No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g05171 |
| rosa_laevigata | RLG00000013247 |
| rosa_multiflora | Rmu_sc0001195.1_g000009 Rmu_sc0001287.1_g000031 Rmu_sc0005322.1_g000016 Rmu_sc0009709.1_g000012 |
| rosa_roxburghii | Rroxscaffold_2G00142030 |
| rosa_samantha | Rh1DG111400 Rh3DG200100 Rh3DG319500 Rh5AG434100 Rh6BG367900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 172 |
| AccI | GTMKAC | 1 cut(s) | 218 |
| AclWI | GGATC | 1 cut(s) | 139 |
| AfaI | GTAC | 1 cut(s) | 187 |
| AluBI | AGCT | 1 cut(s) | 77 |
| AluI | AGCT | 1 cut(s) | 77 |
| AlwI | GGATC | 1 cut(s) | 139 |
| ApeKI | GCWGC | 3 cut(s) | 74, 77, 191 |
| AseI | ATTAAT | 1 cut(s) | 84 |
| AsuHPI | GGTGA | 1 cut(s) | 115 |
| BanI | GGYRCC | 1 cut(s) | 172 |
| BbvI | GCAGC | 3 cut(s) | 64, 86, 178 |
| BccI | CCATC | 1 cut(s) | 184 |
| BfaI | CTAG | 1 cut(s) | 50 |
| BisI | GCNGC | 3 cut(s) | 75, 78, 192 |
| BlsI | GCNGC | 3 cut(s) | 76, 79, 193 |
| BmcAI | AGTACT | 1 cut(s) | 187 |
| BmiI | GGNNCC | 1 cut(s) | 174 |
| BseMII | CTCAG | 1 cut(s) | 182 |
| BseXI | GCAGC | 3 cut(s) | 64, 86, 178 |
| BshNI | GGYRCC | 1 cut(s) | 172 |
| BsmI | GAATGC | 1 cut(s) | 139 |
| Bsp143I | GATC | 1 cut(s) | 131 |
| BspCNI | CTCAG | 1 cut(s) | 181 |
| BspLI | GGNNCC | 1 cut(s) | 174 |
| BspPI | GGATC | 1 cut(s) | 139 |
| BspT107I | GGYRCC | 1 cut(s) | 172 |
| BssMI | GATC | 1 cut(s) | 131 |
| BstDEI | CTNAG | 1 cut(s) | 168 |
| BstEII | GGTNACC | 1 cut(s) | 121 |
| BstKTI | GATC | 1 cut(s) | 134 |
| BstMBI | GATC | 1 cut(s) | 131 |
| BstPI | GGTNACC | 1 cut(s) | 121 |
| BstV1I | GCAGC | 3 cut(s) | 64, 86, 178 |
| Csp6I | GTAC | 1 cut(s) | 186 |
| CviJI | RGCY | 4 cut(s) | 56, 77, 101, 199 |
| CviKI_1 | RGCY | 4 cut(s) | 56, 77, 101, 199 |
| CviQI | GTAC | 1 cut(s) | 186 |
| DdeI | CTNAG | 1 cut(s) | 168 |
| DpnI | GATC | 1 cut(s) | 133 |
| DpnII | GATC | 1 cut(s) | 131 |
| Eco91I | GGTNACC | 1 cut(s) | 121 |
| EcoO65I | GGTNACC | 1 cut(s) | 121 |
| EcoT22I | ATGCAT | 1 cut(s) | 141 |
| FaiI | YATR | 2 cut(s) | 70, 72 |
| FauNDI | CATATG | 1 cut(s) | 70 |
| FblI | GTMKAC | 1 cut(s) | 218 |
| Fnu4HI | GCNGC | 3 cut(s) | 75, 78, 192 |
| Fsp4HI | GCNGC | 3 cut(s) | 75, 78, 192 |
| FspBI | CTAG | 1 cut(s) | 50 |
