Rmu_sc0005238.1_g000005

Belongs to the complex I 75 kDa subunit family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005238.1
OG0011004
Physical Location & Seq
Forward (+)
36316 .. 48843
12528 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2202 bp
atggggttgggatcgcttgcttccagggccctaaggcccagggccgcaaggctcctcctcggctcccaaaaccccggacccttcttctccttccagagaaccatggtcacatccaccccggagctcaagaatccggagccgtccacggccgcccagcccgagccccccgccgccgccgaccttccgccccggaccccggtcggtggggcccgaatccacttcgcgaacccggacgacgcgatcgaggtgttcgtggacggataccctgtgaaaatccctaagggcatgtccgtgttgcaagcgtgtgaggtcgccggtgttgacatccctaggttttgctaccacagcagattgtccattgccggtaattgccgtatgtgtctcgtcgaggttgagaagtcacccaagcccgtcgcctcttgcgccatgcctgctatgcctgagttggaaggcacatccagggccctaaggcccagggccgcaaggctcctcctcggctcccaaaaccccggacccttcttctccttccagagaaccatggtcacatccaccccggagctcaagaatccggagccgtccacggccgcccagcccgagccccccgccgccgccgaccttccgccccggaccccggtcggtggggcccgaatccacttcgcgaacccggacgacgcgatcgaggtgttcgtggacggataccctgtgaaaatccctaagggcatgtccgtgttgcaagcgtgtgaggtcgccggtgttgacatccctaggttttgctaccacagcagattgtccattgccggtaattgccgtatgtgtctcgtcgaggttgagaagtcacccaagcccgtcgcctcttgcgccatgcctgctatgcctggtatgaaaattaagactgacactccaatagccaagaaggctcgcgaaggggacataaatgaggaatggatatcagacaagactcgattttgttatgacggtttgaagaggcaaaggttgaatgaccctatgattcgtggtgctgatggacgctttaagcccgtgagctggcgtgatgcccttgctgttgttgctgagatggctcataaagttaagccagaagaaattgttggggttgctggtcagctgtctgatgccgagtccatgatggcactaaaagactttttaaataaaatggggtctaacaatgtgtggtgcgaaggaaatggttccaatcgtgatgctgatcttcgatctggatatataatgaacagtagcattgctggacttgagaaggcagatgcttttctattggttggcacccagccaagagtagaagctgctattgtaaatgctagaatccggaagacagtgttatctaaccaagccaaggttgggtacgttggtcctgaagctgatttaaactatgaacaccagcatcttggaacaggccccgatacacttctagaacttgctgagcatcgccaccccttttcctcagtcctcttaaatgccaaaaaccctgccattattgttggtgctgggctgtttgagagaaaagacaaggatgcaattttctcagcccttgaaaccattgccaaatatgctgatgctgtaaggcctgattggaatggatttaatgtactgcttctcaaagccgcccaggctgcagcacttgaccttggacttgtgccagaatctgaaaacagcattgagtctgcaaaatttgtttacctgatgggtgctgatgatgttaacttagacaaggttccatctgatgcatttgtggtttatcaagggcatcatggtgaccggggtgtgtatcgggctaatgtcatcctccctgcagcagcgttcagtgaaaaggaaggaacatacgtaaatactgaagggtgctctcagcaaacattgcctgcagttccaactgtcggtgatgccagggacgactggaagatactccgtgctctatctgaggtagcaggcgtcaagctgccttatgatacagttgggaccctccgatcccggataaagaccgtggcaccaaacatcttaaacatagacgagagagagccagctactttttcattttcgattaagcctgagaccactcagaaaatggatttgattccatttggtactgctgttgataatttctatatgaccgattccatcaccagggcatcaaagataatggcacaatgcagtgcgttgctattgaagaagtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00190 ko01100 ko04714 ko04723 ko04932 ko05010 ko05012 ko05016 map00190 map01100 map04714 map04723 map04932 map05010 map05012 map05016
