Rmu_sc0005316.1_g000013

Peptidylprolyl isomerase domain and WD repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005316.1
OG0009586
Physical Location & Seq
Reverse (-)
34592 .. 41938
7347 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1695 bp
atgcaccgagacgtggtaactcatgtcgctgtgtcggcggccgaatttgtcatcactggaagtgttgatggacatttgaagttttggaagaaaaagcctatcggcattgaattcgcgaagcattttaggtcccaccttggtcccattgaagacctagctgttagtgctgatggtttgctttgctgtacaatttcaaatgatccctctgtgaagatatatgatgttgtcaactatgatatgatggccatgattcatacatcctttgttcctggtgctgttgagtgggtctacaaacaaggggatgtcaaagccaggcttgccatcagtgatagaaactcgtcatctgtacacatttttgatgcacgggctggtaccaatgaacctttaatctccaaaaagatacacctggggccagtgaaactcatgagatacaatcatgaatatgacacggtcatatcagctgacgagaagggaatgattgagtattggaatcctgctacacttgagttcccagatagtgggatgaaatttagattcaaaagtgacacgaatctcttcgatattgtgaaatgcaaaactacagtttcttctattgaggttagcccagatggcaaacaattttcggtcacgtcacctgaccgtaggatacgtgtattctggtttctaacgggtaaaatacgacgagtttatgatgaatctcttgaggtggcccaagaccttcaaagaagtgacgtacctttgtaccagctggaagctattgacttcggtcgaagaatggctgttgagaaagaaatagagaaaacagaaactgccccacagccgaatgcagtttttgatgaaagctcaaattttcttatttatccaactctgcttgggataaaagtggtaaacctacacactaataaagttgcccggattctaggaaaagtggaaaacaatgataggtttttgagaattgccttataccaaggtgacagaagcagtaaaaaagttagaaaaattcctgcagctgcagcaaatgtcaatgagagcaaagagcctctgtcggatcccactctcatatgttgtgccttcaagaaacacagaatctatctattcagtcagagagagccagaagaacctgaagatgcaaccaagggaagagatgtgttcaatgagaagcctcctgctgatgaactcttagctgcatctgatataggcaaatcagtcacgacatcccttcctgacaatgtgattatgcatactacaatgggagacatacacatgaagctgtatccagaggaatgccctaaaactgtggagaacttcacaacgcactgtcggaatggctattatgataacctcatatttcatcgagtcatcaaaggtttcatgatacaaacaggagatcctttaggagatggtactggtgggcaatctatttggggaagggagtttgaggatgaatttcacaaaagtttacgacatgataggccttttactgtatcaatggcaaatgctggccaaaacacaaatggatctcagttctttatcaccacagtggctactccttggctggacaacaagcacacagtttttggaagagtgatcaagggaatggatgtggttcaggctatagaaaaagtaaagacaaacaaggatgacaagccccaccaagatgtgaaaattctaaatgttactgtccccaagtcttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000413 GO:0003002 GO:0003006 GO:0003674 GO:0003682 GO:0003755 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0006464 GO:0006807 GO:0007275 GO:0007389 GO:0008144 GO:0008150 GO:0008152 GO:0009653 GO:0009791 GO:0009888 GO:0009908 GO:0009909 GO:0009933 GO:0009965 GO:0009987 GO:0010015 GO:0010016 GO:0010051 GO:0010073 GO:0010075 GO:0010082 GO:0010305 GO:0010338 GO:0010358 GO:0016018 GO:0016604 GO:0016853 GO:0016859 GO:0018193 GO:0018208 GO:0019222 GO:0019538 GO:0022414 GO:0022622 GO:0031056 GO:0031060 