| GluI | GCNGC | 3 cut(s) | 75, 78, 192 |
| HinfI | GANTC | 1 cut(s) | 14 |
| HphI | GGTGA | 1 cut(s) | 115 |
| Hpy166II | GTNNAC | 1 cut(s) | 219 |
| Hpy188I | TCNGA | 1 cut(s) | 145 |
| Hpy188III | TCNNGA | 1 cut(s) | 152 |
| Hpy8I | GTNNAC | 1 cut(s) | 219 |
| HpyAV | CCTTC | 2 cut(s) | 19, 112 |
| HpyCH4V | TGCA | 4 cut(s) | 74, 80, 139, 212 |
| HpyF3I | CTNAG | 1 cut(s) | 168 |
| Kzo9I | GATC | 1 cut(s) | 131 |
| LpnPI | CCDG | 1 cut(s) | 155 |
| Lsp1109I | GCAGC | 3 cut(s) | 64, 86, 178 |
| MaeI | CTAG | 1 cut(s) | 50 |
| MaeIII | GTNAC | 1 cut(s) | 121 |
| MalI | GATC | 1 cut(s) | 133 |
| MboI | GATC | 1 cut(s) | 131 |
| MluCI | AATT | 3 cut(s) | 81, 85, 94 |
| MnlI | CCTC | 3 cut(s) | 112, 172, 210 |
| Mph1103I | ATGCAT | 1 cut(s) | 141 |
| MseI | TTAA | 1 cut(s) | 84 |
| MspA1I | CMGCKG | 1 cut(s) | 77 |
| Mva1269I | GAATGC | 1 cut(s) | 139 |
| NdeI | CATATG | 1 cut(s) | 70 |
| NdeII | GATC | 1 cut(s) | 131 |
| NlaIV | GGNNCC | 1 cut(s) | 174 |
| NmuCI | GTSAC | 1 cut(s) | 121 |
| NsiI | ATGCAT | 1 cut(s) | 141 |
| PctI | GAATGC | 1 cut(s) | 139 |
| PfeI | GAWTC | 1 cut(s) | 14 |
| PkrI | GCNGC | 3 cut(s) | 76, 79, 193 |
| PshBI | ATTAAT | 1 cut(s) | 84 |
| PspEI | GGTNACC | 1 cut(s) | 121 |
| PspN4I | GGNNCC | 1 cut(s) | 174 |
| PvuII | CAGCTG | 1 cut(s) | 77 |
| RsaI | GTAC | 1 cut(s) | 187 |
| RsaNI | GTAC | 1 cut(s) | 186 |
| SaqAI | TTAA | 1 cut(s) | 84 |
| SatI | GCNGC | 3 cut(s) | 75, 78, 192 |
| Sau3AI | GATC | 1 cut(s) | 131 |
| ScaI | AGTACT | 1 cut(s) | 187 |
| SetI | ASST | 5 cut(s) | 39, 79, 123, 164, 232 |
| SgeI | CNNG | 5 cut(s) | 62, 70, 164, 182, 195 |
| Sse9I | AATT | 3 cut(s) | 81, 85, 94 |
| SspMI | CTAG | 1 cut(s) | 50 |
| TasI | AATT | 3 cut(s) | 81, 85, 94 |
| TatI | WGTACW | 1 cut(s) | 185 |
| TfiI | GAWTC | 1 cut(s) | 14 |
| Tru1I | TTAA | 1 cut(s) | 84 |
| Tru9I | TTAA | 1 cut(s) | 84 |
| TseFI | GTSAC | 1 cut(s) | 121 |
| TseI | GCWGC | 3 cut(s) | 74, 77, 191 |
| Tsp45I | GTSAC | 1 cut(s) | 121 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| VspI | ATTAAT | 1 cut(s) | 84 |
| XmiI | GTMKAC | 1 cut(s) | 218 |
| XspI | CTAG | 1 cut(s) | 50 |
| ZrmI | AGTACT | 1 cut(s) | 187 |
| Zsp2I | ATGCAT | 1 cut(s) | 141 |