protein At4g18490 isoform X1
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g22660 |
| pyrus_communis | pycom05g28180 |
| rosa_chinensis | RchiOBHm_Chr2g0116881 |
| rosa_laevigata | RLG00000018303 |
| rosa_multiflora | Rmu_sc0002177.1_g000017 Rmu_sc0005387.1_g000003 Rmu_sc0006730.1_g000003 |
| rosa_roxburghii | Rroxscaffold_2G00126940 Rroxscaffold_6G00390420 |
| rosa_rugosa | Rorug02G0208900 |
| rosa_samantha | Rh2AG264500 Rh2BG275700 Rh2DG271800 Rh2DG290900 |
| rosa_wichuraiana | Rw2G020810 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 620 |
| AccI | GTMKAC | 2 cut(s) | 241, 250 |
| AciI | CCGC | 1 cut(s) | 637 |
| AcsI | RAATTY | 2 cut(s) | 86, 282 |
| AcuI | CTGAAG | 2 cut(s) | 273, 345 |
| AfaI | GTAC | 2 cut(s) | 102, 462 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 806 |
| AgsI | TTSAA | 3 cut(s) | 10, 281, 579 |
| AjiI | CACGTC | 1 cut(s) | 723 |
| AleI | CACNNNNGTG | 1 cut(s) | 721 |
| AluBI | AGCT | 8 cut(s) | 31, 120, 169, 190, 362, 422, 597, 693 |
| AluI | AGCT | 8 cut(s) | 31, 120, 169, 190, 362, 422, 597, 693 |
| Alw26I | GTCTC | 2 cut(s) | 179, 840 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 193, 365, 422 |
| ApoI | RAATTY | 2 cut(s) | 86, 282 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 858 |
| AsuC2I | CCSGG | 1 cut(s) | 223 |
| AsuHPI | GGTGA | 4 cut(s) | 274, 749, 857, 905 |
| BanII | GRGCYC | 1 cut(s) | 591 |
| BauI | CACGAG | 1 cut(s) | 837 |
| BbsI | GAAGAC | 1 cut(s) | 137 |
| BccI | CCATC | 3 cut(s) | 221, 299, 451 |
| BclI | TGATCA | 1 cut(s) | 871 |
| BcnI | CCSGG | 1 cut(s) | 223 |
| BcoDI | GTCTC | 2 cut(s) | 179, 840 |
| BfaI | CTAG | 2 cut(s) | 14, 144 |
| BfmI | CTRYAG | 2 cut(s) | 238, 592 |
| Bme1390I | CCNGG | 1 cut(s) | 223 |
| BmgBI | CACGTC | 1 cut(s) | 723 |
| BmiI | GGNNCC | 1 cut(s) | 60 |
| BmrFI | CCNGG | 1 cut(s) | 223 |
| BpiI | GAAGAC | 1 cut(s) | 137 |
| Bpu10I | CCTNAGC | 1 cut(s) | 165 |
| BpuMI | CCSGG | 1 cut(s) | 223 |
| BsaBI | GATNNNNATC | 1 cut(s) | 9 |
| BsaJI | CCNNGG | 1 cut(s) | 336 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 806 |
| Bse1I | ACTGG | 1 cut(s) | 786 |
| Bse8I | GATNNNNATC | 1 cut(s) | 9 |
| BseDI | CCNNGG | 1 cut(s) | 336 |
| BseGI | GGATG | 2 cut(s) | 462, 568 |
| BseJI | GATNNNNATC | 1 cut(s) | 9 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 806 |
| BseMII | CTCAG | 3 cut(s) | 117, 184, 185 |
| BseNI | ACTGG | 1 cut(s) | 786 |
| BseYI | CCCAGC | 2 cut(s) | 597, 693 |
| BsgI | GTGCAG | 1 cut(s) | 206 |
| BsiSI | CCGG | 1 cut(s) | 223 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 806 |
| BsmAI | GTCTC | 2 cut(s) | 179, 840 |
| Bsp1286I | GDGCHC | 1 cut(s) | 591 |
| Bsp1407I | TGTACA | 1 cut(s) | 100 |
| Bsp143I | GATC | 1 cut(s) | 871 |
| BspACI | CCGC | 1 cut(s) | 637 |
| BspCNI | CTCAG | 3 cut(s) | 118, 183, 186 |
| BspLI | GGNNCC | 1 cut(s) | 60 |
