Rmu_sc0007404.1_g000015

Xaa-Pro aminopeptidase 3

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007404.1
Physical Location & Seq
Reverse (-)
48171 .. 52645
4475 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007404.1_g000015.1.cds

Sequence Viewer

Length: 1317 bp
atgcggattcttattggaaaacttctgcagagaatttcatacaagcagactattggacgccgtgcattttgcaccaagaacattgttgacattgggcagccaactccttcatctcatccacagttgatgaaagaaggggagattacgcccggcatatctttggaggagtacatattgagaagaaaaaggttgttggatgtgctcccagagaatggcttggccatctttgcagctgcgccggtgaagatgatgaatgatgttgttccttatacgtatcggcaagatgctgattactcgtacattactggctgccagcaacctggtggcgtggcggtcttgggtcatgaatgcggtttttgcatgttcatgcctgaaccaacaactcaagatgtgacttggcaaggacaaactgcaggaattagtgcagcactagaagtatttaaggctgataaagcatatccaatgagcaaattacgggagatcctcccagattttatgaggagatcgtccaagctgttccacaatgtgcagacggctgtaccaacatatatggaattggatgcctttcagaaagcagctacctctggagaagtgaaagatgtttcagttctcacacatcagttacggttgataaagtcatcggcagagctcaagttaatgagagagtctgcagcaattgcttgccaggctctgttgcagaccatgttacattcaaagatacatccttatgagggtatgctttcagctaagatggaatatgaatgcaaaatgaggggtgcccagagaatggcgttcaaccctgtggttggtggagggcctaatgctagtgtaatacattattctcgaaatgatcagaaaataaaggaaggagaacttgtcttgatggatgttggttgcgaatttcatggttatgtcagtgatctaacccgcacctggccaccctgtggaagcttttcttcagctcaagaagagctatatgatcttattctgcgaacaaacaaggaatgcgtgaagctttgcaaacctggtgctaccattcggcaaatacacaacttttctgttgacatgcttcaaaaaggactcaaggagattgggattctgaaggaggactctagacgtagttcccactatcagttgagccgttcctaccatcagctgaaccctacttccataggtcactatctaggaatggatgtccatgattgttctaaggtcagctacgaccatcctttgacgtccggtgttgtgataacaattgaaccaggaatctacatcccattgttctctaatattcctgagaggtactttttagcctag

Protein Analysis

438

Amino Acids

49.14

Weight (kDa)

8.37

Isoelectric Point (pI)

