Zinc finger BED domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g05171 |
| rosa_laevigata | RLG00000013247 |
| rosa_multiflora | Rmu_sc0001195.1_g000009 Rmu_sc0001287.1_g000031 Rmu_sc0005322.1_g000016 Rmu_sc0009709.1_g000012 |
| rosa_roxburghii | Rroxscaffold_2G00142030 |
| rosa_samantha | Rh1DG111400 Rh3DG200100 Rh3DG319500 Rh5AG434100 Rh6BG367900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 219 |
| AccII | CGCG | 1 cut(s) | 214 |
| AciI | CCGC | 1 cut(s) | 212 |
| AcoI | YGGCCR | 1 cut(s) | 315 |
| AgsI | TTSAA | 4 cut(s) | 42, 73, 149, 342 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 141, 173 |
| AluBI | AGCT | 4 cut(s) | 23, 76, 184, 298 |
| AluI | AGCT | 4 cut(s) | 23, 76, 184, 298 |
| AoxI | GGCC | 1 cut(s) | 315 |
| AseI | ATTAAT | 1 cut(s) | 57 |
| AsuHPI | GGTGA | 1 cut(s) | 284 |
| BalI | TGGCCA | 1 cut(s) | 317 |
| BccI | CCATC | 3 cut(s) | 106, 115, 263 |
| BmsI | GCATC | 1 cut(s) | 344 |
| BsaBI | GATNNNNATC | 1 cut(s) | 177 |
| Bse3DI | GCAATG | 1 cut(s) | 235 |
| Bse8I | GATNNNNATC | 1 cut(s) | 177 |
| BseGI | GGATG | 1 cut(s) | 126 |
| BseJI | GATNNNNATC | 1 cut(s) | 177 |
| BseMI | GCAATG | 1 cut(s) | 235 |
| Bsh1236I | CGCG | 1 cut(s) | 214 |
| BshFI | GGCC | 1 cut(s) | 317 |
| BsnI | GGCC | 1 cut(s) | 317 |
| BspACI | CCGC | 1 cut(s) | 212 |
| BspANI | GGCC | 1 cut(s) | 317 |
| BspFNI | CGCG | 1 cut(s) | 214 |
| BsrDI | GCAATG | 1 cut(s) | 235 |
| Bst4CI | ACNGT | 1 cut(s) | 66 |
| BstDEI | CTNAG | 1 cut(s) | 199 |
| BstEII | GGTNACC | 1 cut(s) | 364 |
| BstF5I | GGATG | 1 cut(s) | 126 |
| BstFNI | CGCG | 1 cut(s) | 214 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 122 |
| BstPI | GGTNACC | 1 cut(s) | 364 |
| BstUI | CGCG | 1 cut(s) | 214 |
| BsuRI | GGCC | 1 cut(s) | 317 |
| BtsCI | GGATG | 1 cut(s) | 126 |
| BtsI | GCAGTG | 1 cut(s) | 132 |
| BtsIMutI | CAGTG | 2 cut(s) | 132, 372 |
| CviAII | CATG | 2 cut(s) | 29, 319 |
| CviJI | RGCY | 8 cut(s) | 7, 23, 76, 86, 116, 184, 298, 317 |
| CviKI_1 | RGCY | 8 cut(s) | 7, 23, 76, 86, 116, 184, 298, 317 |
| DdeI | CTNAG | 1 cut(s) | 199 |
| EaeI | YGGCCR | 1 cut(s) | 315 |
| Eco32I | GATATC | 1 cut(s) | 328 |
| Eco91I | GGTNACC | 1 cut(s) | 364 |
| EcoO65I | GGTNACC | 1 cut(s) | 364 |
| EcoRV | GATATC | 1 cut(s) | 328 |
| EcoT22I | ATGCAT | 1 cut(s) | 337 |
| FaeI | CATG | 2 cut(s) | 32, 322 |
| FaiI | YATR | 5 cut(s) | 30, 219, 311, 320, 333 |
| FatI | CATG | 2 cut(s) | 28, 318 |
| FokI | GGATG | 1 cut(s) | 133 |
| HaeIII | GGCC | 1 cut(s) | 317 |
| Hin1II | CATG | 2 cut(s) | 32, 322 |
| HphI | GGTGA | 1 cut(s) | 284 |
| Hpy188I | TCNGA | 2 cut(s) | 80, 120 |
| Hpy99I | CGWCG | 1 cut(s) | 170 |
| HpyAV | CCTTC | 1 cut(s) | 355 |
| HpyCH4III | ACNGT | 1 cut(s) | 66 |
| HpyCH4IV | ACGT | 1 cut(s) | 165 |
| HpyCH4V | TGCA | 2 cut(s) | 246, 335 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 122 |
| HpyF3I | CTNAG | 1 cut(s) | 199 |
| HpySE526I | ACGT | 1 cut(s) | 165 |
| Hsp92II | CATG | 2 cut(s) | 32, 322 |
| LpnPI | CCDG | 1 cut(s) | 232 |
| LweI | GCATC | 1 cut(s) | 344 |
| MaeII | ACGT | 1 cut(s) | 165 |
| MaeIII | GTNAC | 1 cut(s) | 364 |
| MboII | GAAGA | 3 cut(s) | 142, 278, 330 |
| MlsI | TGGCCA | 1 cut(s) | 317 |
| MluCI | AATT | 1 cut(s) | 104 |
| MluNI | TGGCCA | 1 cut(s) | 317 |
| MnlI | CCTC | 2 cut(s) | 268, 355 |
| Mox20I | TGGCCA | 1 cut(s) | 317 |
| Mph1103I | ATGCAT | 1 cut(s) | 337 |
| MscI | TGGCCA | 1 cut(s) | 317 |
| MseI | TTAA | 2 cut(s) | 57, 279 |
| Msp20I | TGGCCA | 1 cut(s) | 317 |
| MvnI | CGCG | 1 cut(s) | 214 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 122 |
| NlaIII | CATG | 2 cut(s) | 32, 322 |
| NsiI | ATGCAT | 1 cut(s) | 337 |
| PshBI | ATTAAT | 1 cut(s) | 57 |
| PsiI | TTATAA | 1 cut(s) | 219 |
| PspEI | GGTNACC | 1 cut(s) | 364 |
| SaqAI | TTAA | 2 cut(s) | 57, 279 |
| SetI | ASST | 9 cut(s) | 25, 78, 146, 168, 186, 279, 300, 347, 366 |
| SfaNI | GCATC | 1 cut(s) | 344 |
| SgeI | CNNG | 7 cut(s) | 41, 89, 129, 218, 225, 259, 331 |
| Sse9I | AATT | 1 cut(s) | 104 |
| SsiI | CCGC | 1 cut(s) | 212 |
| SspI | AATATT | 1 cut(s) | 155 |
| TaaI | ACNGT | 1 cut(s) | 66 |
| TaiI | ACGT | 1 cut(s) | 168 |
| TaqI | TCGA | 1 cut(s) | 168 |
| TasI | AATT | 1 cut(s) | 104 |
| Tru1I | TTAA | 2 cut(s) | 57, 279 |
| Tru9I | TTAA | 2 cut(s) | 57, 279 |
| TscAI | CASTG | 2 cut(s) | 132, 379 |
| TspDTI | ATGAA | 3 cut(s) | 17, 111, 149 |
| TspRI | CASTG | 2 cut(s) | 132, 379 |
| VspI | ATTAAT | 1 cut(s) | 57 |
| Zsp2I | ATGCAT | 1 cut(s) | 337 |