRYGG 2 cut(s) 159, 1590
BstENI CCTNNNNNAGG 3 cut(s) 200, 359, 1727
BstF5I GGATG 8 cut(s) 298, 717, 1111, 1511, 1557, 1604, 1994, 2412
BstFNI CGCG 3 cut(s) 98, 668, 1215
BstH2I RGCGCY 1 cut(s) 330
BstHHI GCGC 3 cut(s) 28, 329, 882
BstMAI GTCTC 7 cut(s) 25, 268, 831, 1178, 1268, 2398, 2529
BstMCI CGRYCG 1 cut(s) 181
BstMWI GCNNNNNNNGC 9 cut(s) 107, 170, 451, 478, 867, 1264, 1901, 2105, 2609
BstNI CCWGG 6 cut(s) 203, 356, 520, 719, 1290, 1748
BstNSI RCATGY 3 cut(s) 1584, 1964, 2388
BstSCI CCNGG 7 cut(s) 201, 354, 518, 717, 1288, 1746, 2419
BstSFI CTRYAG 3 cut(s) 1278, 1809, 2483
BstSNI TACGTA 1 cut(s) 2232
BstUI CGCG 3 cut(s) 98, 668, 1215
BstV1I GCAGC 9 cut(s) 366, 697, 1240, 1573, 1823, 1913, 2471, 2772, 2775
BstV2I GAAGAC 5 cut(s) 1567, 1838, 1858, 1925, 2633
BstX2I RGATCY 5 cut(s) 896, 959, 1178, 1798, 2439
BstYI RGATCY 5 cut(s) 896, 959, 1178, 1798, 2439
Bsu15I ATCGAT 1 cut(s) 309
Bsu36I CCTNAGG 1 cut(s) 851
BsuI GTATCC 1 cut(s) 2244
BsuTUI ATCGAT 1 cut(s) 309
BtgI CCRYGG 2 cut(s) 159, 1590
BtgZI GCGATG 2 cut(s) 1317, 2781
BtsCI GGATG 8 cut(s) 298, 717, 1111, 1511, 1557, 1604, 1994, 2412
BtsI GCAGTG 3 cut(s) 513, 1051, 1806
BtsIMutI CAGTG 9 cut(s) 513, 732, 1051, 1115, 1683, 1806, 2156, 2193, 2333
BveI ACCTGC 1 cut(s) 2594
Cac8I GCNNGC 9 cut(s) 171, 258, 409, 474, 690, 859, 863, 1623, 2286
CaiI CAGNNNCTG 3 cut(s) 858, 2158, 2402
CciI TCATGA 1 cut(s) 1633
CfoI GCGC 3 cut(s) 28, 329, 882
Cfr10I RCCGGY 2 cut(s) 152, 481
ClaI ATCGAT 1 cut(s) 309
CsiI ACCWGGT 1 cut(s) 354
Csp6I GTAC 3 cut(s) 118, 1688, 2654
CspCI CAANNNNNGTGG 2 cut(s) 721, 756
CviQI GTAC 3 cut(s) 118, 1688, 2654
DinI GGCGCC 1 cut(s) 328
EaeI YGGCCR 3 cut(s) 162, 726, 1048
Eam1104I CTCTTC 3 cut(s) 60, 989, 2723
EarI CTCTTC 3 cut(s) 60, 989, 2723
EciI GGCGGA 2 cut(s) 188, 977
Eco105I TACGTA 1 cut(s) 2232
Eco130I CCWWGG 2 cut(s) 793, 1078
Eco147I AGGCCT 1 cut(s) 1345
Eco31I GGTCTC 1 cut(s) 25
Eco47I GGWCC 6 cut(s) 340, 628, 1307, 1335, 2273, 2578
Eco57I CTGAAG 2 cut(s) 107, 1852
Eco81I CCTNAGG 1 cut(s) 851
Eco88I CYCGRG 2 cut(s) 577, 2557
EcoNI CCTNNNNNAGG 3 cut(s) 200, 359, 1727
