Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3A

Orthogroup ID

OG0006224

Physical Location & Seq

Genomic Coordinates Forward (+)

6560667 .. 6568076

Gene Structure 7410 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3AG081400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2019 bp

ATGCGGATTCTTATTGGAAAACTTCTGCAGAGAATTTCATACAAGCAGACTATTGGACGCCGTGCATTTTGCACCAAGAACATTGTTGACATTGGGCAGCCAACTCCTTCATCTCATCCACAGTTGATGAAAGAAGGGGAGATTACGCCCGGCATATCTTTGGAGGAATACATATTGAGAAGAAAAAGGTTGTTGGATGTGCTCCCAGAGAATGGCTTGGCCATCTTTGCAGCTGCGCCGGTGAAGATGATGAATGATGTTGTTCCTTATACGTATCGGCAAGATGCTGATTACTCGTACATTACTGGCTGCCAGCAACCTGGTGGCGTGGCGGTCTTGGGTCATGAATGCGGTTTTTGCATGTTCATGCCTGAACCAACAACTCAAATCCTCCCAGATTTTATGAGGAGATCGTCCAAGCTGTTCCACAATGTGCAGACGGCTGTACCAACATATATGGAATTGGATGCCTTTCAGAAAGCAGCTACCTCTGGAGAAGTGAAAGATGTTTCAGTTCTCACACATCAGTTACGGTTGATAAAGTCATCGGCAGAGCTCAAGTTAATGAGAGAGTCTGCAGCAATTGCTTGCCAGGCTCTCTTGCAGACAATGTTACATTCAAAGATACATCCATATGAGGGTATGCTTTCAGCTAAGATGGAATATGAATGCAAAATGAGGGGTGCCCAGAGAATGGCGTTCAACCCTGTGGTTGGTGGAGGGCCTAATGCTAGTGTAATACATTATTCTCGAAATGATCAGAAAATAAAGGAAGGAGATCTTGTCTTGATGGATGTTGGTTGCGAATTTCATGGTTATGTCAGTGATCTAACCCGCACCTGGCCACCCTGTGGAAGCTTTTCTTCAGCTCAAGAAGAGCTATATGATCTTATTCTGCAAACAAACAAGGAATGTGTGAAGCTTTGCAAACCTGGTGCTACCATTCGGCAAATACACAACTTTTCTGTTGACATGCTTCAAAAAGGACTCAAGGAGATTGGGATTCTGAAGGAGGACTCTAGACGTAGTTCCCACTATCAGTTGAGCCGTTCCTACCATCAGCTGAACCCTACTTCCATAGGTCACTATCTAGGAATGGATGTCCATGATTGTTCTAAGGTCAGCTACGACCATCCTTTGACGTCCGGTGTTGTGATAACAATTGAACCAGGAATCTACATCCCATTGTTCTCTAATATTCCTGAGAGGTATCAAGGCATCGGGATAAGGATTGAGGATGAGGTCCTTATTACAGACACGGGTTGTGAGGTCCTAACTGGGTCAATTCCAAAAGAAGTTAAACATATTGAATCCTTGCTAAACAACTTTCATCATGGATCTGTAATGGAGAGCCACAATCTGCTAGCTATATATATCCTCTGCTGTCTGAATCCTCCATCTCATCGCGGATCTGCTTTCACAGCCCACCCAGATCAGTTTGTGCAGATTCAGAGACGATTAGTTGGTGCCAATGGGAACAGCTGCAGTGGAAAGGGTACCCAATGTGCAAACATTGTTAAGCATTTTGGGTACACCCATCTCAGTGCTGGTGATCTTCTACGAGCTGAAAGGAATTCTGGTTCTGAAAATGGAACCATGATTTCGAACATGATCAAAGAAGGACAAATTGTTCCTGCGGTGGTGACGATTAAGCTTCTGGAGCGAGCAATGCTGGAGAGTGGTAATGACAAGTTTCTCATTGATGGGTTTCCTCGTAATGAAGAAAACCGTGCTGCATTTGAGGATGTGACTAAAATCATGCCCTCATTCGTCCTGTATTTTGATTGTTCTGAAGAGGAGATGGAGAGGCGCCTTTTGAGTAGGAACCAGGGGAGAGAGGATGATAATGTAGAAACAATAAGGAAGAGGTTTAAGGTTTTTCTGGAGTCTACTCAAAAAGTTTTAGAGTACTATAACGCCCAGGGGAAGGTTCGAAAGATTGATGCTGGGAGGCCTGTTGAAGAGGTTTTCGAGTCAGTGAAAGGCATTTTTGGCCCCAAAAATGAGAAGGCCGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003008 GO:0003014 GO:0003094 GO:0003674 GO:0003824 GO:0004177 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008235 GO:0008237 GO:0008238 GO:0010467 GO:0016485 GO:0016787 GO:0019538 GO:0030145 GO:0031647 GO:0032501 GO:0042802 GO:0042803 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046872 GO:0046914 GO:0046983 GO:0050821 GO:0051604 GO:0065007 GO:0065008 GO:0070006 GO:0070011 GO:0071704 GO:0097205 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AMP_N Peptidase_M24