GO:0031323 GO:0031399 GO:0031974 GO:0031981 GO:0032268 GO:0032501 GO:0032502 GO:0032991 GO:0033043 GO:0033044 GO:0033218 GO:0036211 GO:0040008 GO:0042277 GO:0042393 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0048364 GO:0048366 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048442 GO:0048443 GO:0048444 GO:0048447 GO:0048449 GO:0048453 GO:0048464 GO:0048466 GO:0048467 GO:0048507 GO:0048509 GO:0048532 GO:0048580 GO:0048608 GO:0048638 GO:0048646 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051128 GO:0051171 GO:0051239 GO:0051246 GO:0060255 GO:0061458 GO:0065007 GO:0070013 GO:0071013 GO:0071704 GO:0080090 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0099402 GO:0140096 GO:1901564 GO:1902275 GO:1902494 GO:1905392 GO:1905393 GO:1990904 GO:2000026 GO:2000241 GO:2000280
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pro_isomerase WD40

Protein Analysis

564

Amino Acids

63.61

Weight (kDa)

6.84

Isoelectric Point (pI)

37.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_WDR5 PF25175 2 - 167 3.1e-11 WDR5 beta-propeller domain
Beta-prop_THOC3 PF25174 2 - 229 1.4e-13 THOC3 beta-propeller domain
WD40_Prp19 PF24814 2 - 163 5.4e-07 Prp19 WD40 domain
WDR55 PF24796 13 - 164 3.3e-06 WDR55
Pro_isomerase PF00160 411 - 561 6.1e-57 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 371
AccB1I GGYRCC 1 cut(s) 371
AccB7I CCANNNNNTGG 1 cut(s) 518
AccI GTMKAC 1 cut(s) 288
AccII CGCG 1 cut(s) 116
AciI CCGC 1 cut(s) 38
AclWI GGATC 5 cut(s) 194, 1043, 1056, 1382, 1525
AcoI YGGCCR 3 cut(s) 39, 243, 1501
AcsI RAATTY 7 cut(s) 44, 110, 527, 847, 999, 1445, 1665
AcuI CTGAAG 1 cut(s) 1143
AfaI GTAC 6 cut(s) 187, 348, 373, 735, 743, 1405
AfiI CCNNNNNNNGG 2 cut(s) 13, 518
AflIII ACRYGT 1 cut(s) 649
AgsI TTSAA 8 cut(s) 79, 110, 149, 195, 538, 722, 1075, 1153
AjiI CACGTC 2 cut(s) 13, 630
AjnI CCWGG 3 cut(s) 268, 311, 405
AleI CACNNNNGTG 1 cut(s) 1538
AluBI AGCT 8 cut(s) 158, 461, 748, 755, 843, 1010, 1184, 1270
AluI AGCT 8 cut(s) 158, 461, 748, 755, 843, 1010, 1184, 1270
Alw26I GTCTC 2 cut(s) 3, 1248
AlwI GGATC 5 cut(s) 194, 1043, 1056, 1382, 1525
AlwNI CAGNNNCTG 1 cut(s) 809
AoxI GGCC 6 cut(s) 39, 243, 410, 708, 1472, 1501
ApeKI GCWGC 4 cut(s) 1007, 1010, 1013, 1184
ApoI RAATTY 7 cut(s) 44, 110, 527, 847, 999, 1445, 1665
Asp700I GAANNNNTTC 1 cut(s) 554
Asp718I GGTACC 1 cut(s) 371
AspS9I GGNCC 4 cut(s) 129, 140, 410, 709
AsuC2I CCSGG 1 cut(s) 913
AsuHPI GGTGA 3 cut(s) 624, 983, 1525
AvaII GGWCC 2 cut(s) 129, 140
BaeI ACNNNNGTAYC 2 cut(s) 725, 758
BalI TGGCCA 2 cut(s) 245, 1503
