Rmu_sc0015167.1_g000005

UDP-arabinopyranose mutase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0015167.1
Physical Location & Seq
Forward (+)
14641 .. 16854
2214 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0015167.1_g000005.1.cds

Sequence Viewer

Length: 1164 bp
atgtctaacgcaaccatagacgatagtgaggttgacattgtgattgcagcaatcaacccggacctgaaatcattcttgaatgaatggagaccaattatctcccagtttcatctgattattgtcaaagaccctgatatgaaacaggaactccaaattccagaaggatttaatgcagatgtctttaccaaagctgacataacccgcaaggtggggtcttccacctccattgtcttctcaggttactcgtgcaggtacttcggttatctagtatcacggaaaaaatatatcatctcaattgatgatgactgcaccccggctagggacagcaatggtgatttagtagatgttgttgctcagcatattgccaaccttaaaactccagcaacccctttcttttttaacacactctatgatcctttccgtaagggagcagattttgttcgcggttacccattcagcctgcggagtggggttacatgcgggctatcctgtggactgtggctcaatttggctgaccttgatgcaccaactcaggccctcaagccagagcagaggaattctcgatacgtggatgctgtaatgactgtcccagtgagagccttgctgcctgtaagtggagtcaacattgcttttgatcgtgaggtggttgggccagctttgttcccggctttgaggttggcaggtgaaggaaagtttaggtgggagacgatggaagatatatggtgcggaatgtgtgtaaaggttgtatgtgatcacctggggcttggtgtcaaaactgggatgccttatgtatggagaaaagaccgaggtgatgccgttcaaagcttgaagagttctttaacaacttgcctttgtcctcaaccccagccgctgcaccaccagtcctcgccggaggaacccagtctcggacctgttcacacgaatcaacacgtcgccacctgccccaccagtcttggggcggtgattgctccgctccaatcgtcactccaacgcaccgggaaaatggataggcaaacctcgtgccaacaactcctggtcaccacggtgacccaacccgagaggggagcgcagcctcgtcgccccactgaagagaagcaccaccatcagacaggatctgagaaaaggaagtcgacgccggcaaaaaagctagccctggtctgttag

Protein Analysis

387

Amino Acids

42.77

Weight (kDa)

8.21

Isoelectric Point (pI)