Pfam Domains
Protein Families
Fer2_4 Molybdopterin NADH-G_4Fe-4S_3 NADH_dhqG_C

Protein Analysis

733

Amino Acids

79.3

Weight (kDa)

6.85

Isoelectric Point (pI)

37.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Fer2_4 PF13510 79 - 147 7.5e-15 2Fe-2S iron-sulfur cluster binding domain
Fer2 PF00111 84 - 133 7.1e-07 2Fe-2S iron-sulfur cluster binding domain
Fer2_4 PF13510 224 - 300 6.2e-19 2Fe-2S iron-sulfur cluster binding domain
Fer2 PF00111 229 - 278 7.6e-07 2Fe-2S iron-sulfur cluster binding domain
Fer4_NDSU1 PF22151 309 - 325 7.7e-07 NADH-ubiquinone oxidoreductase NDSU1/NuoG-like, 4Fe-4S domain
Molybdopterin PF00384 331 - 651 2.5e-109 Molybdopterin oxidoreductase
NADH_dhqG_C PF09326 691 - 726 5.6e-11 NADH-ubiquinone oxidoreductase subunit G, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011004)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G37510 AT5G37510
fragaria_vesca FvH4_1g30070
malus_domestica MD09G1268900.v1.1 MD17G1267300.v1.1
prunus_persica Prupe.3G165400_v2.0.a1
pyrus_communis pycom09g18080 pycom17g26640
rosa_chinensis RchiOBHm_Chr3g0491991
rosa_laevigata RLG00000022799 RLG00000022807
rosa_multiflora Rmu_sc0005238.1_g000005 Rmu_sc0036946.1_g000001
rosa_roxburghii Rroxscaffold_6G00392660
rosa_rugosa Rorug03G0251000
rosa_samantha Rh3AG301000 Rh3BG337200 Rh3CG334300 Rh3DG336600
rosa_wichuraiana Rw3G026610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 1295, 2014
AccII CGCG 5 cut(s) 224, 239, 659, 674, 921
AccIII TCCGGA 3 cut(s) 133, 568, 1338
AclWI GGATC 2 cut(s) 19, 1989
AcoI YGGCCR 2 cut(s) 147, 582
AcsI RAATTY 1 cut(s) 1700
AcuI CTGAAG 2 cut(s) 1407, 1884
AcyI GRCGYC 1 cut(s) 1959
AfaI GTAC 3 cut(s) 1376, 1620, 2113
AfiI CCNNNNNNNGG 9 cut(s) 196, 203, 631, 638, 1044, 1366, 1371, 1904, 2151
AgsI TTSAA 4 cut(s) 982, 997, 1565, 2194
AjnI CCWGG 8 cut(s) 23, 38, 458, 473, 874, 1638, 1913, 2150
AjuI GAANNNNNNNTTGG 2 cut(s) 1089, 1121
AluBI AGCT 8 cut(s) 124, 559, 1044, 1123, 1316, 1391, 1966, 2051
AluI AGCT 8 cut(s) 124, 559, 1044, 1123, 1316, 1391, 1966, 2051
Alw21I GWGCWC 4 cut(s) 126, 561, 1874, 1942
Alw26I GTCTC 3 cut(s) 386, 821, 2072
AlwI GGATC 2 cut(s) 19, 1989
AlwNI CAGNNNCTG 1 cut(s) 1676