BamHI GGATCC 1 cut(s) 1048
BanI GGYRCC 1 cut(s) 371
BbsI GAAGAC 1 cut(s) 156
BbvI GCAGC 4 cut(s) 997, 1019, 1025, 1171
BccI CCATC 6 cut(s) 62, 164, 235, 329, 602, 1394
BcgI CGANNNNNNTGC 2 cut(s) 94, 128
BciT130I CCWGG 3 cut(s) 270, 313, 407
BciVI GTATCC 2 cut(s) 639, 1284
BclI TGATCA 1 cut(s) 1587
BcnI CCSGG 1 cut(s) 913
BcoDI GTCTC 2 cut(s) 3, 1248
BfaI CTAG 2 cut(s) 155, 920
BfmI CTRYAG 4 cut(s) 579, 1005, 1011, 1614
BfuI GTATCC 2 cut(s) 639, 1284
BglI GCCNNNNNGGC 1 cut(s) 609
BisI GCNGC 5 cut(s) 39, 1008, 1011, 1014, 1185
BlsI GCNGC 5 cut(s) 40, 1009, 1012, 1015, 1186
Bme1390I CCNGG 4 cut(s) 270, 313, 407, 913
Bme18I GGWCC 2 cut(s) 129, 140
BmgBI CACGTC 2 cut(s) 13, 630
BmgT120I GGNCC 4 cut(s) 129, 140, 410, 709
BmiI GGNNCC 5 cut(s) 131, 142, 373, 411, 1050
BmrFI CCNGG 4 cut(s) 270, 313, 407, 913
BmsI GCATC 3 cut(s) 349, 1117, 1196
BoxI GACNNNNGTC 1 cut(s) 765
BpiI GAAGAC 1 cut(s) 156
BpuEI CTTGAG 2 cut(s) 524, 722
BpuMI CCSGG 1 cut(s) 913
BsaAI YACGTR 1 cut(s) 650
BsaJI CCNNGG 5 cut(s) 136, 406, 967, 1134, 1550
Bsc4I CCNNNNNNNGG 2 cut(s) 13, 518
Bse1I ACTGG 3 cut(s) 61, 413, 1411
BseBI CCWGG 3 cut(s) 270, 313, 407
BseDI CCNNGG 5 cut(s) 136, 406, 967, 1134, 1550
BseGI GGATG 7 cut(s) 257, 307, 528, 1214, 1447, 1606, 1645
BseLI CCNNNNNNNGG 2 cut(s) 13, 518
BseMII CTCAG 1 cut(s) 1535
BseNI ACTGG 3 cut(s) 61, 413, 1411
BseX3I CGGCCG 1 cut(s) 39
BseXI GCAGC 4 cut(s) 997, 1019, 1025, 1171
Bsh1236I CGCG 1 cut(s) 116
Bsh1285I CGRYCG 2 cut(s) 42, 769
BshFI GGCC 6 cut(s) 41, 245, 412, 710, 1474, 1503
BshNI GGYRCC 1 cut(s) 371
BsiEI CGRYCG 2 cut(s) 42, 769
BsiSI CCGG 1 cut(s) 913
BslFI GGGAC 3 cut(s) 115, 126, 1667
BslI CCNNNNNNNGG 2 cut(s) 13, 518
BsmAI GTCTC 2 cut(s) 3, 1248
BsmBI CGTCTC 1 cut(s) 3
BsmFI GGGAC 3 cut(s) 115, 126, 1667
BsmI GAATGC 2 cut(s) 829, 1289
BsnI GGCC 6 cut(s) 41, 245, 412, 710, 1474, 1503
Bsp1407I TGTACA 2 cut(s) 185, 346
Bsp143I GATC 5 cut(s) 199, 1048, 1387, 1517, 1587
Bsp68I TCGCGA 1 cut(s) 116
BspACI CCGC 1 cut(s) 38
BspANI GGCC 6 cut(s) 41, 245, 412, 710, 1474, 1503
BspCNI CTCAG 1 cut(s) 1534
BspFNI CGCG 1 cut(s) 116
BspHI TCATGA 3 cut(s) 423, 436, 1371
BspLI GGNNCC 5 cut(s) 131, 142, 373, 411, 1050
BspMAI CTGCAG 2 cut(s) 1009, 1015
BspPI GGATC 5 cut(s) 194, 1043, 1056, 1382, 1525
BspT107I GGYRCC 1 cut(s) 371
BsrGI TGTACA 2 cut(s) 185, 346
BsrI ACTGG 3 cut(s) 61, 413, 1411
BssECI CCNNGG 5 cut(s) 136, 406, 967, 1134, 1550
BssMI GATC 5 cut(s) 199, 1048, 1387, 1517, 1587
BssT1I CCWWGG 4 cut(s) 136, 967, 1134, 1550
Bst2UI CCWGG 3 cut(s) 270, 313, 407