52.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1238
AccB1I GGYRCC 1 cut(s) 776
AccB7I CCANNNNNTGG 3 cut(s) 212, 787, 944
AciI CCGC 4 cut(s) 4, 332, 351, 928
AclWI GGATC 1 cut(s) 475
AcoI YGGCCR 2 cut(s) 219, 935
AcsI RAATTY 2 cut(s) 33, 899
AcuI CTGAAG 2 cut(s) 942, 1121
AcyI GRCGYC 2 cut(s) 58, 1235
AdeI CACNNNGTG 2 cut(s) 526, 944
AfaI GTAC 4 cut(s) 170, 299, 540, 1304
AfiI CCNNNNNNNGG 6 cut(s) 212, 731, 787, 806, 933, 944
AgsI TTSAA 4 cut(s) 714, 796, 1073, 1259
AjnI CCWGG 5 cut(s) 319, 684, 932, 1024, 1261
AloI GAACNNNNNNTCC 2 cut(s) 1151, 1183
Alw21I GWGCWC 2 cut(s) 204, 651
AlwI GGATC 1 cut(s) 475
AlwNI CAGNNNCTG 1 cut(s) 691
AoxI GGCC 3 cut(s) 219, 815, 935
ApeKI GCWGC 7 cut(s) 97, 230, 233, 309, 425, 575, 671
ApoI RAATTY 2 cut(s) 33, 899
Asp700I GAANNNNTTC 1 cut(s) 952
AspLEI GCGC 1 cut(s) 238
AspS9I GGNCC 1 cut(s) 815
AsuC2I CCSGG 1 cut(s) 150
AsuHPI GGTGA 1 cut(s) 253
BaeGI GKGCMC 1 cut(s) 781
BaeI ACNNNNGTAYC 2 cut(s) 522, 555
BalI TGGCCA 2 cut(s) 221, 937
BanI GGYRCC 1 cut(s) 776
BanII GRGCYC 1 cut(s) 651
Bbv12I GWGCWC 2 cut(s) 204, 651
BbvI GCAGC 7 cut(s) 109, 220, 242, 296, 437, 587, 683
BccI CCATC 5 cut(s) 230, 745, 877, 1158, 1233
BceAI ACGGC 3 cut(s) 45, 549, 1125
BciT130I CCWGG 5 cut(s) 321, 686, 934, 1026, 1263
BclI TGATCA 1 cut(s) 850
BcnI CCSGG 1 cut(s) 150
BfaI CTAG 5 cut(s) 431, 825, 1113, 1184, 1315
BfmI CTRYAG 3 cut(s) 26, 411, 669
BisI GCNGC 7 cut(s) 98, 231, 234, 310, 426, 576, 672
BlsI GCNGC 7 cut(s) 99, 232, 235, 311, 427, 577, 673
Bme1390I CCNGG 6 cut(s) 150, 321, 686, 934, 1026, 1263
BmgT120I GGNCC 1 cut(s) 815
BmiI GGNNCC 1 cut(s) 778
BmrFI CCNGG 6 cut(s) 150, 321, 686, 934, 1026, 1263
BmsI GCATC 2 cut(s) 274, 550
BpmI CTGGAG 1 cut(s) 606
BpuEI CTTGAG 4 cut(s) 369, 635, 948, 1067
BpuMI CCSGG 1 cut(s) 150
BsaAI YACGTR 1 cut(s) 273
BsaHI GRCGYC 2 cut(s) 58, 1235
BsaWI WCCGGW 1 cut(s) 1238
BsaXI ACNNNNNCTCC 2 cut(s) 861, 891
Bsc4I CCNNNNNNNGG 6 cut(s) 212, 731, 787, 806, 933, 944
Bse118I RCCGGY 1 cut(s) 238
Bse1I ACTGG 1 cut(s) 310
BseBI CCWGG 5 cut(s) 321, 686, 934, 1026, 1263
BseGI GGATG 8 cut(s) 115, 202, 565, 721, 892, 1198, 1225, 1272
BseLI CCNNNNNNNGG 6 cut(s) 212, 731, 787, 806, 933, 944
BseMII CTCAG 1 cut(s) 1287
BseNI ACTGG 1 cut(s) 310
BseRI GAGGAG 2 cut(s) 179, 514
BseSI GKGCMC 1 cut(s) 781
BseXI GCAGC 7 cut(s) 109, 220, 242, 296, 437, 587, 683
BsgI GTGCAG 2 cut(s) 444, 548
BshFI GGCC 3 cut(s) 221, 817, 937
BshNI GGYRCC 1 cut(s) 776
BsiHKAI GWGCWC 2 cut(s) 204, 651
BsiSI CCGG 3 cut(s) 150, 239, 1239
BslI CCNNNNNNNGG 6 cut(s) 212, 731, 787, 806, 933, 944
BsmI GAATGC 3 cut(s) 353, 767, 1010
BsnI GGCC 3 cut(s) 221, 817, 937