Protein Analysis

672

Amino Acids

75.35

Weight (kDa)

6.89

Isoelectric Point (pI)

46.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMP_N	PF05195	57 - 127	2.1e-17	Aminopeptidase P, N-terminal domain
Peptidase_M24	PF00557	188 - 419	1.3e-52	Metallopeptidase family M24
AAA_33	PF13671	490 - 624	5e-06	AAA domain
ADK	PF00406	492 - 642	5.7e-41	Adenylate kinase
AAA_17	PF13207	494 - 621	1.9e-31	AAA domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0006224)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G09300 AT1G09300
fragaria_vesca	FvH4_6g07800 FvH4_6g07800 FvH4_6g07800 FvH4_6g07800 FvH4_6g07800
malus_domestica	MD04G1191800.v1.1
prunus_persica	Prupe.6G310400_v2.0.a1 Prupe.6G310400_v2.0.a1 Prupe.6G310400_v2.0.a1 Prupe.6G310400_v2.0.a1 Prupe.6G310400_v2.0.a1
pyrus_communis	pycom12g19110 pycom12g19120
rosa_chinensis	RchiOBHm_Chr3g0457511
rosa_laevigata	RLG00000025217
rosa_multiflora	Rmu_sc0007404.1_g000015 Rmu_sc0038466.1_g000001
rosa_roxburghii	Rroxscaffold_6G00421810
rosa_rugosa	Rorug03G0020600 Rorug03G0020900
rosa_samantha	Rh3AG081400 Rh3BG083500 Rh3CG083700 Rh3DG085100
rosa_wichuraiana	Rw3G006980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1145
Acc65I	GGTACC	1 cut(s)	1496
AccB1I	GGYRCC	4 cut(s)	683, 1466, 1496, 1809
AccB7I	CCANNNNNTGG	3 cut(s)	212, 694, 851
AccI	GTMKAC	1 cut(s)	1889
AccII	CGCG	1 cut(s)	1407
AciI	CCGC	6 cut(s)	4, 332, 351, 835, 1407, 1637
AclWI	GGATC	2 cut(s)	1345, 1417
AcoI	YGGCCR	2 cut(s)	219, 842
AcsI	RAATTY	3 cut(s)	33, 806, 1573
AcuI	CTGAAG	3 cut(s)	849, 1028, 1812
AcyI	GRCGYC	3 cut(s)	58, 1142, 1810
AdeI	CACNNNGTG	2 cut(s)	433, 851
AfaI	GTAC	5 cut(s)	299, 447, 1498, 1532, 1910
AfiI	CCNNNNNNNGG	7 cut(s)	212, 638, 694, 713, 840, 851, 1927
AgsI	TTSAA	6 cut(s)	621, 703, 980, 1166, 1310, 1961
AjnI	CCWGG	7 cut(s)	319, 591, 839, 931, 1168, 1827, 1920
AloI	GAACNNNNNNTCC	6 cut(s)	1058, 1090, 1564, 1596, 1614, 1646
Alw21I	GWGCWC	2 cut(s)	204, 558
Alw26I	GTCTC	1 cut(s)	1447
AlwI	GGATC	2 cut(s)	1345, 1417