Ama87I CYCGRG 2 cut(s) 158, 593
Aor13HI TCCGGA 3 cut(s) 133, 568, 1338
ApaI GGGCCC 4 cut(s) 31, 211, 466, 646
ApeKI GCWGC 6 cut(s) 1316, 1643, 1646, 1823, 1826, 1966
ApoI RAATTY 1 cut(s) 1700
Asp700I GAANNNNTTC 1 cut(s) 1204
AspA2I CCTAGG 2 cut(s) 329, 764
AspLEI GCGC 2 cut(s) 425, 860
AsuHPI GGTGA 5 cut(s) 393, 828, 1796, 1919, 2140
AvaI CYCGRG 2 cut(s) 158, 593
AvaII GGWCC 6 cut(s) 77, 192, 512, 627, 1382, 1986
AvrII CCTAGG 2 cut(s) 329, 764
AxyI CCTNAGG 4 cut(s) 32, 279, 467, 714
BaeGI GKGCMC 4 cut(s) 31, 211, 466, 646
BaeI ACNNNNGTAYC 4 cut(s) 1366, 1399, 2103, 2136
BanI GGYRCC 2 cut(s) 1295, 2014
BanII GRGCYC 8 cut(s) 31, 126, 165, 211, 466, 561, 600, 646
BbsI GAAGAC 1 cut(s) 1349
Bbv12I GWGCWC 4 cut(s) 126, 561, 1874, 1942
BbvI GCAGC 6 cut(s) 1303, 1630, 1658, 1835, 1838, 1953
BccI CCATC 6 cut(s) 1016, 1069, 1138, 1708, 1756, 2153
BceAI ACGGC 6 cut(s) 124, 162, 357, 559, 597, 792
BciT130I CCWGG 8 cut(s) 25, 40, 460, 475, 876, 1640, 1915, 2152
BciVI GTATCC 2 cut(s) 254, 689
BcoDI GTCTC 3 cut(s) 386, 821, 2072
BfaI CTAG 4 cut(s) 330, 765, 1332, 1442
BfmI CTRYAG 3 cut(s) 1644, 1821, 1890
BfuI GTATCC 2 cut(s) 254, 689
BglI GCCNNNNNGGC 2 cut(s) 914, 1640
BlnI CCTAGG 2 cut(s) 329, 764
BlpI GCTNAGC 1 cut(s) 1452
Bme18I GGWCC 6 cut(s) 77, 192, 512, 627, 1382, 1986
BmeT110I CYCGRG 2 cut(s) 158, 593
BoxI GACNNNNGTC 2 cut(s) 197, 632
BpiI GAAGAC 1 cut(s) 1349
Bpu1102I GCTNAGC 1 cut(s) 1452
BpuEI CTTGAG 3 cut(s) 110, 545, 1286
BsaAI YACGTR 1 cut(s) 1855
BsaBI GATNNNNATC 1 cut(s) 1221
BsaHI GRCGYC 1 cut(s) 1959
BsaI GGTCTC 1 cut(s) 2072
BsaWI WCCGGW 3 cut(s) 133, 568, 1338
BsaXI ACNNNNNCTCC 2 cut(s) 883, 913
Bsc4I CCNNNNNNNGG 9 cut(s) 196, 203, 631, 638, 1044, 1366, 1371, 1904, 2151
Bse118I RCCGGY 4 cut(s) 314, 362, 749, 797
Bse1I ACTGG 1 cut(s) 1928
Bse21I CCTNAGG 4 cut(s) 32, 279, 467, 714
Bse3DI GCAATG 5 cut(s) 357, 792, 1254, 1569, 1883
Bse8I GATNNNNATC 1 cut(s) 1221
BseAI TCCGGA 3 cut(s) 133, 568, 1338
BseBI CCWGG 8 cut(s) 25, 40, 460, 475, 876, 1640, 1915, 2152
BseGI GGATG 7 cut(s) 110, 324, 455, 545, 759, 1549, 1812
BseJI GATNNNNATC 1 cut(s) 1221
BseLI CCNNNNNNNGG 9 cut(s) 196, 203, 631, 638, 1044, 1366, 1371, 1904, 2151
BseMI GCAATG 5 cut(s) 357, 792, 1254, 1569, 1883
BseMII CTCAG 9 cut(s) 432, 1062, 1443, 1488, 1569, 1889, 1938, 2067, 2099
BseNI ACTGG 1 cut(s) 1928
BseRI GAGGAG 4 cut(s) 44, 47, 479, 482
BseSI GKGCMC 4 cut(s) 31, 211, 466, 646