47.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 671, 947
Acc36I ACCTGC 3 cut(s) 240, 671, 947
AccBSI CCGCTC 1 cut(s) 973
AccI GTMKAC 1 cut(s) 1130
AccII CGCG 1 cut(s) 444
AciI CCGC 8 cut(s) 202, 444, 463, 480, 726, 869, 959, 971
AclWI GGATC 2 cut(s) 407, 1120
AcsI RAATTY 2 cut(s) 153, 556
AcuI CTGAAG 1 cut(s) 1107
AcyI GRCGYC 1 cut(s) 1133
AfaI GTAC 1 cut(s) 254
AfiI CCNNNNNNNGG 7 cut(s) 208, 318, 319, 614, 905, 954, 1061
AflIII ACRYGT 1 cut(s) 928
AgsI TTSAA 3 cut(s) 79, 821, 829
AjiI CACGTC 1 cut(s) 931
AjnI CCWGG 3 cut(s) 756, 1032, 1152
AleI CACNNNNGTG 1 cut(s) 1043
AluBI AGCT 4 cut(s) 191, 656, 825, 1147
AluI AGCT 4 cut(s) 191, 656, 825, 1147
Alw26I GTCTC 3 cut(s) 82, 698, 908
AlwI GGATC 2 cut(s) 407, 1120
AlwNI CAGNNNCTG 2 cut(s) 871, 1115
Ama87I CYCGRG 1 cut(s) 1055
AoxI GGCC 2 cut(s) 534, 650
ApeKI GCWGC 4 cut(s) 47, 604, 871, 1069
ApoI RAATTY 2 cut(s) 153, 556
Asp700I GAANNNNTTC 1 cut(s) 71
AspLEI GCGC 1 cut(s) 1069
AspS9I GGNCC 4 cut(s) 61, 535, 650, 908
AsuC2I CCSGG 4 cut(s) 59, 314, 665, 997
AsuHPI GGTGA 7 cut(s) 344, 695, 746, 821, 973, 1030, 1057
AsuNHI GCTAGC 1 cut(s) 1147
AvaI CYCGRG 1 cut(s) 1055
AvaII GGWCC 2 cut(s) 61, 908
BaeI ACNNNNGTAYC 2 cut(s) 244, 277
BauI CACGAG 2 cut(s) 244, 1018
BbsI GAAGAC 2 cut(s) 207, 223
BbvI GCAGC 4 cut(s) 59, 591, 858, 1081
BccI CCATC 2 cut(s) 703, 1110
BceAI ACGGC 1 cut(s) 800
BcgI CGANNNNNNTGC 4 cut(s) 238, 272, 1058, 1092
BciT130I CCWGG 3 cut(s) 758, 1034, 1154
BclI TGATCA 1 cut(s) 751
BcnI CCSGG 4 cut(s) 59, 314, 665, 997
BcoDI GTCTC 3 cut(s) 82, 698, 908
BfaI CTAG 3 cut(s) 266, 318, 1148
BfuAI ACCTGC 3 cut(s) 240, 671, 947
BisI GCNGC 5 cut(s) 48, 605, 869, 872, 1070
BlpI GCTNAGC 1 cut(s) 354
BlsI GCNGC 5 cut(s) 49, 606, 870, 873, 1071
Bme1390I CCNGG 7 cut(s) 59, 314, 665, 758, 997, 1034, 1154
Bme18I GGWCC 2 cut(s) 61, 908
BmeT110I CYCGRG 1 cut(s) 1055
BmgBI CACGTC 1 cut(s) 931
BmgT120I GGNCC 4 cut(s) 61, 535, 650, 908
BmiI GGNNCC 1 cut(s) 897
BmrFI CCNGG 7 cut(s) 59, 314, 665, 758, 997, 1034, 1154
BmrI ACTGGG 4 cut(s) 97, 584, 786, 894
BmsI GCATC 4 cut(s) 511, 562, 771, 802
BmtI GCTAGC 1 cut(s) 1151
BmuI ACTGGG 4 cut(s) 97, 584, 786, 894
BpiI GAAGAC 2 cut(s) 207, 223
BplI GAGNNNNNCTC 2 cut(s) 544, 576
BpmI CTGGAG 1 cut(s) 363
Bpu1102I GCTNAGC 1 cut(s) 354
BpuEI CTTGAG 1 cut(s) 524
BpuMI CCSGG 4 cut(s) 59, 314, 665, 997
BsaAI YACGTR 1 cut(s) 568
BsaHI GRCGYC 1 cut(s) 1133
BsaI GGTCTC 1 cut(s) 82
BsaJI CCNNGG 5 cut(s) 312, 757, 805, 1041, 1152
BsaXI ACNNNNNCTCC 2 cut(s) 132, 162
Bsc4I CCNNNNNNNGG 7 cut(s) 208, 318, 319, 614, 905, 954, 1061
Bse118I RCCGGY 1 cut(s) 1135
Bse1I ACTGG 6 cut(s) 103, 590, 781, 880, 900, 948
Bse3DI GCAATG 2 cut(s) 334, 624
BseBI CCWGG 3 cut(s) 758, 1034, 1154