| BsrGI | TGTACA | 1 cut(s) | 100 |
| BsrI | ACTGG | 1 cut(s) | 786 |
| BssECI | CCNNGG | 1 cut(s) | 336 |
| BssMI | GATC | 1 cut(s) | 871 |
| BssSI | CACGAG | 1 cut(s) | 837 |
| BssT1I | CCWWGG | 1 cut(s) | 336 |
| Bst2BI | CACGAG | 1 cut(s) | 837 |
| Bst4CI | ACNGT | 3 cut(s) | 239, 499, 823 |
| BstAUI | TGTACA | 1 cut(s) | 100 |
| BstC8I | GCNNGC | 1 cut(s) | 612 |
| BstDEI | CTNAG | 5 cut(s) | 126, 165, 170, 194, 827 |
| BstF5I | GGATG | 2 cut(s) | 462, 568 |
| BstKTI | GATC | 1 cut(s) | 874 |
| BstMAI | GTCTC | 2 cut(s) | 179, 840 |
| BstMBI | GATC | 1 cut(s) | 871 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 320, 347, 359, 368, 419, 428, 680 |
| BstNSI | RCATGY | 2 cut(s) | 513, 678 |
| BstSCI | CCNGG | 1 cut(s) | 221 |
| BstSFI | CTRYAG | 2 cut(s) | 238, 592 |
| BstV2I | GAAGAC | 1 cut(s) | 137 |
| BtrI | CACGTC | 1 cut(s) | 723 |
| BtsCI | GGATG | 2 cut(s) | 462, 568 |
| BtsIMutI | CAGTG | 2 cut(s) | 495, 828 |
| Cac8I | GCNNGC | 1 cut(s) | 612 |
| CaiI | CAGNNNCTG | 3 cut(s) | 193, 365, 422 |
| Csp6I | GTAC | 2 cut(s) | 101, 461 |
| CviAII | CATG | 8 cut(s) | 259, 271, 510, 670, 675, 865, 869, 875 |
| CviQI | GTAC | 2 cut(s) | 101, 461 |
| DdeI | CTNAG | 5 cut(s) | 126, 165, 170, 194, 827 |
| DpnI | GATC | 1 cut(s) | 873 |
| DpnII | GATC | 1 cut(s) | 871 |
| DraI | TTTAAA | 1 cut(s) | 346 |
| Eco130I | CCWWGG | 1 cut(s) | 336 |
| Eco24I | GRGCYC | 1 cut(s) | 591 |
| Eco57I | CTGAAG | 2 cut(s) | 273, 345 |
| EcoT14I | CCWWGG | 1 cut(s) | 336 |
| EcoT22I | ATGCAT | 1 cut(s) | 870 |
| EcoT38I | GRGCYC | 1 cut(s) | 591 |
| ErhI | CCWWGG | 1 cut(s) | 336 |
| FaeI | CATG | 8 cut(s) | 262, 274, 513, 673, 678, 868, 872, 878 |
| FatI | CATG | 8 cut(s) | 258, 270, 509, 669, 674, 864, 868, 874 |
| FbaI | TGATCA | 1 cut(s) | 871 |
| FblI | GTMKAC | 2 cut(s) | 241, 250 |
| FokI | GGATG | 2 cut(s) | 469, 575 |
| FriOI | GRGCYC | 1 cut(s) | 591 |
| FspBI | CTAG | 2 cut(s) | 14, 144 |
| GsaI | CCCAGC | 2 cut(s) | 601, 697 |
| HapII | CCGG | 1 cut(s) | 223 |
| Hin1II | CATG | 8 cut(s) | 262, 274, 513, 673, 678, 868, 872, 878 |
| HinfI | GANTC | 2 cut(s) | 109, 633 |
| HpaII | CCGG | 1 cut(s) | 223 |
| HphI | GGTGA | 4 cut(s) | 274, 749, 857, 905 |
| Hpy166II | GTNNAC | 4 cut(s) | 242, 251, 716, 757 |
| Hpy188I | TCNGA | 2 cut(s) | 68, 153 |
| Hpy188III | TCNNGA | 1 cut(s) | 443 |
| Hpy8I | GTNNAC | 4 cut(s) | 242, 251, 716, 757 |
| HpyAV | CCTTC | 5 cut(s) | 123, 297, 585, 596, 810 |
| HpyCH4III | ACNGT | 3 cut(s) | 239, 499, 823 |
| HpyCH4IV | ACGT | 1 cut(s) | 722 |
| HpyCH4V | TGCA | 5 cut(s) | 187, 258, 534, 793, 868 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 320, 347, 359, 368, 419, 428, 680 |
| HpyF3I | CTNAG | 5 cut(s) | 126, 165, 170, 194, 827 |
| HpySE526I | ACGT | 1 cut(s) | 722 |
| Hsp92II | CATG | 8 cut(s) | 262, 274, 513, 673, 678, 868, 872, 878 |
| Ksp22I | TGATCA | 1 cut(s) | 871 |