BseX3I CGGCCG 2 cut(s) 147, 582
BseXI GCAGC 6 cut(s) 1303, 1630, 1658, 1835, 1838, 1953
BseYI CCCAGC 4 cut(s) 153, 588, 1299, 1517
Bsh1236I CGCG 5 cut(s) 224, 239, 659, 674, 921
Bsh1285I CGRYCG 6 cut(s) 150, 201, 243, 585, 636, 678
BshNI GGYRCC 2 cut(s) 1295, 2014
BsiEI CGRYCG 6 cut(s) 150, 201, 243, 585, 636, 678
BsiHKAI GWGCWC 4 cut(s) 126, 561, 1874, 1942
BsiHKCI CYCGRG 2 cut(s) 158, 593
BslFI GGGAC 3 cut(s) 941, 1931, 1999
BslI CCNNNNNNNGG 9 cut(s) 196, 203, 631, 638, 1044, 1366, 1371, 1904, 2151
BsmAI GTCTC 3 cut(s) 386, 821, 2072
BsmFI GGGAC 3 cut(s) 941, 1931, 1999
Bso31I GGTCTC 1 cut(s) 2072
BsoBI CYCGRG 2 cut(s) 158, 593
Bsp120I GGGCCC 4 cut(s) 27, 207, 462, 642
Bsp13I TCCGGA 3 cut(s) 133, 568, 1338
Bsp143I GATC 6 cut(s) 11, 240, 675, 1222, 1229, 1994
Bsp1720I GCTNAGC 1 cut(s) 1452
Bsp19I CCATGG 2 cut(s) 102, 537
Bsp68I TCGCGA 3 cut(s) 224, 659, 921
BspCNI CTCAG 9 cut(s) 433, 1063, 1444, 1487, 1568, 1888, 1939, 2068, 2098
BspEI TCCGGA 3 cut(s) 133, 568, 1338
BspFNI CGCG 5 cut(s) 224, 239, 659, 674, 921
BspMAI CTGCAG 3 cut(s) 1648, 1825, 1894
BspPI GGATC 2 cut(s) 19, 1989
BspT107I GGYRCC 2 cut(s) 1295, 2014
BspTNI GGTCTC 1 cut(s) 2072
BsrDI GCAATG 5 cut(s) 357, 792, 1254, 1569, 1883
BsrFI RCCGGY 4 cut(s) 314, 362, 749, 797
BsrI ACTGG 1 cut(s) 1928
BssAI RCCGGY 4 cut(s) 314, 362, 749, 797
BssMI GATC 6 cut(s) 11, 240, 675, 1222, 1229, 1994
BssNI GRCGYC 1 cut(s) 1959
BssT1I CCWWGG 6 cut(s) 102, 329, 537, 764, 1365, 1657
Bst2UI CCWGG 8 cut(s) 25, 40, 460, 475, 876, 1640, 1915, 2152
Bst4CI ACNGT 6 cut(s) 977, 1250, 1348, 1903, 1981, 2011
Bst6I CTCTTC 1 cut(s) 977
BstACI GRCGYC 1 cut(s) 1959
BstAPI GCANNNNNTGC 1 cut(s) 1885
BstBAI YACGTR 1 cut(s) 1855
BstDSI CCRYGG 5 cut(s) 102, 144, 537, 579, 2010
BstEII GGTNACC 1 cut(s) 1784
BstF5I GGATG 7 cut(s) 110, 324, 455, 545, 759, 1549, 1812
BstFNI CGCG 5 cut(s) 224, 239, 659, 674, 921
BstHHI GCGC 2 cut(s) 425, 860
BstKTI GATC 6 cut(s) 14, 243, 678, 1225, 1232, 1997
BstMAI GTCTC 3 cut(s) 386, 821, 2072
BstMBI GATC 6 cut(s) 11, 240, 675, 1222, 1229, 1994
BstMCI CGRYCG 6 cut(s) 150, 201, 243, 585, 636, 678
BstNI CCWGG 8 cut(s) 25, 40, 460, 475, 876, 1640, 1915, 2152
BstNSI RCATGY 2 cut(s) 289, 724
BstPAI GACNNNNGTC 2 cut(s) 197, 632
BstPI GGTNACC 1 cut(s) 1784
BstSFI CTRYAG 3 cut(s) 1644, 1821, 1890
BstSLI GKGCMC 4 cut(s) 31, 211, 466, 646
BstSNI TACGTA 1 cut(s) 1855
BstUI CGCG 5 cut(s) 224, 239, 659, 674, 921