Bst4CI ACNGT 9 cut(s) 451, 583, 641, 1297, 1319, 1483, 1540, 1573, 1681
Bst6I CTCTTC 3 cut(s) 560, 1135, 1576
BstAUI TGTACA 2 cut(s) 185, 346
BstBAI YACGTR 1 cut(s) 650
BstC8I GCNNGC 2 cut(s) 318, 1501
BstDEI CTNAG 2 cut(s) 1180, 1521
BstF5I GGATG 7 cut(s) 257, 307, 528, 1214, 1447, 1606, 1645
BstFNI CGCG 1 cut(s) 116
BstKTI GATC 5 cut(s) 202, 1051, 1390, 1520, 1590
BstMAI GTCTC 2 cut(s) 3, 1248
BstMBI GATC 5 cut(s) 199, 1048, 1387, 1517, 1587
BstMCI CGRYCG 2 cut(s) 42, 769
BstMWI GCNNNNNNNGC 5 cut(s) 35, 164, 317, 609, 1013
BstNI CCWGG 3 cut(s) 270, 313, 407
BstPAI GACNNNNGTC 1 cut(s) 765
BstSCI CCNGG 4 cut(s) 268, 311, 405, 911
BstSFI CTRYAG 4 cut(s) 579, 1005, 1011, 1614
BstUI CGCG 1 cut(s) 116
BstV1I GCAGC 4 cut(s) 997, 1019, 1025, 1171
BstV2I GAAGAC 1 cut(s) 156
BstX2I RGATCY 3 cut(s) 1048, 1387, 1517
BstYI RGATCY 3 cut(s) 1048, 1387, 1517
BstZI CGGCCG 1 cut(s) 39
BsuI GTATCC 2 cut(s) 639, 1284
BsuRI GGCC 6 cut(s) 41, 245, 412, 710, 1474, 1503
BtrI CACGTC 2 cut(s) 13, 630
BtsCI GGATG 7 cut(s) 257, 307, 528, 1214, 1447, 1606, 1645
BtsIMutI CAGTG 5 cut(s) 54, 331, 420, 1315, 1545
BtuMI TCGCGA 1 cut(s) 116
Cac8I GCNNGC 2 cut(s) 318, 1501
CaiI CAGNNNCTG 1 cut(s) 809
CciI TCATGA 3 cut(s) 423, 436, 1371
Cfr13I GGNCC 4 cut(s) 129, 140, 410, 709
Csp6I GTAC 6 cut(s) 186, 347, 372, 734, 742, 1404
CviAII CATG 7 cut(s) 23, 247, 424, 437, 1264, 1372, 1466
CviQI GTAC 6 cut(s) 186, 347, 372, 734, 742, 1404
DdeI CTNAG 2 cut(s) 1180, 1521
DpnI GATC 5 cut(s) 201, 1050, 1389, 1519, 1589
DpnII GATC 5 cut(s) 199, 1048, 1387, 1517, 1587
EaeI YGGCCR 3 cut(s) 39, 243, 1501
EagI CGGCCG 1 cut(s) 39
Eam1104I CTCTTC 3 cut(s) 560, 1135, 1576
EarI CTCTTC 3 cut(s) 560, 1135, 1576
EclXI CGGCCG 1 cut(s) 39
Eco130I CCWWGG 4 cut(s) 136, 967, 1134, 1550
Eco147I AGGCCT 1 cut(s) 1474
Eco47I GGWCC 2 cut(s) 129, 140
Eco52I CGGCCG 1 cut(s) 39
Eco57I CTGAAG 1 cut(s) 1143
EcoO109I RGGNCCY 1 cut(s) 129
EcoRI GAATTC 1 cut(s) 110
EcoRII CCWGG 3 cut(s) 268, 311, 405
EcoT14I CCWWGG 4 cut(s) 136, 967, 1134, 1550
EcoT22I ATGCAT 1 cut(s) 1242
ErhI CCWWGG 4 cut(s) 136, 967, 1134, 1550
Esp3I CGTCTC 1 cut(s) 3
FaeI CATG 7 cut(s) 26, 250, 427, 440, 1267, 1375, 1469
FalI AAGNNNNNCTT 2 cut(s) 300, 332
FaqI GGGAC 3 cut(s) 115, 126, 1667
FatI CATG 7 cut(s) 22, 246, 423, 436, 1263, 1371, 1465
FauNDI CATATG 1 cut(s) 1061
FbaI TGATCA 1 cut(s) 1587
FblI GTMKAC 1 cut(s) 288
Fnu4HI GCNGC 5 cut(s) 39, 1008, 1011, 1014, 1185
FokI GGATG 7 cut(s) 244, 314, 535, 1201, 1454, 1613, 1652
Fsp4HI GCNGC 5 cut(s) 39, 1008, 1011, 1014, 1185