BseDI CCNNGG 5 cut(s) 312, 757, 805, 1041, 1152
BseGI GGATG 2 cut(s) 577, 786
BseLI CCNNNNNNNGG 7 cut(s) 208, 318, 319, 614, 905, 954, 1061
BseMI GCAATG 2 cut(s) 334, 624
BseMII CTCAG 4 cut(s) 249, 368, 545, 1107
BseNI ACTGG 6 cut(s) 103, 590, 781, 880, 900, 948
BseXI GCAGC 4 cut(s) 59, 591, 858, 1081
BseYI CCCAGC 1 cut(s) 864
BsgI GTGCAG 3 cut(s) 268, 292, 857
Bsh1236I CGCG 1 cut(s) 444
BshFI GGCC 2 cut(s) 536, 652
BsiHKCI CYCGRG 1 cut(s) 1055
BsiSI CCGG 6 cut(s) 59, 314, 665, 890, 996, 1136
BslFI GGGAC 2 cut(s) 335, 572
BslI CCNNNNNNNGG 7 cut(s) 208, 318, 319, 614, 905, 954, 1061
BsmAI GTCTC 3 cut(s) 82, 698, 908
BsmBI CGTCTC 1 cut(s) 698
BsmFI GGGAC 2 cut(s) 335, 572
BsnI GGCC 2 cut(s) 536, 652
Bso31I GGTCTC 1 cut(s) 82
BsoBI CYCGRG 1 cut(s) 1055
Bsp143I GATC 4 cut(s) 412, 634, 751, 1112
Bsp1720I GCTNAGC 1 cut(s) 354
BspACI CCGC 8 cut(s) 202, 444, 463, 480, 726, 869, 959, 971
BspANI GGCC 2 cut(s) 536, 652
BspCNI CTCAG 4 cut(s) 248, 367, 544, 1108
BspFNI CGCG 1 cut(s) 444
BspLI GGNNCC 1 cut(s) 897
BspMI ACCTGC 3 cut(s) 240, 671, 947
BspOI GCTAGC 1 cut(s) 1151
BspPI GGATC 2 cut(s) 407, 1120
BspTNI GGTCTC 1 cut(s) 82
BsrBI CCGCTC 1 cut(s) 973
BsrDI GCAATG 2 cut(s) 334, 624
BsrFI RCCGGY 1 cut(s) 1135
BsrI ACTGG 6 cut(s) 103, 590, 781, 880, 900, 948
BssAI RCCGGY 1 cut(s) 1135
BssECI CCNNGG 5 cut(s) 312, 757, 805, 1041, 1152
BssMI GATC 4 cut(s) 412, 634, 751, 1112
BssNI GRCGYC 1 cut(s) 1133
BssSI CACGAG 2 cut(s) 244, 1018
Bst2BI CACGAG 2 cut(s) 244, 1018
Bst2UI CCWGG 3 cut(s) 758, 1034, 1154
Bst4CI ACNGT 3 cut(s) 498, 586, 1045
Bst6I CTCTTC 2 cut(s) 824, 1083
BstACI GRCGYC 1 cut(s) 1133
BstBAI YACGTR 1 cut(s) 568
BstC8I GCNNGC 5 cut(s) 461, 482, 654, 1137, 1149
BstDEI CTNAG 4 cut(s) 235, 354, 531, 1116
BstDSI CCRYGG 1 cut(s) 1041
BstEII GGTNACC 3 cut(s) 446, 1036, 1045
BstF5I GGATG 2 cut(s) 577, 786
BstFNI CGCG 1 cut(s) 444
BstHHI GCGC 1 cut(s) 1069
BstKTI GATC 4 cut(s) 415, 637, 754, 1115
BstMAI GTCTC 3 cut(s) 82, 698, 908
BstMBI GATC 4 cut(s) 412, 634, 751, 1112
BstMWI GCNNNNNNNGC 1 cut(s) 965
BstNI CCWGG 3 cut(s) 758, 1034, 1154
BstNSI RCATGY 1 cut(s) 480
BstPI GGTNACC 3 cut(s) 446, 1036, 1045
BstSCI CCNGG 7 cut(s) 57, 312, 663, 756, 995, 1032, 1152
BstUI CGCG 1 cut(s) 444
BstV1I GCAGC 4 cut(s) 59, 591, 858, 1081
BstV2I GAAGAC 2 cut(s) 207, 223
BstX2I RGATCY 1 cut(s) 1112
BstYI RGATCY 1 cut(s) 1112
BsuRI GGCC 2 cut(s) 536, 652
BtgI CCRYGG 1 cut(s) 1041
BtrI CACGTC 1 cut(s) 931
BtsCI GGATG 2 cut(s) 577, 786
BtsIMutI CAGTG 2 cut(s) 597, 1083
BveI ACCTGC 3 cut(s) 240, 671, 947
Cac8I GCNNGC 5 cut(s) 461, 482, 654, 1137, 1149
CaiI CAGNNNCTG 2 cut(s) 871, 1115
CfoI GCGC 1 cut(s) 1069
Cfr10I RCCGGY 1 cut(s) 1135
Cfr13I GGNCC 4 cut(s) 61, 535, 650, 908