BstV1I GCAGC 6 cut(s) 1303, 1630, 1658, 1835, 1838, 1953
BstV2I GAAGAC 1 cut(s) 1349
BstXI CCANNNNNNTGG 1 cut(s) 1418
BstZI CGGCCG 2 cut(s) 147, 582
Bsu36I CCTNAGG 4 cut(s) 32, 279, 467, 714
BsuI GTATCC 2 cut(s) 254, 689
BtgI CCRYGG 5 cut(s) 102, 144, 537, 579, 2010
BtgZI GCGATG 1 cut(s) 1442
BtsCI GGATG 7 cut(s) 110, 324, 455, 545, 759, 1549, 1812
BtsI GCAGTG 1 cut(s) 2185
BtsIMutI CAGTG 3 cut(s) 1353, 1840, 2185
BtuMI TCGCGA 3 cut(s) 224, 659, 921
CaiI CAGNNNCTG 1 cut(s) 1676
CfoI GCGC 2 cut(s) 425, 860
Cfr10I RCCGGY 4 cut(s) 314, 362, 749, 797
CseI GACGC 4 cut(s) 245, 680, 1035, 1948
Csp6I GTAC 3 cut(s) 1375, 1619, 2112
CviAII CATG 8 cut(s) 103, 286, 427, 538, 721, 862, 1141, 1781
CviQI GTAC 3 cut(s) 1375, 1619, 2112
DpnI GATC 6 cut(s) 13, 242, 677, 1224, 1231, 1996
DpnII GATC 6 cut(s) 11, 240, 675, 1222, 1229, 1994
DraI TTTAAA 2 cut(s) 1164, 1398
EaeI YGGCCR 2 cut(s) 147, 582
EagI CGGCCG 2 cut(s) 147, 582
Eam1104I CTCTTC 1 cut(s) 977
EarI CTCTTC 1 cut(s) 977
EciI GGCGGA 2 cut(s) 174, 609
Ecl136II GAGCTC 2 cut(s) 124, 559
EclXI CGGCCG 2 cut(s) 147, 582
Eco105I TACGTA 1 cut(s) 1855
Eco130I CCWWGG 6 cut(s) 102, 329, 537, 764, 1365, 1657
Eco147I AGGCCT 1 cut(s) 1597
Eco24I GRGCYC 8 cut(s) 31, 126, 165, 211, 466, 561, 600, 646
Eco31I GGTCTC 1 cut(s) 2072
Eco32I GATATC 1 cut(s) 948
Eco47I GGWCC 6 cut(s) 77, 192, 512, 627, 1382, 1986
Eco52I CGGCCG 2 cut(s) 147, 582
Eco53kI GAGCTC 2 cut(s) 124, 559
Eco57I CTGAAG 2 cut(s) 1407, 1884
Eco81I CCTNAGG 4 cut(s) 32, 279, 467, 714
Eco88I CYCGRG 2 cut(s) 158, 593
Eco91I GGTNACC 1 cut(s) 1784
EcoICRI GAGCTC 2 cut(s) 124, 559
EcoO109I RGGNCCY 8 cut(s) 27, 28, 207, 462, 463, 642, 1427, 1986
EcoO65I GGTNACC 1 cut(s) 1784
EcoRII CCWGG 8 cut(s) 23, 38, 458, 473, 874, 1638, 1913, 2150
EcoRV GATATC 1 cut(s) 948
EcoT14I CCWWGG 6 cut(s) 102, 329, 537, 764, 1365, 1657
EcoT22I ATGCAT 1 cut(s) 1759
EcoT38I GRGCYC 8 cut(s) 31, 126, 165, 211, 466, 561, 600, 646
ErhI CCWWGG 6 cut(s) 102, 329, 537, 764, 1365, 1657
FaeI CATG 8 cut(s) 106, 289, 430, 541, 724, 865, 1144, 1784
FaqI GGGAC 3 cut(s) 941, 1931, 1999
FatI CATG 8 cut(s) 102, 285, 426, 537, 720, 861, 1140, 1780
FauI CCCGC 2 cut(s) 175, 610
FokI GGATG 7 cut(s) 97, 311, 442, 532, 746, 1556, 1799
FriOI GRGCYC 8 cut(s) 31, 126, 165, 211, 466, 561, 600, 646
FspBI CTAG 4 cut(s) 330, 765, 1332, 1442
GlaI GCGC 2 cut(s) 424, 859
GsaI CCCAGC 4 cut(s) 157, 592, 1303, 1521
HgaI GACGC 4 cut(s) 245, 680, 1035, 1948