FspBI CTAG 2 cut(s) 155, 920
GluI GCNGC 5 cut(s) 39, 1008, 1011, 1014, 1185
HaeIII GGCC 6 cut(s) 41, 245, 412, 710, 1474, 1503
HapII CCGG 1 cut(s) 913
Hin1II CATG 7 cut(s) 26, 250, 427, 440, 1267, 1375, 1469
HincII GTYRAC 1 cut(s) 229
HindII GTYRAC 1 cut(s) 229
HinfI GANTC 8 cut(s) 250, 490, 534, 550, 695, 916, 1086, 1356
HpaII CCGG 1 cut(s) 913
HphI GGTGA 3 cut(s) 624, 983, 1525
Hpy166II GTNNAC 5 cut(s) 229, 289, 349, 889, 1460
Hpy188I TCNGA 4 cut(s) 1048, 1104, 1192, 1323
Hpy188III TCNNGA 9 cut(s) 115, 424, 437, 701, 1075, 1210, 1223, 1277, 1372
Hpy8I GTNNAC 5 cut(s) 229, 289, 349, 889, 1460
Hpy99I CGWCG 1 cut(s) 684
HpyAV CCTTC 5 cut(s) 463, 728, 1081, 1229, 1422
HpyCH4III ACNGT 9 cut(s) 451, 583, 641, 1297, 1319, 1483, 1540, 1573, 1681
HpyCH4IV ACGT 4 cut(s) 12, 629, 649, 732
HpyCH4V TGCA 9 cut(s) 4, 362, 573, 827, 1007, 1013, 1130, 1187, 1240
HpyF10VI GCNNNNNNNGC 5 cut(s) 35, 164, 317, 609, 1013
HpyF3I CTNAG 2 cut(s) 1180, 1521
HpySE526I ACGT 4 cut(s) 12, 629, 649, 732
Hsp92II CATG 7 cut(s) 26, 250, 427, 440, 1267, 1375, 1469
KpnI GGTACC 1 cut(s) 375
Ksp22I TGATCA 1 cut(s) 1587
Kzo9I GATC 5 cut(s) 199, 1048, 1387, 1517, 1587
Lsp1109I GCAGC 4 cut(s) 997, 1019, 1025, 1171
LweI GCATC 3 cut(s) 349, 1117, 1196
MaeI CTAG 2 cut(s) 155, 920
MaeII ACGT 4 cut(s) 12, 629, 649, 732
MaeIII GTNAC 8 cut(s) 16, 542, 625, 630, 728, 971, 1207, 1675
MalI GATC 5 cut(s) 201, 1050, 1389, 1519, 1589
MboI GATC 5 cut(s) 199, 1048, 1387, 1517, 1587
MflI RGATCY 3 cut(s) 1048, 1387, 1517
MlsI TGGCCA 2 cut(s) 245, 1503
MluNI TGGCCA 2 cut(s) 245, 1503
MlyI GAGTC 1 cut(s) 1365
MmeI TCCRAC 3 cut(s) 887, 1026, 1301
MnlI CCTC 8 cut(s) 214, 589, 697, 1050, 1173, 1273, 1352, 1432
Mox20I TGGCCA 2 cut(s) 245, 1503
Mph1103I ATGCAT 1 cut(s) 1242
MroXI GAANNNNTTC 1 cut(s) 554
MscI TGGCCA 2 cut(s) 245, 1503
MseI TTAA 2 cut(s) 386, 1693
MslI CAYNNNNRTG 4 cut(s) 441, 1262, 1538, 1656
Msp20I TGGCCA 2 cut(s) 245, 1503
MspA1I CMGCKG 3 cut(s) 461, 748, 1010
MspI CCGG 1 cut(s) 913
MspR9I CCNGG 4 cut(s) 270, 313, 407, 913
Mva1269I GAATGC 2 cut(s) 829, 1289
MvaI CCWGG 3 cut(s) 270, 313, 407
MvnI CGCG 1 cut(s) 116
MwoI GCNNNNNNNGC 5 cut(s) 35, 164, 317, 609, 1013
NciI CCSGG 1 cut(s) 913
NdeI CATATG 1 cut(s) 1061
NdeII GATC 5 cut(s) 199, 1048, 1387, 1517, 1587
NlaIII CATG 7 cut(s) 26, 250, 427, 440, 1267, 1375, 1469
NlaIV GGNNCC 5 cut(s) 131, 142, 373, 411, 1050
NmuCI GTSAC 6 cut(s) 542, 625, 630, 728, 971, 1207
NruI TCGCGA 1 cut(s) 116
NsiI ATGCAT 1 cut(s) 1242
OliI CACNNNNGTG 1 cut(s) 1538
