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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g05171 |
| rosa_laevigata | RLG00000013247 |
| rosa_multiflora | Rmu_sc0001195.1_g000009 Rmu_sc0001287.1_g000031 Rmu_sc0005322.1_g000016 Rmu_sc0009709.1_g000012 |
| rosa_roxburghii | Rroxscaffold_2G00142030 |
| rosa_samantha | Rh1DG111400 Rh3DG200100 Rh3DG319500 Rh5AG434100 Rh6BG367900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 167 |
| AcoI | YGGCCR | 1 cut(s) | 54 |
| AfaI | GTAC | 1 cut(s) | 193 |
| AgsI | TTSAA | 2 cut(s) | 81, 201 |
| AlwI | GGATC | 1 cut(s) | 167 |
| AoxI | GGCC | 1 cut(s) | 54 |
| AsuHPI | GGTGA | 1 cut(s) | 23 |
| BalI | TGGCCA | 1 cut(s) | 56 |
| BccI | CCATC | 1 cut(s) | 2 |
| BfaI | CTAG | 2 cut(s) | 129, 189 |
| BmcAI | AGTACT | 1 cut(s) | 193 |
| BmsI | GCATC | 1 cut(s) | 83 |
| BseGI | GGATG | 1 cut(s) | 255 |
| BshFI | GGCC | 1 cut(s) | 56 |
| BsiSI | CCGG | 1 cut(s) | 176 |
| BsnI | GGCC | 1 cut(s) | 56 |
| Bsp143I | GATC | 1 cut(s) | 172 |
| BspANI | GGCC | 1 cut(s) | 56 |
| BspPI | GGATC | 1 cut(s) | 167 |
| BssMI | GATC | 1 cut(s) | 172 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 185 |
| BstEII | GGTNACC | 1 cut(s) | 103 |
| BstF5I | GGATG | 1 cut(s) | 255 |
| BstKTI | GATC | 1 cut(s) | 175 |
| BstMBI | GATC | 1 cut(s) | 172 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 176, 185 |
| BstPI | GGTNACC | 1 cut(s) | 103 |
| BstX2I | RGATCY | 1 cut(s) | 172 |
| BstYI | RGATCY | 1 cut(s) | 172 |
| BsuRI | GGCC | 1 cut(s) | 56 |
| BtsCI | GGATG | 1 cut(s) | 255 |
| Csp6I | GTAC | 1 cut(s) | 192 |
| CviAII | CATG | 1 cut(s) | 58 |
| CviJI | RGCY | 2 cut(s) | 56, 246 |
| CviKI_1 | RGCY | 2 cut(s) | 56, 246 |
| CviQI | GTAC | 1 cut(s) | 192 |
| DpnI | GATC | 1 cut(s) | 174 |
| DpnII | GATC | 1 cut(s) | 172 |
| EaeI | YGGCCR | 1 cut(s) | 54 |
| Eco32I | GATATC | 1 cut(s) | 67 |
| Eco91I | GGTNACC | 1 cut(s) | 103 |
| EcoO65I | GGTNACC | 1 cut(s) | 103 |
| EcoRV | GATATC | 1 cut(s) | 67 |
| EcoT22I | ATGCAT | 1 cut(s) | 76 |
| FaeI | CATG | 1 cut(s) | 61 |
| FaiI | YATR | 2 cut(s) | 59, 72 |
| FatI | CATG | 1 cut(s) | 57 |
| FspBI | CTAG | 2 cut(s) | 129, 189 |
| HaeIII | GGCC | 1 cut(s) | 56 |
| HapII | CCGG | 1 cut(s) | 176 |
| Hin1II | CATG | 1 cut(s) | 61 |
| HpaII | CCGG | 1 cut(s) | 176 |
| HphI | GGTGA | 1 cut(s) | 23 |
| Hpy166II | GTNNAC | 1 cut(s) | 139 |
| Hpy8I | GTNNAC | 1 cut(s) | 139 |
| HpyAV | CCTTC | 1 cut(s) | 94 |
| HpyCH4IV | ACGT | 1 cut(s) | 241 |
| HpyCH4V | TGCA | 2 cut(s) | 74, 218 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 176, 185 |
| HpySE526I | ACGT | 1 cut(s) | 241 |
| Hsp92II | CATG | 1 cut(s) | 61 |
| Kzo9I | GATC | 1 cut(s) | 172 |
| LpnPI | CCDG | 2 cut(s) | 189, 232 |
| LweI | GCATC | 1 cut(s) | 83 |
| MaeI | CTAG | 2 cut(s) | 129, 189 |
| MaeII | ACGT | 1 cut(s) | 241 |
| MaeIII | GTNAC | 1 cut(s) | 103 |
| MalI | GATC | 1 cut(s) | 174 |
| MboI | GATC | 1 cut(s) | 172 |
| MboII | GAAGA | 2 cut(s) | 17, 69 |
| MflI | RGATCY | 1 cut(s) | 172 |
| MlsI | TGGCCA | 1 cut(s) | 56 |
| MluNI | TGGCCA | 1 cut(s) | 56 |
| MnlI | CCTC | 4 cut(s) | 7, 94, 100, 216 |
| Mox20I | TGGCCA | 1 cut(s) | 56 |
| Mph1103I | ATGCAT | 1 cut(s) | 76 |
| MscI | TGGCCA | 1 cut(s) | 56 |
| MseI | TTAA | 1 cut(s) | 18 |
| Msp20I | TGGCCA | 1 cut(s) | 56 |
| MspI | CCGG | 1 cut(s) | 176 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 176, 185 |
| NdeII | GATC | 1 cut(s) | 172 |
| NlaIII | CATG | 1 cut(s) | 61 |
| NsiI | ATGCAT | 1 cut(s) | 76 |
| PspEI | GGTNACC | 1 cut(s) | 103 |
| PsuI | RGATCY | 1 cut(s) | 172 |
| RsaI | GTAC | 1 cut(s) | 193 |
| RsaNI | GTAC | 1 cut(s) | 192 |
| SaqAI | TTAA | 1 cut(s) | 18 |
| Sau3AI | GATC | 1 cut(s) | 172 |
| ScaI | AGTACT | 1 cut(s) | 193 |
| SetI | ASST | 6 cut(s) | 18, 39, 86, 92, 105, 244 |
| SfaNI | GCATC | 1 cut(s) | 83 |
| SgeI | CNNG | 4 cut(s) | 70, 141, 188, 201 |
| SspMI | CTAG | 2 cut(s) | 129, 189 |
| TaiI | ACGT | 1 cut(s) | 244 |
| TaqI | TCGA | 1 cut(s) | 236 |
| TatI | WGTACW | 1 cut(s) | 191 |
| Tru1I | TTAA | 1 cut(s) | 18 |
| Tru9I | TTAA | 1 cut(s) | 18 |
| XspI | CTAG | 2 cut(s) | 129, 189 |
| ZrmI | AGTACT | 1 cut(s) | 193 |
| Zsp2I | ATGCAT | 1 cut(s) | 76 |