EcoO109I RGGNCCY 3 cut(s) 855, 1285, 1292
EcoRII CCWGG 6 cut(s) 201, 354, 518, 717, 1288, 1746
EcoT14I CCWWGG 2 cut(s) 793, 1078
EcoT22I ATGCAT 1 cut(s) 1604
EgeI GGCGCC 1 cut(s) 328
EheI GGCGCC 1 cut(s) 328
ErhI CCWWGG 2 cut(s) 793, 1078
FaqI GGGAC 2 cut(s) 1400, 1705
FauI CCCGC 1 cut(s) 1547
FblI GTMKAC 1 cut(s) 177
FokI GGATG 8 cut(s) 285, 724, 1118, 1518, 1564, 1611, 2001, 2419
FspBI CTAG 3 cut(s) 1079, 1919, 2453
GlaI GCGC 3 cut(s) 27, 328, 881
GsaI CCCAGC 1 cut(s) 1387
GsuI CTGGAG 4 cut(s) 223, 512, 714, 912
HaeII RGCGCY 1 cut(s) 330
HapII CCGG 5 cut(s) 129, 153, 412, 482, 2421
HhaI GCGC 3 cut(s) 28, 329, 882
Hin1I GRCGYC 1 cut(s) 327
Hin6I GCGC 3 cut(s) 26, 327, 880
HinP1I GCGC 3 cut(s) 26, 327, 880
HincII GTYRAC 3 cut(s) 178, 2134, 2203
HindII GTYRAC 3 cut(s) 178, 2134, 2203
HindIII AAGCTT 1 cut(s) 443
HpaII CCGG 5 cut(s) 129, 153, 412, 482, 2421
HphI GGTGA 5 cut(s) 602, 1094, 1527, 2440, 2545
Hpy166II GTNNAC 6 cut(s) 178, 340, 628, 1669, 2134, 2203
Hpy8I GTNNAC 6 cut(s) 178, 340, 628, 1669, 2134, 2203
Hpy99I CGWCG 7 cut(s) 116, 125, 179, 272, 326, 335, 2242
HpyAV CCTTC 8 cut(s) 655, 920, 1127, 1305, 1523, 1958, 2132, 2418
HpyCH4III ACNGT 6 cut(s) 736, 1119, 1594, 1687, 2197, 2700
HpyCH4IV ACGT 4 cut(s) 120, 2118, 2207, 2231
HpyF10VI GCNNNNNNNGC 9 cut(s) 107, 170, 451, 478, 867, 1264, 1901, 2105, 2609
HpySE526I ACGT 4 cut(s) 120, 2118, 2207, 2231
Hsp92I GRCGYC 1 cut(s) 327
HspAI GCGC 3 cut(s) 26, 327, 880
KasI GGCGCC 1 cut(s) 326
LguI GCTCTTC 1 cut(s) 2723
LmnI GCTCC 4 cut(s) 161, 216, 531, 703
Lsp1109I GCAGC 9 cut(s) 366, 697, 1240, 1573, 1823, 1913, 2471, 2772, 2775
LweI GCATC 7 cut(s) 896, 1121, 1485, 1589, 2271, 2408, 2421
MabI ACCWGGT 1 cut(s) 354
MaeI CTAG 3 cut(s) 1079, 1919, 2453
MaeII ACGT 4 cut(s) 120, 2118, 2207, 2231
MaeIII GTNAC 7 cut(s) 64, 601, 1209, 1705, 2191, 2294, 2770
MbiI CCGCTC 1 cut(s) 1542
MflI RGATCY 5 cut(s) 896, 959, 1178, 1798, 2439
MhlI GDGCHC 1 cut(s) 1097
MlsI TGGCCA 2 cut(s) 728, 1050
MluNI TGGCCA 2 cut(s) 728, 1050
Mly113I GGCGCC 1 cut(s) 327
MlyI GAGTC 5 cut(s) 61, 134, 287, 446, 2637