CseI GACGC 1 cut(s) 1141
Csp6I GTAC 1 cut(s) 253
CspCI CAANNNNNGTGG 4 cut(s) 208, 243, 934, 969
CviAII CATG 1 cut(s) 477
CviQI GTAC 1 cut(s) 253
DdeI CTNAG 4 cut(s) 235, 354, 531, 1116
DpnI GATC 4 cut(s) 414, 636, 753, 1114
DpnII GATC 4 cut(s) 412, 634, 751, 1112
Eam1104I CTCTTC 2 cut(s) 824, 1083
EarI CTCTTC 2 cut(s) 824, 1083
Eco31I GGTCTC 1 cut(s) 82
Eco47I GGWCC 2 cut(s) 61, 908
Eco57I CTGAAG 1 cut(s) 1107
Eco88I CYCGRG 1 cut(s) 1055
Eco91I GGTNACC 3 cut(s) 446, 1036, 1045
EcoO109I RGGNCCY 1 cut(s) 535
EcoO65I GGTNACC 3 cut(s) 446, 1036, 1045
EcoRI GAATTC 1 cut(s) 556
EcoRII CCWGG 3 cut(s) 756, 1032, 1152
Esp3I CGTCTC 1 cut(s) 698
FaeI CATG 1 cut(s) 480
FaqI GGGAC 2 cut(s) 335, 572
FatI CATG 1 cut(s) 476
FauI CCCGC 2 cut(s) 209, 473
FbaI TGATCA 1 cut(s) 751
FblI GTMKAC 1 cut(s) 1130
Fnu4HI GCNGC 5 cut(s) 48, 605, 869, 872, 1070
FokI GGATG 2 cut(s) 584, 793
Fsp4HI GCNGC 5 cut(s) 48, 605, 869, 872, 1070
FspBI CTAG 3 cut(s) 266, 318, 1148
GlaI GCGC 1 cut(s) 1068
GluI GCNGC 5 cut(s) 48, 605, 869, 872, 1070
GsaI CCCAGC 1 cut(s) 868
GsuI CTGGAG 1 cut(s) 363
HaeIII GGCC 2 cut(s) 536, 652
HapII CCGG 6 cut(s) 59, 314, 665, 890, 996, 1136
HgaI GACGC 1 cut(s) 1141
HhaI GCGC 1 cut(s) 1069
Hin1I GRCGYC 1 cut(s) 1133
Hin1II CATG 1 cut(s) 480
Hin6I GCGC 1 cut(s) 1067
HinP1I GCGC 1 cut(s) 1067
HincII GTYRAC 3 cut(s) 34, 622, 1131
HindII GTYRAC 3 cut(s) 34, 622, 1131
HindIII AAGCTT 1 cut(s) 823
HinfI GANTC 2 cut(s) 618, 922
HpaII CCGG 6 cut(s) 59, 314, 665, 890, 996, 1136
HphI GGTGA 7 cut(s) 344, 695, 746, 821, 973, 1030, 1057
Hpy166II GTNNAC 5 cut(s) 34, 494, 622, 916, 1131
Hpy188I TCNGA 4 cut(s) 114, 908, 1107, 1117
Hpy188III TCNNGA 4 cut(s) 76, 158, 561, 638
Hpy8I GTNNAC 5 cut(s) 34, 494, 622, 916, 1131
Hpy99I CGWCG 3 cut(s) 935, 1080, 1135
HpyAV CCTTC 2 cut(s) 155, 680
HpyCH4III ACNGT 3 cut(s) 498, 586, 1045
HpyCH4IV ACGT 2 cut(s) 567, 930
HpyCH4V TGCA 6 cut(s) 47, 173, 249, 309, 524, 874
HpyF10VI GCNNNNNNNGC 1 cut(s) 965
HpyF3I CTNAG 4 cut(s) 235, 354, 531, 1116
HpySE526I ACGT 2 cut(s) 567, 930
Hsp92I GRCGYC 1 cut(s) 1133
Hsp92II CATG 1 cut(s) 480
HspAI GCGC 1 cut(s) 1067
KroI GCCGGC 1 cut(s) 1135
KroNI GCCGGC 1 cut(s) 1137
Ksp22I TGATCA 1 cut(s) 751
Kzo9I GATC 4 cut(s) 412, 634, 751, 1112
LmnI GCTCC 4 cut(s) 428, 973, 978, 1064
Lsp1109I GCAGC 4 cut(s) 59, 591, 858, 1081
LweI GCATC 4 cut(s) 511, 562, 771, 802
MaeI CTAG 3 cut(s) 266, 318, 1148
MaeII ACGT 2 cut(s) 567, 930
MaeIII GTNAC 6 cut(s) 239, 446, 472, 981, 1036, 1045
MalI GATC 4 cut(s) 414, 636, 753, 1114
MbiI CCGCTC 1 cut(s) 973
MboI GATC 4 cut(s) 412, 634, 751, 1112
MboII GAAGA 5 cut(s) 207, 223, 725, 841, 1100
MfeI CAATTG 1 cut(s) 294
MflI RGATCY 1 cut(s) 1112