Bsp1286I GDGCHC 3 cut(s) 204, 651, 781
Bsp143I GATC 5 cut(s) 480, 503, 850, 919, 979
BspACI CCGC 4 cut(s) 4, 332, 351, 928
BspANI GGCC 3 cut(s) 221, 817, 937
BspCNI CTCAG 1 cut(s) 1288
BspHI TCATGA 1 cut(s) 343
BspLI GGNNCC 1 cut(s) 778
BspMAI CTGCAG 3 cut(s) 30, 415, 673
BspPI GGATC 1 cut(s) 475
BspQI GCTCTTC 1 cut(s) 963
BspT107I GGYRCC 1 cut(s) 776
BsrFI RCCGGY 1 cut(s) 238
BsrI ACTGG 1 cut(s) 310
BssAI RCCGGY 1 cut(s) 238
BssMI GATC 5 cut(s) 480, 503, 850, 919, 979
BssNI GRCGYC 2 cut(s) 58, 1235
Bst2UI CCWGG 5 cut(s) 321, 686, 934, 1026, 1263
Bst4CI ACNGT 2 cut(s) 123, 627
Bst6I CTCTTC 1 cut(s) 963
BstACI GRCGYC 2 cut(s) 58, 1235
BstAPI GCANNNNNTGC 1 cut(s) 677
BstBAI YACGTR 1 cut(s) 273
BstC8I GCNNGC 2 cut(s) 314, 682
BstDEI CTNAG 3 cut(s) 747, 1209, 1296
BstF5I GGATG 8 cut(s) 115, 202, 565, 721, 892, 1198, 1225, 1272
BstHHI GCGC 1 cut(s) 238
BstKTI GATC 5 cut(s) 483, 506, 853, 922, 982
BstMBI GATC 5 cut(s) 480, 503, 850, 919, 979
BstMWI GCNNNNNNNGC 5 cut(s) 227, 357, 452, 677, 686
BstNI CCWGG 5 cut(s) 321, 686, 934, 1026, 1263
BstNSI RCATGY 2 cut(s) 364, 1069
BstSCI CCNGG 6 cut(s) 148, 319, 684, 932, 1024, 1261
BstSFI CTRYAG 3 cut(s) 26, 411, 669
BstSLI GKGCMC 1 cut(s) 781
BstSNI TACGTA 1 cut(s) 273
BstV1I GCAGC 7 cut(s) 109, 220, 242, 296, 437, 587, 683
BstX2I RGATCY 1 cut(s) 480
BstXI CCANNNNNNTGG 1 cut(s) 320
BstYI RGATCY 1 cut(s) 480
BsuRI GGCC 3 cut(s) 221, 817, 937
BtsCI GGATG 8 cut(s) 115, 202, 565, 721, 892, 1198, 1225, 1272
BtsIMutI CAGTG 1 cut(s) 922
Cac8I GCNNGC 2 cut(s) 314, 682
CaiI CAGNNNCTG 1 cut(s) 691
CciI TCATGA 1 cut(s) 343
CfoI GCGC 1 cut(s) 238
Cfr10I RCCGGY 1 cut(s) 238
Cfr13I GGNCC 1 cut(s) 815
CseI GACGC 1 cut(s) 66
CsiI ACCWGGT 2 cut(s) 319, 1024
Csp6I GTAC 4 cut(s) 169, 298, 539, 1303
CviAII CATG 7 cut(s) 344, 361, 367, 703, 905, 1066, 1199
CviQI GTAC 4 cut(s) 169, 298, 539, 1303
DdeI CTNAG 3 cut(s) 747, 1209, 1296
DpnI GATC 5 cut(s) 482, 505, 852, 921, 981
DpnII GATC 5 cut(s) 480, 503, 850, 919, 979
DraIII CACNNNGTG 2 cut(s) 526, 944
EaeI YGGCCR 2 cut(s) 219, 935
Eam1104I CTCTTC 1 cut(s) 963
EarI CTCTTC 1 cut(s) 963
Ecl136II GAGCTC 1 cut(s) 649
Eco105I TACGTA 1 cut(s) 273
Eco24I GRGCYC 1 cut(s) 651
Eco53kI GAGCTC 1 cut(s) 649
Eco57I CTGAAG 2 cut(s) 942, 1121
EcoICRI GAGCTC 1 cut(s) 649
EcoO109I RGGNCCY 1 cut(s) 815
EcoRII CCWGG 5 cut(s) 319, 684, 932, 1024, 1261
EcoT38I GRGCYC 1 cut(s) 651
FaeI CATG 7 cut(s) 347, 364, 370, 706, 908, 1069, 1202
FalI AAGNNNNNCTT 4 cut(s) 858, 890, 940, 972
FatI CATG 7 cut(s) 343, 360, 366, 702, 904, 1065, 1198
FauI CCCGC 1 cut(s) 935
FbaI TGATCA 1 cut(s) 850
Fnu4HI GCNGC 7 cut(s) 98, 231, 234, 310, 426, 576, 672