MmeI TCCRAC 7 cut(s) 205, 250, 1101, 1188, 1399, 1576, 2605
Mox20I TGGCCA 2 cut(s) 728, 1050
Mph1103I ATGCAT 1 cut(s) 1604
MroXI GAANNNNTTC 1 cut(s) 1041
MscI TGGCCA 2 cut(s) 728, 1050
MseI TTAA 8 cut(s) 933, 1515, 1521, 1737, 1823, 1889, 2315, 2466
MslI CAYNNNNRTG 5 cut(s) 459, 734, 1500, 1959, 2063
Msp20I TGGCCA 2 cut(s) 728, 1050
MspA1I CMGCKG 1 cut(s) 1436
MspI CCGG 5 cut(s) 129, 153, 412, 482, 2421
MspR9I CCNGG 7 cut(s) 203, 356, 520, 719, 1290, 1748, 2421
Mva1269I GAATGC 3 cut(s) 1602, 2242, 2605
MvaI CCWGG 6 cut(s) 203, 356, 520, 719, 1290, 1748
MvnI CGCG 3 cut(s) 98, 668, 1215
MwoI GCNNNNNNNGC 9 cut(s) 107, 170, 451, 478, 867, 1264, 1901, 2105, 2609
NarI GGCGCC 1 cut(s) 327
NciI CCSGG 1 cut(s) 2421
NmeAIII GCCGAG 3 cut(s) 120, 126, 392
NmuCI GTSAC 4 cut(s) 64, 601, 1705, 2191
NsiI ATGCAT 1 cut(s) 1604
NspI RCATGY 3 cut(s) 1584, 1964, 2388
NspV TTCGAA 1 cut(s) 2545
OliI CACNNNNGTG 1 cut(s) 734
PaeR7I CTCGAG 1 cut(s) 2557
PagI TCATGA 1 cut(s) 1633
PasI CCCWGGG 1 cut(s) 1289
PceI AGGCCT 1 cut(s) 1345
PciI ACATGT 2 cut(s) 1580, 2384
PciSI GCTCTTC 1 cut(s) 2723
PcsI WCGNNNNNNNCGW 4 cut(s) 120, 288, 327, 330
PctI GAATGC 3 cut(s) 1602, 2242, 2605
PdmI GAANNNNTTC 1 cut(s) 1041
PfeI GAWTC 8 cut(s) 183, 273, 545, 829, 1243, 1396, 1422, 2306
PflFI GACNNNGTC 1 cut(s) 2189
PfoI TCCNGGA 2 cut(s) 717, 2419
PleI GAGTC 5 cut(s) 61, 133, 287, 445, 2636
PluTI GGCGCC 1 cut(s) 330
PpsI GAGTC 5 cut(s) 61, 133, 287, 445, 2636
Ppu21I YACGTR 1 cut(s) 2232
PscI ACATGT 2 cut(s) 1580, 2384
PshBI ATTAAT 1 cut(s) 1737
Psp6I CCWGG 6 cut(s) 201, 354, 518, 717, 1288, 1746
PspFI CCCAGC 1 cut(s) 1383
PspGI CCWGG 6 cut(s) 201, 354, 518, 717, 1288, 1746
PspXI VCTCGAGB 1 cut(s) 2557
PsrI GAACNNNNNNTAC 2 cut(s) 1864, 1896
PstI CTGCAG 2 cut(s) 1282, 1813
PstNI CAGNNNCTG 3 cut(s) 858, 2158, 2402
PsuI RGATCY 5 cut(s) 896, 959, 1178, 1798, 2439
PsyI GACNNNGTC 1 cut(s) 2189
RsaI GTAC 3 cut(s) 119, 1689, 2655
RsaNI GTAC 3 cut(s) 118, 1688, 2654
RseI CAYNNNNRTG 5 cut(s) 459, 734, 1500, 1959, 2063
SalI GTCGAC 1 cut(s) 176
SapI GCTCTTC 1 cut(s) 2723