AoxI	GGCC	6 cut(s)	219, 722, 842, 1952, 1993, 2010
ApeKI	GCWGC	8 cut(s)	97, 230, 233, 309, 482, 578, 1482, 1733
ApoI	RAATTY	3 cut(s)	33, 806, 1573
Asp700I	GAANNNNTTC	1 cut(s)	859
Asp718I	GGTACC	1 cut(s)	1496
AspLEI	GCGC	2 cut(s)	238, 1812
AspS9I	GGNCC	4 cut(s)	722, 1243, 1270, 1994
AsuC2I	CCSGG	1 cut(s)	150
AsuHPI	GGTGA	3 cut(s)	253, 1562, 1654
AsuII	TTCGAA	2 cut(s)	1604, 1933
AsuNHI	GCTAGC	1 cut(s)	1363
AvaII	GGWCC	2 cut(s)	1243, 1270
BaeGI	GKGCMC	1 cut(s)	688
BaeI	ACNNNNGTAYC	2 cut(s)	429, 462
BalI	TGGCCA	2 cut(s)	221, 844
BanI	GGYRCC	4 cut(s)	683, 1466, 1496, 1809
BanII	GRGCYC	1 cut(s)	558
Bbv12I	GWGCWC	2 cut(s)	204, 558
BbvI	GCAGC	8 cut(s)	109, 220, 242, 296, 494, 590, 1469, 1720
BccI	CCATC	9 cut(s)	230, 652, 784, 1065, 1140, 1405, 1545, 1697, 1795
BceAI	ACGGC	3 cut(s)	45, 456, 1032
BciT130I	CCWGG	7 cut(s)	321, 593, 841, 933, 1170, 1829, 1922
BclI	TGATCA	2 cut(s)	757, 1611
BcnI	CCSGG	1 cut(s)	150
BcoDI	GTCTC	1 cut(s)	1447
BfaI	CTAG	4 cut(s)	732, 1020, 1091, 1364
BfmI	CTRYAG	3 cut(s)	26, 576, 1483
BfoI	RGCGCY	1 cut(s)	1813
BglII	AGATCT	1 cut(s)	778
BisI	GCNGC	8 cut(s)	98, 231, 234, 310, 483, 579, 1483, 1734
BlsI	GCNGC	8 cut(s)	99, 232, 235, 311, 484, 580, 1484, 1735
BmcAI	AGTACT	1 cut(s)	1910
Bme1390I	CCNGG	8 cut(s)	150, 321, 593, 841, 933, 1170, 1829, 1922
Bme18I	GGWCC	2 cut(s)	1243, 1270
BmgT120I	GGNCC	4 cut(s)	722, 1243, 1270, 1994
BmiI	GGNNCC	7 cut(s)	685, 1468, 1498, 1594, 1811, 1826, 1996
BmrFI	CCNGG	8 cut(s)	150, 321, 593, 841, 933, 1170, 1829, 1922
BmrI	ACTGGG	1 cut(s)	1287
BmsI	GCATC	4 cut(s)	274, 457, 1227, 1933
BmtI	GCTAGC	1 cut(s)	1367
BmuI	ACTGGG	1 cut(s)	1287
BpmI	CTGGAG	4 cut(s)	513, 1679, 1694, 1904
Bpu14I	TTCGAA	2 cut(s)	1604, 1933
BpuEI	CTTGAG	3 cut(s)	542, 855, 974
BpuMI	CCSGG	1 cut(s)	150
BsaAI	YACGTR	1 cut(s)	273
BsaHI	GRCGYC	3 cut(s)	58, 1142, 1810
BsaJI	CCNNGG	3 cut(s)	1828, 1920, 1921
BsaWI	WCCGGW	1 cut(s)	1145
BsaXI	ACNNNNNCTCC	2 cut(s)	768, 798
Bsc4I	CCNNNNNNNGG	7 cut(s)	212, 638, 694, 713, 840, 851, 1927
Bse118I	RCCGGY	1 cut(s)	238
Bse1I	ACTGG	2 cut(s)	310, 1282