MluCI AATT 5 cut(s) 93, 153, 294, 505, 556
MlyI GAGTC 1 cut(s) 627
MmeI TCCRAC 1 cut(s) 1012
MroNI GCCGGC 1 cut(s) 1135
MroXI GAANNNNTTC 1 cut(s) 71
MseI TTAA 4 cut(s) 168, 372, 399, 839
MslI CAYNNNNRTG 1 cut(s) 1043
MspA1I CMGCKG 1 cut(s) 871
MspI CCGG 6 cut(s) 59, 314, 665, 890, 996, 1136
MspR9I CCNGG 7 cut(s) 59, 314, 665, 758, 997, 1034, 1154
MunI CAATTG 1 cut(s) 294
MvaI CCWGG 3 cut(s) 758, 1034, 1154
MvnI CGCG 1 cut(s) 444
MwoI GCNNNNNNNGC 1 cut(s) 965
NaeI GCCGGC 1 cut(s) 1137
NciI CCSGG 4 cut(s) 59, 314, 665, 997
NdeII GATC 4 cut(s) 412, 634, 751, 1112
NgoMIV GCCGGC 1 cut(s) 1135
NheI GCTAGC 1 cut(s) 1147
NlaIII CATG 1 cut(s) 480
NlaIV GGNNCC 1 cut(s) 897
NmuCI GTSAC 3 cut(s) 981, 1036, 1045
NspI RCATGY 1 cut(s) 480
OliI CACNNNNGTG 1 cut(s) 1043
PaqCI CACCTGC 2 cut(s) 671, 947
PdiI GCCGGC 1 cut(s) 1137
PdmI GAANNNNTTC 1 cut(s) 71
PfeI GAWTC 1 cut(s) 922
PkrI GCNGC 5 cut(s) 49, 606, 870, 873, 1071
PleI GAGTC 1 cut(s) 626
PpsI GAGTC 1 cut(s) 626
Ppu21I YACGTR 1 cut(s) 568
Psp6I CCWGG 3 cut(s) 756, 1032, 1152
PspEI GGTNACC 3 cut(s) 446, 1036, 1045
PspFI CCCAGC 1 cut(s) 864
PspGI CCWGG 3 cut(s) 756, 1032, 1152
PspN4I GGNNCC 1 cut(s) 897
PspPI GGNCC 4 cut(s) 61, 535, 650, 908
PstNI CAGNNNCTG 2 cut(s) 871, 1115
PsuI RGATCY 1 cut(s) 1112
RsaI GTAC 1 cut(s) 254
RsaNI GTAC 1 cut(s) 253
RseI CAYNNNNRTG 1 cut(s) 1043
SalI GTCGAC 1 cut(s) 1129
SaqAI TTAA 4 cut(s) 168, 372, 399, 839
SatI GCNGC 5 cut(s) 48, 605, 869, 872, 1070
Sau3AI GATC 4 cut(s) 412, 634, 751, 1112
Sau96I GGNCC 4 cut(s) 61, 535, 650, 908
SchI GAGTC 1 cut(s) 627
ScrFI CCNGG 7 cut(s) 59, 314, 665, 758, 997, 1034, 1154
SfaNI GCATC 4 cut(s) 511, 562, 771, 802
SinI GGWCC 2 cut(s) 61, 908
SmiMI CAYNNNNRTG 1 cut(s) 1043
SmlI CTYRAG 1 cut(s) 539
SmoI CTYRAG 1 cut(s) 539
Sse9I AATT 5 cut(s) 93, 153, 294, 505, 556
SsiI CCGC 8 cut(s) 202, 444, 463, 480, 726, 869, 959, 971
SspMI CTAG 3 cut(s) 266, 318, 1148
StyD4I CCNGG 7 cut(s) 57, 312, 663, 756, 995, 1032, 1152
TaaI ACNGT 3 cut(s) 498, 586, 1045
TaiI ACGT 2 cut(s) 570, 933
TaqI TCGA 2 cut(s) 562, 1130
TaqII GACCGA 1 cut(s) 819
TasI AATT 5 cut(s) 93, 153, 294, 505, 556
TauI GCSGC 1 cut(s) 871
TfiI GAWTC 1 cut(s) 922
Tru1I TTAA 4 cut(s) 168, 372, 399, 839
Tru9I TTAA 4 cut(s) 168, 372, 399, 839
TscAI CASTG 2 cut(s) 597, 1090
TseFI GTSAC 3 cut(s) 981, 1036, 1045
TseI GCWGC 4 cut(s) 47, 604, 871, 1069
Tsp45I GTSAC 3 cut(s) 981, 1036, 1045
TspDTI ATGAA 3 cut(s) 96, 98, 152
TspGWI ACGGA 2 cut(s) 289, 410
TspRI CASTG 2 cut(s) 597, 1090
VpaK11BI GGWCC 2 cut(s) 61, 908
XapI RAATTY 2 cut(s) 153, 556
XceI RCATGY 1 cut(s) 480
XmiI GTMKAC 1 cut(s) 1130
XmnI GAANNNNTTC 1 cut(s) 71
XspI CTAG 3 cut(s) 266, 318, 1148
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.