FokI GGATG 8 cut(s) 102, 209, 572, 708, 899, 1205, 1212, 1259
FriOI GRGCYC 1 cut(s) 651
Fsp4HI GCNGC 7 cut(s) 98, 231, 234, 310, 426, 576, 672
FspBI CTAG 5 cut(s) 431, 825, 1113, 1184, 1315
GlaI GCGC 1 cut(s) 237
GluI GCNGC 7 cut(s) 98, 231, 234, 310, 426, 576, 672
GsuI CTGGAG 1 cut(s) 606
HaeIII GGCC 3 cut(s) 221, 817, 937
HapII CCGG 3 cut(s) 150, 239, 1239
HgaI GACGC 1 cut(s) 66
HhaI GCGC 1 cut(s) 238
Hin1I GRCGYC 2 cut(s) 58, 1235
Hin1II CATG 7 cut(s) 347, 364, 370, 706, 908, 1069, 1202
Hin6I GCGC 1 cut(s) 236
HinP1I GCGC 1 cut(s) 236
HincII GTYRAC 2 cut(s) 88, 1063
HindII GTYRAC 2 cut(s) 88, 1063
HindIII AAGCTT 2 cut(s) 949, 1013
HinfI GANTC 6 cut(s) 7, 665, 1080, 1096, 1109, 1266
HpaII CCGG 3 cut(s) 150, 239, 1239
HphI GGTGA 1 cut(s) 253
Hpy166II GTNNAC 2 cut(s) 88, 1063
Hpy188I TCNGA 3 cut(s) 570, 855, 1101
Hpy188III TCNNGA 8 cut(s) 344, 386, 585, 843, 880, 965, 1113, 1295
Hpy8I GTNNAC 2 cut(s) 88, 1063
HpyAV CCTTC 4 cut(s) 117, 128, 860, 1096
HpyCH4III ACNGT 2 cut(s) 123, 627
HpyCH4IV ACGT 3 cut(s) 272, 1117, 1235
HpyF10VI GCNNNNNNNGC 5 cut(s) 227, 357, 452, 677, 686
HpyF3I CTNAG 3 cut(s) 747, 1209, 1296
HpySE526I ACGT 3 cut(s) 272, 1117, 1235
Hsp92I GRCGYC 2 cut(s) 58, 1235
Hsp92II CATG 7 cut(s) 347, 364, 370, 706, 908, 1069, 1202
HspAI GCGC 1 cut(s) 236
Ksp22I TGATCA 1 cut(s) 850
Kzo9I GATC 5 cut(s) 480, 503, 850, 919, 979
LguI GCTCTTC 1 cut(s) 963
LmnI GCTCC 1 cut(s) 207
Lsp1109I GCAGC 7 cut(s) 109, 220, 242, 296, 437, 587, 683
LweI GCATC 2 cut(s) 274, 550
MabI ACCWGGT 2 cut(s) 319, 1024
MaeI CTAG 5 cut(s) 431, 825, 1113, 1184, 1315
MaeII ACGT 3 cut(s) 272, 1117, 1235
MaeIII GTNAC 4 cut(s) 391, 621, 705, 1175
MalI GATC 5 cut(s) 482, 505, 852, 921, 981
MboI GATC 5 cut(s) 480, 503, 850, 919, 979
MboII GAAGA 4 cut(s) 192, 256, 948, 980
MfeI CAATTG 2 cut(s) 675, 1254
MflI RGATCY 1 cut(s) 480
MhlI GDGCHC 3 cut(s) 204, 651, 781
MlsI TGGCCA 2 cut(s) 221, 937
MluCI AATT 7 cut(s) 33, 417, 470, 554, 675, 899, 1254
MluNI TGGCCA 2 cut(s) 221, 937
MlyI GAGTC 3 cut(s) 674, 1074, 1103
MmeI TCCRAC 1 cut(s) 174
MnlI CCTC 9 cut(s) 157, 492, 494, 592, 724, 765, 806, 1099, 1293
Mox20I TGGCCA 2 cut(s) 221, 937
MroXI GAANNNNTTC 1 cut(s) 952
MscI TGGCCA 2 cut(s) 221, 937
MseI TTAA 2 cut(s) 441, 656
MslI CAYNNNNRTG 3 cut(s) 365, 726, 909
Msp20I TGGCCA 2 cut(s) 221, 937
MspA1I CMGCKG 2 cut(s) 233, 1156
MspI CCGG 3 cut(s) 150, 239, 1239
MspR9I CCNGG 6 cut(s) 150, 321, 686, 934, 1026, 1263
MunI CAATTG 2 cut(s) 675, 1254
Mva1269I GAATGC 3 cut(s) 353, 767, 1010
MvaI CCWGG 5 cut(s) 321, 686, 934, 1026, 1263
MwoI GCNNNNNNNGC 5 cut(s) 227, 357, 452, 677, 686