Bse3DI	GCAATG	1 cut(s)	1674
BseBI	CCWGG	7 cut(s)	321, 593, 841, 933, 1170, 1829, 1922
BseDI	CCNNGG	3 cut(s)	1828, 1920, 1921
BseLI	CCNNNNNNNGG	7 cut(s)	212, 638, 694, 713, 840, 851, 1927
BseMI	GCAATG	1 cut(s)	1674
BseMII	CTCAG	2 cut(s)	1194, 1555
BseNI	ACTGG	2 cut(s)	310, 1282
BseRI	GAGGAG	2 cut(s)	421, 1811
BseSI	GKGCMC	1 cut(s)	688
BseXI	GCAGC	8 cut(s)	109, 220, 242, 296, 494, 590, 1469, 1720
BseYI	CCCAGC	1 cut(s)	1946
BsgI	GTGCAG	2 cut(s)	455, 1463
Bsh1236I	CGCG	1 cut(s)	1407
BshFI	GGCC	6 cut(s)	221, 724, 844, 1954, 1995, 2012
BshNI	GGYRCC	4 cut(s)	683, 1466, 1496, 1809
BsiHKAI	GWGCWC	2 cut(s)	204, 558
BsiSI	CCGG	3 cut(s)	150, 239, 1146
BslI	CCNNNNNNNGG	7 cut(s)	212, 638, 694, 713, 840, 851, 1927
BsmAI	GTCTC	1 cut(s)	1447
BsmBI	CGTCTC	1 cut(s)	1447
BsmI	GAATGC	2 cut(s)	353, 674
BsnI	GGCC	6 cut(s)	221, 724, 844, 1954, 1995, 2012
Bsp119I	TTCGAA	2 cut(s)	1604, 1933
Bsp1286I	GDGCHC	3 cut(s)	204, 558, 688
BspACI	CCGC	6 cut(s)	4, 332, 351, 835, 1407, 1637
BspANI	GGCC	6 cut(s)	221, 724, 844, 1954, 1995, 2012
BspCNI	CTCAG	2 cut(s)	1195, 1554
BspFNI	CGCG	1 cut(s)	1407
BspHI	TCATGA	1 cut(s)	343
BspLI	GGNNCC	7 cut(s)	685, 1468, 1498, 1594, 1811, 1826, 1996
BspMAI	CTGCAG	3 cut(s)	30, 580, 1487
BspOI	GCTAGC	1 cut(s)	1367
BspPI	GGATC	2 cut(s)	1345, 1417
BspQI	GCTCTTC	1 cut(s)	870
BspT104I	TTCGAA	2 cut(s)	1604, 1933
BspT107I	GGYRCC	4 cut(s)	683, 1466, 1496, 1809
BsrDI	GCAATG	1 cut(s)	1674
BsrFI	RCCGGY	1 cut(s)	238
BsrI	ACTGG	2 cut(s)	310, 1282
BssAI	RCCGGY	1 cut(s)	238
BssECI	CCNNGG	3 cut(s)	1828, 1920, 1921
BssNI	GRCGYC	3 cut(s)	58, 1142, 1810
Bst2UI	CCWGG	7 cut(s)	321, 593, 841, 933, 1170, 1829, 1922
Bst4CI	ACNGT	3 cut(s)	123, 534, 1730
Bst6I	CTCTTC	4 cut(s)	870, 1788, 1859, 1956
BstACI	GRCGYC	3 cut(s)	58, 1142, 1810
BstAPI	GCANNNNNTGC	1 cut(s)	584
BstBAI	YACGTR	1 cut(s)	273
BstBI	TTCGAA	2 cut(s)	1604, 1933
BstC8I	GCNNGC	4 cut(s)	314, 589, 1365, 1665
BstDEI	CTNAG	4 cut(s)	654, 1116, 1203, 1541
BstFNI	CGCG	1 cut(s)	1407
BstH2I	RGCGCY	1 cut(s)	1813