SaqAI TTAA 8 cut(s) 933, 1515, 1521, 1737, 1823, 1889, 2315, 2466
SchI GAGTC 5 cut(s) 61, 134, 287, 446, 2637
ScrFI CCNGG 7 cut(s) 203, 356, 520, 719, 1290, 1748, 2421
SduI GDGCHC 1 cut(s) 1097
SexAI ACCWGGT 1 cut(s) 354
SfaNI GCATC 7 cut(s) 896, 1121, 1485, 1589, 2271, 2408, 2421
SfcI CTRYAG 3 cut(s) 1278, 1809, 2483
SfiI GGCCNNNNNGGCC 1 cut(s) 107
SfoI GGCGCC 1 cut(s) 328
Sfr274I CTCGAG 1 cut(s) 2557
SfuI TTCGAA 1 cut(s) 2545
SinI GGWCC 6 cut(s) 340, 628, 1307, 1335, 2273, 2578
SlaI CTCGAG 1 cut(s) 2557
SmiMI CAYNNNNRTG 5 cut(s) 459, 734, 1500, 1959, 2063
SmlI CTYRAG 4 cut(s) 773, 874, 1696, 2557
SmoI CTYRAG 4 cut(s) 773, 874, 1696, 2557
SnaBI TACGTA 1 cut(s) 2232
SseBI AGGCCT 1 cut(s) 1345
SspDI GGCGCC 1 cut(s) 326
SspMI CTAG 3 cut(s) 1079, 1919, 2453
StuI AGGCCT 1 cut(s) 1345
StyD4I CCNGG 7 cut(s) 201, 354, 518, 717, 1288, 1746, 2419
StyI CCWWGG 2 cut(s) 793, 1078
TaaI ACNGT 6 cut(s) 736, 1119, 1594, 1687, 2197, 2700
TaiI ACGT 4 cut(s) 123, 2121, 2210, 2234
TaqII GACCGA 2 cut(s) 195, 1919
TatI WGTACW 1 cut(s) 1687
TauI GCSGC 6 cut(s) 101, 668, 1218, 1221, 1328, 1436
TfiI GAWTC 8 cut(s) 183, 273, 545, 829, 1243, 1396, 1422, 2306
Tru1I TTAA 8 cut(s) 933, 1515, 1521, 1737, 1823, 1889, 2315, 2466
Tru9I TTAA 8 cut(s) 933, 1515, 1521, 1737, 1823, 1889, 2315, 2466
TscAI CASTG 9 cut(s) 520, 739, 1058, 1122, 1690, 1813, 2163, 2200, 2333
TseFI GTSAC 4 cut(s) 64, 601, 1705, 2191
TseI GCWGC 9 cut(s) 379, 685, 1228, 1586, 1811, 1901, 2459, 2760, 2763
Tsp45I GTSAC 4 cut(s) 64, 601, 1705, 2191
TspGWI ACGGA 6 cut(s) 256, 1118, 1873, 1933, 2226, 2241
TspRI CASTG 9 cut(s) 520, 739, 1058, 1122, 1690, 1813, 2163, 2200, 2333
Tth111I GACNNNGTC 1 cut(s) 2189
VpaK11BI GGWCC 6 cut(s) 340, 628, 1307, 1335, 2273, 2578
VspI ATTAAT 1 cut(s) 1737
XagI CCTNNNNNAGG 3 cut(s) 200, 359, 1727
XapI RAATTY 5 cut(s) 416, 509, 785, 1657, 1843
XceI RCATGY 3 cut(s) 1584, 1964, 2388
XhoI CTCGAG 1 cut(s) 2557
XmaJI CCTAGG 1 cut(s) 1078
XmiI GTMKAC 1 cut(s) 177
XmnI GAANNNNTTC 1 cut(s) 1041
XspI CTAG 3 cut(s) 1079, 1919, 2453
Zsp2I ATGCAT 1 cut(s) 1604
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.