PagI TCATGA 3 cut(s) 423, 436, 1371
PceI AGGCCT 1 cut(s) 1474
PctI GAATGC 2 cut(s) 829, 1289
PdmI GAANNNNTTC 1 cut(s) 554
PfeI GAWTC 7 cut(s) 250, 490, 534, 550, 695, 916, 1086
PflFI GACNNNGTC 1 cut(s) 449
PflMI CCANNNNNTGG 1 cut(s) 518
PkrI GCNGC 5 cut(s) 40, 1009, 1012, 1015, 1186
PleI GAGTC 1 cut(s) 1364
PpsI GAGTC 1 cut(s) 1364
Ppu21I YACGTR 1 cut(s) 650
PpuMI RGGWCCY 1 cut(s) 129
PshAI GACNNNNGTC 1 cut(s) 765
Psp5II RGGWCCY 1 cut(s) 129
Psp6I CCWGG 3 cut(s) 268, 311, 405
PspGI CCWGG 3 cut(s) 268, 311, 405
PspN4I GGNNCC 5 cut(s) 131, 142, 373, 411, 1050
PspPI GGNCC 4 cut(s) 129, 140, 410, 709
PspPPI RGGWCCY 1 cut(s) 129
PstI CTGCAG 2 cut(s) 1009, 1015
PstNI CAGNNNCTG 1 cut(s) 809
PsuI RGATCY 3 cut(s) 1048, 1387, 1517
PsyI GACNNNGTC 1 cut(s) 449
PvuII CAGCTG 3 cut(s) 461, 748, 1010
RruI TCGCGA 1 cut(s) 116
RsaI GTAC 6 cut(s) 187, 348, 373, 735, 743, 1405
RsaNI GTAC 6 cut(s) 186, 347, 372, 734, 742, 1404
RseI CAYNNNNRTG 4 cut(s) 441, 1262, 1538, 1656
SaqAI TTAA 2 cut(s) 386, 1693
SatI GCNGC 5 cut(s) 39, 1008, 1011, 1014, 1185
Sau3AI GATC 5 cut(s) 199, 1048, 1387, 1517, 1587
Sau96I GGNCC 4 cut(s) 129, 140, 410, 709
SchI GAGTC 1 cut(s) 1365
ScrFI CCNGG 4 cut(s) 270, 313, 407, 913
SfaNI GCATC 3 cut(s) 349, 1117, 1196
SfcI CTRYAG 4 cut(s) 579, 1005, 1011, 1614
SinI GGWCC 2 cut(s) 129, 140
SmiMI CAYNNNNRTG 4 cut(s) 441, 1262, 1538, 1656
SmlI CTYRAG 2 cut(s) 503, 701
SmoI CTYRAG 2 cut(s) 503, 701
SseBI AGGCCT 1 cut(s) 1474
SsiI CCGC 1 cut(s) 38
SspMI CTAG 2 cut(s) 155, 920
StuI AGGCCT 1 cut(s) 1474
StyD4I CCNGG 4 cut(s) 268, 311, 405, 911
StyI CCWWGG 4 cut(s) 136, 967, 1134, 1550
TaaI ACNGT 9 cut(s) 451, 583, 641, 1297, 1319, 1483, 1540, 1573, 1681
TaiI ACGT 4 cut(s) 15, 632, 652, 735
TaqI TCGA 3 cut(s) 558, 769, 1354
TaqII GACCGA 2 cut(s) 613, 755
TatI WGTACW 2 cut(s) 185, 346
TauI GCSGC 1 cut(s) 41
TfiI GAWTC 7 cut(s) 250, 490, 534, 550, 695, 916, 1086
Tru1I TTAA 2 cut(s) 386, 1693
Tru9I TTAA 2 cut(s) 386, 1693
TscAI CASTG 5 cut(s) 61, 331, 420, 1322, 1545
TseFI GTSAC 6 cut(s) 542, 625, 630, 728, 971, 1207
TseI GCWGC 4 cut(s) 1007, 1010, 1013, 1184
Tsp45I GTSAC 6 cut(s) 542, 625, 630, 728, 971, 1207
TspRI CASTG 5 cut(s) 61, 331, 420, 1322, 1545
Tth111I GACNNNGTC 1 cut(s) 449
Van91I CCANNNNNTGG 1 cut(s) 518
VpaK11BI GGWCC 2 cut(s) 129, 140
XapI RAATTY 7 cut(s) 44, 110, 527, 847, 999, 1445, 1665
XcmI CCANNNNNNNNNTGG 1 cut(s) 1511
XmiI GTMKAC 1 cut(s) 288
XmnI GAANNNNTTC 1 cut(s) 554
XspI CTAG 2 cut(s) 155, 920
Zsp2I ATGCAT 1 cut(s) 1242
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.