| Kzo9I | GATC | 1 cut(s) | 871 |
| MaeI | CTAG | 2 cut(s) | 14, 144 |
| MaeII | ACGT | 1 cut(s) | 722 |
| MaeIII | GTNAC | 6 cut(s) | 46, 197, 775, 845, 893, 932 |
| MalI | GATC | 1 cut(s) | 873 |
| MboI | GATC | 1 cut(s) | 871 |
| MboII | GAAGA | 2 cut(s) | 142, 556 |
| MhlI | GDGCHC | 1 cut(s) | 591 |
| MluCI | AATT | 2 cut(s) | 86, 282 |
| MlyI | GAGTC | 1 cut(s) | 118 |
| MmeI | TCCRAC | 2 cut(s) | 258, 610 |
| MnlI | CCTC | 3 cut(s) | 475, 510, 836 |
| Mph1103I | ATGCAT | 1 cut(s) | 870 |
| MroXI | GAANNNNTTC | 1 cut(s) | 858 |
| MseI | TTAA | 3 cut(s) | 92, 345, 921 |
| MslI | CAYNNNNRTG | 2 cut(s) | 721, 873 |
| MspA1I | CMGCKG | 3 cut(s) | 31, 362, 422 |
| MspI | CCGG | 1 cut(s) | 223 |
| MspR9I | CCNGG | 1 cut(s) | 223 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 320, 347, 359, 368, 419, 428, 680 |
| NciI | CCSGG | 1 cut(s) | 223 |
| NdeII | GATC | 1 cut(s) | 871 |
| NlaIII | CATG | 8 cut(s) | 262, 274, 513, 673, 678, 868, 872, 878 |
| NlaIV | GGNNCC | 1 cut(s) | 60 |
| NmuCI | GTSAC | 3 cut(s) | 775, 845, 893 |
| NsiI | ATGCAT | 1 cut(s) | 870 |
| NspI | RCATGY | 2 cut(s) | 513, 678 |
| OliI | CACNNNNGTG | 1 cut(s) | 721 |
| PdmI | GAANNNNTTC | 1 cut(s) | 858 |
| PfeI | GAWTC | 1 cut(s) | 633 |
| PleI | GAGTC | 1 cut(s) | 117 |
| PpsI | GAGTC | 1 cut(s) | 117 |
| PsiI | TTATAA | 1 cut(s) | 620 |
| PspFI | CCCAGC | 2 cut(s) | 597, 693 |
| PspN4I | GGNNCC | 1 cut(s) | 60 |
| PstNI | CAGNNNCTG | 3 cut(s) | 193, 365, 422 |
| PvuII | CAGCTG | 3 cut(s) | 31, 362, 422 |
| RsaI | GTAC | 2 cut(s) | 102, 462 |
| RsaNI | GTAC | 2 cut(s) | 101, 461 |
| RseI | CAYNNNNRTG | 2 cut(s) | 721, 873 |
| SaqAI | TTAA | 3 cut(s) | 92, 345, 921 |
| Sau3AI | GATC | 1 cut(s) | 871 |
| SchI | GAGTC | 1 cut(s) | 118 |
| ScrFI | CCNGG | 1 cut(s) | 223 |
| SduI | GDGCHC | 1 cut(s) | 591 |
| SfcI | CTRYAG | 2 cut(s) | 238, 592 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 721, 873 |
| Sse9I | AATT | 2 cut(s) | 86, 282 |
| SsiI | CCGC | 1 cut(s) | 637 |
| SspI | AATATT | 2 cut(s) | 624, 858 |
| SspMI | CTAG | 2 cut(s) | 14, 144 |
| StyD4I | CCNGG | 1 cut(s) | 221 |
| StyI | CCWWGG | 1 cut(s) | 336 |
| TaaI | ACNGT | 3 cut(s) | 239, 499, 823 |
| TaiI | ACGT | 1 cut(s) | 725 |
| TasI | AATT | 2 cut(s) | 86, 282 |
| TatI | WGTACW | 1 cut(s) | 100 |
| TfiI | GAWTC | 1 cut(s) | 633 |
| Tru1I | TTAA | 3 cut(s) | 92, 345, 921 |
| Tru9I | TTAA | 3 cut(s) | 92, 345, 921 |
| TscAI | CASTG | 2 cut(s) | 502, 828 |
| TseFI | GTSAC | 3 cut(s) | 775, 845, 893 |
| Tsp45I | GTSAC | 3 cut(s) | 775, 845, 893 |
| TspDTI | ATGAA | 3 cut(s) | 405, 483, 579 |
| TspRI | CASTG | 2 cut(s) | 502, 828 |
| XapI | RAATTY | 2 cut(s) | 86, 282 |
| XceI | RCATGY | 2 cut(s) | 513, 678 |
| XmiI | GTMKAC | 2 cut(s) | 241, 250 |
| XmnI | GAANNNNTTC | 1 cut(s) | 858 |
| XspI | CTAG | 2 cut(s) | 14, 144 |
| Zsp2I | ATGCAT | 1 cut(s) | 870 |