HhaI GCGC 2 cut(s) 425, 860
Hin1I GRCGYC 1 cut(s) 1959
Hin1II CATG 8 cut(s) 106, 289, 430, 541, 724, 865, 1144, 1784
Hin6I GCGC 2 cut(s) 423, 858
HinP1I GCGC 2 cut(s) 423, 858
HincII GTYRAC 3 cut(s) 322, 757, 1732
HindII GTYRAC 3 cut(s) 322, 757, 1732
HpaI GTTAAC 1 cut(s) 1732
HphI GGTGA 5 cut(s) 393, 828, 1796, 1919, 2140
Hpy166II GTNNAC 8 cut(s) 144, 256, 322, 579, 691, 757, 1708, 1732
Hpy188I TCNGA 7 cut(s) 952, 1129, 1678, 1753, 1948, 1994, 2088
Hpy8I GTNNAC 8 cut(s) 144, 256, 322, 579, 691, 757, 1708, 1732
Hpy99I CGWCG 6 cut(s) 239, 389, 416, 674, 824, 851
HpyCH4III ACNGT 6 cut(s) 977, 1250, 1348, 1903, 1981, 2011
HpyCH4IV ACGT 2 cut(s) 1377, 1854
HpyCH4V TGCA 9 cut(s) 298, 733, 1547, 1646, 1697, 1757, 1823, 1892, 2178
HpySE526I ACGT 2 cut(s) 1377, 1854
Hsp92I GRCGYC 1 cut(s) 1959
Hsp92II CATG 8 cut(s) 106, 289, 430, 541, 724, 865, 1144, 1784
HspAI GCGC 2 cut(s) 423, 858
KflI GGGWCCC 1 cut(s) 1986
Kpn2I TCCGGA 3 cut(s) 133, 568, 1338
KspAI GTTAAC 1 cut(s) 1732
Kzo9I GATC 6 cut(s) 11, 240, 675, 1222, 1229, 1994
LmnI GCTCC 8 cut(s) 57, 68, 121, 136, 492, 503, 556, 571
Lsp1109I GCAGC 6 cut(s) 1303, 1630, 1658, 1835, 1838, 1953
MaeI CTAG 4 cut(s) 330, 765, 1332, 1442
MaeII ACGT 2 cut(s) 1377, 1854
MaeIII GTNAC 5 cut(s) 106, 399, 541, 834, 1784
MalI GATC 6 cut(s) 13, 242, 677, 1224, 1231, 1996
MboI GATC 6 cut(s) 11, 240, 675, 1222, 1229, 1994
MboII GAAGA 7 cut(s) 76, 511, 994, 1109, 1217, 1354, 1939
MluCI AATT 7 cut(s) 367, 802, 885, 1101, 1548, 1700, 2125
MlyI GAGTC 3 cut(s) 952, 1145, 1700
MmeI TCCRAC 2 cut(s) 426, 1922
Mph1103I ATGCAT 1 cut(s) 1759
MroI TCCGGA 3 cut(s) 133, 568, 1338
MroXI GAANNNNTTC 1 cut(s) 1204
MslI CAYNNNNRTG 3 cut(s) 290, 725, 1782
MspA1I CMGCKG 1 cut(s) 1123
MvaI CCWGG 8 cut(s) 25, 40, 460, 475, 876, 1640, 1915, 2152
MvnI CGCG 5 cut(s) 224, 239, 659, 674, 921
NcoI CCATGG 2 cut(s) 102, 537
NdeII GATC 6 cut(s) 11, 240, 675, 1222, 1229, 1994
NlaIII CATG 8 cut(s) 106, 289, 430, 541, 724, 865, 1144, 1784
NmeAIII GCCGAG 3 cut(s) 39, 474, 1159
NmuCI GTSAC 5 cut(s) 106, 399, 541, 834, 1784
NruI TCGCGA 3 cut(s) 224, 659, 921
NsiI ATGCAT 1 cut(s) 1759
NspI RCATGY 2 cut(s) 289, 724
PasI CCCWGGG 2 cut(s) 39, 474
PceI AGGCCT 1 cut(s) 1597
PcsI WCGNNNNNNNCGW 4 cut(s) 240, 249, 675, 684
PdmI GAANNNNTTC 1 cut(s) 1204
PfeI GAWTC 9 cut(s) 130, 213, 565, 648, 1009, 1335, 1673, 2101, 2141
PfoI TCCNGGA 1 cut(s) 1997
Ple19I CGATCG 2 cut(s) 243, 678
PleI GAGTC 3 cut(s) 952, 1144, 1699