BstHHI	GCGC	2 cut(s)	238, 1812
BstMAI	GTCTC	1 cut(s)	1447
BstMWI	GCNNNNNNNGC	8 cut(s)	227, 357, 584, 593, 1421, 1660, 1669, 1992
BstNI	CCWGG	7 cut(s)	321, 593, 841, 933, 1170, 1829, 1922
BstNSI	RCATGY	2 cut(s)	364, 976
BstSCI	CCNGG	8 cut(s)	148, 319, 591, 839, 931, 1168, 1827, 1920
BstSFI	CTRYAG	3 cut(s)	26, 576, 1483
BstSLI	GKGCMC	1 cut(s)	688
BstSNI	TACGTA	1 cut(s)	273
BstUI	CGCG	1 cut(s)	1407
BstV1I	GCAGC	8 cut(s)	109, 220, 242, 296, 494, 590, 1469, 1720
BstX2I	RGATCY	3 cut(s)	778, 1337, 1409
BstXI	CCANNNNNNTGG	1 cut(s)	320
BstYI	RGATCY	3 cut(s)	778, 1337, 1409
BsuRI	GGCC	6 cut(s)	221, 724, 844, 1954, 1995, 2012
BtgZI	GCGATG	1 cut(s)	1388
BtsI	GCAGTG	1 cut(s)	1492
BtsIMutI	CAGTG	4 cut(s)	829, 1492, 1549, 1983
Cac8I	GCNNGC	4 cut(s)	314, 589, 1365, 1665
CciI	TCATGA	1 cut(s)	343
CfoI	GCGC	2 cut(s)	238, 1812
Cfr10I	RCCGGY	1 cut(s)	238
Cfr13I	GGNCC	4 cut(s)	722, 1243, 1270, 1994
CseI	GACGC	1 cut(s)	66
CsiI	ACCWGGT	2 cut(s)	319, 931
Csp6I	GTAC	5 cut(s)	298, 446, 1497, 1531, 1909
CviQI	GTAC	5 cut(s)	298, 446, 1497, 1531, 1909
DdeI	CTNAG	4 cut(s)	654, 1116, 1203, 1541
DinI	GGCGCC	1 cut(s)	1811
DraIII	CACNNNGTG	2 cut(s)	433, 851
EaeI	YGGCCR	2 cut(s)	219, 842
Eam1104I	CTCTTC	4 cut(s)	870, 1788, 1859, 1956
EarI	CTCTTC	4 cut(s)	870, 1788, 1859, 1956
Ecl136II	GAGCTC	1 cut(s)	556
Eco105I	TACGTA	1 cut(s)	273
Eco147I	AGGCCT	1 cut(s)	1954
Eco24I	GRGCYC	1 cut(s)	558
Eco47I	GGWCC	2 cut(s)	1243, 1270
Eco53kI	GAGCTC	1 cut(s)	556
Eco57I	CTGAAG	3 cut(s)	849, 1028, 1812
EcoICRI	GAGCTC	1 cut(s)	556
EcoO109I	RGGNCCY	3 cut(s)	722, 1243, 1270
EcoRI	GAATTC	1 cut(s)	1573
EcoRII	CCWGG	7 cut(s)	319, 591, 839, 931, 1168, 1827, 1920
EcoT38I	GRGCYC	1 cut(s)	558
EgeI	GGCGCC	1 cut(s)	1811
EheI	GGCGCC	1 cut(s)	1811
Esp3I	CGTCTC	1 cut(s)	1447
FalI	AAGNNNNNCTT	4 cut(s)	765, 797, 847, 879
FauI	CCCGC	1 cut(s)	842
FauNDI	CATATG	1 cut(s)	634
FbaI	TGATCA	2 cut(s)	757, 1611
FblI	GTMKAC	1 cut(s)	1889
Fnu4HI	GCNGC	8 cut(s)	98, 231, 234, 310, 483, 579, 1483, 1734
FriOI	GRGCYC	1 cut(s)	558