NciI CCSGG 1 cut(s) 150
NdeII GATC 5 cut(s) 480, 503, 850, 919, 979
NlaIII CATG 7 cut(s) 347, 364, 370, 706, 908, 1069, 1202
NlaIV GGNNCC 1 cut(s) 778
NmuCI GTSAC 2 cut(s) 391, 1175
NspI RCATGY 2 cut(s) 364, 1069
PagI TCATGA 1 cut(s) 343
PciSI GCTCTTC 1 cut(s) 963
PctI GAATGC 3 cut(s) 353, 767, 1010
PdmI GAANNNNTTC 1 cut(s) 952
PfeI GAWTC 3 cut(s) 7, 1096, 1266
PflMI CCANNNNNTGG 3 cut(s) 212, 787, 944
PkrI GCNGC 7 cut(s) 99, 232, 235, 311, 427, 577, 673
PleI GAGTC 3 cut(s) 673, 1074, 1103
PpsI GAGTC 3 cut(s) 673, 1074, 1103
Ppu21I YACGTR 1 cut(s) 273
Psp124BI GAGCTC 1 cut(s) 651
Psp6I CCWGG 5 cut(s) 319, 684, 932, 1024, 1261
PspGI CCWGG 5 cut(s) 319, 684, 932, 1024, 1261
PspN4I GGNNCC 1 cut(s) 778
PspPI GGNCC 1 cut(s) 815
PstI CTGCAG 3 cut(s) 30, 415, 673
PstNI CAGNNNCTG 1 cut(s) 691
PsuI RGATCY 1 cut(s) 480
PvuII CAGCTG 2 cut(s) 233, 1156
RsaI GTAC 4 cut(s) 170, 299, 540, 1304
RsaNI GTAC 4 cut(s) 169, 298, 539, 1303
RseI CAYNNNNRTG 3 cut(s) 365, 726, 909
SacI GAGCTC 1 cut(s) 651
SapI GCTCTTC 1 cut(s) 963
SaqAI TTAA 2 cut(s) 441, 656
SatI GCNGC 7 cut(s) 98, 231, 234, 310, 426, 576, 672
Sau3AI GATC 5 cut(s) 480, 503, 850, 919, 979
Sau96I GGNCC 1 cut(s) 815
SchI GAGTC 3 cut(s) 674, 1074, 1103
ScrFI CCNGG 6 cut(s) 150, 321, 686, 934, 1026, 1263
SduI GDGCHC 3 cut(s) 204, 651, 781
SexAI ACCWGGT 2 cut(s) 319, 1024
SfaNI GCATC 2 cut(s) 274, 550
SfcI CTRYAG 3 cut(s) 26, 411, 669
SgrAI CRCCGGYG 1 cut(s) 238
SmiMI CAYNNNNRTG 3 cut(s) 365, 726, 909
SmlI CTYRAG 4 cut(s) 384, 650, 963, 1082
SmoI CTYRAG 4 cut(s) 384, 650, 963, 1082
SnaBI TACGTA 1 cut(s) 273
Sse9I AATT 7 cut(s) 33, 417, 470, 554, 675, 899, 1254
SsiI CCGC 4 cut(s) 4, 332, 351, 928
SspI AATATT 1 cut(s) 1291
SspMI CTAG 5 cut(s) 431, 825, 1113, 1184, 1315
SstI GAGCTC 1 cut(s) 651
StyD4I CCNGG 6 cut(s) 148, 319, 684, 932, 1024, 1261
TaaI ACNGT 2 cut(s) 123, 627
TaiI ACGT 3 cut(s) 275, 1120, 1238
TaqI TCGA 1 cut(s) 844
TasI AATT 7 cut(s) 33, 417, 470, 554, 675, 899, 1254
TatI WGTACW 1 cut(s) 168
TfiI GAWTC 3 cut(s) 7, 1096, 1266
Tru1I TTAA 2 cut(s) 441, 656
Tru9I TTAA 2 cut(s) 441, 656
TscAI CASTG 1 cut(s) 922
TseFI GTSAC 2 cut(s) 391, 1175
TseI GCWGC 7 cut(s) 97, 230, 233, 309, 425, 575, 671
Tsp45I GTSAC 2 cut(s) 391, 1175
TspDTI ATGAA 8 cut(s) 27, 99, 143, 266, 355, 360, 774, 893
TspRI CASTG 1 cut(s) 922
Van91I CCANNNNNTGG 3 cut(s) 212, 787, 944
XapI RAATTY 2 cut(s) 33, 899
XbaI TCTAGA 1 cut(s) 1112
XceI RCATGY 2 cut(s) 364, 1069
XcmI CCANNNNNNNNNTGG 1 cut(s) 320
XmnI GAANNNNTTC 1 cut(s) 952
XspI CTAG 5 cut(s) 431, 825, 1113, 1184, 1315
ZraI GACGTC 1 cut(s) 1236
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.