PpsI GAGTC 3 cut(s) 952, 1144, 1699
Ppu21I YACGTR 1 cut(s) 1855
PpuMI RGGWCCY 1 cut(s) 1986
PshAI GACNNNNGTC 2 cut(s) 197, 632
Psp124BI GAGCTC 2 cut(s) 126, 561
Psp5II RGGWCCY 1 cut(s) 1986
Psp6I CCWGG 8 cut(s) 23, 38, 458, 473, 874, 1638, 1913, 2150
PspEI GGTNACC 1 cut(s) 1784
PspFI CCCAGC 4 cut(s) 153, 588, 1299, 1517
PspGI CCWGG 8 cut(s) 23, 38, 458, 473, 874, 1638, 1913, 2150
PspOMI GGGCCC 4 cut(s) 27, 207, 462, 642
PspPPI RGGWCCY 1 cut(s) 1986
PstI CTGCAG 3 cut(s) 1648, 1825, 1894
PstNI CAGNNNCTG 1 cut(s) 1676
PvuI CGATCG 2 cut(s) 243, 678
PvuII CAGCTG 1 cut(s) 1123
RruI TCGCGA 3 cut(s) 224, 659, 921
RsaI GTAC 3 cut(s) 1376, 1620, 2113
RsaNI GTAC 3 cut(s) 1375, 1619, 2112
RseI CAYNNNNRTG 3 cut(s) 290, 725, 1782
SacI GAGCTC 2 cut(s) 126, 561
Sau3AI GATC 6 cut(s) 11, 240, 675, 1222, 1229, 1994
SchI GAGTC 3 cut(s) 952, 1145, 1700
SfcI CTRYAG 3 cut(s) 1644, 1821, 1890
SgrAI CRCCGGYG 2 cut(s) 314, 749
SinI GGWCC 6 cut(s) 77, 192, 512, 627, 1382, 1986
SmiMI CAYNNNNRTG 3 cut(s) 290, 725, 1782
SmlI CTYRAG 3 cut(s) 125, 560, 1265
SmoI CTYRAG 3 cut(s) 125, 560, 1265
SnaBI TACGTA 1 cut(s) 1855
Sse9I AATT 7 cut(s) 367, 802, 885, 1101, 1548, 1700, 2125
SseBI AGGCCT 1 cut(s) 1597
SspMI CTAG 4 cut(s) 330, 765, 1332, 1442
SstI GAGCTC 2 cut(s) 126, 561
StuI AGGCCT 1 cut(s) 1597
StyI CCWWGG 6 cut(s) 102, 329, 537, 764, 1365, 1657
TaaI ACNGT 6 cut(s) 977, 1250, 1348, 1903, 1981, 2011
TaiI ACGT 2 cut(s) 1380, 1857
TaqI TCGA 7 cut(s) 243, 387, 678, 822, 961, 1228, 2066
TaqII GACCGA 1 cut(s) 2153
TasI AATT 7 cut(s) 367, 802, 885, 1101, 1548, 1700, 2125
TatI WGTACW 1 cut(s) 1618
TauI GCSGC 9 cut(s) 47, 152, 173, 176, 482, 587, 608, 611, 1637
TfiI GAWTC 9 cut(s) 130, 213, 565, 648, 1009, 1335, 1673, 2101, 2141
TscAI CASTG 3 cut(s) 1353, 1840, 2185
TseFI GTSAC 5 cut(s) 106, 399, 541, 834, 1784
TseI GCWGC 6 cut(s) 1316, 1643, 1646, 1823, 1826, 1966
Tsp45I GTSAC 5 cut(s) 106, 399, 541, 834, 1784
TspDTI ATGAA 4 cut(s) 896, 1259, 1419, 2049
TspGWI ACGGA 5 cut(s) 273, 280, 708, 715, 1925
TspRI CASTG 3 cut(s) 1353, 1840, 2185
VpaK11BI GGWCC 6 cut(s) 77, 192, 512, 627, 1382, 1986
XapI RAATTY 1 cut(s) 1700
XbaI TCTAGA 1 cut(s) 1441
XceI RCATGY 2 cut(s) 289, 724
XcmI CCANNNNNNNNNTGG 2 cut(s) 1367, 2089
XmaJI CCTAGG 2 cut(s) 329, 764
XmnI GAANNNNTTC 1 cut(s) 1204
XspI CTAG 4 cut(s) 330, 765, 1332, 1442
Zsp2I ATGCAT 1 cut(s) 1759
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.