Fsp4HI	GCNGC	8 cut(s)	98, 231, 234, 310, 483, 579, 1483, 1734
FspBI	CTAG	4 cut(s)	732, 1020, 1091, 1364
GlaI	GCGC	2 cut(s)	237, 1811
GluI	GCNGC	8 cut(s)	98, 231, 234, 310, 483, 579, 1483, 1734
GsaI	CCCAGC	1 cut(s)	1950
GsuI	CTGGAG	4 cut(s)	513, 1679, 1694, 1904
HaeII	RGCGCY	1 cut(s)	1813
HaeIII	GGCC	6 cut(s)	221, 724, 844, 1954, 1995, 2012
HapII	CCGG	3 cut(s)	150, 239, 1146
HgaI	GACGC	1 cut(s)	66
HhaI	GCGC	2 cut(s)	238, 1812
Hin1I	GRCGYC	3 cut(s)	58, 1142, 1810
Hin6I	GCGC	2 cut(s)	236, 1810
HinP1I	GCGC	2 cut(s)	236, 1810
HincII	GTYRAC	2 cut(s)	88, 970
HindII	GTYRAC	2 cut(s)	88, 970
HindIII	AAGCTT	3 cut(s)	856, 920, 1652
HpaII	CCGG	3 cut(s)	150, 239, 1146
HphI	GGTGA	3 cut(s)	253, 1562, 1654
Hpy166II	GTNNAC	4 cut(s)	88, 970, 1533, 1890
Hpy188I	TCNGA	7 cut(s)	477, 762, 1008, 1389, 1452, 1585, 1792
Hpy8I	GTNNAC	4 cut(s)	88, 970, 1533, 1890
HpyAV	CCTTC	7 cut(s)	117, 128, 767, 1003, 1613, 1921, 2002
HpyCH4III	ACNGT	3 cut(s)	123, 534, 1730
HpyCH4IV	ACGT	3 cut(s)	272, 1024, 1142
HpyF10VI	GCNNNNNNNGC	8 cut(s)	227, 357, 584, 593, 1421, 1660, 1669, 1992
HpyF3I	CTNAG	4 cut(s)	654, 1116, 1203, 1541
HpySE526I	ACGT	3 cut(s)	272, 1024, 1142
Hsp92I	GRCGYC	3 cut(s)	58, 1142, 1810
HspAI	GCGC	2 cut(s)	236, 1810
KasI	GGCGCC	1 cut(s)	1809
KpnI	GGTACC	1 cut(s)	1500
Ksp22I	TGATCA	2 cut(s)	757, 1611
LguI	GCTCTTC	1 cut(s)	870
LmnI	GCTCC	2 cut(s)	207, 1660
Lsp1109I	GCAGC	8 cut(s)	109, 220, 242, 296, 494, 590, 1469, 1720
LweI	GCATC	4 cut(s)	274, 457, 1227, 1933
MabI	ACCWGGT	2 cut(s)	319, 931
MaeI	CTAG	4 cut(s)	732, 1020, 1091, 1364
MaeII	ACGT	3 cut(s)	272, 1024, 1142
MaeIII	GTNAC	5 cut(s)	528, 612, 1082, 1642, 1747
MboII	GAAGA	9 cut(s)	192, 256, 855, 887, 1547, 1733, 1805, 1876, 1973
MfeI	CAATTG	2 cut(s)	582, 1161
MflI	RGATCY	3 cut(s)	778, 1337, 1409
MhlI	GDGCHC	3 cut(s)	204, 558, 688
MlsI	TGGCCA	2 cut(s)	221, 844
MluCI	AATT	8 cut(s)	33, 461, 582, 806, 1161, 1284, 1573, 1626
MluNI	TGGCCA	2 cut(s)	221, 844
Mly113I	GGCGCC	1 cut(s)	1810
MlyI	GAGTC	5 cut(s)	581, 981, 1010, 1895, 1982
MmeI	TCCRAC	1 cut(s)	174
Mox20I	TGGCCA	2 cut(s)	221, 844
MroXI	GAANNNNTTC	1 cut(s)	859
MscI	TGGCCA	2 cut(s)	221, 844
MseI	TTAA	5 cut(s)	563, 1299, 1518, 1650, 1872
MslI	CAYNNNNRTG	4 cut(s)	365, 633, 816, 1542
Msp20I	TGGCCA	2 cut(s)	221, 844
MspA1I	CMGCKG	3 cut(s)	233, 1063, 1482
MspI	CCGG	3 cut(s)	150, 239, 1146
MspR9I	CCNGG	8 cut(s)	150, 321, 593, 841, 933, 1170, 1829, 1922
MunI	CAATTG	2 cut(s)	582, 1161
Mva1269I	GAATGC	2 cut(s)	353, 674
MvaI	CCWGG	7 cut(s)	321, 593, 841, 933, 1170, 1829, 1922
MvnI	CGCG	1 cut(s)	1407
MwoI	GCNNNNNNNGC	8 cut(s)	227, 357, 584, 593, 1421, 1660, 1669, 1992
NarI	GGCGCC	1 cut(s)	1810
NciI	CCSGG	1 cut(s)	150
NdeI	CATATG	1 cut(s)	634
NheI	GCTAGC	1 cut(s)	1363
NlaIV	GGNNCC	7 cut(s)	685, 1468, 1498, 1594, 1811, 1826, 1996
NmuCI	GTSAC	3 cut(s)	1082, 1642, 1747
NspI	RCATGY	2 cut(s)	364, 976
NspV	TTCGAA	2 cut(s)	1604, 1933
PagI	TCATGA	1 cut(s)	343
PasI	CCCWGGG	1 cut(s)	1921
PceI	AGGCCT	1 cut(s)	1954
PciSI	GCTCTTC	1 cut(s)	870
PctI	GAATGC	2 cut(s)	353, 674
PdmI	GAANNNNTTC	1 cut(s)	859
PfeI	GAWTC	6 cut(s)	7, 1003, 1173, 1310, 1390, 1447
PflMI	CCANNNNNTGG	3 cut(s)	212, 694, 851
PkrI	GCNGC	8 cut(s)	99, 232, 235, 311, 484, 580, 1484, 1735
PleI	GAGTC	5 cut(s)	580, 981, 1010, 1894, 1981
PluTI	GGCGCC	1 cut(s)	1813
PpsI	GAGTC	5 cut(s)	580, 981, 1010, 1894, 1981
Ppu21I	YACGTR	1 cut(s)	273
PpuMI	RGGWCCY	2 cut(s)	1243, 1270
Psp124BI	GAGCTC	1 cut(s)	558
Psp5II	RGGWCCY	2 cut(s)	1243, 1270
Psp6I	CCWGG	7 cut(s)	319, 591, 839, 931, 1168, 1827, 1920
PspFI	CCCAGC	1 cut(s)	1946
PspGI	CCWGG	7 cut(s)	319, 591, 839, 931, 1168, 1827, 1920
PspN4I	GGNNCC	7 cut(s)	685, 1468, 1498, 1594, 1811, 1826, 1996
PspPI	GGNCC	4 cut(s)	722, 1243, 1270, 1994
PspPPI	RGGWCCY	2 cut(s)	1243, 1270
PstI	CTGCAG	3 cut(s)	30, 580, 1487
PsuI	RGATCY	3 cut(s)	778, 1337, 1409
PvuII	CAGCTG	3 cut(s)	233, 1063, 1482
RsaI	GTAC	5 cut(s)	299, 447, 1498, 1532, 1910
RsaNI	GTAC	5 cut(s)	298, 446, 1497, 1531, 1909
RseI	CAYNNNNRTG	4 cut(s)	365, 633, 816, 1542
SacI	GAGCTC	1 cut(s)	558
SapI	GCTCTTC	1 cut(s)	870
SaqAI	TTAA	5 cut(s)	563, 1299, 1518, 1650, 1872
SatI	GCNGC	8 cut(s)	98, 231, 234, 310, 483, 579, 1483, 1734
Sau96I	GGNCC	4 cut(s)	722, 1243, 1270, 1994
ScaI	AGTACT	1 cut(s)	1910
SchI	GAGTC	5 cut(s)	581, 981, 1010, 1895, 1982
ScrFI	CCNGG	8 cut(s)	150, 321, 593, 841, 933, 1170, 1829, 1922
SduI	GDGCHC	3 cut(s)	204, 558, 688
SexAI	ACCWGGT	2 cut(s)	319, 931
SfaNI	GCATC	4 cut(s)	274, 457, 1227, 1933
SfcI	CTRYAG	3 cut(s)	26, 576, 1483
SfoI	GGCGCC	1 cut(s)	1811
SfuI	TTCGAA	2 cut(s)	1604, 1933
SgrAI	CRCCGGYG	1 cut(s)	238
SinI	GGWCC	2 cut(s)	1243, 1270
SmiMI	CAYNNNNRTG	4 cut(s)	365, 633, 816, 1542
SmlI	CTYRAG	3 cut(s)	557, 870, 989
SmoI	CTYRAG	3 cut(s)	557, 870, 989
SnaBI	TACGTA	1 cut(s)	273
Sse9I	AATT	8 cut(s)	33, 461, 582, 806, 1161, 1284, 1573, 1626
SseBI	AGGCCT	1 cut(s)	1954
SsiI	CCGC	6 cut(s)	4, 332, 351, 835, 1407, 1637
SspDI	GGCGCC	1 cut(s)	1809
SspI	AATATT	1 cut(s)	1198
SspMI	CTAG	4 cut(s)	732, 1020, 1091, 1364
SstI	GAGCTC	1 cut(s)	558
StuI	AGGCCT	1 cut(s)	1954
StyD4I	CCNGG	8 cut(s)	148, 319, 591, 839, 931, 1168, 1827, 1920
TaaI	ACNGT	3 cut(s)	123, 534, 1730
TaiI	ACGT	3 cut(s)	275, 1027, 1145
TaqI	TCGA	4 cut(s)	751, 1604, 1933, 1971
TasI	AATT	8 cut(s)	33, 461, 582, 806, 1161, 1284, 1573, 1626
TatI	WGTACW	1 cut(s)	1908
TfiI	GAWTC	6 cut(s)	7, 1003, 1173, 1310, 1390, 1447
Tru1I	TTAA	5 cut(s)	563, 1299, 1518, 1650, 1872
Tru9I	TTAA	5 cut(s)	563, 1299, 1518, 1650, 1872
TscAI	CASTG	4 cut(s)	829, 1492, 1549, 1983
TseFI	GTSAC	3 cut(s)	1082, 1642, 1747
TseI	GCWGC	8 cut(s)	97, 230, 233, 309, 482, 578, 1482, 1733
Tsp45I	GTSAC	3 cut(s)	1082, 1642, 1747
TspRI	CASTG	4 cut(s)	829, 1492, 1549, 1983
Van91I	CCANNNNNTGG	3 cut(s)	212, 694, 851
VpaK11BI	GGWCC	2 cut(s)	1243, 1270
XapI	RAATTY	3 cut(s)	33, 806, 1573
XbaI	TCTAGA	1 cut(s)	1019
XceI	RCATGY	2 cut(s)	364, 976
XcmI	CCANNNNNNNNNTGG	2 cut(s)	320, 1544
XmiI	GTMKAC	1 cut(s)	1889
XmnI	GAANNNNTTC	1 cut(s)	859
XspI	CTAG	4 cut(s)	732, 1020, 1091, 1364
ZraI	GACGTC	1 cut(s)	1143
ZrmI	AGTACT	1 cut(s)	1910

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.